Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c116' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6940942-fedora-39-x86_64 --chroot fedora-39-x86_64 Version: 0.70 PID: 9704 Logging PID: 9705 Task: {'appstream': False, 'background': True, 'build_id': 6940942, 'buildroot_pkgs': [], 'chroot': 'fedora-39-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'cb32a12b8cacca661d4d9c2d823ec4e03a6228b7', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/COPASI', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'COPASI', 'package_version': '4.42.284-5', 'project_dirname': 'automatic-obsoletes', 'project_name': 'automatic-obsoletes', 'project_owner': 'torsava', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/torsava/automatic-obsoletes/fedora-39-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'torsava/automatic-obsoletes--https://src.fedoraproject.org/user/releng', 'source_json': {}, 'source_type': None, 'submitter': 'https://src.fedoraproject.org/user/releng', 'tags': [], 'task_id': '6940942-fedora-39-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/COPASI /var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/COPASI', '/var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI'... Running: git checkout cb32a12b8cacca661d4d9c2d823ec4e03a6228b7 -- cmd: ['git', 'checkout', 'cb32a12b8cacca661d4d9c2d823ec4e03a6228b7', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI rc: 0 stdout: stderr: Note: switching to 'cb32a12b8cacca661d4d9c2d823ec4e03a6228b7'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c <new-branch-name> Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at cb32a12 automatic import of COPASI Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated INFO: Reading sources specification file: sources INFO: Downloading COPASI-Build-284.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o COPASI-Build-284.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/torsava/automatic-obsoletes/COPASI/COPASI-Build-284.tar.gz/md5/ef461df70cde8900517de385642ee4ae/COPASI-Build-284.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 25.1M 100 25.1M 0 0 4134k 0 0:00:06 0:00:06 --:--:-- 3180k INFO: Reading stdout from command: md5sum COPASI-Build-284.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1705956480.846328 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.4 starting (python version = 3.11.3, NVR = mock-5.4-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1705956480.846328 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI/COPASI.spec) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.4 INFO: Mock Version: 5.4 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1705956480.846328/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-x86_64-bootstrap-1705956480.846328/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/8ff7ad910417a7b8a49019008335921d2aac0e3304a19ce258deabf431e59801/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/8ff7ad910417a7b8a49019008335921d2aac0e3304a19ce258deabf431e59801/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 49 MB/s | 17 MB 00:00 fedora 1.1 MB/s | 89 MB 01:21 updates 11 MB/s | 29 MB 00:02 Last metadata expiration check: 0:00:03 ago on Mon Jan 22 20:49:49 2024. Package python3-dnf-4.18.1-2.fc39.noarch is already installed. Dependencies resolved. ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: python3-dnf-plugins-core noarch 4.4.4-2.fc39 copr_base 302 k Upgrading: dnf noarch 4.18.2-2.fc39 copr_base 496 k dnf-data noarch 4.18.2-2.fc39 copr_base 40 k python3-dnf noarch 4.18.2-2.fc39 copr_base 550 k yum noarch 4.18.2-2.fc39 copr_base 38 k Installing dependencies: dbus-libs x86_64 1:1.14.10-1.fc39 fedora 156 k python3-dateutil noarch 1:2.8.2-12.fc39 copr_base 345 k python3-dbus x86_64 1.3.2-5.fc39 copr_base 147 k python3-distro noarch 1.9.0-2.fc39 copr_base 46 k python3-six noarch 1.16.0-13.fc39 copr_base 41 k python3-systemd x86_64 235-6.fc39 copr_base 101 k Transaction Summary ================================================================================ Install 7 Packages Upgrade 4 Packages Total download size: 2.2 M Downloading Packages: (1/11): python3-distro-1.9.0-2.fc39.noarch.rpm 611 kB/s | 46 kB 00:00 (2/11): python3-dbus-1.3.2-5.fc39.x86_64.rpm 1.7 MB/s | 147 kB 00:00 (3/11): python3-dateutil-2.8.2-12.fc39.noarch.r 3.9 MB/s | 345 kB 00:00 (4/11): python3-dnf-plugins-core-4.4.4-2.fc39.n 14 MB/s | 302 kB 00:00 (5/11): python3-six-1.16.0-13.fc39.noarch.rpm 3.1 MB/s | 41 kB 00:00 (6/11): python3-systemd-235-6.fc39.x86_64.rpm 6.0 MB/s | 101 kB 00:00 (7/11): dnf-4.18.2-2.fc39.noarch.rpm 6.1 MB/s | 496 kB 00:00 (8/11): dnf-data-4.18.2-2.fc39.noarch.rpm 456 kB/s | 40 kB 00:00 (9/11): python3-dnf-4.18.2-2.fc39.noarch.rpm 9.5 MB/s | 550 kB 00:00 (10/11): yum-4.18.2-2.fc39.noarch.rpm 845 kB/s | 38 kB 00:00 (11/11): dbus-libs-1.14.10-1.fc39.x86_64.rpm 788 kB/s | 156 kB 00:00 -------------------------------------------------------------------------------- Total 6.6 MB/s | 2.2 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : dnf-data-4.18.2-2.fc39.noarch 1/15 Upgrading : python3-dnf-4.18.2-2.fc39.noarch 2/15 Upgrading : dnf-4.18.2-2.fc39.noarch 3/15 Running scriptlet: dnf-4.18.2-2.fc39.noarch 3/15 Installing : dbus-libs-1:1.14.10-1.fc39.x86_64 4/15 Installing : python3-dbus-1.3.2-5.fc39.x86_64 5/15 Installing : python3-systemd-235-6.fc39.x86_64 6/15 Installing : python3-six-1.16.0-13.fc39.noarch 7/15 Installing : python3-dateutil-1:2.8.2-12.fc39.noarch 8/15 Installing : python3-distro-1.9.0-2.fc39.noarch 9/15 Installing : python3-dnf-plugins-core-4.4.4-2.fc39.noarch 10/15 Upgrading : yum-4.18.2-2.fc39.noarch 11/15 Cleanup : yum-4.18.1-2.fc39.noarch 12/15 Running scriptlet: dnf-4.18.1-2.fc39.noarch 13/15 Cleanup : dnf-4.18.1-2.fc39.noarch 13/15 Running scriptlet: dnf-4.18.1-2.fc39.noarch 13/15 Cleanup : python3-dnf-4.18.1-2.fc39.noarch 14/15 Cleanup : dnf-data-4.18.1-2.fc39.noarch 15/15 Running scriptlet: dnf-data-4.18.1-2.fc39.noarch 15/15 Verifying : python3-dateutil-1:2.8.2-12.fc39.noarch 1/15 Verifying : python3-dbus-1.3.2-5.fc39.x86_64 2/15 Verifying : python3-distro-1.9.0-2.fc39.noarch 3/15 Verifying : python3-dnf-plugins-core-4.4.4-2.fc39.noarch 4/15 Verifying : python3-six-1.16.0-13.fc39.noarch 5/15 Verifying : python3-systemd-235-6.fc39.x86_64 6/15 Verifying : dbus-libs-1:1.14.10-1.fc39.x86_64 7/15 Verifying : dnf-4.18.2-2.fc39.noarch 8/15 Verifying : dnf-4.18.1-2.fc39.noarch 9/15 Verifying : dnf-data-4.18.2-2.fc39.noarch 10/15 Verifying : dnf-data-4.18.1-2.fc39.noarch 11/15 Verifying : python3-dnf-4.18.2-2.fc39.noarch 12/15 Verifying : python3-dnf-4.18.1-2.fc39.noarch 13/15 Verifying : yum-4.18.2-2.fc39.noarch 14/15 Verifying : yum-4.18.1-2.fc39.noarch 15/15 Upgraded: dnf-4.18.2-2.fc39.noarch dnf-data-4.18.2-2.fc39.noarch python3-dnf-4.18.2-2.fc39.noarch yum-4.18.2-2.fc39.noarch Installed: dbus-libs-1:1.14.10-1.fc39.x86_64 python3-dateutil-1:2.8.2-12.fc39.noarch python3-dbus-1.3.2-5.fc39.x86_64 python3-distro-1.9.0-2.fc39.noarch python3-dnf-plugins-core-4.4.4-2.fc39.noarch python3-six-1.16.0-13.fc39.noarch python3-systemd-235-6.fc39.x86_64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1705956480.846328/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc39.x86_64 rpm-sequoia-1.5.0-1.fc39.x86_64 python3-dnf-4.18.2-2.fc39.noarch python3-dnf-plugins-core-4.4.4-2.fc39.noarch yum-4.18.2-2.fc39.noarch Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 40 kB/s | 1.5 kB 00:00 Copr repository 53 MB/s | 17 MB 00:00 fedora 653 kB/s | 24 kB 00:00 updates 781 kB/s | 23 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.21-1.fc39 updates 1.8 M bzip2 x86_64 1.0.8-16.fc39 fedora 52 k coreutils x86_64 9.3-4.fc39 fedora 1.1 M cpio x86_64 2.14-4.fc39 fedora 279 k diffutils x86_64 3.10-3.fc39 fedora 398 k fedora-release-common noarch 39-34 updates 19 k findutils x86_64 1:4.9.0-5.fc39 fedora 492 k gawk x86_64 5.2.2-2.fc39 fedora 1.1 M glibc-minimal-langpack x86_64 2.38-14.fc39 updates 70 k grep x86_64 3.11-3.fc39 fedora 298 k gzip x86_64 1.12-6.fc39 fedora 166 k info x86_64 7.0.3-3.fc39 fedora 182 k patch x86_64 2.7.6-22.fc39 fedora 125 k redhat-rpm-config noarch 262-1.fc39 fedora 84 k rpm-build x86_64 4.19.1-3.fc39 copr_base 72 k sed x86_64 4.8-14.fc39 fedora 306 k shadow-utils x86_64 2:4.14.0-2.fc39 updates 1.3 M tar x86_64 2:1.35-2.fc39 fedora 864 k unzip x86_64 6.0-62.fc39 fedora 184 k util-linux x86_64 2.39.3-2.fc39 copr_base 1.1 M which x86_64 2.21-40.fc39 fedora 42 k xz x86_64 5.4.4-1.fc39 fedora 556 k Installing dependencies: alternatives x86_64 1.25-1.fc39 fedora 39 k ansible-srpm-macros noarch 1-11.fc39 fedora 21 k audit-libs x86_64 4.0-2.fc39 copr_base 119 k authselect x86_64 1.4.3-1.fc39 fedora 149 k authselect-libs x86_64 1.4.3-1.fc39 fedora 249 k basesystem noarch 11-18.fc39 fedora 7.2 k binutils x86_64 2.40-13.fc39 fedora 5.6 M binutils-gold x86_64 2.40-13.fc39 fedora 797 k bzip2-libs x86_64 1.0.8-16.fc39 fedora 41 k ca-certificates noarch 2023.2.60_v7.0.306-2.fc39 fedora 837 k coreutils-common x86_64 9.3-4.fc39 fedora 2.1 M cracklib x86_64 2.9.11-2.fc39 fedora 94 k crypto-policies noarch 20231204-1.git1e3a2e4.fc39 updates 100 k curl x86_64 8.2.1-4.fc39 updates 345 k cyrus-sasl-lib x86_64 2.1.28-11.fc39 fedora 793 k debugedit x86_64 5.0-12.fc39 updates 79 k dwz x86_64 0.15-3.fc39 fedora 134 k ed x86_64 1.19-4.fc39 fedora 79 k efi-srpm-macros noarch 5-9.fc39 fedora 22 k elfutils x86_64 0.190-4.fc39 updates 551 k elfutils-debuginfod-client x86_64 0.190-4.fc39 updates 38 k elfutils-default-yama-scope noarch 0.190-4.fc39 updates 13 k elfutils-libelf x86_64 0.190-4.fc39 updates 194 k elfutils-libs x86_64 0.190-4.fc39 updates 260 k fedora-gpg-keys noarch 39-1 fedora 130 k fedora-release noarch 39-34 updates 8.4 k fedora-release-identity-basic noarch 39-34 updates 9.2 k fedora-repos noarch 39-1 fedora 9.3 k file x86_64 5.45-2.fc39 copr_base 50 k file-libs x86_64 5.45-2.fc39 copr_base 764 k filesystem x86_64 3.18-6.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k gdb-minimal x86_64 14.1-2.fc39 updates 4.3 M gdbm-libs x86_64 1:1.23-4.fc39 fedora 56 k ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k glibc x86_64 2.38-14.fc39 updates 2.2 M glibc-common x86_64 2.38-14.fc39 updates 352 k glibc-gconv-extra x86_64 2.38-14.fc39 updates 1.6 M gmp x86_64 1:6.2.1-5.fc39 fedora 313 k gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k go-srpm-macros noarch 3.3.1-1.fc39 updates 28 k jansson x86_64 2.13.1-7.fc39 fedora 44 k kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k keyutils-libs x86_64 1.6.1-7.fc39 fedora 31 k krb5-libs x86_64 1.21.2-2.fc39 updates 764 k libacl x86_64 2.3.1-9.fc39 updates 23 k libarchive x86_64 3.7.1-1.fc39 fedora 408 k libattr x86_64 2.5.1-8.fc39 fedora 18 k libblkid x86_64 2.39.3-2.fc39 copr_base 117 k libbrotli x86_64 1.1.0-2.fc39 copr_base 336 k libcap x86_64 2.48-9.fc39 updates 68 k libcap-ng x86_64 0.8.4-3.fc39 copr_base 33 k libcom_err x86_64 1.47.0-2.fc39 fedora 26 k libcurl x86_64 8.2.1-4.fc39 updates 323 k libdb x86_64 5.3.28-56.fc39 fedora 760 k libeconf x86_64 0.5.2-1.fc39 fedora 30 k libevent x86_64 2.1.12-9.fc39 fedora 258 k libfdisk x86_64 2.39.3-2.fc39 copr_base 163 k libffi x86_64 3.4.4-4.fc39 fedora 40 k libgcc x86_64 13.2.1-6.fc39 updates 112 k libgomp x86_64 13.2.1-6.fc39 updates 322 k libidn2 x86_64 2.3.4-3.fc39 fedora 117 k libmount x86_64 2.39.3-2.fc39 copr_base 155 k libnghttp2 x86_64 1.55.1-4.fc39 updates 76 k libnsl2 x86_64 2.0.0-6.fc39 fedora 30 k libpkgconf x86_64 1.9.5-2.fc39 fedora 38 k libpsl x86_64 0.21.2-4.fc39 fedora 63 k libpwquality x86_64 1.4.5-8.fc39 copr_base 108 k libselinux x86_64 3.5-5.fc39 copr_base 87 k libsemanage x86_64 3.5-4.fc39 copr_base 120 k libsepol x86_64 3.5-2.fc39 fedora 324 k libsigsegv x86_64 2.14-5.fc39 fedora 27 k libsmartcols x86_64 2.39.3-2.fc39 copr_base 68 k libssh x86_64 0.10.6-2.fc39 updates 212 k libssh-config noarch 0.10.6-2.fc39 updates 9.0 k libstdc++ x86_64 13.2.1-6.fc39 updates 865 k libtasn1 x86_64 4.19.0-3.fc39 fedora 74 k libtirpc x86_64 1.3.4-0.rc2.fc39 updates 94 k libunistring x86_64 1.1-5.fc39 fedora 543 k libutempter x86_64 1.2.1-10.fc39 fedora 26 k libuuid x86_64 2.39.3-2.fc39 copr_base 29 k libverto x86_64 0.3.2-6.fc39 fedora 20 k libxcrypt x86_64 4.4.36-2.fc39 fedora 119 k libxml2 x86_64 2.12.4-2.fc39 copr_base 694 k libzstd x86_64 1.5.5-4.fc39 fedora 309 k lua-libs x86_64 5.4.6-3.fc39 fedora 133 k lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k lz4-libs x86_64 1.9.4-4.fc39 fedora 67 k mpfr x86_64 4.2.0-3.fc39 fedora 344 k ncurses-base noarch 6.4-7.20230520.fc39 fedora 88 k ncurses-libs x86_64 6.4-7.20230520.fc39 fedora 336 k ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k openldap x86_64 2.6.6-1.fc39 fedora 255 k openssl-libs x86_64 1:3.1.1-4.fc39 fedora 2.2 M p11-kit x86_64 0.25.3-1.fc39 updates 520 k p11-kit-trust x86_64 0.25.3-1.fc39 updates 140 k package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k pam x86_64 1.5.3-3.fc39 updates 542 k pam-libs x86_64 1.5.3-3.fc39 updates 56 k pcre2 x86_64 10.42-1.fc39.2 fedora 233 k pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k pkgconf x86_64 1.9.5-2.fc39 fedora 42 k pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k pkgconf-pkg-config x86_64 1.9.5-2.fc39 fedora 9.6 k popt x86_64 1.19-3.fc39 fedora 66 k publicsuffix-list-dafsa noarch 20240107-1.fc39 updates 58 k pyproject-srpm-macros noarch 1.11.0-1.fc39 updates 15 k python-srpm-macros noarch 3.12-4.fc39 fedora 25 k qt5-srpm-macros noarch 5.15.11-1.fc39 updates 8.3 k qt6-srpm-macros noarch 6.6.0-1.fc39 updates 8.6 k readline x86_64 8.2-4.fc39 fedora 213 k rpm x86_64 4.19.1-3.fc39 copr_base 511 k rpm-build-libs x86_64 4.19.1-3.fc39 copr_base 96 k rpm-libs x86_64 4.19.1-3.fc39 copr_base 313 k rpm-sequoia x86_64 1.5.0-2.fc39 updates 878 k rpmautospec-rpm-macros noarch 0.4.1-2.fc39 copr_base 9.8 k rust-srpm-macros noarch 25.2-2.fc39 copr_base 13 k setup noarch 2.14.4-1.fc39 fedora 154 k sqlite-libs x86_64 3.42.0-7.fc39 fedora 678 k systemd-libs x86_64 254.7-1.fc39 updates 689 k util-linux-core x86_64 2.39.3-2.fc39 copr_base 493 k xxhash-libs x86_64 0.8.2-1.fc39 fedora 37 k xz-libs x86_64 5.4.4-1.fc39 fedora 108 k zip x86_64 3.0-39.fc39 fedora 266 k zlib x86_64 1.2.13-4.fc39 fedora 94 k zstd x86_64 1.5.5-4.fc39 fedora 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 151 Packages Total size: 52 M Installed size: 179 M Downloading Packages: [SKIPPED] audit-libs-4.0-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] file-5.45-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] file-libs-5.45-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libblkid-2.39.3-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libbrotli-1.1.0-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libcap-ng-0.8.4-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] libfdisk-2.39.3-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libmount-2.39.3-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libpwquality-1.4.5-8.fc39.x86_64.rpm: Already downloaded [SKIPPED] libselinux-3.5-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] libsemanage-3.5-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] libsmartcols-2.39.3-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libuuid-2.39.3-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libxml2-2.12.4-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] 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systemd-libs-254.7-1.fc39.x86_64.rpm: Already downloaded fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) <fedora-39-primary@fedoraproject.org>" Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.2.1-6.fc39.x86_64 1/151 Running scriptlet: libgcc-13.2.1-6.fc39.x86_64 1/151 Installing : crypto-policies-20231204-1.git1e3a2e4.fc39.noarc 2/151 Running scriptlet: crypto-policies-20231204-1.git1e3a2e4.fc39.noarc 2/151 Installing : fedora-release-identity-basic-39-34.noarch 3/151 Installing : fedora-gpg-keys-39-1.noarch 4/151 Installing : fedora-repos-39-1.noarch 5/151 Installing : fedora-release-common-39-34.noarch 6/151 Installing : fedora-release-39-34.noarch 7/151 Installing : setup-2.14.4-1.fc39.noarch 8/151 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.4-1.fc39.noarch 8/151 Installing : filesystem-3.18-6.fc39.x86_64 9/151 Installing : basesystem-11-18.fc39.noarch 10/151 Installing : qt6-srpm-macros-6.6.0-1.fc39.noarch 11/151 Installing : qt5-srpm-macros-5.15.11-1.fc39.noarch 12/151 Installing : 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67/151 Installing : xz-5.4.4-1.fc39.x86_64 68/151 Installing : libmount-2.39.3-2.fc39.x86_64 69/151 Installing : util-linux-core-2.39.3-2.fc39.x86_64 70/151 Installing : libsemanage-3.5-4.fc39.x86_64 71/151 Installing : shadow-utils-2:4.14.0-2.fc39.x86_64 72/151 Running scriptlet: libutempter-1.2.1-10.fc39.x86_64 73/151 Installing : libutempter-1.2.1-10.fc39.x86_64 73/151 Installing : tar-2:1.35-2.fc39.x86_64 74/151 Installing : libpsl-0.21.2-4.fc39.x86_64 75/151 Installing : zip-3.0-39.fc39.x86_64 76/151 Installing : zstd-1.5.5-4.fc39.x86_64 77/151 Installing : libfdisk-2.39.3-2.fc39.x86_64 78/151 Installing : bzip2-1.0.8-16.fc39.x86_64 79/151 Installing : libxml2-2.12.4-2.fc39.x86_64 80/151 Installing : sqlite-libs-3.42.0-7.fc39.x86_64 81/151 Installing : libbrotli-1.1.0-2.fc39.x86_64 82/151 Installing : cpio-2.14-4.fc39.x86_64 83/151 Installing : diffutils-3.10-3.fc39.x86_64 84/151 Installing : ed-1.19-4.fc39.x86_64 85/151 Installing : patch-2.7.6-22.fc39.x86_64 86/151 Installing : gdbm-libs-1:1.23-4.fc39.x86_64 87/151 Installing : cyrus-sasl-lib-2.1.28-11.fc39.x86_64 88/151 Installing : keyutils-libs-1.6.1-7.fc39.x86_64 89/151 Installing : libdb-5.3.28-56.fc39.x86_64 90/151 Installing : libffi-3.4.4-4.fc39.x86_64 91/151 Installing : p11-kit-0.25.3-1.fc39.x86_64 92/151 Installing : p11-kit-trust-0.25.3-1.fc39.x86_64 93/151 Running scriptlet: p11-kit-trust-0.25.3-1.fc39.x86_64 93/151 Installing : libpkgconf-1.9.5-2.fc39.x86_64 94/151 Installing : pkgconf-1.9.5-2.fc39.x86_64 95/151 Installing : pkgconf-pkg-config-1.9.5-2.fc39.x86_64 96/151 Installing : libsigsegv-2.14-5.fc39.x86_64 97/151 Installing : gawk-5.2.2-2.fc39.x86_64 98/151 Installing : libverto-0.3.2-6.fc39.x86_64 99/151 Installing : xxhash-libs-0.8.2-1.fc39.x86_64 100/151 Installing : libgomp-13.2.1-6.fc39.x86_64 101/151 Installing : libnghttp2-1.55.1-4.fc39.x86_64 102/151 Installing : elfutils-default-yama-scope-0.190-4.fc39.noarch 103/151 Running scriptlet: elfutils-default-yama-scope-0.190-4.fc39.noarch 103/151 Installing : kernel-srpm-macros-1.0-20.fc39.noarch 104/151 Installing : gnat-srpm-macros-6-3.fc39.noarch 105/151 Installing : ghc-srpm-macros-1.6.1-2.fc39.noarch 106/151 Installing : fpc-srpm-macros-1.3-8.fc39.noarch 107/151 Installing : coreutils-common-9.3-4.fc39.x86_64 108/151 Installing : openssl-libs-1:3.1.1-4.fc39.x86_64 109/151 Installing : coreutils-9.3-4.fc39.x86_64 110/151 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 111/151 Installing : ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 111/151 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 111/151 Installing : krb5-libs-1.21.2-2.fc39.x86_64 112/151 Installing : libtirpc-1.3.4-0.rc2.fc39.x86_64 113/151 Running scriptlet: authselect-libs-1.4.3-1.fc39.x86_64 114/151 Installing : authselect-libs-1.4.3-1.fc39.x86_64 114/151 Installing : gzip-1.12-6.fc39.x86_64 115/151 Installing : cracklib-2.9.11-2.fc39.x86_64 116/151 Installing : libpwquality-1.4.5-8.fc39.x86_64 117/151 Installing : authselect-1.4.3-1.fc39.x86_64 118/151 Installing : libnsl2-2.0.0-6.fc39.x86_64 119/151 Installing : pam-1.5.3-3.fc39.x86_64 120/151 Installing : libssh-0.10.6-2.fc39.x86_64 121/151 Installing : libarchive-3.7.1-1.fc39.x86_64 122/151 Installing : libevent-2.1.12-9.fc39.x86_64 123/151 Installing : openldap-2.6.6-1.fc39.x86_64 124/151 Installing : libcurl-8.2.1-4.fc39.x86_64 125/151 Installing : elfutils-libs-0.190-4.fc39.x86_64 126/151 Installing : elfutils-debuginfod-client-0.190-4.fc39.x86_64 127/151 Installing : binutils-gold-2.40-13.fc39.x86_64 128/151 Running scriptlet: binutils-gold-2.40-13.fc39.x86_64 128/151 Installing : binutils-2.40-13.fc39.x86_64 129/151 Running scriptlet: binutils-2.40-13.fc39.x86_64 129/151 Installing : elfutils-0.190-4.fc39.x86_64 130/151 Installing : gdb-minimal-14.1-2.fc39.x86_64 131/151 Installing : debugedit-5.0-12.fc39.x86_64 132/151 Installing : curl-8.2.1-4.fc39.x86_64 133/151 Installing : rpm-sequoia-1.5.0-2.fc39.x86_64 134/151 Installing : rpm-libs-4.19.1-3.fc39.x86_64 135/151 Running scriptlet: rpm-4.19.1-3.fc39.x86_64 136/151 Installing : rpm-4.19.1-3.fc39.x86_64 136/151 Installing : rpmautospec-rpm-macros-0.4.1-2.fc39.noarch 137/151 Installing : efi-srpm-macros-5-9.fc39.noarch 138/151 Installing : lua-srpm-macros-1-9.fc39.noarch 139/151 Installing : rpm-build-libs-4.19.1-3.fc39.x86_64 140/151 Installing : ansible-srpm-macros-1-11.fc39.noarch 141/151 Installing : rust-srpm-macros-25.2-2.fc39.noarch 142/151 Installing : pyproject-srpm-macros-1.11.0-1.fc39.noarch 143/151 Installing : rpm-build-4.19.1-3.fc39.x86_64 144/151 Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 145/151 Installing : python-srpm-macros-3.12-4.fc39.noarch 146/151 Installing : go-srpm-macros-3.3.1-1.fc39.noarch 147/151 Installing : redhat-rpm-config-262-1.fc39.noarch 148/151 Installing : util-linux-2.39.3-2.fc39.x86_64 149/151 Installing : which-2.21-40.fc39.x86_64 150/151 Installing : info-7.0.3-3.fc39.x86_64 151/151 Running scriptlet: filesystem-3.18-6.fc39.x86_64 151/151 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 151/151 Running scriptlet: authselect-libs-1.4.3-1.fc39.x86_64 151/151 Running scriptlet: rpm-4.19.1-3.fc39.x86_64 151/151 Running scriptlet: info-7.0.3-3.fc39.x86_64 151/151 Installed: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-4.0-2.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.21-1.fc39.x86_64 binutils-2.40-13.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-4.fc39.x86_64 coreutils-common-9.3-4.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231204-1.git1e3a2e4.fc39.noarch curl-8.2.1-4.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-12.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc39.x86_64 elfutils-debuginfod-client-0.190-4.fc39.x86_64 elfutils-default-yama-scope-0.190-4.fc39.noarch elfutils-libelf-0.190-4.fc39.x86_64 elfutils-libs-0.190-4.fc39.x86_64 fedora-gpg-keys-39-1.noarch fedora-release-39-34.noarch fedora-release-common-39-34.noarch fedora-release-identity-basic-39-34.noarch fedora-repos-39-1.noarch file-5.45-2.fc39.x86_64 file-libs-5.45-2.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-1:4.9.0-5.fc39.x86_64 fonts-srpm-macros-1:2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-14.1-2.fc39.x86_64 gdbm-libs-1:1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-14.fc39.x86_64 glibc-common-2.38-14.fc39.x86_64 glibc-gconv-extra-2.38-14.fc39.x86_64 glibc-minimal-langpack-2.38-14.fc39.x86_64 gmp-1:6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc39.noarch grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-2.fc39.x86_64 libacl-2.3.1-9.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.3-2.fc39.x86_64 libbrotli-1.1.0-2.fc39.x86_64 libcap-2.48-9.fc39.x86_64 libcap-ng-0.8.4-3.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-4.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-1.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.3-2.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-6.fc39.x86_64 libgomp-13.2.1-6.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.3-2.fc39.x86_64 libnghttp2-1.55.1-4.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-8.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.3-2.fc39.x86_64 libssh-0.10.6-2.fc39.x86_64 libssh-config-0.10.6-2.fc39.noarch libstdc++-13.2.1-6.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.4-0.rc2.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.3-2.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.12.4-2.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.noarch ncurses-libs-6.4-7.20230520.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-1:3.1.1-4.fc39.x86_64 p11-kit-0.25.3-1.fc39.x86_64 p11-kit-trust-0.25.3-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20240107-1.fc39.noarch pyproject-srpm-macros-1.11.0-1.fc39.noarch python-srpm-macros-3.12-4.fc39.noarch qt5-srpm-macros-5.15.11-1.fc39.noarch qt6-srpm-macros-6.6.0-1.fc39.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch rpm-4.19.1-3.fc39.x86_64 rpm-build-4.19.1-3.fc39.x86_64 rpm-build-libs-4.19.1-3.fc39.x86_64 rpm-libs-4.19.1-3.fc39.x86_64 rpm-sequoia-1.5.0-2.fc39.x86_64 rpmautospec-rpm-macros-0.4.1-2.fc39.noarch rust-srpm-macros-25.2-2.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-2:4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.7-1.fc39.x86_64 tar-2:1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.3-2.fc39.x86_64 util-linux-core-2.39.3-2.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-4.0-2.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.21-1.fc39.x86_64 binutils-2.40-13.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-4.fc39.x86_64 coreutils-common-9.3-4.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231204-1.git1e3a2e4.fc39.noarch curl-8.2.1-4.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-12.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc39.x86_64 elfutils-debuginfod-client-0.190-4.fc39.x86_64 elfutils-default-yama-scope-0.190-4.fc39.noarch elfutils-libelf-0.190-4.fc39.x86_64 elfutils-libs-0.190-4.fc39.x86_64 fedora-gpg-keys-39-1.noarch fedora-release-39-34.noarch fedora-release-common-39-34.noarch fedora-release-identity-basic-39-34.noarch fedora-repos-39-1.noarch file-5.45-2.fc39.x86_64 file-libs-5.45-2.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-4.9.0-5.fc39.x86_64 fonts-srpm-macros-2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-14.1-2.fc39.x86_64 gdbm-libs-1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-14.fc39.x86_64 glibc-common-2.38-14.fc39.x86_64 glibc-gconv-extra-2.38-14.fc39.x86_64 glibc-minimal-langpack-2.38-14.fc39.x86_64 gmp-6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc39.noarch gpg-pubkey-18b8e74c-62f2920f grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-2.fc39.x86_64 libacl-2.3.1-9.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.3-2.fc39.x86_64 libbrotli-1.1.0-2.fc39.x86_64 libcap-2.48-9.fc39.x86_64 libcap-ng-0.8.4-3.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-4.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-1.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.3-2.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-6.fc39.x86_64 libgomp-13.2.1-6.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.3-2.fc39.x86_64 libnghttp2-1.55.1-4.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-8.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.3-2.fc39.x86_64 libssh-0.10.6-2.fc39.x86_64 libssh-config-0.10.6-2.fc39.noarch libstdc++-13.2.1-6.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.4-0.rc2.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.3-2.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.12.4-2.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.noarch ncurses-libs-6.4-7.20230520.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-3.1.1-4.fc39.x86_64 p11-kit-0.25.3-1.fc39.x86_64 p11-kit-trust-0.25.3-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20240107-1.fc39.noarch pyproject-srpm-macros-1.11.0-1.fc39.noarch python-srpm-macros-3.12-4.fc39.noarch qt5-srpm-macros-5.15.11-1.fc39.noarch qt6-srpm-macros-6.6.0-1.fc39.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch rpm-4.19.1-3.fc39.x86_64 rpm-build-4.19.1-3.fc39.x86_64 rpm-build-libs-4.19.1-3.fc39.x86_64 rpm-libs-4.19.1-3.fc39.x86_64 rpm-sequoia-1.5.0-2.fc39.x86_64 rpmautospec-rpm-macros-0.4.1-2.fc39.noarch rust-srpm-macros-25.2-2.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.7-1.fc39.x86_64 tar-1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.3-2.fc39.x86_64 util-linux-core-2.39.3-2.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Start: buildsrpm Start: rpmbuild -bs sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6', required by 'virtual:world', not found Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1705881600 Wrote: /builddir/build/SRPMS/COPASI-4.42.284-5.fc39.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1705956480.846328/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1705956480.846328/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1705956480.846328/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-6ph1iy9n/COPASI/COPASI.spec) Config(child) 2 minutes 26 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/COPASI-4.42.284-5.fc39.src.rpm) Config(fedora-39-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1705956480.846328/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1705956480.846328/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1705956480.846328/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc39.x86_64 rpm-sequoia-1.5.0-1.fc39.x86_64 python3-dnf-4.18.2-2.fc39.noarch python3-dnf-plugins-core-4.4.4-2.fc39.noarch yum-4.18.2-2.fc39.noarch Finish: chroot init Start: build phase for COPASI-4.42.284-5.fc39.src.rpm Start: build setup for COPASI-4.42.284-5.fc39.src.rpm sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6', required by 'virtual:world', not found Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1705881600 Wrote: /builddir/build/SRPMS/COPASI-4.42.284-5.fc39.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 38 kB/s | 1.5 kB 00:00 fedora 752 kB/s | 24 kB 00:00 updates 712 kB/s | 23 kB 00:00 Package pkgconf-pkg-config-1.9.5-2.fc39.x86_64 is already installed. Dependencies resolved. ================================================================================================== Package Arch Version Repo Size ================================================================================================== Installing: ImageMagick x86_64 1:7.1.1.15-1.fc39 fedora 82 k bison x86_64 3.8.2-5.fc39 fedora 1.0 M bzip2-devel x86_64 1.0.8-16.fc39 fedora 214 k cmake x86_64 3.27.7-1.fc39 fedora 8.0 M cppunit-devel x86_64 1.15.1-17.fc39 fedora 70 k crossguid2-devel x86_64 0.2.2-15.20190529gitca1bf4b.fc39 fedora 13 k desktop-file-utils x86_64 0.26-9.fc39 fedora 72 k expat-devel x86_64 2.5.0-3.fc39 fedora 52 k f2c x86_64 20210928-6.fc39 fedora 320 k flex x86_64 2.6.4-13.fc39 fedora 312 k flexiblas-devel x86_64 3.4.1-1.fc39 updates 117 k freeglut-devel x86_64 3.4.0-4.fc39 fedora 945 k gcc x86_64 13.2.1-6.fc39 updates 34 M gcc-c++ x86_64 13.2.1-6.fc39 updates 13 M google-cpu_features-devel x86_64 0.7.0-4.fc39 fedora 16 k libCombine-devel x86_64 0.2.20-4.fc39 copr_base 55 k libappstream-glib x86_64 0.8.2-4.fc39 fedora 409 k libcurl-devel x86_64 8.2.1-4.fc39 updates 998 k libmml-qt5-devel x86_64 2.4-18.20210516git7ad58fac.fc39 fedora 10 k libnuml-devel x86_64 1.1.4-12.fc39 copr_base 51 k libnuml-static x86_64 1.1.4-12.fc39 copr_base 113 k libsbml-devel x86_64 5.19.0-29.fc39 copr_base 3.6 M libsbw-devel x86_64 2.12.2-13.fc39 fedora 72 k libsedml-devel x86_64 2:2.0.32-8.fc39 copr_base 156 k libxslt-devel x86_64 1.1.39-1.fc39 updates 140 k mesa-libGL-devel x86_64 23.3.3-1.fc39 updates 36 k mesa-libGLU-devel x86_64 9.0.3-1.fc39 fedora 12 k minizip-ng-devel x86_64 3.0.7-5.fc39 updates 30 k nativejit-devel x86_64 0.1-7.fc39 fedora 80 k python3-devel x86_64 3.12.1-2.fc39 updates 312 k python3-setuptools noarch 68.2.2-2.fc39 copr_base 1.4 M qcustomplot-qt5-devel x86_64 2.1.1-6.fc39 fedora 55 k qt5-qtbase-devel x86_64 5.15.11-7.fc39 updates 3.5 M qt5-qtdatavis3d-devel x86_64 5.15.11-1.fc39 updates 100 k qt5-qtwebkit-devel x86_64 5.212.0-0.79alpha4.fc39 updates 71 k qwt-qt5-devel x86_64 6.2.0-3.fc39 fedora 171 k qwtplot3d-qt5-devel x86_64 1:0.3.0-5.20210828gitb265574.fc39 fedora 135 k raptor-devel x86_64 1.4.21-41.fc39 fedora 146 k swig x86_64 4.1.1-9.fc39 fedora 1.6 M zipper-devel x86_64 1.0.3-6.fc39 fedora 24 k Installing dependencies: ImageMagick-libs x86_64 1:7.1.1.15-1.fc39 fedora 2.5 M LibRaw x86_64 0.21.2-2.fc39 updates 418 k abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k adobe-mappings-cmap noarch 20230622-1.fc39 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20230622-1.fc39 fedora 113 k adobe-mappings-pdf noarch 20190401-5.fc39 fedora 698 k alsa-lib x86_64 1.2.10-3.fc39 fedora 522 k annobin-docs noarch 12.35-1.fc39 updates 90 k annobin-plugin-gcc x86_64 12.35-1.fc39 updates 957 k avahi-libs x86_64 0.8-24.fc39 fedora 67 k cairo x86_64 1.18.0-1.fc39 fedora 710 k cairo-gobject x86_64 1.18.0-1.fc39 fedora 19 k cdparanoia-libs x86_64 10.2-42.fc39 fedora 54 k cmake-data noarch 3.27.7-1.fc39 fedora 2.2 M cmake-filesystem x86_64 3.27.7-1.fc39 fedora 19 k cmake-rpm-macros noarch 3.27.7-1.fc39 fedora 18 k cpp x86_64 13.2.1-6.fc39 updates 11 M cppunit x86_64 1.15.1-17.fc39 fedora 142 k crossguid2 x86_64 0.2.2-15.20190529gitca1bf4b.fc39 fedora 20 k crypto-policies-scripts noarch 20231204-1.git1e3a2e4.fc39 updates 117 k cups-libs x86_64 1:2.4.7-5.fc39 updates 268 k dbus-libs x86_64 1:1.14.10-1.fc39 fedora 156 k default-fonts-core-sans noarch 4.0-9.fc39 fedora 32 k double-conversion x86_64 3.1.5-9.fc39 fedora 49 k duktape x86_64 2.7.0-5.fc39 fedora 170 k emacs-filesystem noarch 1:29.1-2.fc39 fedora 7.1 k expat x86_64 2.5.0-3.fc39 fedora 110 k f2c-libs x86_64 20210928-6.fc39 fedora 64 k fftw-libs-double x86_64 3.3.10-7.fc39 fedora 1.2 M flexiblas x86_64 3.4.1-1.fc39 updates 25 k flexiblas-netlib x86_64 3.4.1-1.fc39 updates 3.1 M flexiblas-netlib64 x86_64 3.4.1-1.fc39 updates 3.0 M flexiblas-openblas-openmp x86_64 3.4.1-1.fc39 updates 17 k flexiblas-openblas-openmp64 x86_64 3.4.1-1.fc39 updates 17 k fontconfig x86_64 2.14.2-5.fc39 fedora 297 k fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k freeglut x86_64 3.4.0-4.fc39 fedora 154 k freetype x86_64 2.13.1-2.fc39 fedora 414 k fribidi x86_64 1.0.13-2.fc39 fedora 91 k gc x86_64 8.2.2-4.fc39 fedora 110 k gcc-plugin-annobin x86_64 13.2.1-6.fc39 updates 50 k gd x86_64 2.3.3-12.fc39 fedora 139 k gdk-pixbuf2 x86_64 2.42.10-5.fc39 fedora 484 k gl-manpages noarch 1.1-28.20190306.fc39 fedora 1.2 M gl2ps x86_64 1.4.2-8.fc39 fedora 64 k glib2 x86_64 2.78.3-1.fc39 updates 2.8 M glibc-devel x86_64 2.38-14.fc39 updates 84 k glibc-headers-x86 noarch 2.38-14.fc39 updates 568 k glx-utils x86_64 9.0.0-3.fc39 fedora 77 k gnutls x86_64 3.8.2-2.fc39 updates 1.1 M google-cpu_features x86_64 0.7.0-4.fc39 fedora 36 k google-droid-sans-fonts noarch 20200215-17.fc39 fedora 2.7 M google-noto-fonts-common noarch 20230801-4.fc39 updates 17 k google-noto-sans-vf-fonts noarch 20230801-4.fc39 updates 583 k graphene x86_64 1.10.6-6.fc39 fedora 61 k graphite2 x86_64 1.3.14-12.fc39 fedora 95 k graphviz x86_64 9.0.0-8.fc39 copr_base 5.0 M groff-base x86_64 1.23.0-3.fc39 updates 1.1 M gstreamer1 x86_64 1.22.8-1.fc39 updates 1.4 M gstreamer1-plugins-base x86_64 1.22.8-1.fc39 updates 2.2 M gts x86_64 0.7.6-46.20121130.fc39 fedora 240 k guile22 x86_64 2.2.7-9.fc39 fedora 6.5 M harfbuzz x86_64 8.2.1-2.fc39 fedora 975 k highway x86_64 1.0.7-1.fc39 fedora 478 k hwdata noarch 0.378-1.fc39 updates 1.6 M hyphen x86_64 2.8.8-21.fc39 fedora 29 k imath x86_64 3.1.9-5.fc39 copr_base 97 k iso-codes noarch 4.15.0-2.fc39 fedora 3.5 M jasper-libs x86_64 3.0.6-4.fc39 fedora 162 k jbig2dec-libs x86_64 0.19-10.fc39 fedora 73 k jbigkit-libs x86_64 2.1-26.fc39 fedora 53 k json-glib x86_64 1.8.0-1.fc39 fedora 166 k jsoncpp x86_64 1.9.5-5.fc39 fedora 99 k kernel-headers x86_64 6.6.3-200.fc39 updates 1.6 M lasi x86_64 1.1.3-11.fc39 fedora 54 k lcms2 x86_64 2.15-2.fc39 fedora 177 k libCombine x86_64 0.2.20-4.fc39 copr_base 143 k libICE x86_64 1.0.10-11.fc39 fedora 70 k libSM x86_64 1.2.3-13.fc39 fedora 41 k libX11 x86_64 1.8.7-1.fc39 fedora 650 k libX11-common noarch 1.8.7-1.fc39 fedora 176 k libX11-devel x86_64 1.8.7-1.fc39 fedora 1.0 M libX11-xcb x86_64 1.8.7-1.fc39 fedora 12 k libXau x86_64 1.0.11-3.fc39 fedora 31 k libXau-devel x86_64 1.0.11-3.fc39 fedora 14 k libXext x86_64 1.3.5-3.fc39 fedora 39 k libXfixes x86_64 6.0.0-6.fc39 fedora 19 k libXft x86_64 2.3.8-3.fc39 fedora 72 k libXi x86_64 1.8.1-2.fc39 fedora 40 k libXpm x86_64 3.5.17-1.fc39 updates 65 k libXrender x86_64 0.9.11-3.fc39 fedora 27 k libXt x86_64 1.2.1-5.fc39 fedora 178 k libXv x86_64 1.0.11-19.fc39 fedora 18 k libXxf86vm x86_64 1.1.5-3.fc39 fedora 18 k libaom x86_64 3.8.0-1.fc39 updates 1.8 M libavif x86_64 0.11.1-11.fc39 fedora 84 k libb2 x86_64 0.98.1-9.fc39 fedora 25 k libdatrie x86_64 0.2.13-7.fc39 fedora 32 k libdav1d x86_64 1.2.1-2.fc39 fedora 618 k libdrm x86_64 2.4.120-1.fc39 updates 157 k libdrm-devel x86_64 2.4.120-1.fc39 updates 179 k libevdev x86_64 1.13.1-2.fc39 fedora 44 k libgfortran x86_64 13.2.1-6.fc39 updates 907 k libglvnd x86_64 1:1.7.0-1.fc39 fedora 133 k libglvnd-core-devel x86_64 1:1.7.0-1.fc39 fedora 17 k libglvnd-devel x86_64 1:1.7.0-1.fc39 fedora 162 k libglvnd-egl x86_64 1:1.7.0-1.fc39 fedora 36 k libglvnd-gles x86_64 1:1.7.0-1.fc39 fedora 31 k libglvnd-glx x86_64 1:1.7.0-1.fc39 fedora 142 k libglvnd-opengl x86_64 1:1.7.0-1.fc39 fedora 42 k libgpg-error x86_64 1.47-2.fc39 fedora 230 k libgpg-error-devel x86_64 1.47-2.fc39 fedora 67 k libgs x86_64 10.02.1-2.fc39 updates 3.4 M libgudev x86_64 238-2.fc39 fedora 35 k libheif x86_64 1.17.5-1.fc39 updates 352 k libicu x86_64 73.2-2.fc39 fedora 11 M libijs x86_64 0.35-19.fc39 fedora 29 k libimagequant x86_64 4.0.3-2.fc39 updates 318 k libinput x86_64 1.24.0-1.fc39 fedora 214 k libjpeg-turbo x86_64 2.1.4-3.fc39 fedora 183 k libjxl x86_64 1:0.8.2-3.fc39 fedora 1.2 M liblerc x86_64 4.0.0-4.fc39 fedora 201 k liblqr-1 x86_64 0.4.2-22.fc39 fedora 49 k libmml-qt5 x86_64 2.4-18.20210516git7ad58fac.fc39 fedora 81 k libmpc x86_64 1.3.1-3.fc39 fedora 70 k libnuml x86_64 1.1.4-12.fc39 copr_base 92 k libogg x86_64 2:1.3.5-6.fc39 fedora 33 k libpaper x86_64 1:2.1.1-1.fc39 fedora 27 k libpciaccess x86_64 0.16-9.fc39 fedora 26 k libpciaccess-devel x86_64 0.16-9.fc39 fedora 12 k libpng x86_64 2:1.6.37-15.fc39 fedora 119 k libproxy x86_64 0.5.3-4.fc39 copr_base 49 k libquadmath x86_64 13.2.1-6.fc39 updates 197 k libraqm x86_64 0.8.0-5.fc39 fedora 20 k librsvg2 x86_64 2.57.1-1.fc39 updates 1.6 M libsbml x86_64 5.19.0-29.fc39 copr_base 2.3 M libsbw x86_64 2.12.2-13.fc39 fedora 386 k libsedml x86_64 2:2.0.32-8.fc39 copr_base 473 k libstdc++-devel x86_64 13.2.1-6.fc39 updates 2.6 M libstemmer x86_64 2.2.0-7.fc39 fedora 171 k libthai x86_64 0.1.29-6.fc39 fedora 213 k libtheora x86_64 1:1.1.1-34.fc39 fedora 166 k libtiff x86_64 4.4.0-8.fc39 fedora 202 k libtool-ltdl x86_64 2.4.7-7.fc39 fedora 36 k libunwind x86_64 1.7.0-0.2.rc2.fc39 fedora 70 k libuuid-devel x86_64 2.39.3-2.fc39 copr_base 25 k libuv x86_64 1:1.47.0-3.fc39 updates 250 k libvisual x86_64 1:0.4.1-2.fc39 fedora 151 k libvmaf x86_64 2.3.0-6.fc39 fedora 180 k libvorbis x86_64 1:1.3.7-8.fc39 fedora 195 k libwacom x86_64 2.9.0-1.fc39 updates 43 k libwacom-data noarch 2.9.0-1.fc39 updates 194 k libwayland-client x86_64 1.22.0-2.fc39 fedora 34 k libwayland-cursor x86_64 1.22.0-2.fc39 fedora 19 k libwayland-egl x86_64 1.22.0-2.fc39 fedora 13 k libwayland-server x86_64 1.22.0-2.fc39 fedora 42 k libwebp x86_64 1.3.2-2.fc39 fedora 284 k libwmf-lite x86_64 0.2.13-2.fc39 fedora 73 k libxcb x86_64 1.13.1-12.fc39 fedora 233 k libxcb-devel x86_64 1.13.1-12.fc39 fedora 1.4 M libxcrypt-devel x86_64 4.4.36-2.fc39 fedora 30 k libxkbcommon x86_64 1.6.0-1.fc39 updates 142 k libxkbcommon-x11 x86_64 1.6.0-1.fc39 updates 22 k libxml2-devel x86_64 2.12.4-2.fc39 copr_base 496 k libxshmfence x86_64 1.3-13.fc39 fedora 12 k libxslt x86_64 1.1.39-1.fc39 updates 187 k libzip x86_64 1.10.1-1.fc39 fedora 68 k m4 x86_64 1.4.19-6.fc39 fedora 303 k make x86_64 1:4.4.1-2.fc39 fedora 589 k mesa-libEGL x86_64 23.3.3-1.fc39 updates 134 k mesa-libEGL-devel x86_64 23.3.3-1.fc39 updates 22 k mesa-libGL x86_64 23.3.3-1.fc39 updates 176 k mesa-libGLU x86_64 9.0.3-1.fc39 fedora 160 k mesa-libgbm x86_64 23.3.3-1.fc39 updates 46 k mesa-libglapi x86_64 23.3.3-1.fc39 updates 53 k minizip-ng x86_64 3.0.7-5.fc39 updates 69 k mpdecimal x86_64 2.5.1-7.fc39 fedora 89 k mtdev x86_64 1.1.6-6.fc39 fedora 20 k nativejit x86_64 0.1-7.fc39 fedora 68 k ncurses x86_64 6.4-7.20230520.fc39 fedora 416 k netpbm x86_64 11.02.00-2.fc39 fedora 185 k nettle x86_64 3.9.1-2.fc39 fedora 425 k nspr x86_64 4.35.0-16.fc39 updates 138 k nss x86_64 3.96.1-1.fc39 updates 696 k nss-softokn x86_64 3.96.1-1.fc39 updates 414 k nss-softokn-freebl x86_64 3.96.1-1.fc39 updates 351 k nss-sysinit x86_64 3.96.1-1.fc39 updates 18 k nss-util x86_64 3.96.1-1.fc39 updates 87 k openblas x86_64 0.3.21-6.fc39 fedora 35 k openblas-openmp x86_64 0.3.21-6.fc39 fedora 4.9 M openblas-openmp64 x86_64 0.3.21-6.fc39 fedora 4.8 M openexr-libs x86_64 3.1.10-2.fc39 fedora 1.1 M openjpeg2 x86_64 2.5.0-5.fc39 fedora 178 k opus x86_64 1.3.1-13.fc39 fedora 205 k orc x86_64 0.4.33-3.fc39 fedora 202 k pango x86_64 1.51.0-1.fc39 fedora 343 k pcre2-utf16 x86_64 10.42-1.fc39.2 fedora 212 k perl-AutoLoader noarch 5.74-502.fc39 updates 21 k perl-B x86_64 1.88-502.fc39 updates 177 k perl-Carp noarch 1.54-500.fc39 fedora 29 k perl-Class-Struct noarch 0.68-502.fc39 updates 22 k perl-Data-Dumper x86_64 2.188-501.fc39 fedora 56 k perl-Digest noarch 1.20-500.fc39 fedora 25 k perl-Digest-MD5 x86_64 2.58-500.fc39 fedora 35 k perl-DynaLoader x86_64 1.54-502.fc39 updates 26 k perl-Encode x86_64 4:3.19-500.fc39 fedora 1.7 M perl-English noarch 1.11-502.fc39 updates 14 k perl-Errno x86_64 1.37-502.fc39 updates 15 k perl-Exporter noarch 5.77-500.fc39 fedora 31 k perl-Fcntl x86_64 1.15-502.fc39 updates 21 k perl-File-Basename noarch 2.86-502.fc39 updates 17 k perl-File-Find noarch 1.43-502.fc39 updates 25 k perl-File-Path noarch 2.18-500.fc39 fedora 35 k perl-File-Temp noarch 1:0.231.100-500.fc39 fedora 58 k perl-File-stat noarch 1.13-502.fc39 updates 17 k perl-FileHandle noarch 2.05-502.fc39 updates 16 k perl-Getopt-Long noarch 1:2.54-500.fc39 fedora 60 k perl-Getopt-Std noarch 1.13-502.fc39 updates 16 k perl-HTTP-Tiny noarch 0.088-3.fc39 fedora 56 k perl-IO x86_64 1.52-502.fc39 updates 82 k perl-IO-Socket-IP noarch 0.42-1.fc39 fedora 42 k perl-IO-Socket-SSL noarch 2.083-3.fc39 fedora 225 k perl-IPC-Open3 noarch 1.22-502.fc39 updates 22 k perl-MIME-Base64 x86_64 3.16-500.fc39 fedora 29 k perl-Mozilla-CA noarch 20230801-1.fc39 fedora 13 k perl-Net-SSLeay x86_64 1.92-10.fc39 fedora 360 k perl-POSIX x86_64 2.13-502.fc39 updates 97 k perl-PathTools x86_64 3.89-500.fc39 fedora 87 k perl-Pod-Escapes noarch 1:1.07-500.fc39 fedora 20 k perl-Pod-Perldoc noarch 3.28.01-501.fc39 fedora 86 k perl-Pod-Simple noarch 1:3.45-4.fc39 fedora 218 k perl-Pod-Usage noarch 4:2.03-500.fc39 fedora 39 k perl-Scalar-List-Utils x86_64 5:1.63-500.fc39 fedora 72 k perl-SelectSaver noarch 1.02-502.fc39 updates 12 k perl-Socket x86_64 4:2.037-3.fc39 fedora 55 k perl-Storable x86_64 1:3.32-500.fc39 fedora 99 k perl-Symbol noarch 1.09-502.fc39 updates 14 k perl-Term-ANSIColor noarch 5.01-501.fc39 fedora 47 k perl-Term-Cap noarch 1.18-500.fc39 fedora 22 k perl-Text-ParseWords noarch 3.31-500.fc39 fedora 16 k perl-Text-Tabs+Wrap noarch 2023.0511-3.fc39 fedora 22 k perl-Time-Local noarch 2:1.350-3.fc39 fedora 34 k perl-URI noarch 5.21-1.fc39 fedora 125 k perl-base noarch 2.27-502.fc39 updates 16 k perl-constant noarch 1.33-501.fc39 fedora 22 k perl-if noarch 0.61.000-502.fc39 updates 14 k perl-interpreter x86_64 4:5.38.2-502.fc39 updates 72 k perl-libnet noarch 3.15-501.fc39 fedora 129 k perl-libs x86_64 4:5.38.2-502.fc39 updates 2.4 M perl-locale noarch 1.10-502.fc39 updates 14 k perl-mro x86_64 1.28-502.fc39 updates 29 k perl-overload noarch 1.37-502.fc39 updates 46 k perl-overloading noarch 0.02-502.fc39 updates 13 k perl-parent noarch 1:0.241-500.fc39 fedora 14 k perl-podlators noarch 1:5.01-500.fc39 fedora 125 k perl-vars noarch 1.05-502.fc39 updates 13 k pixman x86_64 0.42.2-2.fc39 fedora 288 k poppler x86_64 23.08.0-1.fc39 fedora 1.2 M poppler-data noarch 0.4.11-5.fc39 fedora 2.0 M poppler-glib x86_64 23.08.0-1.fc39 fedora 185 k pyproject-rpm-macros noarch 1.11.0-1.fc39 updates 42 k python-pip-wheel noarch 23.3.1-4.fc39 copr_base 1.5 M python-rpm-macros noarch 3.12-4.fc39 fedora 19 k python3 x86_64 3.12.1-2.fc39 updates 26 k python3-libs x86_64 3.12.1-2.fc39 updates 9.2 M python3-packaging noarch 23.2-3.fc39 copr_base 116 k python3-rpm-generators noarch 14-7.fc39 fedora 30 k python3-rpm-macros noarch 3.12-4.fc39 fedora 14 k qcustomplot-qt5 x86_64 2.1.1-6.fc39 fedora 450 k qt-settings noarch 39.1-1.fc39 updates 9.6 k qt5-qtbase x86_64 5.15.11-7.fc39 updates 3.6 M qt5-qtbase-common noarch 5.15.11-7.fc39 updates 12 k qt5-qtbase-gui x86_64 5.15.11-7.fc39 updates 6.4 M qt5-qtdatavis3d x86_64 5.15.11-1.fc39 updates 556 k qt5-qtdeclarative x86_64 5.15.11-2.fc39 updates 4.3 M qt5-qtdeclarative-devel x86_64 5.15.11-2.fc39 updates 1.5 M qt5-qtlocation x86_64 5.15.11-1.fc39 updates 3.1 M qt5-qtsensors x86_64 5.15.11-1.fc39 updates 229 k qt5-qtsvg x86_64 5.15.11-1.fc39 updates 186 k qt5-qtsvg-devel x86_64 5.15.11-1.fc39 updates 32 k qt5-qtwebchannel x86_64 5.15.11-1.fc39 updates 100 k qt5-qtwebkit x86_64 5.212.0-0.79alpha4.fc39 updates 13 M qt5-rpm-macros noarch 5.15.11-1.fc39 updates 10 k qwt-qt5 x86_64 6.2.0-3.fc39 fedora 582 k qwtplot3d-qt5 x86_64 1:0.3.0-5.20210828gitb265574.fc39 fedora 101 k raptor x86_64 1.4.21-41.fc39 fedora 246 k rav1e-libs x86_64 0.6.6-4.fc39 updates 1.0 M rhash x86_64 1.4.3-3.fc39 fedora 194 k rsvg-pixbuf-loader x86_64 2.57.1-1.fc39 updates 16 k shared-mime-info x86_64 2.2-4.fc39 fedora 380 k svt-av1-libs x86_64 1.4.1-3.fc39 fedora 2.0 M tzdata noarch 2023d-1.fc39 updates 718 k urw-base35-bookman-fonts noarch 20200910-18.fc39 fedora 847 k urw-base35-c059-fonts noarch 20200910-18.fc39 fedora 874 k urw-base35-d050000l-fonts noarch 20200910-18.fc39 fedora 76 k urw-base35-fonts noarch 20200910-18.fc39 fedora 10 k urw-base35-fonts-common noarch 20200910-18.fc39 fedora 21 k urw-base35-gothic-fonts noarch 20200910-18.fc39 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-18.fc39 fedora 795 k urw-base35-nimbus-roman-fonts noarch 20200910-18.fc39 fedora 856 k urw-base35-nimbus-sans-fonts noarch 20200910-18.fc39 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-18.fc39 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-18.fc39 fedora 42 k urw-base35-z003-fonts noarch 20200910-18.fc39 fedora 276 k vim-filesystem noarch 2:9.1.031-1.fc39 updates 17 k vulkan-headers noarch 1.3.268.0-1.fc39 updates 1.2 M vulkan-loader x86_64 1.3.268.0-1.fc39 updates 148 k vulkan-loader-devel x86_64 1.3.268.0-1.fc39 updates 11 k woff2 x86_64 1.0.2-18.fc39 fedora 61 k xcb-util x86_64 0.4.1-3.fc39 fedora 18 k xcb-util-image x86_64 0.4.1-3.fc39 fedora 19 k xcb-util-keysyms x86_64 0.4.1-3.fc39 fedora 14 k xcb-util-renderutil x86_64 0.3.10-3.fc39 fedora 17 k xcb-util-wm x86_64 0.4.2-3.fc39 fedora 31 k xkeyboard-config noarch 2.40-1.fc39 updates 971 k xml-common noarch 0.6.3-61.fc39 fedora 31 k xorg-x11-proto-devel noarch 2023.2-2.fc39 fedora 298 k xz-devel x86_64 5.4.4-1.fc39 fedora 66 k zipper x86_64 1.0.3-6.fc39 fedora 92 k zlib-devel x86_64 1.2.13-4.fc39 fedora 45 k Transaction Summary ================================================================================================== Install 360 Packages Total size: 261 M Total download size: 247 M Installed size: 1.0 G Downloading Packages: [SKIPPED] python-pip-wheel-23.3.1-4.fc39.noarch.rpm: Already downloaded [SKIPPED] python3-packaging-23.2-3.fc39.noarch.rpm: Already downloaded [SKIPPED] python3-setuptools-68.2.2-2.fc39.noarch.rpm: Already downloaded [SKIPPED] expat-2.5.0-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] libb2-0.98.1-9.fc39.x86_64.rpm: Already downloaded [SKIPPED] mpdecimal-2.5.1-7.fc39.x86_64.rpm: Already downloaded [SKIPPED] python-rpm-macros-3.12-4.fc39.noarch.rpm: Already downloaded [SKIPPED] python3-rpm-generators-14-7.fc39.noarch.rpm: Already downloaded [SKIPPED] python3-rpm-macros-3.12-4.fc39.noarch.rpm: Already downloaded [SKIPPED] pyproject-rpm-macros-1.11.0-1.fc39.noarch.rpm: Already downloaded [SKIPPED] python3-3.12.1-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] python3-devel-3.12.1-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] python3-libs-3.12.1-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] tzdata-2023d-1.fc39.noarch.rpm: Already downloaded (15/360): imath-3.1.9-5.fc39.x86_64.rpm 1.6 MB/s | 97 kB 00:00 (16/360): libCombine-0.2.20-4.fc39.x86_64.rpm 1.9 MB/s | 143 kB 00:00 (17/360): libCombine-devel-0.2.20-4.fc39.x86_64 867 kB/s | 55 kB 00:00 (18/360): graphviz-9.0.0-8.fc39.x86_64.rpm 38 MB/s | 5.0 MB 00:00 (19/360): libnuml-1.1.4-12.fc39.x86_64.rpm 1.6 MB/s | 92 kB 00:00 (20/360): libproxy-0.5.3-4.fc39.x86_64.rpm 4.8 MB/s | 49 kB 00:00 (21/360): libnuml-static-1.1.4-12.fc39.x86_64.r 4.8 MB/s | 113 kB 00:00 (22/360): libnuml-devel-1.1.4-12.fc39.x86_64.rp 1.6 MB/s | 51 kB 00:00 (23/360): libsbml-5.19.0-29.fc39.x86_64.rpm 29 MB/s | 2.3 MB 00:00 (24/360): libsedml-2.0.32-8.fc39.x86_64.rpm 6.4 MB/s | 473 kB 00:00 (25/360): libuuid-devel-2.39.3-2.fc39.x86_64.rp 1.0 MB/s | 25 kB 00:00 (26/360): libsbml-devel-5.19.0-29.fc39.x86_64.r 35 MB/s | 3.6 MB 00:00 (27/360): libsedml-devel-2.0.32-8.fc39.x86_64.r 4.0 MB/s | 156 kB 00:00 (28/360): libxml2-devel-2.12.4-2.fc39.x86_64.rp 28 MB/s | 496 kB 00:00 (29/360): ImageMagick-7.1.1.15-1.fc39.x86_64.rp 1.1 MB/s | 82 kB 00:00 (30/360): abattis-cantarell-vf-fonts-0.301-10.f 1.6 MB/s | 121 kB 00:00 (31/360): adobe-mappings-cmap-deprecated-202306 4.6 MB/s | 113 kB 00:00 (32/360): ImageMagick-libs-7.1.1.15-1.fc39.x86_ 17 MB/s | 2.5 MB 00:00 (33/360): adobe-mappings-cmap-20230622-1.fc39.n 21 MB/s | 2.1 MB 00:00 (34/360): avahi-libs-0.8-24.fc39.x86_64.rpm 4.1 MB/s | 67 kB 00:00 (35/360): adobe-mappings-pdf-20190401-5.fc39.no 7.7 MB/s | 698 kB 00:00 (36/360): bison-3.8.2-5.fc39.x86_64.rpm 34 MB/s | 1.0 MB 00:00 (37/360): alsa-lib-1.2.10-3.fc39.x86_64.rpm 5.9 MB/s | 522 kB 00:00 (38/360): bzip2-devel-1.0.8-16.fc39.x86_64.rpm 5.0 MB/s | 214 kB 00:00 (39/360): cairo-1.18.0-1.fc39.x86_64.rpm 22 MB/s | 710 kB 00:00 (40/360): cairo-gobject-1.18.0-1.fc39.x86_64.rp 1.2 MB/s | 19 kB 00:00 (41/360): cdparanoia-libs-10.2-42.fc39.x86_64.r 3.4 MB/s | 54 kB 00:00 (42/360): cmake-filesystem-3.27.7-1.fc39.x86_64 1.0 MB/s | 19 kB 00:00 (43/360): cmake-rpm-macros-3.27.7-1.fc39.noarch 695 kB/s | 18 kB 00:00 (44/360): cmake-data-3.27.7-1.fc39.noarch.rpm 26 MB/s | 2.2 MB 00:00 (45/360): cppunit-1.15.1-17.fc39.x86_64.rpm 2.8 MB/s | 142 kB 00:00 (46/360): cmake-3.27.7-1.fc39.x86_64.rpm 50 MB/s | 8.0 MB 00:00 (47/360): crossguid2-0.2.2-15.20190529gitca1bf4 360 kB/s | 20 kB 00:00 (48/360): crossguid2-devel-0.2.2-15.20190529git 495 kB/s | 13 kB 00:00 (49/360): default-fonts-core-sans-4.0-9.fc39.no 2.1 MB/s | 32 kB 00:00 (50/360): dbus-libs-1.14.10-1.fc39.x86_64.rpm 2.9 MB/s | 156 kB 00:00 (51/360): double-conversion-3.1.5-9.fc39.x86_64 3.1 MB/s | 49 kB 00:00 (52/360): duktape-2.7.0-5.fc39.x86_64.rpm 9.3 MB/s | 170 kB 00:00 (53/360): desktop-file-utils-0.26-9.fc39.x86_64 1.5 MB/s | 72 kB 00:00 (54/360): emacs-filesystem-29.1-2.fc39.noarch.r 488 kB/s | 7.1 kB 00:00 (55/360): expat-devel-2.5.0-3.fc39.x86_64.rpm 3.2 MB/s | 52 kB 00:00 (56/360): cppunit-devel-1.15.1-17.fc39.x86_64.r 399 kB/s | 70 kB 00:00 (57/360): f2c-libs-20210928-6.fc39.x86_64.rpm 2.0 MB/s | 64 kB 00:00 (58/360): flex-2.6.4-13.fc39.x86_64.rpm 16 MB/s | 312 kB 00:00 (59/360): fontconfig-2.14.2-5.fc39.x86_64.rpm 16 MB/s | 297 kB 00:00 (60/360): f2c-20210928-6.fc39.x86_64.rpm 3.9 MB/s | 320 kB 00:00 (61/360): fonts-filesystem-2.0.5-12.fc39.noarch 567 kB/s | 8.2 kB 00:00 (62/360): freeglut-3.4.0-4.fc39.x86_64.rpm 4.9 MB/s | 154 kB 00:00 (63/360): freetype-2.13.1-2.fc39.x86_64.rpm 18 MB/s | 414 kB 00:00 (64/360): fribidi-1.0.13-2.fc39.x86_64.rpm 5.5 MB/s | 91 kB 00:00 (65/360): gc-8.2.2-4.fc39.x86_64.rpm 6.7 MB/s | 110 kB 00:00 (66/360): freeglut-devel-3.4.0-4.fc39.x86_64.rp 10 MB/s | 945 kB 00:00 (67/360): gd-2.3.3-12.fc39.x86_64.rpm 5.7 MB/s | 139 kB 00:00 (68/360): gdk-pixbuf2-2.42.10-5.fc39.x86_64.rpm 21 MB/s | 484 kB 00:00 (69/360): gl2ps-1.4.2-8.fc39.x86_64.rpm 4.0 MB/s | 64 kB 00:00 (70/360): glx-utils-9.0.0-3.fc39.x86_64.rpm 4.7 MB/s | 77 kB 00:00 (71/360): fftw-libs-double-3.3.10-7.fc39.x86_64 4.8 MB/s | 1.2 MB 00:00 (72/360): gl-manpages-1.1-28.20190306.fc39.noar 15 MB/s | 1.2 MB 00:00 (73/360): google-cpu_features-0.7.0-4.fc39.x86_ 988 kB/s | 36 kB 00:00 (74/360): graphene-1.10.6-6.fc39.x86_64.rpm 3.9 MB/s | 61 kB 00:00 (75/360): graphite2-1.3.14-12.fc39.x86_64.rpm 6.0 MB/s | 95 kB 00:00 (76/360): google-cpu_features-devel-0.7.0-4.fc3 236 kB/s | 16 kB 00:00 (77/360): gts-0.7.6-46.20121130.fc39.x86_64.rpm 13 MB/s | 240 kB 00:00 (78/360): harfbuzz-8.2.1-2.fc39.x86_64.rpm 39 MB/s | 975 kB 00:00 (79/360): highway-1.0.7-1.fc39.x86_64.rpm 19 MB/s | 478 kB 00:00 (80/360): google-droid-sans-fonts-20200215-17.f 23 MB/s | 2.7 MB 00:00 (81/360): hyphen-2.8.8-21.fc39.x86_64.rpm 1.9 MB/s | 29 kB 00:00 (82/360): jasper-libs-3.0.6-4.fc39.x86_64.rpm 8.4 MB/s | 162 kB 00:00 (83/360): jbig2dec-libs-0.19-10.fc39.x86_64.rpm 4.3 MB/s | 73 kB 00:00 (84/360): iso-codes-4.15.0-2.fc39.noarch.rpm 36 MB/s | 3.5 MB 00:00 (85/360): json-glib-1.8.0-1.fc39.x86_64.rpm 8.8 MB/s | 166 kB 00:00 (86/360): jsoncpp-1.9.5-5.fc39.x86_64.rpm 6.4 MB/s | 99 kB 00:00 (87/360): lasi-1.1.3-11.fc39.x86_64.rpm 3.4 MB/s | 54 kB 00:00 (88/360): lcms2-2.15-2.fc39.x86_64.rpm 8.2 MB/s | 177 kB 00:00 (89/360): libICE-1.0.10-11.fc39.x86_64.rpm 4.4 MB/s | 70 kB 00:00 (90/360): libSM-1.2.3-13.fc39.x86_64.rpm 2.7 MB/s | 41 kB 00:00 (91/360): libX11-1.8.7-1.fc39.x86_64.rpm 29 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Installing : flex-2.6.4-13.fc39.x86_64 352/360 Installing : zipper-devel-1.0.3-6.fc39.x86_64 353/360 Installing : minizip-ng-devel-3.0.7-5.fc39.x86_64 354/360 Installing : libnuml-devel-1.1.4-12.fc39.x86_64 355/360 Installing : expat-devel-2.5.0-3.fc39.x86_64 356/360 Installing : libcurl-devel-8.2.1-4.fc39.x86_64 357/360 Installing : swig-4.1.1-9.fc39.x86_64 358/360 Installing : bzip2-devel-1.0.8-16.fc39.x86_64 359/360 Installing : libnuml-static-1.1.4-12.fc39.x86_64 360/360 Running scriptlet: urw-base35-bookman-fonts-20200910-18.fc39.noarch 360/360 Running scriptlet: urw-base35-c059-fonts-20200910-18.fc39.noarch 360/360 Running scriptlet: urw-base35-d050000l-fonts-20200910-18.fc39.noarc 360/360 Running scriptlet: urw-base35-gothic-fonts-20200910-18.fc39.noarch 360/360 Running scriptlet: urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39 360/360 Running scriptlet: urw-base35-nimbus-roman-fonts-20200910-18.fc39.n 360/360 Running scriptlet: urw-base35-nimbus-sans-fonts-20200910-18.fc39.no 360/360 Running scriptlet: urw-base35-p052-fonts-20200910-18.fc39.noarch 360/360 Running scriptlet: urw-base35-standard-symbols-ps-fonts-20200910-18 360/360 Running scriptlet: urw-base35-z003-fonts-20200910-18.fc39.noarch 360/360 Running scriptlet: fontconfig-2.14.2-5.fc39.x86_64 360/360 Running scriptlet: crypto-policies-scripts-20231204-1.git1e3a2e4.fc 360/360 Running scriptlet: nss-3.96.1-1.fc39.x86_64 360/360 Running scriptlet: libnuml-static-1.1.4-12.fc39.x86_64 360/360 Installed: ImageMagick-1:7.1.1.15-1.fc39.x86_64 ImageMagick-libs-1:7.1.1.15-1.fc39.x86_64 LibRaw-0.21.2-2.fc39.x86_64 abattis-cantarell-vf-fonts-0.301-10.fc39.noarch adobe-mappings-cmap-20230622-1.fc39.noarch adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch adobe-mappings-pdf-20190401-5.fc39.noarch alsa-lib-1.2.10-3.fc39.x86_64 annobin-docs-12.35-1.fc39.noarch annobin-plugin-gcc-12.35-1.fc39.x86_64 avahi-libs-0.8-24.fc39.x86_64 bison-3.8.2-5.fc39.x86_64 bzip2-devel-1.0.8-16.fc39.x86_64 cairo-1.18.0-1.fc39.x86_64 cairo-gobject-1.18.0-1.fc39.x86_64 cdparanoia-libs-10.2-42.fc39.x86_64 cmake-3.27.7-1.fc39.x86_64 cmake-data-3.27.7-1.fc39.noarch cmake-filesystem-3.27.7-1.fc39.x86_64 cmake-rpm-macros-3.27.7-1.fc39.noarch cpp-13.2.1-6.fc39.x86_64 cppunit-1.15.1-17.fc39.x86_64 cppunit-devel-1.15.1-17.fc39.x86_64 crossguid2-0.2.2-15.20190529gitca1bf4b.fc39.x86_64 crossguid2-devel-0.2.2-15.20190529gitca1bf4b.fc39.x86_64 crypto-policies-scripts-20231204-1.git1e3a2e4.fc39.noarch cups-libs-1:2.4.7-5.fc39.x86_64 dbus-libs-1:1.14.10-1.fc39.x86_64 default-fonts-core-sans-4.0-9.fc39.noarch desktop-file-utils-0.26-9.fc39.x86_64 double-conversion-3.1.5-9.fc39.x86_64 duktape-2.7.0-5.fc39.x86_64 emacs-filesystem-1:29.1-2.fc39.noarch expat-2.5.0-3.fc39.x86_64 expat-devel-2.5.0-3.fc39.x86_64 f2c-20210928-6.fc39.x86_64 f2c-libs-20210928-6.fc39.x86_64 fftw-libs-double-3.3.10-7.fc39.x86_64 flex-2.6.4-13.fc39.x86_64 flexiblas-3.4.1-1.fc39.x86_64 flexiblas-devel-3.4.1-1.fc39.x86_64 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perl-locale-1.10-502.fc39.noarch perl-mro-1.28-502.fc39.x86_64 perl-overload-1.37-502.fc39.noarch perl-overloading-0.02-502.fc39.noarch perl-parent-1:0.241-500.fc39.noarch perl-podlators-1:5.01-500.fc39.noarch perl-vars-1.05-502.fc39.noarch pixman-0.42.2-2.fc39.x86_64 poppler-23.08.0-1.fc39.x86_64 poppler-data-0.4.11-5.fc39.noarch poppler-glib-23.08.0-1.fc39.x86_64 pyproject-rpm-macros-1.11.0-1.fc39.noarch python-pip-wheel-23.3.1-4.fc39.noarch python-rpm-macros-3.12-4.fc39.noarch python3-3.12.1-2.fc39.x86_64 python3-devel-3.12.1-2.fc39.x86_64 python3-libs-3.12.1-2.fc39.x86_64 python3-packaging-23.2-3.fc39.noarch python3-rpm-generators-14-7.fc39.noarch python3-rpm-macros-3.12-4.fc39.noarch python3-setuptools-68.2.2-2.fc39.noarch qcustomplot-qt5-2.1.1-6.fc39.x86_64 qcustomplot-qt5-devel-2.1.1-6.fc39.x86_64 qt-settings-39.1-1.fc39.noarch qt5-qtbase-5.15.11-7.fc39.x86_64 qt5-qtbase-common-5.15.11-7.fc39.noarch qt5-qtbase-devel-5.15.11-7.fc39.x86_64 qt5-qtbase-gui-5.15.11-7.fc39.x86_64 qt5-qtdatavis3d-5.15.11-1.fc39.x86_64 qt5-qtdatavis3d-devel-5.15.11-1.fc39.x86_64 qt5-qtdeclarative-5.15.11-2.fc39.x86_64 qt5-qtdeclarative-devel-5.15.11-2.fc39.x86_64 qt5-qtlocation-5.15.11-1.fc39.x86_64 qt5-qtsensors-5.15.11-1.fc39.x86_64 qt5-qtsvg-5.15.11-1.fc39.x86_64 qt5-qtsvg-devel-5.15.11-1.fc39.x86_64 qt5-qtwebchannel-5.15.11-1.fc39.x86_64 qt5-qtwebkit-5.212.0-0.79alpha4.fc39.x86_64 qt5-qtwebkit-devel-5.212.0-0.79alpha4.fc39.x86_64 qt5-rpm-macros-5.15.11-1.fc39.noarch qwt-qt5-6.2.0-3.fc39.x86_64 qwt-qt5-devel-6.2.0-3.fc39.x86_64 qwtplot3d-qt5-1:0.3.0-5.20210828gitb265574.fc39.x86_64 qwtplot3d-qt5-devel-1:0.3.0-5.20210828gitb265574.fc39.x86_64 raptor-1.4.21-41.fc39.x86_64 raptor-devel-1.4.21-41.fc39.x86_64 rav1e-libs-0.6.6-4.fc39.x86_64 rhash-1.4.3-3.fc39.x86_64 rsvg-pixbuf-loader-2.57.1-1.fc39.x86_64 shared-mime-info-2.2-4.fc39.x86_64 svt-av1-libs-1.4.1-3.fc39.x86_64 swig-4.1.1-9.fc39.x86_64 tzdata-2023d-1.fc39.noarch urw-base35-bookman-fonts-20200910-18.fc39.noarch urw-base35-c059-fonts-20200910-18.fc39.noarch urw-base35-d050000l-fonts-20200910-18.fc39.noarch urw-base35-fonts-20200910-18.fc39.noarch urw-base35-fonts-common-20200910-18.fc39.noarch urw-base35-gothic-fonts-20200910-18.fc39.noarch urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch urw-base35-p052-fonts-20200910-18.fc39.noarch urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch urw-base35-z003-fonts-20200910-18.fc39.noarch vim-filesystem-2:9.1.031-1.fc39.noarch vulkan-headers-1.3.268.0-1.fc39.noarch vulkan-loader-1.3.268.0-1.fc39.x86_64 vulkan-loader-devel-1.3.268.0-1.fc39.x86_64 woff2-1.0.2-18.fc39.x86_64 xcb-util-0.4.1-3.fc39.x86_64 xcb-util-image-0.4.1-3.fc39.x86_64 xcb-util-keysyms-0.4.1-3.fc39.x86_64 xcb-util-renderutil-0.3.10-3.fc39.x86_64 xcb-util-wm-0.4.2-3.fc39.x86_64 xkeyboard-config-2.40-1.fc39.noarch xml-common-0.6.3-61.fc39.noarch xorg-x11-proto-devel-2023.2-2.fc39.noarch xz-devel-5.4.4-1.fc39.x86_64 zipper-1.0.3-6.fc39.x86_64 zipper-devel-1.0.3-6.fc39.x86_64 zlib-devel-1.2.13-4.fc39.x86_64 Complete! Finish: build setup for COPASI-4.42.284-5.fc39.src.rpm Start: rpmbuild COPASI-4.42.284-5.fc39.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1705881600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.gpnSYC + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf COPASI-Build-284 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/COPASI-Build-284.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd COPASI-Build-284 + rm -rf /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -f license.txt ++ find copasi -type f '(' -name '*.cpp' ')' + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + touch -r copasi/xml/parser/UnsupportedAnnotationHandler.cpp copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new + mv copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + touch -r copasi/xml/parser/UnitDefinitionHandler.cpp copasi/xml/parser/UnitDefinitionHandler.cpp.new + mv copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + touch -r copasi/xml/parser/UNKNOWNHandler.cpp copasi/xml/parser/UNKNOWNHandler.cpp.new + mv copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + touch -r copasi/xml/parser/TextGlyphHandler.cpp copasi/xml/parser/TextGlyphHandler.cpp.new + mv copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + touch -r copasi/xml/parser/TaskHandler.cpp copasi/xml/parser/TaskHandler.cpp.new + mv copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + touch -r copasi/xml/parser/TableHandler.cpp copasi/xml/parser/TableHandler.cpp.new + mv copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + touch -r copasi/xml/parser/SubstrateHandler.cpp copasi/xml/parser/SubstrateHandler.cpp.new + mv copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + touch -r copasi/xml/parser/StyleHandler.cpp copasi/xml/parser/StyleHandler.cpp.new + mv copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + touch -r copasi/xml/parser/StateTemplateVariableHandler.cpp copasi/xml/parser/StateTemplateVariableHandler.cpp.new + mv copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + touch -r copasi/xml/parser/StateTemplateHandler.cpp copasi/xml/parser/StateTemplateHandler.cpp.new + mv copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + touch -r copasi/xml/parser/SourceParameterHandler.cpp copasi/xml/parser/SourceParameterHandler.cpp.new + mv copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + touch -r copasi/xml/parser/SliderHandler.cpp copasi/xml/parser/SliderHandler.cpp.new + mv copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + touch -r copasi/xml/parser/SBMLMapHandler.cpp copasi/xml/parser/SBMLMapHandler.cpp.new + mv copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + touch -r copasi/xml/parser/ReportTargetHandler.cpp copasi/xml/parser/ReportTargetHandler.cpp.new + mv copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + touch -r copasi/xml/parser/ReportSectionHandler.cpp copasi/xml/parser/ReportSectionHandler.cpp.new + mv copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + touch -r copasi/xml/parser/ReportDefinitionHandler.cpp copasi/xml/parser/ReportDefinitionHandler.cpp.new + mv copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + touch -r copasi/xml/parser/RenderTextHandler.cpp copasi/xml/parser/RenderTextHandler.cpp.new + mv copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + touch -r copasi/xml/parser/RenderInformationHandler.cpp copasi/xml/parser/RenderInformationHandler.cpp.new + mv copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + touch -r copasi/xml/parser/RenderCurveHandler.cpp copasi/xml/parser/RenderCurveHandler.cpp.new + mv copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + touch -r copasi/xml/parser/RenderCurveElementHandler.cpp copasi/xml/parser/RenderCurveElementHandler.cpp.new + mv copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + touch -r copasi/xml/parser/RectangleHandler.cpp copasi/xml/parser/RectangleHandler.cpp.new + mv copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + touch -r copasi/xml/parser/ReactionHandler.cpp copasi/xml/parser/ReactionHandler.cpp.new + mv copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + touch -r copasi/xml/parser/ReactionGlyphHandler.cpp copasi/xml/parser/ReactionGlyphHandler.cpp.new + mv copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + touch -r copasi/xml/parser/RadialGradientHandler.cpp copasi/xml/parser/RadialGradientHandler.cpp.new + mv copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + touch -r copasi/xml/parser/ProductHandler.cpp copasi/xml/parser/ProductHandler.cpp.new + mv copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + touch -r copasi/xml/parser/PolygonHandler.cpp copasi/xml/parser/PolygonHandler.cpp.new + mv copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + touch -r copasi/xml/parser/PointHandler.cpp copasi/xml/parser/PointHandler.cpp.new + mv copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + touch -r copasi/xml/parser/PlotSpecificationHandler.cpp copasi/xml/parser/PlotSpecificationHandler.cpp.new + mv copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + touch -r copasi/xml/parser/PlotItemHandler.cpp copasi/xml/parser/PlotItemHandler.cpp.new + mv copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + touch -r copasi/xml/parser/ParameterTextHandler.cpp copasi/xml/parser/ParameterTextHandler.cpp.new + mv copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + touch -r copasi/xml/parser/ParameterHandler.cpp copasi/xml/parser/ParameterHandler.cpp.new + mv copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + touch -r copasi/xml/parser/ParameterGroupHandler.cpp copasi/xml/parser/ParameterGroupHandler.cpp.new + mv copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + touch -r copasi/xml/parser/ParameterDescriptionHandler.cpp copasi/xml/parser/ParameterDescriptionHandler.cpp.new + mv copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + touch -r copasi/xml/parser/ObjectHandler.cpp copasi/xml/parser/ObjectHandler.cpp.new + mv copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + touch -r copasi/xml/parser/ModifierHandler.cpp copasi/xml/parser/ModifierHandler.cpp.new + mv copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + touch -r copasi/xml/parser/ModelValueHandler.cpp copasi/xml/parser/ModelValueHandler.cpp.new + mv copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + touch -r copasi/xml/parser/ModelParameterSetHandler.cpp copasi/xml/parser/ModelParameterSetHandler.cpp.new + mv copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + touch -r copasi/xml/parser/ModelParameterHandler.cpp copasi/xml/parser/ModelParameterHandler.cpp.new + mv copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + touch -r copasi/xml/parser/ModelParameterGroupHandler.cpp copasi/xml/parser/ModelParameterGroupHandler.cpp.new + mv copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + touch -r copasi/xml/parser/ModelHandler.cpp copasi/xml/parser/ModelHandler.cpp.new + mv copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + touch -r copasi/xml/parser/MiriamAnnotationHandler.cpp copasi/xml/parser/MiriamAnnotationHandler.cpp.new + mv copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + touch -r copasi/xml/parser/MethodHandler.cpp copasi/xml/parser/MethodHandler.cpp.new + mv copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + touch -r copasi/xml/parser/MetaboliteHandler.cpp copasi/xml/parser/MetaboliteHandler.cpp.new + mv copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteGlyphHandler.cpp copasi/xml/parser/MetaboliteGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + touch -r copasi/xml/parser/MathMLHandler.cpp copasi/xml/parser/MathMLHandler.cpp.new + mv copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + touch -r copasi/xml/parser/ListOfLayoutsHandler.cpp copasi/xml/parser/ListOfLayoutsHandler.cpp.new + mv copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + touch -r copasi/xml/parser/ListOfHandler.cpp copasi/xml/parser/ListOfHandler.cpp.new + mv copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + touch -r copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new + mv copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + touch -r copasi/xml/parser/ListOfCurveSegmentsHandler.cpp copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new + mv copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + touch -r copasi/xml/parser/LinearGradientHandler.cpp copasi/xml/parser/LinearGradientHandler.cpp.new + mv copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + touch -r copasi/xml/parser/LineSegmentHandler.cpp copasi/xml/parser/LineSegmentHandler.cpp.new + mv copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + touch -r copasi/xml/parser/LineEndingHandler.cpp copasi/xml/parser/LineEndingHandler.cpp.new + mv copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + touch -r copasi/xml/parser/LayoutHandler.cpp copasi/xml/parser/LayoutHandler.cpp.new + mv copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + touch -r copasi/xml/parser/KineticLawHandler.cpp copasi/xml/parser/KineticLawHandler.cpp.new + mv copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + touch -r copasi/xml/parser/InitialStateHandler.cpp copasi/xml/parser/InitialStateHandler.cpp.new + mv copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + touch -r copasi/xml/parser/ImageHandler.cpp copasi/xml/parser/ImageHandler.cpp.new + mv copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + touch -r copasi/xml/parser/GroupHandler.cpp copasi/xml/parser/GroupHandler.cpp.new + mv copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + touch -r copasi/xml/parser/GradientStopHandler.cpp copasi/xml/parser/GradientStopHandler.cpp.new + mv copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + touch -r copasi/xml/parser/GUIHandler.cpp copasi/xml/parser/GUIHandler.cpp.new + mv copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + touch -r copasi/xml/parser/FunctionHandler.cpp copasi/xml/parser/FunctionHandler.cpp.new + mv copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + touch -r copasi/xml/parser/EventHandler.cpp copasi/xml/parser/EventHandler.cpp.new + mv copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + touch -r copasi/xml/parser/EllipseHandler.cpp copasi/xml/parser/EllipseHandler.cpp.new + mv copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + touch -r copasi/xml/parser/DimensionsHandler.cpp copasi/xml/parser/DimensionsHandler.cpp.new + mv copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + touch -r copasi/xml/parser/CurveHandler.cpp copasi/xml/parser/CurveHandler.cpp.new + mv copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + touch -r copasi/xml/parser/CubicBezierHandler.cpp copasi/xml/parser/CubicBezierHandler.cpp.new + mv copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + touch -r copasi/xml/parser/ConstantHandler.cpp copasi/xml/parser/ConstantHandler.cpp.new + mv copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + touch -r copasi/xml/parser/CompartmentHandler.cpp copasi/xml/parser/CompartmentHandler.cpp.new + mv copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + touch -r copasi/xml/parser/CompartmentGlyphHandler.cpp copasi/xml/parser/CompartmentGlyphHandler.cpp.new + mv copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + touch -r copasi/xml/parser/CommentHandler.cpp copasi/xml/parser/CommentHandler.cpp.new + mv copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + touch -r copasi/xml/parser/ColorDefinitionHandler.cpp copasi/xml/parser/ColorDefinitionHandler.cpp.new + mv copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + touch -r copasi/xml/parser/CharacterDataHandler.cpp copasi/xml/parser/CharacterDataHandler.cpp.new + mv copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + touch -r copasi/xml/parser/ChannelSpecHandler.cpp copasi/xml/parser/ChannelSpecHandler.cpp.new + mv copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + touch -r copasi/xml/parser/CallParameterHandler.cpp copasi/xml/parser/CallParameterHandler.cpp.new + mv copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + touch -r copasi/xml/parser/CXMLParserData.cpp copasi/xml/parser/CXMLParserData.cpp.new + mv copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + touch -r copasi/xml/parser/CXMLParser.cpp copasi/xml/parser/CXMLParser.cpp.new + mv copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + touch -r copasi/xml/parser/CXMLHandlerFactory.cpp copasi/xml/parser/CXMLHandlerFactory.cpp.new + mv copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + touch -r copasi/xml/parser/CXMLHandler.cpp copasi/xml/parser/CXMLHandler.cpp.new + mv copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + touch -r copasi/xml/parser/COPASIHandler.cpp copasi/xml/parser/COPASIHandler.cpp.new + mv copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + touch -r copasi/xml/parser/BoundingBoxHandler.cpp copasi/xml/parser/BoundingBoxHandler.cpp.new + mv copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + touch -r copasi/xml/parser/AssignmentHandler.cpp copasi/xml/parser/AssignmentHandler.cpp.new + mv copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + touch -r copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new + mv copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + touch -r copasi/xml/CFixLocalReactionParameters.cpp copasi/xml/CFixLocalReactionParameters.cpp.new + mv copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + touch -r copasi/xml/CExpat.cpp copasi/xml/CExpat.cpp.new + mv copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + touch -r copasi/xml/CCopasiXMLInterface.cpp copasi/xml/CCopasiXMLInterface.cpp.new + mv copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + touch -r copasi/xml/CCopasiXML.cpp copasi/xml/CCopasiXML.cpp.new + mv copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + touch -r copasi/wizard/wizard.cpp copasi/wizard/wizard.cpp.new + mv copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + touch -r copasi/versioningUI/CQModelVersionHierarchyDM.cpp copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new + mv copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + touch -r copasi/versioningUI/CCreateModelVersionDialog.cpp copasi/versioningUI/CCreateModelVersionDialog.cpp.new + mv copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + touch -r copasi/versioningUI/CBrowseModelVersionDialog.cpp copasi/versioningUI/CBrowseModelVersionDialog.cpp.new + mv copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + touch -r copasi/versioning/CVCard.cpp copasi/versioning/CVCard.cpp.new + mv copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + touch -r copasi/versioning/CModelVersionHierarchy.cpp copasi/versioning/CModelVersionHierarchy.cpp.new + mv copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + touch -r copasi/versioning/CModelVersion.cpp copasi/versioning/CModelVersion.cpp.new + mv copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + touch -r copasi/utilities/utility.cpp copasi/utilities/utility.cpp.new + mv copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + touch -r copasi/utilities/dgemm.cpp copasi/utilities/dgemm.cpp.new + mv copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + touch -r copasi/utilities/CopasiTime.cpp copasi/utilities/CopasiTime.cpp.new + mv copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + touch -r copasi/utilities/Cmd5.cpp copasi/utilities/Cmd5.cpp.new + mv copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + touch -r copasi/utilities/CluX.cpp copasi/utilities/CluX.cpp.new + mv copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + touch -r copasi/utilities/CVersion.cpp copasi/utilities/CVersion.cpp.new + mv copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + touch -r copasi/utilities/CValidity.cpp copasi/utilities/CValidity.cpp.new + mv copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + touch -r copasi/utilities/CValidatedUnit.cpp copasi/utilities/CValidatedUnit.cpp.new + mv copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + touch -r copasi/utilities/CUnitValidator.cpp copasi/utilities/CUnitValidator.cpp.new + mv copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + touch -r copasi/utilities/CUnitParser_yacc.cpp copasi/utilities/CUnitParser_yacc.cpp.new + mv copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + touch -r copasi/utilities/CUnitParser_lex.cpp copasi/utilities/CUnitParser_lex.cpp.new + mv copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + touch -r copasi/utilities/CUnitParser.cpp copasi/utilities/CUnitParser.cpp.new + mv copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + touch -r copasi/utilities/CUnitDefinitionDB.cpp copasi/utilities/CUnitDefinitionDB.cpp.new + mv copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + touch -r copasi/utilities/CUnitDefinition.cpp copasi/utilities/CUnitDefinition.cpp.new + mv copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + touch -r copasi/utilities/CUnitComponent.cpp copasi/utilities/CUnitComponent.cpp.new + mv copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + touch -r copasi/utilities/CUnit.cpp copasi/utilities/CUnit.cpp.new + mv copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + touch -r copasi/utilities/CTaskFactory.cpp copasi/utilities/CTaskFactory.cpp.new + mv copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + touch -r copasi/utilities/CTaskEnum.cpp copasi/utilities/CTaskEnum.cpp.new + mv copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + touch -r copasi/utilities/CTableCell.cpp copasi/utilities/CTableCell.cpp.new + mv copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + touch -r copasi/utilities/CSparseMatrix.cpp copasi/utilities/CSparseMatrix.cpp.new + mv copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + touch -r copasi/utilities/CSlider.cpp copasi/utilities/CSlider.cpp.new + mv copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + touch -r copasi/utilities/CReadConfig.cpp copasi/utilities/CReadConfig.cpp.new + mv copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + touch -r copasi/utilities/CProcessReport.cpp copasi/utilities/CProcessReport.cpp.new + mv copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + touch -r copasi/utilities/CProblemFactory.cpp copasi/utilities/CProblemFactory.cpp.new + mv copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + touch -r copasi/utilities/CParameterEstimationUtils.cpp copasi/utilities/CParameterEstimationUtils.cpp.new + mv copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + touch -r copasi/utilities/CMethodFactory.cpp copasi/utilities/CMethodFactory.cpp.new + mv copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + touch -r copasi/utilities/CLinkMatrix.cpp copasi/utilities/CLinkMatrix.cpp.new + mv copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + touch -r copasi/utilities/CLeastSquareSolution.cpp copasi/utilities/CLeastSquareSolution.cpp.new + mv copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + touch -r copasi/utilities/CIndexedPriorityQueue.cpp copasi/utilities/CIndexedPriorityQueue.cpp.new + mv copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + touch -r copasi/utilities/CExpressionGenerator.cpp copasi/utilities/CExpressionGenerator.cpp.new + mv copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + touch -r copasi/utilities/CDirEntry.cpp copasi/utilities/CDirEntry.cpp.new + mv copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + touch -r copasi/utilities/CDependencyGraph.cpp copasi/utilities/CDependencyGraph.cpp.new + mv copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + touch -r copasi/utilities/CCopasiTaskStatus.cpp copasi/utilities/CCopasiTaskStatus.cpp.new + mv copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + touch -r copasi/utilities/CCopasiTask.cpp copasi/utilities/CCopasiTask.cpp.new + mv copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + touch -r copasi/utilities/CCopasiProblem.cpp copasi/utilities/CCopasiProblem.cpp.new + mv copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + touch -r copasi/utilities/CCopasiParameterGroup.cpp copasi/utilities/CCopasiParameterGroup.cpp.new + mv copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + touch -r copasi/utilities/CCopasiParameter.cpp copasi/utilities/CCopasiParameter.cpp.new + mv copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + touch -r copasi/utilities/CCopasiMethod.cpp copasi/utilities/CCopasiMethod.cpp.new + mv copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + touch -r copasi/utilities/CCopasiMessage.cpp copasi/utilities/CCopasiMessage.cpp.new + mv copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + touch -r copasi/utilities/CCopasiException.cpp copasi/utilities/CCopasiException.cpp.new + mv copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + touch -r copasi/utilities/CBrent.cpp copasi/utilities/CBrent.cpp.new + mv copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + touch -r copasi/utilities/CBaseUnit.cpp copasi/utilities/CBaseUnit.cpp.new + mv copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + touch -r copasi/undoUI/CQUndoDialog.cpp copasi/undoUI/CQUndoDialog.cpp.new + mv copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + touch -r copasi/undoUI/CQUndoDM.cpp copasi/undoUI/CQUndoDM.cpp.new + mv copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + touch -r copasi/undo/CUndoStack.cpp copasi/undo/CUndoStack.cpp.new + mv copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + touch -r copasi/undo/CUndoObjectInterface.cpp copasi/undo/CUndoObjectInterface.cpp.new + mv copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + touch -r copasi/undo/CUndoData.cpp copasi/undo/CUndoData.cpp.new + mv copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + touch -r copasi/undo/CDataValue.cpp copasi/undo/CDataValue.cpp.new + mv copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CData.cpp.new copasi/undo/CData.cpp + touch -r copasi/undo/CData.cpp copasi/undo/CData.cpp.new + mv copasi/undo/CData.cpp.new copasi/undo/CData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + touch -r copasi/tssanalysis/CTSSATask.cpp copasi/tssanalysis/CTSSATask.cpp.new + mv copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + touch -r copasi/tssanalysis/CTSSAProblem.cpp copasi/tssanalysis/CTSSAProblem.cpp.new + mv copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + touch -r copasi/tssanalysis/CTSSAMethod.cpp copasi/tssanalysis/CTSSAMethod.cpp.new + mv copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + touch -r copasi/tssanalysis/CILDMModifiedMethod.cpp copasi/tssanalysis/CILDMModifiedMethod.cpp.new + mv copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + touch -r copasi/tssanalysis/CILDMMethod.cpp copasi/tssanalysis/CILDMMethod.cpp.new + mv copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + touch -r copasi/tssanalysis/CCSPMethod.cpp copasi/tssanalysis/CCSPMethod.cpp.new + mv copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + touch -r copasi/tss/CODEExporterXPPAUT.cpp copasi/tss/CODEExporterXPPAUT.cpp.new + mv copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + touch -r copasi/tss/CODEExporterC.cpp copasi/tss/CODEExporterC.cpp.new + mv copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + touch -r copasi/tss/CODEExporterBM.cpp copasi/tss/CODEExporterBM.cpp.new + mv copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + touch -r copasi/tss/CODEExporter.cpp copasi/tss/CODEExporter.cpp.new + mv copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + touch -r copasi/trajectory/CTrajectoryTask.cpp copasi/trajectory/CTrajectoryTask.cpp.new + mv copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + touch -r copasi/trajectory/CTrajectoryProblem.cpp copasi/trajectory/CTrajectoryProblem.cpp.new + mv copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + touch -r copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new + mv copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + touch -r copasi/trajectory/CTrajectoryMethod.cpp copasi/trajectory/CTrajectoryMethod.cpp.new + mv copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + touch -r copasi/trajectory/CTrajAdaptiveSA.cpp copasi/trajectory/CTrajAdaptiveSA.cpp.new + mv copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + touch -r copasi/trajectory/CTimeSeries.cpp copasi/trajectory/CTimeSeries.cpp.new + mv copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + touch -r copasi/trajectory/CTauLeapMethod.cpp copasi/trajectory/CTauLeapMethod.cpp.new + mv copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + touch -r copasi/trajectory/CStochasticRungeKuttaRI5.cpp copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new + mv copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + touch -r copasi/trajectory/CStochNextReactionMethod.cpp copasi/trajectory/CStochNextReactionMethod.cpp.new + mv copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + touch -r copasi/trajectory/CStochMethod.cpp copasi/trajectory/CStochMethod.cpp.new + mv copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + touch -r copasi/trajectory/CStochDirectMethod.cpp copasi/trajectory/CStochDirectMethod.cpp.new + mv copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + touch -r copasi/trajectory/CRungeKutta.cpp copasi/trajectory/CRungeKutta.cpp.new + mv copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + touch -r copasi/trajectory/CRootFinder.cpp copasi/trajectory/CRootFinder.cpp.new + mv copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + touch -r copasi/trajectory/CRadau5Method.cpp copasi/trajectory/CRadau5Method.cpp.new + mv copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + touch -r copasi/trajectory/CLsodaMethod2.cpp copasi/trajectory/CLsodaMethod2.cpp.new + mv copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + touch -r copasi/trajectory/CLsodaMethod.cpp copasi/trajectory/CLsodaMethod.cpp.new + mv copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionRKMethod.cpp copasi/trajectory/CHybridNextReactionRKMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionLSODAMethod.cpp copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + touch -r copasi/trajectory/CHybridMethodODE45.cpp copasi/trajectory/CHybridMethodODE45.cpp.new + mv copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + touch -r copasi/trajectory/CHybridMethod.cpp copasi/trajectory/CHybridMethod.cpp.new + mv copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + touch -r copasi/timesens/CTimeSensTask.cpp copasi/timesens/CTimeSensTask.cpp.new + mv copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + touch -r copasi/timesens/CTimeSensProblem.cpp copasi/timesens/CTimeSensProblem.cpp.new + mv copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + touch -r copasi/timesens/CTimeSensMethod.cpp copasi/timesens/CTimeSensMethod.cpp.new + mv copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + touch -r copasi/timesens/CTimeSensLsodaMethod.cpp copasi/timesens/CTimeSensLsodaMethod.cpp.new + mv copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + touch -r copasi/tex/CStructureParser.cpp copasi/tex/CStructureParser.cpp.new + mv copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + touch -r copasi/tex/CMathMLToTeX.cpp copasi/tex/CMathMLToTeX.cpp.new + mv copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/test.cpp.new copasi/test2/test.cpp + touch -r copasi/test2/test.cpp copasi/test2/test.cpp.new + mv copasi/test2/test.cpp.new copasi/test2/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + touch -r copasi/test2/CNormalTranslation.cpp copasi/test2/CNormalTranslation.cpp.new + mv copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + touch -r copasi/test2/CNormalSum.cpp copasi/test2/CNormalSum.cpp.new + mv copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + touch -r copasi/test2/CNormalProduct.cpp copasi/test2/CNormalProduct.cpp.new + mv copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + touch -r copasi/test2/CNormalLcm.cpp copasi/test2/CNormalLcm.cpp.new + mv copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + touch -r copasi/test2/CNormalItemPower.cpp copasi/test2/CNormalItemPower.cpp.new + mv copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + touch -r copasi/test2/CNormalItem.cpp copasi/test2/CNormalItem.cpp.new + mv copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + touch -r copasi/test2/CNormalFraction.cpp copasi/test2/CNormalFraction.cpp.new + mv copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test/test.cpp.new copasi/test/test.cpp + touch -r copasi/test/test.cpp copasi/test/test.cpp.new + mv copasi/test/test.cpp.new copasi/test/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + touch -r copasi/steadystate/CSteadyStateTask.cpp copasi/steadystate/CSteadyStateTask.cpp.new + mv copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + touch -r copasi/steadystate/CSteadyStateProblem.cpp copasi/steadystate/CSteadyStateProblem.cpp.new + mv copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + touch -r copasi/steadystate/CSteadyStateMethod.cpp copasi/steadystate/CSteadyStateMethod.cpp.new + mv copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + touch -r copasi/steadystate/CNewtonMethod.cpp copasi/steadystate/CNewtonMethod.cpp.new + mv copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + touch -r copasi/steadystate/CMCATask.cpp copasi/steadystate/CMCATask.cpp.new + mv copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + touch -r copasi/steadystate/CMCAProblem.cpp copasi/steadystate/CMCAProblem.cpp.new + mv copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + touch -r copasi/steadystate/CMCAMethod.cpp copasi/steadystate/CMCAMethod.cpp.new + mv copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + touch -r copasi/steadystate/CEigen.cpp copasi/steadystate/CEigen.cpp.new + mv copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + touch -r copasi/sensitivities/CSensTask.cpp copasi/sensitivities/CSensTask.cpp.new + mv copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + touch -r copasi/sensitivities/CSensProblem.cpp copasi/sensitivities/CSensProblem.cpp.new + mv copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + touch -r copasi/sensitivities/CSensMethod.cpp copasi/sensitivities/CSensMethod.cpp.new + mv copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + touch -r copasi/sedml/SEDMLUtils.cpp copasi/sedml/SEDMLUtils.cpp.new + mv copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + touch -r copasi/sedml/SEDMLImporter.cpp copasi/sedml/SEDMLImporter.cpp.new + mv copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + touch -r copasi/sedml/CSEDMLExporter.cpp copasi/sedml/CSEDMLExporter.cpp.new + mv copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + touch -r copasi/scan/CScanTask.cpp copasi/scan/CScanTask.cpp.new + mv copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + touch -r copasi/scan/CScanProblem.cpp copasi/scan/CScanProblem.cpp.new + mv copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + touch -r copasi/scan/CScanMethod.cpp copasi/scan/CScanMethod.cpp.new + mv copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + touch -r copasi/sbmlunit/Expression2PresentationMMLUnits.cpp copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new + mv copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + touch -r copasi/sbmlunit/Expression2PresentationMML.cpp copasi/sbmlunit/Expression2PresentationMML.cpp.new + mv copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + touch -r copasi/sbmlunit/CSBMLunitInterface.cpp copasi/sbmlunit/CSBMLunitInterface.cpp.new + mv copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + touch -r copasi/sbmlunit/CSBMLunit.cpp copasi/sbmlunit/CSBMLunit.cpp.new + mv copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + touch -r copasi/sbml/unittests/utilities.cpp copasi/sbml/unittests/utilities.cpp.new + mv copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + touch -r copasi/sbml/unittests/test000104.cpp copasi/sbml/unittests/test000104.cpp.new + mv copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + touch -r copasi/sbml/unittests/test000103.cpp copasi/sbml/unittests/test000103.cpp.new + mv copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + touch -r copasi/sbml/unittests/test000102.cpp copasi/sbml/unittests/test000102.cpp.new + mv copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + touch -r copasi/sbml/unittests/test000101.cpp copasi/sbml/unittests/test000101.cpp.new + mv copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + touch -r copasi/sbml/unittests/test000100.cpp copasi/sbml/unittests/test000100.cpp.new + mv copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + touch -r copasi/sbml/unittests/test000099.cpp copasi/sbml/unittests/test000099.cpp.new + mv copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + touch -r copasi/sbml/unittests/test000098.cpp copasi/sbml/unittests/test000098.cpp.new + mv copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + touch -r copasi/sbml/unittests/test000097.cpp copasi/sbml/unittests/test000097.cpp.new + mv copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + touch -r copasi/sbml/unittests/test000096.cpp copasi/sbml/unittests/test000096.cpp.new + mv copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + touch -r copasi/sbml/unittests/test000095.cpp copasi/sbml/unittests/test000095.cpp.new + mv copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + touch -r copasi/sbml/unittests/test000094.cpp copasi/sbml/unittests/test000094.cpp.new + mv copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + touch -r copasi/sbml/unittests/test000093.cpp copasi/sbml/unittests/test000093.cpp.new + mv copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + touch -r copasi/sbml/unittests/test000092.cpp copasi/sbml/unittests/test000092.cpp.new + mv copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + touch -r copasi/sbml/unittests/test000091.cpp copasi/sbml/unittests/test000091.cpp.new + mv copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + touch -r copasi/sbml/unittests/test000090.cpp copasi/sbml/unittests/test000090.cpp.new + mv copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + touch -r copasi/sbml/unittests/test000089.cpp copasi/sbml/unittests/test000089.cpp.new + mv copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + touch -r copasi/sbml/unittests/test000088.cpp copasi/sbml/unittests/test000088.cpp.new + mv copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + touch -r copasi/sbml/unittests/test000087.cpp copasi/sbml/unittests/test000087.cpp.new + mv copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + touch -r copasi/sbml/unittests/test000086.cpp copasi/sbml/unittests/test000086.cpp.new + mv copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + touch -r copasi/sbml/unittests/test000085.cpp copasi/sbml/unittests/test000085.cpp.new + mv copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + touch -r copasi/sbml/unittests/test000084.cpp copasi/sbml/unittests/test000084.cpp.new + mv copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + touch -r copasi/sbml/unittests/test000083.cpp copasi/sbml/unittests/test000083.cpp.new + mv copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + touch -r copasi/sbml/unittests/test000082.cpp copasi/sbml/unittests/test000082.cpp.new + mv copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + touch -r copasi/sbml/unittests/test000081.cpp copasi/sbml/unittests/test000081.cpp.new + mv copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + touch -r copasi/sbml/unittests/test000080.cpp copasi/sbml/unittests/test000080.cpp.new + mv copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + touch -r copasi/sbml/unittests/test000079.cpp copasi/sbml/unittests/test000079.cpp.new + mv copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + touch -r copasi/sbml/unittests/test000078.cpp copasi/sbml/unittests/test000078.cpp.new + mv copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + touch -r copasi/sbml/unittests/test000077.cpp copasi/sbml/unittests/test000077.cpp.new + mv copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + touch -r copasi/sbml/unittests/test000076.cpp copasi/sbml/unittests/test000076.cpp.new + mv copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + touch -r copasi/sbml/unittests/test000075.cpp copasi/sbml/unittests/test000075.cpp.new + mv copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + touch -r copasi/sbml/unittests/test000074.cpp copasi/sbml/unittests/test000074.cpp.new + mv copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + touch -r copasi/sbml/unittests/test000073.cpp copasi/sbml/unittests/test000073.cpp.new + mv copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + touch -r copasi/sbml/unittests/test000072.cpp copasi/sbml/unittests/test000072.cpp.new + mv copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + touch -r copasi/sbml/unittests/test000071.cpp copasi/sbml/unittests/test000071.cpp.new + mv copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + touch -r copasi/sbml/unittests/test000070.cpp copasi/sbml/unittests/test000070.cpp.new + mv copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + touch -r copasi/sbml/unittests/test000069.cpp copasi/sbml/unittests/test000069.cpp.new + mv copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + touch -r copasi/sbml/unittests/test000068.cpp copasi/sbml/unittests/test000068.cpp.new + mv copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + touch -r copasi/sbml/unittests/test000067.cpp copasi/sbml/unittests/test000067.cpp.new + mv copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + touch -r copasi/sbml/unittests/test000066.cpp copasi/sbml/unittests/test000066.cpp.new + mv copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + touch -r copasi/sbml/unittests/test000065.cpp copasi/sbml/unittests/test000065.cpp.new + mv copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + touch -r copasi/sbml/unittests/test000064.cpp copasi/sbml/unittests/test000064.cpp.new + mv copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + touch -r copasi/sbml/unittests/test000063.cpp copasi/sbml/unittests/test000063.cpp.new + mv copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + touch -r copasi/sbml/unittests/test000062.cpp copasi/sbml/unittests/test000062.cpp.new + mv copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + touch -r copasi/sbml/unittests/test000061.cpp copasi/sbml/unittests/test000061.cpp.new + mv copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + touch -r copasi/sbml/unittests/test000060.cpp copasi/sbml/unittests/test000060.cpp.new + mv copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + touch -r copasi/sbml/unittests/test000059.cpp copasi/sbml/unittests/test000059.cpp.new + mv copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + touch -r copasi/sbml/unittests/test000058.cpp copasi/sbml/unittests/test000058.cpp.new + mv copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + touch -r copasi/sbml/unittests/test000057.cpp copasi/sbml/unittests/test000057.cpp.new + mv copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + touch -r copasi/sbml/unittests/test000056.cpp copasi/sbml/unittests/test000056.cpp.new + mv copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + touch -r copasi/sbml/unittests/test000055.cpp copasi/sbml/unittests/test000055.cpp.new + mv copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + touch -r copasi/sbml/unittests/test000054.cpp copasi/sbml/unittests/test000054.cpp.new + mv copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + touch -r copasi/sbml/unittests/test000053.cpp copasi/sbml/unittests/test000053.cpp.new + mv copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + touch -r copasi/sbml/unittests/test000052.cpp copasi/sbml/unittests/test000052.cpp.new + mv copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + touch -r copasi/sbml/unittests/test000051.cpp copasi/sbml/unittests/test000051.cpp.new + mv copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + touch -r copasi/sbml/unittests/test000050.cpp copasi/sbml/unittests/test000050.cpp.new + mv copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + touch -r copasi/sbml/unittests/test000049.cpp copasi/sbml/unittests/test000049.cpp.new + mv copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + touch -r copasi/sbml/unittests/test000048.cpp copasi/sbml/unittests/test000048.cpp.new + mv copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + touch -r copasi/sbml/unittests/test000047.cpp copasi/sbml/unittests/test000047.cpp.new + mv copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + touch -r copasi/sbml/unittests/test000046.cpp copasi/sbml/unittests/test000046.cpp.new + mv copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + touch -r copasi/sbml/unittests/test000045.cpp copasi/sbml/unittests/test000045.cpp.new + mv copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + touch -r copasi/sbml/unittests/test000044.cpp copasi/sbml/unittests/test000044.cpp.new + mv copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + touch -r copasi/sbml/unittests/test000043.cpp copasi/sbml/unittests/test000043.cpp.new + mv copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + touch -r copasi/sbml/unittests/test000042.cpp copasi/sbml/unittests/test000042.cpp.new + mv copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + touch -r copasi/sbml/unittests/test000041.cpp copasi/sbml/unittests/test000041.cpp.new + mv copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + touch -r copasi/sbml/unittests/test000040.cpp copasi/sbml/unittests/test000040.cpp.new + mv copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + touch -r copasi/sbml/unittests/test000039.cpp copasi/sbml/unittests/test000039.cpp.new + mv copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + touch -r copasi/sbml/unittests/test000038.cpp copasi/sbml/unittests/test000038.cpp.new + mv copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + touch -r copasi/sbml/unittests/test000037.cpp copasi/sbml/unittests/test000037.cpp.new + mv copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + touch -r copasi/sbml/unittests/test000036.cpp copasi/sbml/unittests/test000036.cpp.new + mv copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + touch -r copasi/sbml/unittests/test000035.cpp copasi/sbml/unittests/test000035.cpp.new + mv copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + touch -r copasi/sbml/unittests/test000034.cpp copasi/sbml/unittests/test000034.cpp.new + mv copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + touch -r copasi/sbml/unittests/test000033.cpp copasi/sbml/unittests/test000033.cpp.new + mv copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + touch -r copasi/sbml/unittests/test000032.cpp copasi/sbml/unittests/test000032.cpp.new + mv copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + touch -r copasi/sbml/unittests/test000031.cpp copasi/sbml/unittests/test000031.cpp.new + mv copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + touch -r copasi/sbml/unittests/test000030.cpp copasi/sbml/unittests/test000030.cpp.new + mv copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + touch -r copasi/sbml/unittests/test000029.cpp copasi/sbml/unittests/test000029.cpp.new + mv copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + touch -r copasi/sbml/unittests/test000028.cpp copasi/sbml/unittests/test000028.cpp.new + mv copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + touch -r copasi/sbml/unittests/test000027.cpp copasi/sbml/unittests/test000027.cpp.new + mv copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + touch -r copasi/sbml/unittests/test000026.cpp copasi/sbml/unittests/test000026.cpp.new + mv copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + touch -r copasi/sbml/unittests/test000025.cpp copasi/sbml/unittests/test000025.cpp.new + mv copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + touch -r copasi/sbml/unittests/test000024.cpp copasi/sbml/unittests/test000024.cpp.new + mv copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + touch -r copasi/sbml/unittests/test000023.cpp copasi/sbml/unittests/test000023.cpp.new + mv copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + touch -r copasi/sbml/unittests/test000022.cpp copasi/sbml/unittests/test000022.cpp.new + mv copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + touch -r copasi/sbml/unittests/test000021.cpp copasi/sbml/unittests/test000021.cpp.new + mv copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + touch -r copasi/sbml/unittests/test000020.cpp copasi/sbml/unittests/test000020.cpp.new + mv copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + touch -r copasi/sbml/unittests/test000019.cpp copasi/sbml/unittests/test000019.cpp.new + mv copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + touch -r copasi/sbml/unittests/test000018.cpp copasi/sbml/unittests/test000018.cpp.new + mv copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + touch -r copasi/sbml/unittests/test000017.cpp copasi/sbml/unittests/test000017.cpp.new + mv copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + touch -r copasi/sbml/unittests/test000016.cpp copasi/sbml/unittests/test000016.cpp.new + mv copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + touch -r copasi/sbml/unittests/test000015.cpp copasi/sbml/unittests/test000015.cpp.new + mv copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + touch -r copasi/sbml/unittests/test000014.cpp copasi/sbml/unittests/test000014.cpp.new + mv copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + touch -r copasi/sbml/unittests/test000013.cpp copasi/sbml/unittests/test000013.cpp.new + mv copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + touch -r copasi/sbml/unittests/test000012.cpp copasi/sbml/unittests/test000012.cpp.new + mv copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + touch -r copasi/sbml/unittests/test000011.cpp copasi/sbml/unittests/test000011.cpp.new + mv copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + touch -r copasi/sbml/unittests/test000010.cpp copasi/sbml/unittests/test000010.cpp.new + mv copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + touch -r copasi/sbml/unittests/test000009.cpp copasi/sbml/unittests/test000009.cpp.new + mv copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + touch -r copasi/sbml/unittests/test000008.cpp copasi/sbml/unittests/test000008.cpp.new + mv copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + touch -r copasi/sbml/unittests/test000007.cpp copasi/sbml/unittests/test000007.cpp.new + mv copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + touch -r copasi/sbml/unittests/test000006.cpp copasi/sbml/unittests/test000006.cpp.new + mv copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + touch -r copasi/sbml/unittests/test000005.cpp copasi/sbml/unittests/test000005.cpp.new + mv copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + touch -r copasi/sbml/unittests/test000004.cpp copasi/sbml/unittests/test000004.cpp.new + mv copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + touch -r copasi/sbml/unittests/test000003.cpp copasi/sbml/unittests/test000003.cpp.new + mv copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + touch -r copasi/sbml/unittests/test000002.cpp copasi/sbml/unittests/test000002.cpp.new + mv copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + touch -r copasi/sbml/unittests/test000001.cpp copasi/sbml/unittests/test000001.cpp.new + mv copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + touch -r copasi/sbml/unittests/test.cpp copasi/sbml/unittests/test.cpp.new + mv copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + touch -r copasi/sbml/StdException.cpp copasi/sbml/StdException.cpp.new + mv copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + touch -r copasi/sbml/SBMLUtils.cpp copasi/sbml/SBMLUtils.cpp.new + mv copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + touch -r copasi/sbml/SBMLUnitSupport.cpp copasi/sbml/SBMLUnitSupport.cpp.new + mv copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + touch -r copasi/sbml/SBMLReference.cpp copasi/sbml/SBMLReference.cpp.new + mv copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + touch -r copasi/sbml/SBMLIncompatibility.cpp copasi/sbml/SBMLIncompatibility.cpp.new + mv copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + touch -r copasi/sbml/SBMLImporter.cpp copasi/sbml/SBMLImporter.cpp.new + mv copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + touch -r copasi/sbml/ConverterASTNode.cpp copasi/sbml/ConverterASTNode.cpp.new + mv copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + touch -r copasi/sbml/CSBMLExporter.cpp copasi/sbml/CSBMLExporter.cpp.new + mv copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + touch -r copasi/sbml/CCellDesignerImporter.cpp copasi/sbml/CCellDesignerImporter.cpp.new + mv copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + touch -r copasi/resourcesUI/CQIconResource.cpp copasi/resourcesUI/CQIconResource.cpp.new + mv copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + touch -r copasi/report/CReportDefinitionVector.cpp copasi/report/CReportDefinitionVector.cpp.new + mv copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + touch -r copasi/report/CReportDefinition.cpp copasi/report/CReportDefinition.cpp.new + mv copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + touch -r copasi/report/CReportBody.cpp copasi/report/CReportBody.cpp.new + mv copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReport.cpp.new copasi/report/CReport.cpp + touch -r copasi/report/CReport.cpp copasi/report/CReport.cpp.new + mv copasi/report/CReport.cpp.new copasi/report/CReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + touch -r copasi/report/COutputAssistant.cpp copasi/report/COutputAssistant.cpp.new + mv copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + touch -r copasi/report/CKeyFactory.cpp copasi/report/CKeyFactory.cpp.new + mv copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + touch -r copasi/report/CDataHandler.cpp copasi/report/CDataHandler.cpp.new + mv copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + touch -r copasi/randomGenerator/Cr250.cpp copasi/randomGenerator/Cr250.cpp.new + mv copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + touch -r copasi/randomGenerator/Cmt19937.cpp copasi/randomGenerator/Cmt19937.cpp.new + mv copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + touch -r copasi/randomGenerator/CRandom.cpp copasi/randomGenerator/CRandom.cpp.new + mv copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + touch -r copasi/randomGenerator/CPermutation.cpp copasi/randomGenerator/CPermutation.cpp.new + mv copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + touch -r copasi/qlayout/CQZoomableView.cpp copasi/qlayout/CQZoomableView.cpp.new + mv copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + touch -r copasi/qlayout/CQStyledGraphicsItem.cpp copasi/qlayout/CQStyledGraphicsItem.cpp.new + mv copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + touch -r copasi/qlayout/CQRoundedRect.cpp copasi/qlayout/CQRoundedRect.cpp.new + mv copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + touch -r copasi/qlayout/CQRenderConverter.cpp copasi/qlayout/CQRenderConverter.cpp.new + mv copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + touch -r copasi/qlayout/CQLayoutView.cpp copasi/qlayout/CQLayoutView.cpp.new + mv copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + touch -r copasi/qlayout/CQLayoutScene.cpp copasi/qlayout/CQLayoutScene.cpp.new + mv copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + touch -r copasi/qlayout/CQLabelGraphicsItem.cpp copasi/qlayout/CQLabelGraphicsItem.cpp.new + mv copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + touch -r copasi/qlayout/CQElementProperties.cpp copasi/qlayout/CQElementProperties.cpp.new + mv copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + touch -r copasi/qlayout/CQEffectDescriptionEdit.cpp copasi/qlayout/CQEffectDescriptionEdit.cpp.new + mv copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + touch -r copasi/qlayout/CQEffectDescription.cpp copasi/qlayout/CQEffectDescription.cpp.new + mv copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + touch -r copasi/qlayout/CQCopasiGraphicsItem.cpp copasi/qlayout/CQCopasiGraphicsItem.cpp.new + mv copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + touch -r copasi/qlayout/CQCopasiEffect.cpp copasi/qlayout/CQCopasiEffect.cpp.new + mv copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + touch -r copasi/qlayout/CQCopasiAnimation.cpp copasi/qlayout/CQCopasiAnimation.cpp.new + mv copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + touch -r copasi/qlayout/CQConnectionGraphicsItem.cpp copasi/qlayout/CQConnectionGraphicsItem.cpp.new + mv copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + touch -r copasi/qlayout/CQAnimationWindow.cpp copasi/qlayout/CQAnimationWindow.cpp.new + mv copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + touch -r copasi/qlayout/CQAnimationSettingsEditor.cpp copasi/qlayout/CQAnimationSettingsEditor.cpp.new + mv copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + touch -r copasi/qlayout/CQAnimationControls.cpp copasi/qlayout/CQAnimationControls.cpp.new + mv copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + touch -r copasi/pvmtest/pvmtest.cpp copasi/pvmtest/pvmtest.cpp.new + mv copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + touch -r copasi/plotUI/scrollzoomer.cpp copasi/plotUI/scrollzoomer.cpp.new + mv copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + touch -r copasi/plotUI/scrollbar.cpp copasi/plotUI/scrollbar.cpp.new + mv copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + touch -r copasi/plotUI/plotwindow.cpp copasi/plotUI/plotwindow.cpp.new + mv copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + touch -r copasi/plotUI/curve2dwidget.cpp copasi/plotUI/curve2dwidget.cpp.new + mv copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + touch -r copasi/plotUI/HistoWidget.cpp copasi/plotUI/HistoWidget.cpp.new + mv copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + touch -r copasi/plotUI/CSpectorgramData.cpp copasi/plotUI/CSpectorgramData.cpp.new + mv copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + touch -r copasi/plotUI/CQwtPlot.cpp copasi/plotUI/CQwtPlot.cpp.new + mv copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + touch -r copasi/plotUI/CQtChartsPlot.cpp copasi/plotUI/CQtChartsPlot.cpp.new + mv copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + touch -r copasi/plotUI/CQSpectogramWidget.cpp copasi/plotUI/CQSpectogramWidget.cpp.new + mv copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + touch -r copasi/plotUI/CQPlotSubwidget.cpp copasi/plotUI/CQPlotSubwidget.cpp.new + mv copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + touch -r copasi/plotUI/CQPlotEditWidget.cpp copasi/plotUI/CQPlotEditWidget.cpp.new + mv copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + touch -r copasi/plotUI/CQPlotColors.cpp copasi/plotUI/CQPlotColors.cpp.new + mv copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + touch -r copasi/plotUI/CQMarchingSquares.cpp copasi/plotUI/CQMarchingSquares.cpp.new + mv copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + touch -r copasi/plotUI/CQExtender.cpp copasi/plotUI/CQExtender.cpp.new + mv copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + touch -r copasi/plotUI/CQDataVizPlot.cpp copasi/plotUI/CQDataVizPlot.cpp.new + mv copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + touch -r copasi/plotUI/CQCustomPlot.cpp copasi/plotUI/CQCustomPlot.cpp.new + mv copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + touch -r copasi/plotUI/CQAdvancedPlotSettings.cpp copasi/plotUI/CQAdvancedPlotSettings.cpp.new + mv copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + touch -r copasi/plotUI/CPlotSpectogram.cpp copasi/plotUI/CPlotSpectogram.cpp.new + mv copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + touch -r copasi/plotUI/CPlotInterface.cpp copasi/plotUI/CPlotInterface.cpp.new + mv copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + touch -r copasi/plotUI/COutputHandlerPlot.cpp copasi/plotUI/COutputHandlerPlot.cpp.new + mv copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + touch -r copasi/plotUI/CLinearColorMap.cpp copasi/plotUI/CLinearColorMap.cpp.new + mv copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + touch -r copasi/plotUI/CHistoCurveData.cpp copasi/plotUI/CHistoCurveData.cpp.new + mv copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + touch -r copasi/plotUI/CBandedGraphData.cpp copasi/plotUI/CBandedGraphData.cpp.new + mv copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + touch -r copasi/plotUI/C2DPlotCurve.cpp copasi/plotUI/C2DPlotCurve.cpp.new + mv copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + touch -r copasi/plotUI/C2DCurveData.cpp copasi/plotUI/C2DCurveData.cpp.new + mv copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + touch -r copasi/plotUI/BandedGraphWidget.cpp copasi/plotUI/BandedGraphWidget.cpp.new + mv copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + touch -r copasi/plot/CPlotSpecification.cpp copasi/plot/CPlotSpecification.cpp.new + mv copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + touch -r copasi/plot/CPlotItem.cpp copasi/plot/CPlotItem.cpp.new + mv copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + touch -r copasi/plot/CPlotColors.cpp copasi/plot/CPlotColors.cpp.new + mv copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + touch -r copasi/plot/COutputDefinitionVector.cpp copasi/plot/COutputDefinitionVector.cpp.new + mv copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + touch -r copasi/parameterFitting/CFitTask.cpp copasi/parameterFitting/CFitTask.cpp.new + mv copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + touch -r copasi/parameterFitting/CFitProblem.cpp copasi/parameterFitting/CFitProblem.cpp.new + mv copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + touch -r copasi/parameterFitting/CFitItem.cpp copasi/parameterFitting/CFitItem.cpp.new + mv copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + touch -r copasi/parameterFitting/CExperimentSet.cpp copasi/parameterFitting/CExperimentSet.cpp.new + mv copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + touch -r copasi/parameterFitting/CExperimentObjectMap.cpp copasi/parameterFitting/CExperimentObjectMap.cpp.new + mv copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + touch -r copasi/parameterFitting/CExperimentFileInfo.cpp copasi/parameterFitting/CExperimentFileInfo.cpp.new + mv copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + touch -r copasi/parameterFitting/CExperiment.cpp copasi/parameterFitting/CExperiment.cpp.new + mv copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + touch -r copasi/output/COutputHandler.cpp copasi/output/COutputHandler.cpp.new + mv copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + touch -r copasi/oscillation/COscillationTask.cpp copasi/oscillation/COscillationTask.cpp.new + mv copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + touch -r copasi/oscillation/COscillationProblem.cpp copasi/oscillation/COscillationProblem.cpp.new + mv copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + touch -r copasi/oscillation/COscillationMethodIntegrate.cpp copasi/oscillation/COscillationMethodIntegrate.cpp.new + mv copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + touch -r copasi/oscillation/COscillationMethod.cpp copasi/oscillation/COscillationMethod.cpp.new + mv copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + touch -r copasi/optimization/FminBrent.cpp copasi/optimization/FminBrent.cpp.new + mv copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + touch -r copasi/optimization/CTruncatedNewton.cpp copasi/optimization/CTruncatedNewton.cpp.new + mv copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + touch -r copasi/optimization/CRealProblem.cpp copasi/optimization/CRealProblem.cpp.new + mv copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + touch -r copasi/optimization/CRandomSearch.cpp copasi/optimization/CRandomSearch.cpp.new + mv copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + touch -r copasi/optimization/CPraxis.cpp copasi/optimization/CPraxis.cpp.new + mv copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + touch -r copasi/optimization/COptTask.cpp copasi/optimization/COptTask.cpp.new + mv copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + touch -r copasi/optimization/COptProblem.cpp copasi/optimization/COptProblem.cpp.new + mv copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + touch -r copasi/optimization/COptPopulationMethod.cpp copasi/optimization/COptPopulationMethod.cpp.new + mv copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + touch -r copasi/optimization/COptMethodTruncatedNewton.cpp copasi/optimization/COptMethodTruncatedNewton.cpp.new + mv copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + touch -r copasi/optimization/COptMethodSteepestDescent.cpp copasi/optimization/COptMethodSteepestDescent.cpp.new + mv copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + touch -r copasi/optimization/COptMethodStatistics.cpp copasi/optimization/COptMethodStatistics.cpp.new + mv copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + touch -r copasi/optimization/COptMethodSS.cpp copasi/optimization/COptMethodSS.cpp.new + mv copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + touch -r copasi/optimization/COptMethodSRES.cpp copasi/optimization/COptMethodSRES.cpp.new + mv copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + touch -r copasi/optimization/COptMethodSA.cpp copasi/optimization/COptMethodSA.cpp.new + mv copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + touch -r copasi/optimization/COptMethodPraxis.cpp copasi/optimization/COptMethodPraxis.cpp.new + mv copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + touch -r copasi/optimization/COptMethodPS.cpp copasi/optimization/COptMethodPS.cpp.new + mv copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + touch -r copasi/optimization/COptMethodNelderMead.cpp copasi/optimization/COptMethodNelderMead.cpp.new + mv copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + touch -r copasi/optimization/COptMethodNL2SOL.cpp copasi/optimization/COptMethodNL2SOL.cpp.new + mv copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + touch -r copasi/optimization/COptMethodLevenbergMarquardt.cpp copasi/optimization/COptMethodLevenbergMarquardt.cpp.new + mv copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + touch -r copasi/optimization/COptMethodHookeJeeves.cpp copasi/optimization/COptMethodHookeJeeves.cpp.new + mv copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + touch -r copasi/optimization/COptMethodGASR.cpp copasi/optimization/COptMethodGASR.cpp.new + mv copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + touch -r copasi/optimization/COptMethodGA.cpp copasi/optimization/COptMethodGA.cpp.new + mv copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + touch -r copasi/optimization/COptMethodEP.cpp copasi/optimization/COptMethodEP.cpp.new + mv copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + touch -r copasi/optimization/COptMethodDE.cpp copasi/optimization/COptMethodDE.cpp.new + mv copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + touch -r copasi/optimization/COptMethodCoranaWalk.cpp copasi/optimization/COptMethodCoranaWalk.cpp.new + mv copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + touch -r copasi/optimization/COptMethod.cpp copasi/optimization/COptMethod.cpp.new + mv copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + touch -r copasi/optimization/COptLogItem.cpp copasi/optimization/COptLogItem.cpp.new + mv copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + touch -r copasi/optimization/COptLogEntry.cpp copasi/optimization/COptLogEntry.cpp.new + mv copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + touch -r copasi/optimization/COptLog.cpp copasi/optimization/COptLog.cpp.new + mv copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + touch -r copasi/optimization/COptItem.cpp copasi/optimization/COptItem.cpp.new + mv copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + touch -r copasi/optimization/CNL2SOL.cpp copasi/optimization/CNL2SOL.cpp.new + mv copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + touch -r copasi/odepack++/dstoda.cpp copasi/odepack++/dstoda.cpp.new + mv copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + touch -r copasi/odepack++/dsolsy.cpp copasi/odepack++/dsolsy.cpp.new + mv copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + touch -r copasi/odepack++/drcheck.cpp copasi/odepack++/drcheck.cpp.new + mv copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + touch -r copasi/odepack++/dprja.cpp copasi/odepack++/dprja.cpp.new + mv copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + touch -r copasi/odepack++/dmnorm.cpp copasi/odepack++/dmnorm.cpp.new + mv copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + touch -r copasi/odepack++/dintdy.cpp copasi/odepack++/dintdy.cpp.new + mv copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + touch -r copasi/odepack++/dfnorm.cpp copasi/odepack++/dfnorm.cpp.new + mv copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + touch -r copasi/odepack++/dewset.cpp copasi/odepack++/dewset.cpp.new + mv copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + touch -r copasi/odepack++/decsol.cpp copasi/odepack++/decsol.cpp.new + mv copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + touch -r copasi/odepack++/dcfode.cpp copasi/odepack++/dcfode.cpp.new + mv copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + touch -r copasi/odepack++/dc_decsol.cpp copasi/odepack++/dc_decsol.cpp.new + mv copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + touch -r copasi/odepack++/dbnorm.cpp copasi/odepack++/dbnorm.cpp.new + mv copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + touch -r copasi/odepack++/common.cpp copasi/odepack++/common.cpp.new + mv copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + touch -r copasi/odepack++/Cxerrwd.cpp copasi/odepack++/Cxerrwd.cpp.new + mv copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + touch -r copasi/odepack++/CRadau5.cpp copasi/odepack++/CRadau5.cpp.new + mv copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + touch -r copasi/odepack++/CLSODAR.cpp copasi/odepack++/CLSODAR.cpp.new + mv copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + touch -r copasi/odepack++/CLSODA.cpp copasi/odepack++/CLSODA.cpp.new + mv copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + touch -r copasi/odepack++/CInternalSolver.cpp copasi/odepack++/CInternalSolver.cpp.new + mv copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + touch -r copasi/moieties/CMoietiesTask.cpp copasi/moieties/CMoietiesTask.cpp.new + mv copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + touch -r copasi/moieties/CMoietiesProblem.cpp copasi/moieties/CMoietiesProblem.cpp.new + mv copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + touch -r copasi/moieties/CMoietiesMethod.cpp copasi/moieties/CMoietiesMethod.cpp.new + mv copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CState.cpp.new copasi/model/CState.cpp + touch -r copasi/model/CState.cpp copasi/model/CState.cpp.new + mv copasi/model/CState.cpp.new copasi/model/CState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + touch -r copasi/model/CReactionInterface.cpp copasi/model/CReactionInterface.cpp.new + mv copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + touch -r copasi/model/CReaction.cpp copasi/model/CReaction.cpp.new + mv copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + touch -r copasi/model/CObjectLists.cpp copasi/model/CObjectLists.cpp.new + mv copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + touch -r copasi/model/CMoiety.cpp copasi/model/CMoiety.cpp.new + mv copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + touch -r copasi/model/CModelValue.cpp copasi/model/CModelValue.cpp.new + mv copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + touch -r copasi/model/CModelParameterSet.cpp copasi/model/CModelParameterSet.cpp.new + mv copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + touch -r copasi/model/CModelParameterGroup.cpp copasi/model/CModelParameterGroup.cpp.new + mv copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + touch -r copasi/model/CModelParameter.cpp copasi/model/CModelParameter.cpp.new + mv copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + touch -r copasi/model/CModelMerging.cpp copasi/model/CModelMerging.cpp.new + mv copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + touch -r copasi/model/CModelExpansion.cpp copasi/model/CModelExpansion.cpp.new + mv copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + touch -r copasi/model/CModelAnalyzer.cpp copasi/model/CModelAnalyzer.cpp.new + mv copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModel.cpp.new copasi/model/CModel.cpp + touch -r copasi/model/CModel.cpp copasi/model/CModel.cpp.new + mv copasi/model/CModel.cpp.new copasi/model/CModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + touch -r copasi/model/CMetabNameInterface.cpp copasi/model/CMetabNameInterface.cpp.new + mv copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + touch -r copasi/model/CMetab.cpp copasi/model/CMetab.cpp.new + mv copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + touch -r copasi/model/CMMLOutput.cpp copasi/model/CMMLOutput.cpp.new + mv copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + touch -r copasi/model/CEvent.cpp copasi/model/CEvent.cpp.new + mv copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + touch -r copasi/model/CCompartment.cpp copasi/model/CCompartment.cpp.new + mv copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + touch -r copasi/model/CChemEqParser_yacc.cpp copasi/model/CChemEqParser_yacc.cpp.new + mv copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + touch -r copasi/model/CChemEqParser_lex.cpp copasi/model/CChemEqParser_lex.cpp.new + mv copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + touch -r copasi/model/CChemEqParser.cpp copasi/model/CChemEqParser.cpp.new + mv copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + touch -r copasi/model/CChemEqInterface.cpp copasi/model/CChemEqInterface.cpp.new + mv copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + touch -r copasi/model/CChemEqElement.cpp copasi/model/CChemEqElement.cpp.new + mv copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + touch -r copasi/model/CChemEq.cpp copasi/model/CChemEq.cpp.new + mv copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + touch -r copasi/model/CAnnotation.cpp copasi/model/CAnnotation.cpp.new + mv copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + touch -r copasi/miase/CMiaseTask.cpp copasi/miase/CMiaseTask.cpp.new + mv copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + touch -r copasi/miase/CMiaseSimulation.cpp copasi/miase/CMiaseSimulation.cpp.new + mv copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + touch -r copasi/miase/CMiaseParser.cpp copasi/miase/CMiaseParser.cpp.new + mv copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + touch -r copasi/miase/CMiaseOutput.cpp copasi/miase/CMiaseOutput.cpp.new + mv copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + touch -r copasi/miase/CMiaseModel.cpp copasi/miase/CMiaseModel.cpp.new + mv copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + touch -r copasi/miase/CMiaseML.cpp copasi/miase/CMiaseML.cpp.new + mv copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + touch -r copasi/miase/CMiaseBase.cpp copasi/miase/CMiaseBase.cpp.new + mv copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + touch -r copasi/math/CMathUpdateSequence.cpp copasi/math/CMathUpdateSequence.cpp.new + mv copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + touch -r copasi/math/CMathReaction.cpp copasi/math/CMathReaction.cpp.new + mv copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + touch -r copasi/math/CMathObject.cpp copasi/math/CMathObject.cpp.new + mv copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + touch -r copasi/math/CMathHistory.cpp copasi/math/CMathHistory.cpp.new + mv copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + touch -r copasi/math/CMathExpression.cpp copasi/math/CMathExpression.cpp.new + mv copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + touch -r copasi/math/CMathEventQueue.cpp copasi/math/CMathEventQueue.cpp.new + mv copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + touch -r copasi/math/CMathEvent.cpp copasi/math/CMathEvent.cpp.new + mv copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + touch -r copasi/math/CMathEnum.cpp copasi/math/CMathEnum.cpp.new + mv copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + touch -r copasi/math/CMathDerive.cpp copasi/math/CMathDerive.cpp.new + mv copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + touch -r copasi/math/CMathDependencyNodeIterator.cpp copasi/math/CMathDependencyNodeIterator.cpp.new + mv copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + touch -r copasi/math/CMathDependencyNode.cpp copasi/math/CMathDependencyNode.cpp.new + mv copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + touch -r copasi/math/CMathDependencyGraph.cpp copasi/math/CMathDependencyGraph.cpp.new + mv copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + touch -r copasi/math/CMathDelay.cpp copasi/math/CMathDelay.cpp.new + mv copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + touch -r copasi/math/CMathContainer.cpp copasi/math/CMathContainer.cpp.new + mv copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + touch -r copasi/math/CJitExpression.cpp copasi/math/CJitExpression.cpp.new + mv copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + touch -r copasi/math/CJitCompilerImplementation.cpp copasi/math/CJitCompilerImplementation.cpp.new + mv copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + touch -r copasi/math/CJitCompiler.cpp copasi/math/CJitCompiler.cpp.new + mv copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + touch -r copasi/lyap/CLyapWolfMethod.cpp copasi/lyap/CLyapWolfMethod.cpp.new + mv copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + touch -r copasi/lyap/CLyapTask.cpp copasi/lyap/CLyapTask.cpp.new + mv copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + touch -r copasi/lyap/CLyapProblem.cpp copasi/lyap/CLyapProblem.cpp.new + mv copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + touch -r copasi/lyap/CLyapMethod.cpp copasi/lyap/CLyapMethod.cpp.new + mv copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + touch -r copasi/lna/CLNATask.cpp copasi/lna/CLNATask.cpp.new + mv copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + touch -r copasi/lna/CLNAProblem.cpp copasi/lna/CLNAProblem.cpp.new + mv copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + touch -r copasi/lna/CLNAMethod.cpp copasi/lna/CLNAMethod.cpp.new + mv copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + touch -r copasi/layoutUI/RGTextureSpec.cpp copasi/layoutUI/RGTextureSpec.cpp.new + mv copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + touch -r copasi/layoutUI/ParaPanel.cpp copasi/layoutUI/ParaPanel.cpp.new + mv copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + touch -r copasi/layoutUI/NodeSizePanel.cpp copasi/layoutUI/NodeSizePanel.cpp.new + mv copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + touch -r copasi/layoutUI/FontChooser.cpp copasi/layoutUI/FontChooser.cpp.new + mv copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + touch -r copasi/layoutUI/CVisParameters.cpp copasi/layoutUI/CVisParameters.cpp.new + mv copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + touch -r copasi/layoutUI/CSimSummaryInfo.cpp copasi/layoutUI/CSimSummaryInfo.cpp.new + mv copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + touch -r copasi/layoutUI/CQSpringLayoutParameterWindow.cpp copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new + mv copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + touch -r copasi/layoutUI/CQScreenshotOptionsDialog.cpp copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new + mv copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + touch -r copasi/layoutUI/CQQtImageTexturizer.cpp copasi/layoutUI/CQQtImageTexturizer.cpp.new + mv copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + touch -r copasi/layoutUI/CQPlayerControlWidget.cpp copasi/layoutUI/CQPlayerControlWidget.cpp.new + mv copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + touch -r copasi/layoutUI/CQNewMainWindow.cpp copasi/layoutUI/CQNewMainWindow.cpp.new + mv copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + touch -r copasi/layoutUI/CQLayoutThread.cpp copasi/layoutUI/CQLayoutThread.cpp.new + mv copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + touch -r copasi/layoutUI/CQLayoutMainWindow.cpp copasi/layoutUI/CQLayoutMainWindow.cpp.new + mv copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + touch -r copasi/layoutUI/CQGLViewport.cpp copasi/layoutUI/CQGLViewport.cpp.new + mv copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + touch -r copasi/layoutUI/CQGLNetworkPainter.cpp copasi/layoutUI/CQGLNetworkPainter.cpp.new + mv copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + touch -r copasi/layoutUI/CQGLLayoutViewer.cpp copasi/layoutUI/CQGLLayoutViewer.cpp.new + mv copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + touch -r copasi/layoutUI/CQGLLayoutPainter.cpp copasi/layoutUI/CQGLLayoutPainter.cpp.new + mv copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + touch -r copasi/layoutUI/CQFontRenderer.cpp copasi/layoutUI/CQFontRenderer.cpp.new + mv copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + touch -r copasi/layoutUI/CQCurrentValueTable.cpp copasi/layoutUI/CQCurrentValueTable.cpp.new + mv copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + touch -r copasi/layoutUI/CQAutolayoutWizard.cpp copasi/layoutUI/CQAutolayoutWizard.cpp.new + mv copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + touch -r copasi/layoutUI/CLabel.cpp copasi/layoutUI/CLabel.cpp.new + mv copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + touch -r copasi/layoutUI/CGraphNode.cpp copasi/layoutUI/CGraphNode.cpp.new + mv copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + touch -r copasi/layoutUI/CGraphCurve.cpp copasi/layoutUI/CGraphCurve.cpp.new + mv copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + touch -r copasi/layoutUI/CDataEntity.cpp copasi/layoutUI/CDataEntity.cpp.new + mv copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + touch -r copasi/layoutUI/CCompartmentGraphNode.cpp copasi/layoutUI/CCompartmentGraphNode.cpp.new + mv copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + touch -r copasi/layoutUI/CArrow.cpp copasi/layoutUI/CArrow.cpp.new + mv copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + touch -r copasi/layoutUI/BezierCurve.cpp copasi/layoutUI/BezierCurve.cpp.new + mv copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + touch -r copasi/layout/utility_classes.cpp copasi/layout/utility_classes.cpp.new + mv copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + touch -r copasi/layout/SBMLDocumentLoader.cpp copasi/layout/SBMLDocumentLoader.cpp.new + mv copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + touch -r copasi/layout/CListOfLayouts.cpp copasi/layout/CListOfLayouts.cpp.new + mv copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + touch -r copasi/layout/CLayoutState.cpp copasi/layout/CLayoutState.cpp.new + mv copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + touch -r copasi/layout/CLayoutInitializer.cpp copasi/layout/CLayoutInitializer.cpp.new + mv copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + touch -r copasi/layout/CLayoutEngine.cpp copasi/layout/CLayoutEngine.cpp.new + mv copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + touch -r copasi/layout/CLayout.cpp copasi/layout/CLayout.cpp.new + mv copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + touch -r copasi/layout/CLUnresolvedReferenceException.cpp copasi/layout/CLUnresolvedReferenceException.cpp.new + mv copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + touch -r copasi/layout/CLTransformation2D.cpp copasi/layout/CLTransformation2D.cpp.new + mv copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + touch -r copasi/layout/CLTransformation.cpp copasi/layout/CLTransformation.cpp.new + mv copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + touch -r copasi/layout/CLText.cpp copasi/layout/CLText.cpp.new + mv copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + touch -r copasi/layout/CLStyle.cpp copasi/layout/CLStyle.cpp.new + mv copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + touch -r copasi/layout/CLSimpleImageTexturizer.cpp copasi/layout/CLSimpleImageTexturizer.cpp.new + mv copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + touch -r copasi/layout/CLRenderResolver.cpp copasi/layout/CLRenderResolver.cpp.new + mv copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + touch -r copasi/layout/CLRenderPoint.cpp copasi/layout/CLRenderPoint.cpp.new + mv copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + touch -r copasi/layout/CLRenderInformationBase.cpp copasi/layout/CLRenderInformationBase.cpp.new + mv copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + touch -r copasi/layout/CLRenderFlattener.cpp copasi/layout/CLRenderFlattener.cpp.new + mv copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + touch -r copasi/layout/CLRenderCurve.cpp copasi/layout/CLRenderCurve.cpp.new + mv copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + touch -r copasi/layout/CLRenderCubicBezier.cpp copasi/layout/CLRenderCubicBezier.cpp.new + mv copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + touch -r copasi/layout/CLRelAbsVector.cpp copasi/layout/CLRelAbsVector.cpp.new + mv copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + touch -r copasi/layout/CLRectangle.cpp copasi/layout/CLRectangle.cpp.new + mv copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + touch -r copasi/layout/CLReactionGlyph.cpp copasi/layout/CLReactionGlyph.cpp.new + mv copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + touch -r copasi/layout/CLRadialGradient.cpp copasi/layout/CLRadialGradient.cpp.new + mv copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + touch -r copasi/layout/CLPolygon.cpp copasi/layout/CLPolygon.cpp.new + mv copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + touch -r copasi/layout/CLLocalStyle.cpp copasi/layout/CLLocalStyle.cpp.new + mv copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + touch -r copasi/layout/CLLocalRenderInformation.cpp copasi/layout/CLLocalRenderInformation.cpp.new + mv copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + touch -r copasi/layout/CLLinearGradient.cpp copasi/layout/CLLinearGradient.cpp.new + mv copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + touch -r copasi/layout/CLLineEnding.cpp copasi/layout/CLLineEnding.cpp.new + mv copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + touch -r copasi/layout/CLLayoutRenderer.cpp copasi/layout/CLLayoutRenderer.cpp.new + mv copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + touch -r copasi/layout/CLImageTexturizer.cpp copasi/layout/CLImageTexturizer.cpp.new + mv copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + touch -r copasi/layout/CLImage.cpp copasi/layout/CLImage.cpp.new + mv copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + touch -r copasi/layout/CLGroup.cpp copasi/layout/CLGroup.cpp.new + mv copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + touch -r copasi/layout/CLGraphicalPrimitive2D.cpp copasi/layout/CLGraphicalPrimitive2D.cpp.new + mv copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + touch -r copasi/layout/CLGraphicalPrimitive1D.cpp copasi/layout/CLGraphicalPrimitive1D.cpp.new + mv copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + touch -r copasi/layout/CLGraphicalObject.cpp copasi/layout/CLGraphicalObject.cpp.new + mv copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + touch -r copasi/layout/CLGradientStops.cpp copasi/layout/CLGradientStops.cpp.new + mv copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + touch -r copasi/layout/CLGradientStop.cpp copasi/layout/CLGradientStop.cpp.new + mv copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + touch -r copasi/layout/CLGradientBase.cpp copasi/layout/CLGradientBase.cpp.new + mv copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + touch -r copasi/layout/CLGlyphs.cpp copasi/layout/CLGlyphs.cpp.new + mv copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + touch -r copasi/layout/CLGlobalStyle.cpp copasi/layout/CLGlobalStyle.cpp.new + mv copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + touch -r copasi/layout/CLGlobalRenderInformation.cpp copasi/layout/CLGlobalRenderInformation.cpp.new + mv copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + touch -r copasi/layout/CLEllipse.cpp copasi/layout/CLEllipse.cpp.new + mv copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + touch -r copasi/layout/CLDefaultStyles.cpp copasi/layout/CLDefaultStyles.cpp.new + mv copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + touch -r copasi/layout/CLCurve.cpp copasi/layout/CLCurve.cpp.new + mv copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + touch -r copasi/layout/CLColorDefinition.cpp copasi/layout/CLColorDefinition.cpp.new + mv copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + touch -r copasi/layout/CLBase.cpp copasi/layout/CLBase.cpp.new + mv copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + touch -r copasi/layout/CCopasiSpringLayout.cpp copasi/layout/CCopasiSpringLayout.cpp.new + mv copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + touch -r copasi/layout/CAbstractLayoutInterface.cpp copasi/layout/CAbstractLayoutInterface.cpp.new + mv copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + touch -r copasi/function/CNodeK.cpp copasi/function/CNodeK.cpp.new + mv copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + touch -r copasi/function/CMassAction.cpp copasi/function/CMassAction.cpp.new + mv copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + touch -r copasi/function/CKinFunction.cpp copasi/function/CKinFunction.cpp.new + mv copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + touch -r copasi/function/CFunctionParameters.cpp copasi/function/CFunctionParameters.cpp.new + mv copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + touch -r copasi/function/CFunctionParameter.cpp copasi/function/CFunctionParameter.cpp.new + mv copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + touch -r copasi/function/CFunctionDB.cpp copasi/function/CFunctionDB.cpp.new + mv copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + touch -r copasi/function/CFunctionAnalyzer.cpp copasi/function/CFunctionAnalyzer.cpp.new + mv copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + touch -r copasi/function/CFunction.cpp copasi/function/CFunction.cpp.new + mv copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + touch -r copasi/function/CExpression.cpp copasi/function/CExpression.cpp.new + mv copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + touch -r copasi/function/CEvaluationTree.cpp copasi/function/CEvaluationTree.cpp.new + mv copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + touch -r copasi/function/CEvaluationParser_yacc.cpp copasi/function/CEvaluationParser_yacc.cpp.new + mv copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + touch -r copasi/function/CEvaluationNodeWhiteSpace.cpp copasi/function/CEvaluationNodeWhiteSpace.cpp.new + mv copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + touch -r copasi/function/CEvaluationNodeVector.cpp copasi/function/CEvaluationNodeVector.cpp.new + mv copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + touch -r copasi/function/CEvaluationNodeVariable.cpp copasi/function/CEvaluationNodeVariable.cpp.new + mv copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + touch -r copasi/function/CEvaluationNodeUnit.cpp copasi/function/CEvaluationNodeUnit.cpp.new + mv copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + touch -r copasi/function/CEvaluationNodeStructure.cpp copasi/function/CEvaluationNodeStructure.cpp.new + mv copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + touch -r copasi/function/CEvaluationNodeOperator.cpp copasi/function/CEvaluationNodeOperator.cpp.new + mv copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + touch -r copasi/function/CEvaluationNodeObject.cpp copasi/function/CEvaluationNodeObject.cpp.new + mv copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + touch -r copasi/function/CEvaluationNodeNumber.cpp copasi/function/CEvaluationNodeNumber.cpp.new + mv copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + touch -r copasi/function/CEvaluationNodeLogical.cpp copasi/function/CEvaluationNodeLogical.cpp.new + mv copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + touch -r copasi/function/CEvaluationNodeFunction.cpp copasi/function/CEvaluationNodeFunction.cpp.new + mv copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + touch -r copasi/function/CEvaluationNodeDelay.cpp copasi/function/CEvaluationNodeDelay.cpp.new + mv copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + touch -r copasi/function/CEvaluationNodeConstant.cpp copasi/function/CEvaluationNodeConstant.cpp.new + mv copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + touch -r copasi/function/CEvaluationNodeChoice.cpp copasi/function/CEvaluationNodeChoice.cpp.new + mv copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + touch -r copasi/function/CEvaluationNodeCall.cpp copasi/function/CEvaluationNodeCall.cpp.new + mv copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + touch -r copasi/function/CEvaluationNode.cpp copasi/function/CEvaluationNode.cpp.new + mv copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + touch -r copasi/function/CEvaluationLexer_lex.cpp copasi/function/CEvaluationLexer_lex.cpp.new + mv copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + touch -r copasi/function/CDerive.cpp copasi/function/CDerive.cpp.new + mv copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + touch -r copasi/function/CCallParameters.cpp copasi/function/CCallParameters.cpp.new + mv copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + touch -r copasi/elementaryFluxModes/CZeroSet.cpp copasi/elementaryFluxModes/CZeroSet.cpp.new + mv copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + touch -r copasi/elementaryFluxModes/CTableauMatrix.cpp copasi/elementaryFluxModes/CTableauMatrix.cpp.new + mv copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + touch -r copasi/elementaryFluxModes/CTableauLine.cpp copasi/elementaryFluxModes/CTableauLine.cpp.new + mv copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + touch -r copasi/elementaryFluxModes/CStepMatrixColumn.cpp copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new + mv copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + touch -r copasi/elementaryFluxModes/CStepMatrix.cpp copasi/elementaryFluxModes/CStepMatrix.cpp.new + mv copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + touch -r copasi/elementaryFluxModes/CSSAMethod.cpp copasi/elementaryFluxModes/CSSAMethod.cpp.new + mv copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + touch -r copasi/elementaryFluxModes/CFluxScore.cpp copasi/elementaryFluxModes/CFluxScore.cpp.new + mv copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + touch -r copasi/elementaryFluxModes/CFluxMode.cpp copasi/elementaryFluxModes/CFluxMode.cpp.new + mv copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + touch -r copasi/elementaryFluxModes/CEFMTask.cpp copasi/elementaryFluxModes/CEFMTask.cpp.new + mv copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + touch -r copasi/elementaryFluxModes/CEFMProblem.cpp copasi/elementaryFluxModes/CEFMProblem.cpp.new + mv copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + touch -r copasi/elementaryFluxModes/CEFMMethod.cpp copasi/elementaryFluxModes/CEFMMethod.cpp.new + mv copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + touch -r copasi/elementaryFluxModes/CEFMAlgorithm.cpp copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new + mv copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeNode.cpp copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTree.cpp copasi/elementaryFluxModes/CBitPatternTree.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternMethod.cpp copasi/elementaryFluxModes/CBitPatternMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + touch -r copasi/crosssection/CCrossSectionTask.cpp copasi/crosssection/CCrossSectionTask.cpp.new + mv copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + touch -r copasi/crosssection/CCrossSectionProblem.cpp copasi/crosssection/CCrossSectionProblem.cpp.new + mv copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + touch -r copasi/crosssection/CCrossSectionMethod.cpp copasi/crosssection/CCrossSectionMethod.cpp.new + mv copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + touch -r copasi/core/CRootContainer.cpp copasi/core/CRootContainer.cpp.new + mv copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + touch -r copasi/core/CRegisteredCommonName.cpp copasi/core/CRegisteredCommonName.cpp.new + mv copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + touch -r copasi/core/CObjectInterface.cpp copasi/core/CObjectInterface.cpp.new + mv copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + touch -r copasi/core/CDataTimer.cpp copasi/core/CDataTimer.cpp.new + mv copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + touch -r copasi/core/CDataString.cpp copasi/core/CDataString.cpp.new + mv copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + touch -r copasi/core/CDataObjectMap.cpp copasi/core/CDataObjectMap.cpp.new + mv copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + touch -r copasi/core/CDataObject.cpp copasi/core/CDataObject.cpp.new + mv copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + touch -r copasi/core/CDataContainer.cpp copasi/core/CDataContainer.cpp.new + mv copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + touch -r copasi/core/CDataArray.cpp copasi/core/CDataArray.cpp.new + mv copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCore.cpp.new copasi/core/CCore.cpp + touch -r copasi/core/CCore.cpp copasi/core/CCore.cpp.new + mv copasi/core/CCore.cpp.new copasi/core/CCore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + touch -r copasi/core/CCommonName.cpp copasi/core/CCommonName.cpp.new + mv copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + touch -r copasi/core/CArrayElementReference.cpp copasi/core/CArrayElementReference.cpp.new + mv copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArray.cpp.new copasi/core/CArray.cpp + touch -r copasi/core/CArray.cpp copasi/core/CArray.cpp.new + mv copasi/core/CArray.cpp.new copasi/core/CArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + touch -r copasi/compareExpressions/unittests/test_simplify.cpp copasi/compareExpressions/unittests/test_simplify.cpp.new + mv copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + touch -r copasi/compareExpressions/unittests/test_normalform.cpp copasi/compareExpressions/unittests/test_normalform.cpp.new + mv copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + touch -r copasi/compareExpressions/unittests/test_node_conversion.cpp copasi/compareExpressions/unittests/test_node_conversion.cpp.new + mv copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + touch -r copasi/compareExpressions/unittests/test_expression_comparison.cpp copasi/compareExpressions/unittests/test_expression_comparison.cpp.new + mv copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + touch -r copasi/compareExpressions/unittests/test_depth_first_iterator.cpp copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new + mv copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + touch -r copasi/compareExpressions/unittests/test_compare_utilities.cpp copasi/compareExpressions/unittests/test_compare_utilities.cpp.new + mv copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + touch -r copasi/compareExpressions/unittests/test_cnormallogical.cpp copasi/compareExpressions/unittests/test_cnormallogical.cpp.new + mv copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + touch -r copasi/compareExpressions/unittests/test_biomodels217_expression.cpp copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new + mv copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + touch -r copasi/compareExpressions/unittests/test.cpp copasi/compareExpressions/unittests/test.cpp.new + mv copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + touch -r copasi/compareExpressions/stresstest/stress_test.cpp copasi/compareExpressions/stresstest/stress_test.cpp.new + mv copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + touch -r copasi/compareExpressions/compare_utilities.cpp copasi/compareExpressions/compare_utilities.cpp.new + mv copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + touch -r copasi/compareExpressions/ConvertToCEvaluationNode.cpp copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new + mv copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + touch -r copasi/compareExpressions/CNormalTranslation.cpp copasi/compareExpressions/CNormalTranslation.cpp.new + mv copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + touch -r copasi/compareExpressions/CNormalSum.cpp copasi/compareExpressions/CNormalSum.cpp.new + mv copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + touch -r copasi/compareExpressions/CNormalProduct.cpp copasi/compareExpressions/CNormalProduct.cpp.new + mv copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + touch -r copasi/compareExpressions/CNormalLogicalItem.cpp copasi/compareExpressions/CNormalLogicalItem.cpp.new + mv copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + touch -r copasi/compareExpressions/CNormalLogical.cpp copasi/compareExpressions/CNormalLogical.cpp.new + mv copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + touch -r copasi/compareExpressions/CNormalLcm.cpp copasi/compareExpressions/CNormalLcm.cpp.new + mv copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + touch -r copasi/compareExpressions/CNormalItemPower.cpp copasi/compareExpressions/CNormalItemPower.cpp.new + mv copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + touch -r copasi/compareExpressions/CNormalItem.cpp copasi/compareExpressions/CNormalItem.cpp.new + mv copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + touch -r copasi/compareExpressions/CNormalGeneralPower.cpp copasi/compareExpressions/CNormalGeneralPower.cpp.new + mv copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + touch -r copasi/compareExpressions/CNormalFunction.cpp copasi/compareExpressions/CNormalFunction.cpp.new + mv copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + touch -r copasi/compareExpressions/CNormalFraction.cpp copasi/compareExpressions/CNormalFraction.cpp.new + mv copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + touch -r copasi/compareExpressions/CNormalChoiceLogical.cpp copasi/compareExpressions/CNormalChoiceLogical.cpp.new + mv copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + touch -r copasi/compareExpressions/CNormalChoice.cpp copasi/compareExpressions/CNormalChoice.cpp.new + mv copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + touch -r copasi/compareExpressions/CNormalCall.cpp copasi/compareExpressions/CNormalCall.cpp.new + mv copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + touch -r copasi/compareExpressions/CNormalBase.cpp copasi/compareExpressions/CNormalBase.cpp.new + mv copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + touch -r copasi/compareExpressions/CEvaluationNodeNormalizer.cpp copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new + mv copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + touch -r copasi/commandline/COptions.cpp copasi/commandline/COptions.cpp.new + mv copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + touch -r copasi/commandline/COptionParser.cpp copasi/commandline/COptionParser.cpp.new + mv copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + touch -r copasi/commandline/CLocaleString.cpp copasi/commandline/CLocaleString.cpp.new + mv copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + touch -r copasi/commandline/CConfigurationFile.cpp copasi/commandline/CConfigurationFile.cpp.new + mv copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + touch -r copasi/bindings/python/local.cpp copasi/bindings/python/local.cpp.new + mv copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + touch -r copasi/bindings/perl/local.cpp copasi/bindings/perl/local.cpp.new + mv copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + touch -r copasi/bindings/octave/local.cpp copasi/bindings/octave/local.cpp.new + mv copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + touch -r copasi/bindings/java/local.cpp copasi/bindings/java/local.cpp.new + mv copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + touch -r copasi/bindings/csharp/local.cpp copasi/bindings/csharp/local.cpp.new + mv copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + touch -r copasi/bindings/cpp_examples/runSedML/runSedML.cpp copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new + mv copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + touch -r copasi/bindings/cpp_examples/runScan/runScan.cpp copasi/bindings/cpp_examples/runScan/runScan.cpp.new + mv copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + touch -r copasi/bindings/cpp_examples/renderLayout/main.cpp copasi/bindings/cpp_examples/renderLayout/main.cpp.new + mv copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + touch -r copasi/bindings/cpp_examples/renameActiveReport/main.cpp copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new + mv copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + touch -r copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new + mv copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + touch -r copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new + mv copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + touch -r copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new + mv copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + touch -r copasi/bindings/cpp_examples/example9/example9.cpp copasi/bindings/cpp_examples/example9/example9.cpp.new + mv copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + touch -r copasi/bindings/cpp_examples/example8/example8.cpp copasi/bindings/cpp_examples/example8/example8.cpp.new + mv copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + touch -r copasi/bindings/cpp_examples/example7/example7.cpp copasi/bindings/cpp_examples/example7/example7.cpp.new + mv copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + touch -r copasi/bindings/cpp_examples/example6/example6.cpp copasi/bindings/cpp_examples/example6/example6.cpp.new + mv copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + touch -r copasi/bindings/cpp_examples/example5/example5.cpp copasi/bindings/cpp_examples/example5/example5.cpp.new + mv copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + touch -r copasi/bindings/cpp_examples/example4/example4.cpp copasi/bindings/cpp_examples/example4/example4.cpp.new + mv copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + touch -r copasi/bindings/cpp_examples/example3/example3.cpp copasi/bindings/cpp_examples/example3/example3.cpp.new + mv copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + touch -r copasi/bindings/cpp_examples/example2/example2.cpp copasi/bindings/cpp_examples/example2/example2.cpp.new + mv copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + touch -r copasi/bindings/cpp_examples/example10/example10.cpp copasi/bindings/cpp_examples/example10/example10.cpp.new + mv copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + touch -r copasi/bindings/cpp_examples/example1/example1.cpp copasi/bindings/cpp_examples/example1/example1.cpp.new + mv copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + touch -r copasi/bindings/cpp_examples/changeValues/changeValues.cpp copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new + mv copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + touch -r copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new + mv copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + touch -r copasi/bindings/cpp_examples/assignParameterSet/main.cpp copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new + mv copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + touch -r copasi/bindings/common/local_common.cpp copasi/bindings/common/local_common.cpp.new + mv copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + touch -r copasi/bindings/common/downcast_common.cpp copasi/bindings/common/downcast_common.cpp.new + mv copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + touch -r copasi/bindings/R/local.cpp copasi/bindings/R/local.cpp.new + mv copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + touch -r copasi/bindings/R/RProcessCallback.cpp copasi/bindings/R/RProcessCallback.cpp.new + mv copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + touch -r copasi/barChart/qwt3dScale.cpp copasi/barChart/qwt3dScale.cpp.new + mv copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + touch -r copasi/barChart/qwt3dPlot.cpp copasi/barChart/qwt3dPlot.cpp.new + mv copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + touch -r copasi/barChart/qwt3dColor.cpp copasi/barChart/qwt3dColor.cpp.new + mv copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + touch -r copasi/barChart/qwt3dBars.cpp copasi/barChart/qwt3dBars.cpp.new + mv copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + touch -r copasi/barChart/CQBaseWidget.cpp copasi/barChart/CQBaseWidget.cpp.new + mv copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + touch -r copasi/barChart/CQ3DBarsModifier.cpp copasi/barChart/CQ3DBarsModifier.cpp.new + mv copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + touch -r copasi/analytics/CStatistics.cpp copasi/analytics/CStatistics.cpp.new + mv copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + touch -r copasi/analytics/CAnalyticsTask.cpp copasi/analytics/CAnalyticsTask.cpp.new + mv copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + touch -r copasi/analytics/CAnalyticsProblem.cpp copasi/analytics/CAnalyticsProblem.cpp.new + mv copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + touch -r copasi/analytics/CAnalyticsMethod.cpp copasi/analytics/CAnalyticsMethod.cpp.new + mv copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + touch -r copasi/ViewCurrentUI/worker.cpp copasi/ViewCurrentUI/worker.cpp.new + mv copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + touch -r copasi/ViewCurrentUI/main.cpp copasi/ViewCurrentUI/main.cpp.new + mv copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + touch -r copasi/ViewCurrentUI/arguments.cpp copasi/ViewCurrentUI/arguments.cpp.new + mv copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + touch -r copasi/UI/qtUtilities.cpp copasi/UI/qtUtilities.cpp.new + mv copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + touch -r copasi/UI/parametertable.cpp copasi/UI/parametertable.cpp.new + mv copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + touch -r copasi/UI/objectdebug.cpp copasi/UI/objectdebug.cpp.new + mv copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + touch -r copasi/UI/listviews.cpp copasi/UI/listviews.cpp.new + mv copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + touch -r copasi/UI/copasiui3window.cpp copasi/UI/copasiui3window.cpp.new + mv copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + touch -r copasi/UI/copasiWidget.cpp copasi/UI/copasiWidget.cpp.new + mv copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + touch -r copasi/UI/TaskWidget.cpp copasi/UI/TaskWidget.cpp.new + mv copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + touch -r copasi/UI/SteadyStateWidget.cpp copasi/UI/SteadyStateWidget.cpp.new + mv copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + touch -r copasi/UI/StateSubwidget.cpp copasi/UI/StateSubwidget.cpp.new + mv copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + touch -r copasi/UI/SliderSettingsDialog.cpp copasi/UI/SliderSettingsDialog.cpp.new + mv copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + touch -r copasi/UI/SliderDialog.cpp copasi/UI/SliderDialog.cpp.new + mv copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + touch -r copasi/UI/SensitivitiesWidget.cpp copasi/UI/SensitivitiesWidget.cpp.new + mv copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + touch -r copasi/UI/SensWidgetComboBox.cpp copasi/UI/SensWidgetComboBox.cpp.new + mv copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + touch -r copasi/UI/ScanWidget.cpp copasi/UI/ScanWidget.cpp.new + mv copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + touch -r copasi/UI/ReactionsWidget1.cpp copasi/UI/ReactionsWidget1.cpp.new + mv copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + touch -r copasi/UI/ObjectBrowserWidget.cpp copasi/UI/ObjectBrowserWidget.cpp.new + mv copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + touch -r copasi/UI/ObjectBrowserItem.cpp copasi/UI/ObjectBrowserItem.cpp.new + mv copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + touch -r copasi/UI/ObjectBrowserDialog.cpp copasi/UI/ObjectBrowserDialog.cpp.new + mv copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + touch -r copasi/UI/MyLineEdit.cpp copasi/UI/MyLineEdit.cpp.new + mv copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + touch -r copasi/UI/FunctionWidget1.cpp copasi/UI/FunctionWidget1.cpp.new + mv copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + touch -r copasi/UI/DefaultplotDialog.cpp copasi/UI/DefaultplotDialog.cpp.new + mv copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + touch -r copasi/UI/DataModelGUI.cpp copasi/UI/DataModelGUI.cpp.new + mv copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + touch -r copasi/UI/CopasiSlider.cpp copasi/UI/CopasiSlider.cpp.new + mv copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + touch -r copasi/UI/CopasiFileDialog.cpp copasi/UI/CopasiFileDialog.cpp.new + mv copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + touch -r copasi/UI/CWindowInterface.cpp copasi/UI/CWindowInterface.cpp.new + mv copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + touch -r copasi/UI/CUpDownSubwidget.cpp copasi/UI/CUpDownSubwidget.cpp.new + mv copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + touch -r copasi/UI/CScanWidgetTask.cpp copasi/UI/CScanWidgetTask.cpp.new + mv copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + touch -r copasi/UI/CScanWidgetScan.cpp copasi/UI/CScanWidgetScan.cpp.new + mv copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + touch -r copasi/UI/CScanWidgetRepeat.cpp copasi/UI/CScanWidgetRepeat.cpp.new + mv copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + touch -r copasi/UI/CScanWidgetRandom.cpp copasi/UI/CScanWidgetRandom.cpp.new + mv copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + touch -r copasi/UI/CScanItemData.cpp copasi/UI/CScanItemData.cpp.new + mv copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + touch -r copasi/UI/CScanContainerWidget.cpp copasi/UI/CScanContainerWidget.cpp.new + mv copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + touch -r copasi/UI/CQValidatorUnit.cpp copasi/UI/CQValidatorUnit.cpp.new + mv copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + touch -r copasi/UI/CQValidator.cpp copasi/UI/CQValidator.cpp.new + mv copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + touch -r copasi/UI/CQUpdatesWidget.cpp copasi/UI/CQUpdatesWidget.cpp.new + mv copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + touch -r copasi/UI/CQUpdateAvogadro.cpp copasi/UI/CQUpdateAvogadro.cpp.new + mv copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + touch -r copasi/UI/CQUnitsWidget.cpp copasi/UI/CQUnitsWidget.cpp.new + mv copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + touch -r copasi/UI/CQUnitDetail.cpp copasi/UI/CQUnitDetail.cpp.new + mv copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + touch -r copasi/UI/CQUnitDM.cpp copasi/UI/CQUnitDM.cpp.new + mv copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + touch -r copasi/UI/CQUndoTester.cpp copasi/UI/CQUndoTester.cpp.new + mv copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + touch -r copasi/UI/CQTrajectoryWidget.cpp copasi/UI/CQTrajectoryWidget.cpp.new + mv copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + touch -r copasi/UI/CQTimeSeriesWidget.cpp copasi/UI/CQTimeSeriesWidget.cpp.new + mv copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + touch -r copasi/UI/CQTimeSeriesDM.cpp copasi/UI/CQTimeSeriesDM.cpp.new + mv copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + touch -r copasi/UI/CQTimeSensWidget.cpp copasi/UI/CQTimeSensWidget.cpp.new + mv copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + touch -r copasi/UI/CQThread.cpp copasi/UI/CQThread.cpp.new + mv copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + touch -r copasi/UI/CQTextDialog.cpp copasi/UI/CQTextDialog.cpp.new + mv copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + touch -r copasi/UI/CQTaskThread.cpp copasi/UI/CQTaskThread.cpp.new + mv copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + touch -r copasi/UI/CQTaskMethodWidget.cpp copasi/UI/CQTaskMethodWidget.cpp.new + mv copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + touch -r copasi/UI/CQTaskHeaderWidget.cpp copasi/UI/CQTaskHeaderWidget.cpp.new + mv copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + touch -r copasi/UI/CQTaskBtnWidget.cpp copasi/UI/CQTaskBtnWidget.cpp.new + mv copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + touch -r copasi/UI/CQTableWidget.cpp copasi/UI/CQTableWidget.cpp.new + mv copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + touch -r copasi/UI/CQTableView.cpp copasi/UI/CQTableView.cpp.new + mv copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + touch -r copasi/UI/CQTabWidget.cpp copasi/UI/CQTabWidget.cpp.new + mv copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + touch -r copasi/UI/CQTSSAWidget.cpp copasi/UI/CQTSSAWidget.cpp.new + mv copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + touch -r copasi/UI/CQTSSATimeScaleWidget.cpp copasi/UI/CQTSSATimeScaleWidget.cpp.new + mv copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + touch -r copasi/UI/CQTSSAResultWidget.cpp copasi/UI/CQTSSAResultWidget.cpp.new + mv copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + touch -r copasi/UI/CQTSSAResultSubWidget.cpp copasi/UI/CQTSSAResultSubWidget.cpp.new + mv copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + touch -r copasi/UI/CQSteadyStateResult.cpp copasi/UI/CQSteadyStateResult.cpp.new + mv copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + touch -r copasi/UI/CQStartValueReset.cpp copasi/UI/CQStartValueReset.cpp.new + mv copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + touch -r copasi/UI/CQSplashWidget.cpp copasi/UI/CQSplashWidget.cpp.new + mv copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + touch -r copasi/UI/CQSpinBoxDelegate.cpp copasi/UI/CQSpinBoxDelegate.cpp.new + mv copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + touch -r copasi/UI/CQSpeciesWidget.cpp copasi/UI/CQSpeciesWidget.cpp.new + mv copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + touch -r copasi/UI/CQSpeciesDetail.cpp copasi/UI/CQSpeciesDetail.cpp.new + mv copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + touch -r copasi/UI/CQSpecieDM.cpp copasi/UI/CQSpecieDM.cpp.new + mv copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + touch -r copasi/UI/CQSortFilterProxyModel.cpp copasi/UI/CQSortFilterProxyModel.cpp.new + mv copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + touch -r copasi/UI/CQSimpleSelectionTree.cpp copasi/UI/CQSimpleSelectionTree.cpp.new + mv copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + touch -r copasi/UI/CQSensResultWidget.cpp copasi/UI/CQSensResultWidget.cpp.new + mv copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + touch -r copasi/UI/CQScrolledDependenciesWidget.cpp copasi/UI/CQScrolledDependenciesWidget.cpp.new + mv copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + touch -r copasi/UI/CQScanWidgetParameterSet.cpp copasi/UI/CQScanWidgetParameterSet.cpp.new + mv copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + touch -r copasi/UI/CQSEDMLImportDialog.cpp copasi/UI/CQSEDMLImportDialog.cpp.new + mv copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + touch -r copasi/UI/CQSEDMLFileDialog.cpp copasi/UI/CQSEDMLFileDialog.cpp.new + mv copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + touch -r copasi/UI/CQSBMLFileDialog.cpp copasi/UI/CQSBMLFileDialog.cpp.new + mv copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + touch -r copasi/UI/CQReportsWidget.cpp copasi/UI/CQReportsWidget.cpp.new + mv copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + touch -r copasi/UI/CQReportListItem.cpp copasi/UI/CQReportListItem.cpp.new + mv copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + touch -r copasi/UI/CQReportDefinitionSelect.cpp copasi/UI/CQReportDefinitionSelect.cpp.new + mv copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + touch -r copasi/UI/CQReportDefinition.cpp copasi/UI/CQReportDefinition.cpp.new + mv copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + touch -r copasi/UI/CQReportDM.cpp copasi/UI/CQReportDM.cpp.new + mv copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + touch -r copasi/UI/CQReactionsWidget.cpp copasi/UI/CQReactionsWidget.cpp.new + mv copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + touch -r copasi/UI/CQReactionDM.cpp copasi/UI/CQReactionDM.cpp.new + mv copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + touch -r copasi/UI/CQPushButtonDelegate.cpp copasi/UI/CQPushButtonDelegate.cpp.new + mv copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + touch -r copasi/UI/CQProgressItemText.cpp copasi/UI/CQProgressItemText.cpp.new + mv copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + touch -r copasi/UI/CQProgressItemBar.cpp copasi/UI/CQProgressItemBar.cpp.new + mv copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + touch -r copasi/UI/CQProgressItem.cpp copasi/UI/CQProgressItem.cpp.new + mv copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + touch -r copasi/UI/CQProgressDialog.cpp copasi/UI/CQProgressDialog.cpp.new + mv copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + touch -r copasi/UI/CQPreferenceDialog.cpp copasi/UI/CQPreferenceDialog.cpp.new + mv copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + touch -r copasi/UI/CQPlotsWidget.cpp copasi/UI/CQPlotsWidget.cpp.new + mv copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + touch -r copasi/UI/CQPlotDM.cpp copasi/UI/CQPlotDM.cpp.new + mv copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + touch -r copasi/UI/CQParameterSetsWidget.cpp copasi/UI/CQParameterSetsWidget.cpp.new + mv copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + touch -r copasi/UI/CQParameterSetsDM.cpp copasi/UI/CQParameterSetsDM.cpp.new + mv copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + touch -r copasi/UI/CQParameterResultItemModel.cpp copasi/UI/CQParameterResultItemModel.cpp.new + mv copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + touch -r copasi/UI/CQParameterOverviewWidget.cpp copasi/UI/CQParameterOverviewWidget.cpp.new + mv copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + touch -r copasi/UI/CQParameterOverviewDM.cpp copasi/UI/CQParameterOverviewDM.cpp.new + mv copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + touch -r copasi/UI/CQParameterGroupView.cpp copasi/UI/CQParameterGroupView.cpp.new + mv copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + touch -r copasi/UI/CQParameterGroupDM.cpp copasi/UI/CQParameterGroupDM.cpp.new + mv copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + touch -r copasi/UI/CQParameterEstimationResult.cpp copasi/UI/CQParameterEstimationResult.cpp.new + mv copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + touch -r copasi/UI/CQOscillationTaskWidget.cpp copasi/UI/CQOscillationTaskWidget.cpp.new + mv copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + touch -r copasi/UI/CQOptimizationWidget.cpp copasi/UI/CQOptimizationWidget.cpp.new + mv copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + touch -r copasi/UI/CQOptimizationResult.cpp copasi/UI/CQOptimizationResult.cpp.new + mv copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + touch -r copasi/UI/CQOptPopulation.cpp copasi/UI/CQOptPopulation.cpp.new + mv copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + touch -r copasi/UI/CQNotes.cpp copasi/UI/CQNotes.cpp.new + mv copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + touch -r copasi/UI/CQNameSelectionDialog.cpp copasi/UI/CQNameSelectionDialog.cpp.new + mv copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + touch -r copasi/UI/CQMultipleSelectionDialog.cpp copasi/UI/CQMultipleSelectionDialog.cpp.new + mv copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + touch -r copasi/UI/CQMoietiesTaskWidget.cpp copasi/UI/CQMoietiesTaskWidget.cpp.new + mv copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + touch -r copasi/UI/CQMoietiesTaskResult.cpp copasi/UI/CQMoietiesTaskResult.cpp.new + mv copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + touch -r copasi/UI/CQModelWidget.cpp copasi/UI/CQModelWidget.cpp.new + mv copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + touch -r copasi/UI/CQModelValue.cpp copasi/UI/CQModelValue.cpp.new + mv copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + touch -r copasi/UI/CQMmlScrollView.cpp copasi/UI/CQMmlScrollView.cpp.new + mv copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + touch -r copasi/UI/CQMessageBox.cpp copasi/UI/CQMessageBox.cpp.new + mv copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + touch -r copasi/UI/CQMergingData.cpp copasi/UI/CQMergingData.cpp.new + mv copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + touch -r copasi/UI/CQMatrixDialog.cpp copasi/UI/CQMatrixDialog.cpp.new + mv copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + touch -r copasi/UI/CQMathMatrixWidget.cpp copasi/UI/CQMathMatrixWidget.cpp.new + mv copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + touch -r copasi/UI/CQMCAWidget.cpp copasi/UI/CQMCAWidget.cpp.new + mv copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + touch -r copasi/UI/CQLyapWidget.cpp copasi/UI/CQLyapWidget.cpp.new + mv copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + touch -r copasi/UI/CQLyapResultWidget.cpp copasi/UI/CQLyapResultWidget.cpp.new + mv copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + touch -r copasi/UI/CQLayoutsWidget.cpp copasi/UI/CQLayoutsWidget.cpp.new + mv copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + touch -r copasi/UI/CQLayoutsDM.cpp copasi/UI/CQLayoutsDM.cpp.new + mv copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + touch -r copasi/UI/CQLNAWidget.cpp copasi/UI/CQLNAWidget.cpp.new + mv copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + touch -r copasi/UI/CQGlobalQuantityDM.cpp copasi/UI/CQGlobalQuantityDM.cpp.new + mv copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + touch -r copasi/UI/CQGlobalQuantitiesWidget.cpp copasi/UI/CQGlobalQuantitiesWidget.cpp.new + mv copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + touch -r copasi/UI/CQFunctionsWidget.cpp copasi/UI/CQFunctionsWidget.cpp.new + mv copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + touch -r copasi/UI/CQFunctionDM.cpp copasi/UI/CQFunctionDM.cpp.new + mv copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + touch -r copasi/UI/CQFluxModeDM.cpp copasi/UI/CQFluxModeDM.cpp.new + mv copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + touch -r copasi/UI/CQFittingWidget.cpp copasi/UI/CQFittingWidget.cpp.new + mv copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + touch -r copasi/UI/CQFittingResultTab1.cpp copasi/UI/CQFittingResultTab1.cpp.new + mv copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + touch -r copasi/UI/CQFittingResult.cpp copasi/UI/CQFittingResult.cpp.new + mv copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + touch -r copasi/UI/CQFittingItemWidget.cpp copasi/UI/CQFittingItemWidget.cpp.new + mv copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + touch -r copasi/UI/CQExpressionWidget.cpp copasi/UI/CQExpressionWidget.cpp.new + mv copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + touch -r copasi/UI/CQExpressionMmlStackedWidget.cpp copasi/UI/CQExpressionMmlStackedWidget.cpp.new + mv copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + touch -r copasi/UI/CQExperimentSelection.cpp copasi/UI/CQExperimentSelection.cpp.new + mv copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + touch -r copasi/UI/CQExperimentData.cpp copasi/UI/CQExperimentData.cpp.new + mv copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + touch -r copasi/UI/CQExpandModelData.cpp copasi/UI/CQExpandModelData.cpp.new + mv copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + touch -r copasi/UI/CQEventsWidget.cpp copasi/UI/CQEventsWidget.cpp.new + mv copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + touch -r copasi/UI/CQEventWidget1.cpp copasi/UI/CQEventWidget1.cpp.new + mv copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + touch -r copasi/UI/CQEventDM.cpp copasi/UI/CQEventDM.cpp.new + mv copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + touch -r copasi/UI/CQEFMWidget.cpp copasi/UI/CQEFMWidget.cpp.new + mv copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + touch -r copasi/UI/CQEFMSpeciesDM.cpp copasi/UI/CQEFMSpeciesDM.cpp.new + mv copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + touch -r copasi/UI/CQEFMResultWidget.cpp copasi/UI/CQEFMResultWidget.cpp.new + mv copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + touch -r copasi/UI/CQEFMReactionDM.cpp copasi/UI/CQEFMReactionDM.cpp.new + mv copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + touch -r copasi/UI/CQEFMNetReactionDM.cpp copasi/UI/CQEFMNetReactionDM.cpp.new + mv copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + touch -r copasi/UI/CQEFMListWidget.cpp copasi/UI/CQEFMListWidget.cpp.new + mv copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + touch -r copasi/UI/CQDifferentialEquations.cpp copasi/UI/CQDifferentialEquations.cpp.new + mv copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + touch -r copasi/UI/CQDependencyWidget.cpp copasi/UI/CQDependencyWidget.cpp.new + mv copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + touch -r copasi/UI/CQDependencyDialog.cpp copasi/UI/CQDependencyDialog.cpp.new + mv copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + touch -r copasi/UI/CQDependenciesWidget.cpp copasi/UI/CQDependenciesWidget.cpp.new + mv copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + touch -r copasi/UI/CQDateTimeEditDelegate.cpp copasi/UI/CQDateTimeEditDelegate.cpp.new + mv copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + touch -r copasi/UI/CQCrossSectionTaskWidget.cpp copasi/UI/CQCrossSectionTaskWidget.cpp.new + mv copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + touch -r copasi/UI/CQCopasiApplication.cpp copasi/UI/CQCopasiApplication.cpp.new + mv copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + touch -r copasi/UI/CQCompartmentsWidget.cpp copasi/UI/CQCompartmentsWidget.cpp.new + mv copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + touch -r copasi/UI/CQCompartmentDM.cpp copasi/UI/CQCompartmentDM.cpp.new + mv copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + touch -r copasi/UI/CQCompartmentCopyOptions.cpp copasi/UI/CQCompartmentCopyOptions.cpp.new + mv copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + touch -r copasi/UI/CQCompartment.cpp copasi/UI/CQCompartment.cpp.new + mv copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + touch -r copasi/UI/CQComboDelegate.cpp copasi/UI/CQComboDelegate.cpp.new + mv copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + touch -r copasi/UI/CQCheckModelWindow.cpp copasi/UI/CQCheckModelWindow.cpp.new + mv copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + touch -r copasi/UI/CQBrowserPaneDM.cpp copasi/UI/CQBrowserPaneDM.cpp.new + mv copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + touch -r copasi/UI/CQBrowserPane.cpp copasi/UI/CQBrowserPane.cpp.new + mv copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + touch -r copasi/UI/CQBaseTreeDataModel.cpp copasi/UI/CQBaseTreeDataModel.cpp.new + mv copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + touch -r copasi/UI/CQBaseDataModel.cpp copasi/UI/CQBaseDataModel.cpp.new + mv copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + touch -r copasi/UI/CQArrayAnnotationsWidgetDM.cpp copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new + mv copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + touch -r copasi/UI/CQArrayAnnotationsWidget.cpp copasi/UI/CQArrayAnnotationsWidget.cpp.new + mv copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + touch -r copasi/UI/CQAnalyticsWidget.cpp copasi/UI/CQAnalyticsWidget.cpp.new + mv copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + touch -r copasi/UI/CProvenanceDialog.cpp copasi/UI/CProvenanceDialog.cpp.new + mv copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + touch -r copasi/UI/CProgressBar.cpp copasi/UI/CProgressBar.cpp.new + mv copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + touch -r copasi/UI/CMCAResultWidget.cpp copasi/UI/CMCAResultWidget.cpp.new + mv copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + touch -r copasi/UI/CMCAResultSubwidget.cpp copasi/UI/CMCAResultSubwidget.cpp.new + mv copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + touch -r copasi/UI/CLNAResultWidget.cpp copasi/UI/CLNAResultWidget.cpp.new + mv copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + touch -r copasi/UI/CLNAResultSubwidget.cpp copasi/UI/CLNAResultSubwidget.cpp.new + mv copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + touch -r copasi/UI/CEntityProvenanceDialog.cpp copasi/UI/CEntityProvenanceDialog.cpp.new + mv copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + touch -r copasi/UI/CCopasiSelectionWidget.cpp copasi/UI/CCopasiSelectionWidget.cpp.new + mv copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + touch -r copasi/UI/CCopasiSelectionDialog.cpp copasi/UI/CCopasiSelectionDialog.cpp.new + mv copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlotSelectionDialog.cpp copasi/UI/CCopasiPlotSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlot2YSelectionDialog.cpp copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + touch -r copasi/UI/CColorScale.cpp copasi/UI/CColorScale.cpp.new + mv copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + touch -r copasi/UI/AboutDialog.cpp copasi/UI/AboutDialog.cpp.new + mv copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + touch -r copasi/Provenance/CProvenanceXMLWriter.cpp copasi/Provenance/CProvenanceXMLWriter.cpp.new + mv copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + touch -r copasi/OpenMP/CRandomContext.cpp copasi/OpenMP/CRandomContext.cpp.new + mv copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + touch -r copasi/OpenMP/CMathContext.cpp copasi/OpenMP/CMathContext.cpp.new + mv copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + touch -r copasi/OpenMP/CContext.cpp copasi/OpenMP/CContext.cpp.new + mv copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + touch -r copasi/MIRIAMUI/CQReferenceDM.cpp copasi/MIRIAMUI/CQReferenceDM.cpp.new + mv copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeViewItem.cpp copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeView.cpp copasi/MIRIAMUI/CQRDFTreeView.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + touch -r copasi/MIRIAMUI/CQModifiedDM.cpp copasi/MIRIAMUI/CQModifiedDM.cpp.new + mv copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + touch -r copasi/MIRIAMUI/CQMiriamWidget.cpp copasi/MIRIAMUI/CQMiriamWidget.cpp.new + mv copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + touch -r copasi/MIRIAMUI/CQCreatorDM.cpp copasi/MIRIAMUI/CQCreatorDM.cpp.new + mv copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + touch -r copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new + mv copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + touch -r copasi/MIRIAM/CReference.cpp copasi/MIRIAM/CReference.cpp.new + mv copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + touch -r copasi/MIRIAM/CRaptorInit.cpp copasi/MIRIAM/CRaptorInit.cpp.new + mv copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + touch -r copasi/MIRIAM/CRDFWriter.cpp copasi/MIRIAM/CRDFWriter.cpp.new + mv copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + touch -r copasi/MIRIAM/CRDFUtilities.cpp copasi/MIRIAM/CRDFUtilities.cpp.new + mv copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + touch -r copasi/MIRIAM/CRDFTriplet.cpp copasi/MIRIAM/CRDFTriplet.cpp.new + mv copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + touch -r copasi/MIRIAM/CRDFSubject.cpp copasi/MIRIAM/CRDFSubject.cpp.new + mv copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + touch -r copasi/MIRIAM/CRDFPredicate.cpp copasi/MIRIAM/CRDFPredicate.cpp.new + mv copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + touch -r copasi/MIRIAM/CRDFParser.cpp copasi/MIRIAM/CRDFParser.cpp.new + mv copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + touch -r copasi/MIRIAM/CRDFObject.cpp copasi/MIRIAM/CRDFObject.cpp.new + mv copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + touch -r copasi/MIRIAM/CRDFNode.cpp copasi/MIRIAM/CRDFNode.cpp.new + mv copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + touch -r copasi/MIRIAM/CRDFLiteral.cpp copasi/MIRIAM/CRDFLiteral.cpp.new + mv copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + touch -r copasi/MIRIAM/CRDFGraphConverter.cpp copasi/MIRIAM/CRDFGraphConverter.cpp.new + mv copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + touch -r copasi/MIRIAM/CRDFGraph.cpp copasi/MIRIAM/CRDFGraph.cpp.new + mv copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + touch -r copasi/MIRIAM/CModified.cpp copasi/MIRIAM/CModified.cpp.new + mv copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + touch -r copasi/MIRIAM/CModelMIRIAMInfo.cpp copasi/MIRIAM/CModelMIRIAMInfo.cpp.new + mv copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + touch -r copasi/MIRIAM/CMIRIAMResource.cpp copasi/MIRIAM/CMIRIAMResource.cpp.new + mv copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + touch -r copasi/MIRIAM/CCreator.cpp copasi/MIRIAM/CCreator.cpp.new + mv copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + touch -r copasi/MIRIAM/CConstants.cpp copasi/MIRIAM/CConstants.cpp.new + mv copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + touch -r copasi/MIRIAM/CBiologicalDescription.cpp copasi/MIRIAM/CBiologicalDescription.cpp.new + mv copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + touch -r copasi/CopasiUI/main.cpp copasi/CopasiUI/main.cpp.new + mv copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + touch -r copasi/CopasiSE/CopasiSE.cpp copasi/CopasiSE/CopasiSE.cpp.new + mv copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + touch -r copasi/CopasiSBW/SBWTranslator.cpp copasi/CopasiSBW/SBWTranslator.cpp.new + mv copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + touch -r copasi/CopasiDataModel/CInfo.cpp copasi/CopasiDataModel/CInfo.cpp.new + mv copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + touch -r copasi/CopasiDataModel/CDataModel.cpp copasi/CopasiDataModel/CDataModel.cpp.new + mv copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + touch -r copasi/ABiochem/wattstrog.cpp copasi/ABiochem/wattstrog.cpp.new + mv copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + touch -r copasi/ABiochem/clo.cpp copasi/ABiochem/clo.cpp.new + mv copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + touch -r copasi/ABiochem/abiochem.cpp copasi/ABiochem/abiochem.cpp.new + mv copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + touch -r copasi/ABiochem/ab.cpp copasi/ABiochem/ab.cpp.new + mv copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + touch -r copasi/ABiochem/Erdos.cpp copasi/ABiochem/Erdos.cpp.new + mv copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + touch -r copasi/ABiochem/CGene.cpp copasi/ABiochem/CGene.cpp.new + mv copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + touch -r copasi/ABiochem/1d.cpp copasi/ABiochem/1d.cpp.new + mv copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + echo 'Patch #0 (COPASI-fix_install_libpaths.patch):' Patch #0 (COPASI-fix_install_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_install_libpaths --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 879 (offset 36 lines). patching file copasi/bindings/csharp/CMakeLists.txt Hunk #1 succeeded at 164 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/perl/CMakeLists.txt Hunk #1 succeeded at 158 (offset 5 lines). Hunk #2 succeeded at 175 (offset 5 lines). patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 163 (offset -2 lines). patching file copasi/bindings/java/CMakeLists.txt Hunk #1 succeeded at 159 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/octave/CMakeLists.txt Hunk #1 succeeded at 153 (offset 6 lines). Patch #4 (COPASI-fix_exe_permissions.patch): + echo 'Patch #4 (COPASI-fix_exe_permissions.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_exe_permissions --fuzz=0 patching file copasi/CopasiSE/CMakeLists.txt patching file copasi/CopasiUI/CMakeLists.txt Hunk #1 succeeded at 122 (offset 13 lines). Patch #6 (COPASI-libCombine_paths.patch): + echo 'Patch #6 (COPASI-libCombine_paths.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .libCombine_paths --fuzz=0 patching file CMakeModules/FindLIBCOMBINE.cmake Hunk #3 succeeded at 147 (offset 25 lines). Patch #7 (COPASI-find_crossguid2.patch): + echo 'Patch #7 (COPASI-find_crossguid2.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_crossguid2 --fuzz=0 patching file CMakeModules/FindCROSSGUID.cmake Hunk #2 succeeded at 35 (offset 1 line). Hunk #3 succeeded at 54 (offset 2 lines). Hunk #4 succeeded at 86 (offset 3 lines). Patch #8 (COPASI-use_c++17.patch): + echo 'Patch #8 (COPASI-use_c++17.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .use_c++17 --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 129 (offset 11 lines). Patch #9 (COPASI-find_libsedml.patch): + echo 'Patch #9 (COPASI-find_libsedml.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_libsedml --fuzz=0 patching file CMakeModules/FindLIBSEDML.cmake Patch #10 (COPASI-find_sbw.patch): + echo 'Patch #10 (COPASI-find_sbw.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_sbw --fuzz=0 patching file CMakeModules/FindSBW.cmake Patch #12 (COPASI-find_raptor.patch): + echo 'Patch #12 (COPASI-find_raptor.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .find_raptor --fuzz=0 patching file CMakeModules/FindRAPTOR.cmake Patch #13 (COPASI-qwt62.patch): + echo 'Patch #13 (COPASI-qwt62.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .qwt --fuzz=0 patching file copasi/plotUI/C2DCurveData.h patching file copasi/plotUI/C2DPlotCurve.h patching file copasi/plotUI/CBandedGraphData.h patching file copasi/plotUI/CHistoCurveData.h patching file copasi/plotUI/CLinearColorMap.h patching file copasi/plotUI/CPlotSpectogram.h patching file copasi/plotUI/CQwtPlot.cpp patching file copasi/plotUI/CQwtPlot.h patching file copasi/plotUI/CSpectorgramData.h patching file copasi/plotUI/scrollzoomer.cpp patching file copasi/plotUI/scrollzoomer.h Patch #14 (COPASI-4.41.283-fix_missing_header.patch): + echo 'Patch #14 (COPASI-4.41.283-fix_missing_header.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file copasi/plotUI/CQMarchingSquares.cpp Patch #15 (COPASI-find_qcp_libs.patch): + echo 'Patch #15 (COPASI-find_qcp_libs.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file CMakeModules/FindQCP.cmake Patch #16 (COPASI-fix_swig_4.2.0_compatibility.patch): + echo 'Patch #16 (COPASI-fix_swig_4.2.0_compatibility.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file copasi/bindings/common/downcast_common.cpp Patch #11 (COPASI-porting_to_python310.patch): + echo 'Patch #11 (COPASI-porting_to_python310.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .porting_to_python310 --fuzz=0 patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 156 (offset 3 lines). Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch): + echo 'Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file CMakeModules/FindQWT.cmake Hunk #1 succeeded at 19 (offset -5 lines). Hunk #2 succeeded at 30 (offset -5 lines). patching file CMakeModules/FindMML.cmake + sed -e 's|@@libdir@@|/usr/lib64|g' -i CMakeModules/FindQWT.cmake Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch): + echo 'Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .QWTPLOT3D_QT5 --fuzz=0 patching file CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_includedir@@|/usr/include/qt5/qwtplot3d-qt5|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_libdir@@|/usr/lib64|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@_libmml_includedir@@|/usr/include/qt5/libmml-qt5|g' -i CMakeModules/FindMML.cmake + sed -e 's|@@_libmml_libdir@@|/usr/lib64|g' -i CMakeModules/FindMML.cmake + sed -i.bak '/double sqrt(doublereal);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double pow_dd(doublereal *, doublereal *);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/int s_copy(char *, char *, ftnlen, ftnlen);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double sqrt(doublereal);/d' copasi/odepack++/dc_decsol.cpp + sed -i.bak '/double sqrt(doublereal),/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/double pow_dd(doublereal *,/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/C_FLOAT64 d_lg10(C_FLOAT64 *);/d' copasi/optimization/CPraxis.cpp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Y5TIVx + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DCOPASI_OVERRIDE_VERSION:STRING=4.42.284 -DENABLE_PYTHON:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.12 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.12.so -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DENABLE_JIT:BOOL=OFF -DSELECT_QT=Qt5 -DSITE:STRING=fedora -DF2C_INTEGER=int -DF2C_LOGICAL=long '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG' -DCOPASI_INSTALL_C_API=OFF -DCombine_DIR:PATH=/usr/lib64/cmake '-DCMAKE_SHARED_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' '-DCMAKE_EXE_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' -DQT_QMAKE_EXECUTABLE:FILEPATH=/usr/bin/qmake-qt5 -DQWT_VERSION_STRING:STRING=6.2.0 -DQWT_LIBRARY:FILEPATH=/usr/lib64/libqwt-qt5.so -DQWT_INCLUDE_DIR:PATH=/usr/include/qt5/qwt -DBUILD_GUI:BOOL=ON -DBUILD_COPASISBW:BOOL=ON -DENABLE_MML:BOOL=ON -DENABLE_USE_SBMLUNIT=ON -DMML_INCLUDE_DIR:PATH=/usr/include/qt5/libmml-qt5 -DMML_LIBRARY:FILEPATH=/usr/lib64/libmml.so -DENABLE_SBW_INTEGRATION=ON -DBUILD_CXX_EXAMPLES=OFF -DENABLE_COPASI_BANDED_GRAPH:BOOL=ON -DENABLE_COPASI_SEDML:BOOL=ON -DENABLE_COPASI_NONLIN_DYN_OSCILLATION:BOOL=ON -DENABLE_COPASI_EXTUNIT:BOOL=ON -DCOPASI_OVERWRITE_USE_LAPACK:BOOL=ON -DNO_BLAS_WRAP:BOOL=ON -DBLA_VENDOR=Generic -DBLAS_blas_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DLAPACK_lapack_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DCROSSGUID_INCLUDE_DIR:PATH=/usr/include/crossguid2 -DENABLE_COPASI_PARAMETERFITTING_RESIDUAL_SCALING:BOOL=ON -DENABLE_WITH_MERGEMODEL:BOOL=ON -DENABLE_USE_MATH_CONTAINER:BOOL=ON -DLIBSBML_INCLUDE_DIR:PATH=/usr/include/sbml -DLIBSBML_SHARED:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBNUML_LIBRARY:FILEPATH=/usr/lib64/libnuml.so -DEXTRA_INCLUDE_DIRS:STRING=-I/usr/include/numl -DEXPAT_LIBRARY:FILEPATH=/usr/lib64/libexpat.so -DEXPAT_INCLUDE_DIR:PATH=/usr/include -DF2C_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DENABLE_GPROF:BOOL=OFF -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DENABLE_FLEX_BISON:BOOL=ON -DBISON_EXECUTABLE:FILEPATH=/usr/bin/bison -DPREFER_STATIC:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCOPASI_USE_QCUSTOMPLOT:BOOL=ON CMake Warning: No source or binary directory provided. Both will be assumed to be the same as the current working directory, but note that this warning will become a fatal error in future CMake releases. -- The C compiler identification is GNU 13.2.1 -- The CXX compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Looking for strptime -- Looking for strptime - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of void* -- Check size of void* - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of size_t -- Check size of size_t - done -- Performing Test EXPAT_EXPAT_TEST -- Performing Test EXPAT_EXPAT_TEST - Success -- Found EXPAT: /usr/lib64/libexpat.so (found version "2.5.0") -- Found LIBSBML: sbml (found version "5.19.0") -- Found LIBSEDML: /lib64/libsedml.so (found version "2.0.32") -- Found LIBCOMBINE: /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat (found version "0.2.20") -- Found FLEX: /usr/bin/flex (found version "2.6.4") -- Found BISON: /usr/bin/bison (found version "3.8.2") -- A library with BLAS API not found. Please specify library location. -- LAPACK requires BLAS -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- Found CLAPACK: /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so -- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") -- Found LIBUUID: /usr/lib64/libuuid.so (found version "2.39.3") -- Found CROSSGUID: /usr/include/crossguid2 -- Found RAPTOR: /usr/lib64/libraptor.so (found version "1.4.21") -- Found OpenGL: /usr/lib64/libOpenGL.so -- Found QCP: /usr/lib64/libqcustomplot-qt5.so -- Using Qt5 -- Found QWT: /usr/lib64/libqwt-qt5.so -- Found MML: /usr/lib64/libmml.so -- Found SBW: //usr/lib64/libSBW.so -- Found SWIG: /usr/bin/swig (found version "4.1.1") -- Mocing with options: -DWITH_TIME_SENS=1;-DWITH_QT5_VISUALIZATION=1;-DCOPASI_SBW_INTEGRATION=1;-DCOPASI_BANDED_GRAPH=1;-DCOPASI_NONLIN_DYN_OSCILLATION=1;-DQT_USE_TEXTBROWSER=1;-DCOPASI_USE_QWT=1;-DCOPASI_USE_QCUSTOMPLOT=1;-DQWT_VERSION=0x060200 -- Mocing files for subdir: barChart -- Mocing files for subdir: layoutUI -- Mocing files for subdir: MIRIAMUI -- Mocing files for subdir: plotUI -- Mocing files for subdir: tex -- Mocing files for subdir: UI -- Mocing files for subdir: wizard -- Mocing files for subdir: qlayout -- Mocing files for subdir: undoFramework -- Mocing files for subdir: undoUI -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found ZLIB: /lib64/libz.so (found version "1.2.13") -- Found PythonInterp: /usr/bin/python3 (found version "3.12.1") -- Found PythonLibs: /usr/lib64/libpython3.12.so (found version "3.12.1") -- Found Python: /usr/bin/python3.12 (found version "3.12.1") found components: Interpreter -- ----------------------------------------------------------- Building COPASI 4.42.284 (Release) Source Dir = /builddir/build/BUILD/COPASI-Build-284 Binary Dir = /builddir/build/BUILD/COPASI-Build-284 Install Prefix = /usr Dependencies: Vendor = Generic LAPACK Libs = /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so LAPACK LDFLAGS = crossguid Libs = /lib64/libcrossguid2.so;/usr/lib64/libuuid.so cross include = /usr/include/crossguid2 Expat version = 2.5.0 Expat Libs = /usr/lib64/libexpat.so Expat include = /usr/include Raptor version = 1.4.21 Raptor Libs = /usr/lib64/libraptor.so Raptor include = /usr/include libSBML version = 5.19.0 libSBML lib = /usr/lib64/libsbml.so.5.19.0;/usr/lib64/libbz2.so;/usr/lib64/libz.so;minizip;z;/usr/lib64/libxml2.so libSBML include = /usr/include Qt version = 5.15.11 Qt lib = Qt5::Concurrent;Qt5::Core;Qt5::Gui;Qt5::Widgets;Qt5::Network;Qt5::OpenGL;Qt5::PrintSupport;Qt5::Svg;Qt5::Xml;Qt5::DataVisualization Qt include = /usr/include/qt5/;/usr/include/qt5/QtConcurrent;/usr/include/qt5/QtCore;/usr/lib64/qt5//mkspecs/linux-g++;/usr/include/qt5/QtGui;/usr/include/qt5/QtWidgets;/usr/include/qt5/QtNetwork;/usr/include/qt5/QtOpenGL;/usr/include/qt5/QtPrintSupport;/usr/include/qt5/QtSvg;/usr/include/qt5/QtXml;/usr/include/qt5/QtDataVisualization QWT version = 6.2.0 (0x60200) QWT lib = /usr/lib64/libqwt-qt5.so QWT include = /usr/include/qt5/qwt qwtplot3d lib = qwtplot3d include = qtmml lib = /usr/lib64/libmml.so qtmml include = /usr/include/qt5/libmml-qt5 SBW version = SBW lib = //usr/lib64/libSBW.so SBW include = /usr/include libSEDML version = 2.0.32 libSEDML lib = /lib64/libsedml.so libSEDML include = /usr/include Combine version = 0.2.20 Combine lib = /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat Combine include = /usr/include NativeJIT lib = NativeJIT include = NativeJIT CXX Flags = cpu_features lib = cpu_features include = OpenMP Libs = OpenMP CXX Flags = Options: COPASI_EXTUNIT = ON SBW integration = ON Model Merging = ON SEDML support = ON Combine Archive support = ON SDE support = ON GPROF support = OFF UNDO framework = ON Versioning framework = OFF Provenance framework = OFF Analytics Task = OFF Time Sensitivities task = ON JIT Compilation = OFF OpenMP = OFF CXX Flags = -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC Additional Defines = Linux;HAVE_F2C_H;LINUX Language Bindings: SWIG = /usr/bin/swig .NET Bindings = OFF Java Bindings = OFF Python Bindings = ON Perl Bindings = OFF Octave Bindings = OFF R Bindings = OFF Building: COPASI SE = ON COPASI UI = ON C++ Examples = OFF SBML TestRunner = OFF Franks TestRunner = OFF Semantic Testsuite = OFF Stochastic Testsuite = OFF Steady State TestRunner = OFF MCA TestRunner = OFF ----------------------------------------------------------- -- Configuring done (4.0s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP COPASI_OVERWRITE_USE_LAPACK CSHARP_COMPILER ENABLE_COPASI_SEDML ENABLE_USE_MATH_CONTAINER ENABLE_USE_SBMLUNIT ENABLE_WITH_MERGEMODEL QT_QMAKE_EXECUTABLE SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/COPASI-Build-284 + /usr/bin/cmake --build . -j2 --verbose Change Dir: '/builddir/build/BUILD/COPASI-Build-284' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2 /usr/bin/cmake -S/builddir/build/BUILD/COPASI-Build-284 -B/builddir/build/BUILD/COPASI-Build-284 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-Build-284/CMakeFiles /builddir/build/BUILD/COPASI-Build-284//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-core.dir/build.make copasi/CMakeFiles/libCOPASISE-core.dir/depend /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_swig.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASISE-core.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' gmake[2]: Nothing to be done for 'copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-core.dir/build.make copasi/CMakeFiles/libCOPASISE-core.dir/build [ 0%] Built target binding_python_swig gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp:7: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:452:56: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::openCombineArchive(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2222:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2222 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2249:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2249 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2266:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2266 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2071:8: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 2071 | bool result = true; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::importSEDML(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2395:17: warning: unused variable ‘pSEDMLDocument’ [-Wunused-variable] 2395 | SedDocument * pSEDMLDocument = NULL; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2399:18: warning: unused variable ‘pSBMLDocument’ [-Wunused-variable] 2399 | SBMLDocument * pSBMLDocument = NULL; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2400:20: warning: unused variable ‘pLol’ [-Wunused-variable] 2400 | CListOfLayouts * pLol = NULL; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2401:29: warning: unused variable ‘pLotList’ [-Wunused-variable] 2401 | COutputDefinitionVector * pLotList = NULL; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::exportSEDML(const std::string&, bool, int, int, bool, bool, CProcessReport*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2593:17: warning: unused variable ‘pOrigSEDMLDocument’ [-Wunused-variable] 2593 | SedDocument * pOrigSEDMLDocument = NULL; | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CConstants.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:434:1: warning: when initialized here [-Wreorder] 434 | CMIRIAMResource::CMIRIAMResource(const std::string & name, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:446:1: warning: when initialized here [-Wreorder] 446 | CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource & src, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:458:1: warning: when initialized here [-Wreorder] 458 | CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup & group, | ^~~~~~~~~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraph.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraph.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraphConverter.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFLiteral.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFNode.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFObject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFParser.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFPredicate.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFSubject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFTriplet.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFUtilities.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp: In member function ‘char* CRDFWriter::write(const CRDFGraph*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp:99:8: warning: variable ‘success’ set but not used [-Wunused-but-set-variable] 99 | bool success = true; | ^~~~~~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRaptorInit.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArrayElementReference.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCommonName.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCore.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp: In member function ‘void CDataObjectMap::objectRenamed(CDataObject*, const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp:301:16: warning: unused variable ‘success’ [-Wunused-variable] 301 | bool success = (itMap->second.erase(pObject) > 0); | ^~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataString.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataTimer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRegisteredCommonName.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h: In constructor ‘CRootContainer::CRootContainer(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:75:23: warning: ‘CRootContainer::mpUnitDefinitionList’ will be initialized after [-Wreorder] 75 | CUnitDefinitionDB * mpUnitDefinitionList; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:73:23: warning: ‘CConfigurationFile* CRootContainer::mpConfiguration’ [-Wreorder] 73 | CConfigurationFile* mpConfiguration; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:38:1: warning: when initialized here [-Wreorder] 38 | CRootContainer::CRootContainer(const bool & withGUI): | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:114:1: warning: when initialized here [-Wreorder] 114 | CConfigurationFile::CConfigurationFile(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const CConfigurationFile&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:148:1: warning: when initialized here [-Wreorder] 148 | CConfigurationFile::CConfigurationFile(const CConfigurationFile & src, | ^~~~~~~~~~~~~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CLocaleString.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptionParser.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalBase.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalCall.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoiceLogical.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalFraction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalFunction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalGeneralPower.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItemPower.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLcm.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogicalItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets<TYPE>&, TemplateSetOfSets<TYPE>&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:39:16: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 530 | bool tmpRes = target.insert(std::make_pair(tmpSet, it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets<TYPE>&, TemplateSetOfSets<TYPE>&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:41:16: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet<TYPE>&, TemplateSet<TYPE>&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:216:18: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet<TYPE>&, TemplateSet<TYPE>&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:494:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp: In copy constructor ‘CNormalProduct::CNormalProduct(const CNormalProduct&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp:73:12: warning: unused variable ‘result’ [-Wunused-variable] 73 | bool result = this->mItemPowers.insert(pDestItemPower).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp: In copy constructor ‘CNormalSum::CNormalSum(const CNormalSum&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp:93:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 93 | bool tmpRes = mProducts.insert(new CNormalProduct(*pTmpProduct)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp:102:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 102 | bool tmpRes = mFractions.insert(new CNormalFraction(**it2)).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CNormalFraction* CNormalTranslation::normAndSimplifyReptdly(const CEvaluationNode*, unsigned int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:175:20: warning: unused variable ‘pFraction’ [-Wunused-variable] 175 | CNormalFraction* pFraction = dynamic_cast<CNormalFraction*>(base0); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CEvaluationNode* CNormalTranslation::newCancel(const CEvaluationNode*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:4076:34: warning: unused variable ‘pChild2’ [-Wunused-variable] 4076 | const CEvaluationNode* pChild2 = dynamic_cast<const CEvaluationNode*>(pChild1->getSibling()); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:59: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet<TYPE>&, TemplateSet<TYPE>&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2637:44: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet<TYPE>&, TemplateSet<TYPE>&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2647:44: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<T>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<T>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:27: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<T>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<T>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<T>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<T>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<T>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<T>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:60: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<T>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<T>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<T>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<T>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<T>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<T>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<T>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<T>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<T>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<T>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp: In function ‘bool contains_necessary_mass_action_elements(const CDataVector<CChemEqElement>&, const CNormalProduct*, const CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:1226:25: warning: unused variable ‘pDatamodel’ [-Wunused-variable] 1226 | const CDataModel* pDatamodel = dynamic_cast<const CDataModel*>(pModel->getObjectParent()); | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp: In function ‘normalize_variable_names(CNormalBase*, std::map<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > >&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:266:54: warning: ‘this’ pointer is null [-Wnonnull] 266 | normalize_variable_names(&pChoice->getCondition(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:46:21: note: in a call to non-static member function ‘CNormalChoice::getCondition()’ 46 | CNormalLogical& getCondition(); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:267:59: warning: ‘this’ pointer is null [-Wnonnull] 267 | normalize_variable_names(&pChoice->getTrueExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:49:22: note: in a call to non-static member function ‘CNormalChoice::getTrueExpression()’ 49 | CNormalFraction& getTrueExpression(); | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:268:60: warning: ‘this’ pointer is null [-Wnonnull] 268 | normalize_variable_names(&pChoice->getFalseExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:52:22: note: in a call to non-static member function ‘CNormalChoice::getFalseExpression()’ 52 | CNormalFraction& getFalseExpression(); | ^~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionMethod.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCrossSectionProblem&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp:95:21: warning: unused variable ‘pDataModel’ [-Wunused-variable] 95 | const CDataModel* pDataModel = o.getObjectDataModel(); | ^~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTree.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxMode.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxScore.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxMode.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CStepMatrix.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CStepMatrixColumn.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CTableauLine.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CTableauMatrix.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CZeroSet.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationParser_yacc.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationLexer_lex.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from CEvaluationParser.ypp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /raid/shoops/git/COPASI/copasi/function/CEvaluationLexer.lpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::setCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:171:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 171 | switch (pFunctionParameter->getUsage()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::addCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:217:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 217 | switch (pFunctionParameter->getUsage()) | ^ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp: In member function ‘CEvaluationNode* CDerive::deriveBranch(const CEvaluationNode*, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp:508:25: warning: unused variable ‘tmpFunction’ [-Wunused-variable] 508 | const CFunction * tmpFunction = dynamic_cast<const CFunction*>(pENCall->getCalledTree()); | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp: In member function ‘bool CEvaluationNode::operator<(const CEvaluationNode&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp:861:10: warning: enumeration value ‘UNIT’ not handled in switch [-Wswitch] 861 | switch (mainType()) | ^ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:617: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp:276: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp: In member function ‘virtual ASTNode* CEvaluationNodeConstant::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 238 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:271: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual ASTNode* CEvaluationNodeFunction::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1079 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual std::string CEvaluationNodeFunction::getMMLString(const std::vector<std::__cxx11::basic_string<char> >&, bool, const std::vector<std::vector<std::__cxx11::basic_string<char> > >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1507 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In constructor ‘CEvaluationNodeLogical::CEvaluationNodeLogical(const CEvaluationNode::SubType&, const CCopasiNode<std::__cxx11::basic_string<char> >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 53 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CIssue CEvaluationNodeLogical::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 123 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::getUnit(const CMathContainer&, const std::vector<CValidatedUnit>&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 422 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::setUnit(const CMathContainer&, const std::map<CEvaluationNode*, CValidatedUnit>&, std::map<CEvaluationNode*, CValidatedUnit>&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 458 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeLogical::fromAST(const ASTNode*, const std::vector<CEvaluationNode*>&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 553 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:492:10: warning: unused variable ‘i’ [-Wunused-variable] 492 | size_t i = 0; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:668: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp: In constructor ‘CEvaluationNodeNumber::CEvaluationNodeNumber(const CEvaluationNode::SubType&, const CCopasiNode<std::__cxx11::basic_string<char> >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 51 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp: In member function ‘virtual ASTNode* CEvaluationNodeNumber::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 240 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:275: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In constructor ‘CEvaluationNodeObject::CEvaluationNodeObject(const CEvaluationNode::SubType&, const CCopasiNode<std::__cxx11::basic_string<char> >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 61 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual CIssue CEvaluationNodeObject::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 130 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual const CCopasiNode<std::__cxx11::basic_string<char> >::Data& CEvaluationNodeObject::getData() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 332 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual std::string CEvaluationNodeObject::getInfix(const std::vector<std::__cxx11::basic_string<char> >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 358 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘void CEvaluationNodeObject::setObjectValuePtr(double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 554 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeOperator::fromAST(const ASTNode*, const std::vector<CEvaluationNode*>&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | size_t i = 0, iMax = children.size(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual ASTNode* CEvaluationNodeOperator::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 508 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1503: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual std::string CEvaluationNodeOperator::getMMLString(const std::vector<std::__cxx11::basic_string<char> >&, bool, const std::vector<std::vector<std::__cxx11::basic_string<char> > >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1515 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp: In constructor ‘CEvaluationNodeStructure::CEvaluationNodeStructure(const CEvaluationNode::SubType&, const CCopasiNode<std::__cxx11::basic_string<char> >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 40 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeUnit.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeUnit.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVector.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVector.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp:118: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeWhiteSpace.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeWhiteSpace.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/fstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/copasi.h:55, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:25: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp: In member function ‘bool CEvaluationTree::setTree(const ASTNode&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:635:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 635 | switch (TargetType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:619:20: warning: unused variable ‘pErrorNode’ [-Wunused-variable] 619 | CEvaluationNode *pErrorNode = NULL; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp: In static member function ‘static CEvaluationNode* CEvaluationTree::fromAST(const ASTNode*, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_END_OF_CORE’ not handled in switch [-Wswitch] 684 | switch (itNode->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_QUOTIENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_RATE_OF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_REM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_IMPLIES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CSYMBOL_FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_NORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_UNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BERNOULLI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BINOMIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CAUCHY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CHISQUARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_EXPONENTIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_GAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LAPLACE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LOGNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_POISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_RAYLEIGH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SELECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIXROW’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_DETERMINANT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_TRANSPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SCALAR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_OUTER_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_EXISTS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_FORALL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEDIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MODE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_SDEV’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_VARIANCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENTABOUT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_SUM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_LIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_TENDSTO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_GCD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_CONJUGATE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_ARG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_REAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_IMAGINARY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_LCM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_EQUIVALENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_APPROX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_FACTOROF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_INT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_PARTIALDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LOWLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_UPLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIVERGENCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_GRAD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_CURL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LAPLACIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_LIST’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_UNION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_INTERSECT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_IN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_PRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTPRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SETDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARTESIANPRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANT_IMAGINARYI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_INTEGERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_REALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_RATIONALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_NATURALNUMBERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_COMPLEXES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_PRIMES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EMPTYSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EULERGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INTERVAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INVERSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CONDITION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DECLARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_COMPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IDENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CODOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IMAGE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAINOFAPPLICATION’ not handled in switch [-Wswitch] [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp: In member function ‘void CExpression::initObjects()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:61:22: warning: unused variable ‘pObject’ [-Wunused-variable] 61 | CObjectInterface * pObject = | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:227: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParameters(const CFunctionParameters&, std::vector<CValue>&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:1197:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1197 | switch (role) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParametersActualValues(std::vector<CValue>&, const CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:1229:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1229 | switch (role) | ^ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp: In member function ‘size_t CFunctionParameters::findParameterByName(const std::string&, const CFunctionParameter**) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:199:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 199 | if (ppFunctionParameter != NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:195:10: warning: unused variable ‘imax’ [-Wunused-variable] 195 | size_t imax = mParameters.size(); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp:151: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CAbstractLayoutInterface.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLBase.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLColorDefinition.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLCurve.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientBase.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientStop.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientStops.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp: In member function ‘RenderGroup* CLGroup::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp:884:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 884 | int result; | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLImage.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLImageTexturizer.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp:67: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLinearGradient.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp: In member function ‘LocalRenderInformation* CLLocalRenderInformation::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp:201:11: warning: unused variable ‘result’ [-Wunused-variable] 201 | int result = pLRI->addStyle(pStyle); | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRadialGradient.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRelAbsVector.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCubicBezier.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp: In member function ‘void CLRenderInformationBase::addSBMLAttributes(RenderInformationBase*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp:439:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 439 | int result; | ^~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderPoint.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLUnresolvedReferenceException.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutEngine.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutState.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutState.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp: In static member function ‘static CLayout* SBMLDocumentLoader::createLayout(const Layout&, const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&, std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&, const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:272:10: warning: unused variable ‘count’ [-Wunused-variable] 272 | size_t count = idToKeyMap.size() + globalIdToKeyMap.size(); | ^~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp: In member function ‘int CLNAMethod::calculateCovarianceMatrixReduced()’: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:303:21: warning: unused variable ‘pJacobian’ [-Wunused-variable] 303 | const C_FLOAT64 * pJacobian = mJacobianReduced.array(); | ^~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:91:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore<double>&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore<double>&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore<double>&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompiler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore<double>&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompiler.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitExpression.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp:9: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:315:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 315 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer(CModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:417:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 417 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createSynchronizeInitialValuesSequence()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:2581:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2581 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createApplyInitialValuesSequence()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:2720:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2720 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp: In member function ‘std::string CMathDependencyGraph::getDOTNodeId(const CObjectInterface*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘Noise’ not handled in switch [-Wswitch] 651 | switch (pMathObject->getValueType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘ParticleNoise’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘TransitionTime’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNodeIterator.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp: In member function ‘void CMathDerive::initOneVar(size_t, size_t)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp:41:16: warning: unused variable ‘pVMO’ [-Wunused-variable] 41 | CMathObject* pVMO = mpContainer->getMathObject(&mpContainer->getValues()[var]); | ^~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEnum.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h: In copy constructor ‘CMathEventQueue::CAction::CAction(const CMathEventQueue::CAction&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:190:23: warning: ‘CMathEventQueue::CAction::mpPriority’ will be initialized after [-Wreorder] 190 | const C_FLOAT64 * mpPriority; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:185:26: warning: ‘CVector<double> CMathEventQueue::CAction::mValues’ [-Wreorder] 185 | CVector< C_FLOAT64 > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:85:1: warning: when initialized here [-Wreorder] 85 | CMathEventQueue::CAction::CAction(const CAction & src): | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp: In constructor ‘CMathEventQueue::CAction::CAction(CMathEvent*, CMathEventQueue*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:103:10: warning: enumeration value ‘Stop’ not handled in switch [-Wswitch] 103 | switch (pEvent->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp: In static member function ‘static CEvaluationNode* CMathEvent::CTrigger::compileLE(const CEvaluationNode*, const std::vector<CEvaluationNode*>&, const CMath::Variables<CEvaluationNode*>&, CRootProcessor*&, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 979 | switch (pTriggerNode->subType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_construct.h:61, from /usr/include/c++/13/bits/stl_tempbuf.h:61, from /usr/include/c++/13/memory:66, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:18: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp: In member function ‘virtual CIssue CMathExpression::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 285 | switch ((*it)->subType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathHistory.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::compile(CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] 643 | switch (mValueType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createIntensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1833:22: warning: unused variable ‘pNumber’ [-Wunused-variable] 1833 | CObjectInterface * pNumber = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1834:22: warning: unused variable ‘pCompartment’ [-Wunused-variable] 1834 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createExtensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1868:22: warning: variable ‘pIntensiveValue’ set but not used [-Wunused-but-set-variable] 1868 | CObjectInterface * pIntensiveValue = NULL; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1869:22: warning: variable ‘pCompartment’ set but not used [-Wunused-but-set-variable] 1869 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathUpdateSequence.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathUpdateSequence.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser_yacc.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser_lex.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp: In member function ‘void CAnnotation::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:160:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 160 | switch (type) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp: In static member function ‘static void CMMLOutput::writeDifferentialEquations(std::ostream&, CModel*, bool, bool, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:284:8: warning: variable ‘hasContents’ set but not used [-Wunused-but-set-variable] 284 | bool hasContents = false; | ^~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:61: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h: In constructor ‘CModel::CModel(CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1220:86: warning: ‘CModel::mReactionsPerSpecies’ will be initialized after [-Wreorder] 1220 | std::map < const CMetab *, std::set< std::pair< const CReaction *, C_FLOAT64 > > > mReactionsPerSpecies; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: warning: ‘CDataVectorN<CModelValue> CModel::mValues’ [-Wreorder] 1205 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:202:1: warning: when initialized here [-Wreorder] 202 | CModel::CModel(CDataContainer* pParent): | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In member function ‘bool CModel::handleUnusedMetabolites()’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:928:23: warning: variable ‘pStoiEnd’ set but not used [-Wunused-but-set-variable] 928 | C_FLOAT64 * pStoi, *pStoiEnd, *pRowEnd; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2579: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In function ‘const CObjectInterface* getDependentOrNull(const std::map<const CObjectInterface*, long unsigned int>&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 2598 | if (it->second == index) return it->first; | ~~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2618:85: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In member function ‘void CModel::updateInitialValues(std::set<const CDataObject*>&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:3439:8: warning: unused variable ‘success’ [-Wunused-variable] 3439 | bool success = compileIfNecessary(NULL); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp: In member function ‘CReactionResult CModelAnalyzer::checkReaction(const CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp:196:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 196 | switch (role) | ^ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelExpansion.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelExpansion.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In member function ‘virtual CUndoObjectInterface* CModelParameterSet::insert(const CData&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:84:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 84 | switch (CModelParameter::TypeNames.toEnum(data.getProperty(CData::OBJECT_TYPE).toString(), CModelParameter::Type::unknown)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 150 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:139:1: warning: when initialized here [-Wreorder] 139 | CModelParameterSet::CModelParameterSet(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const CModelParameterSet&, const CDataContainer*, const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 185 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelParameterSet::CModelParameterSet(const CModelParameterSet & src, | ^~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const std::string&, const CDataContainer*, const std::string&, const CFlags<CDataObject::Flag>&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelEntity::CModelEntity(const std::string & name, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const CModelEntity&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:200:1: warning: when initialized here [-Wreorder] 200 | CModelEntity::CModelEntity(const CModelEntity & src, | ^~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp: In member function ‘void CMoiety::initObjects()’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:122:17: warning: unused variable ‘pObject’ [-Wunused-variable] 122 | CDataObject * pObject = addObjectReference("Amount", mIAmount, CDataObject::ValueDbl); | ^~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CObjectLists.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CObjectLists.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp: In member function ‘std::string CReaction::getReactionScheme() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:2314:15: warning: unused variable ‘pModel’ [-Wunused-variable] 2314 | CDataModel* pModel = getObjectDataModel(); | ^~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘CUndoData CReactionInterface::createUndoData(const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:454:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 454 | switch (framework) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:508:27: warning: unused variable ‘pObject’ [-Wunused-variable] 508 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:568:27: warning: unused variable ‘pObject’ [-Wunused-variable] 568 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::vector<std::__cxx11::basic_string<char> > CReactionInterface::getUnitVector(size_t) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1295:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1295 | switch (getUsage(index)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getUnit(size_t) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1347:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1347 | switch (getUsage(index)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getEffectiveKineticLawUnit() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘Default’ not handled in switch [-Wswitch] 1683 | switch (getEffectiveKineticLawUnitType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CInternalSolver.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CLSODA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CLSODAR.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: In member function ‘int CRadau5::operator()(int*, evalF, double*, double*, double*, double*, double*, double*, int*, evalJ, int*, int*, int*, evalM, int*, int*, int*, evalO, int*, double*, int*, int*, int*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:127:17: warning: unused variable ‘io___10’ [-Wunused-variable] 127 | static cilist io___10 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:128:17: warning: unused variable ‘io___12’ [-Wunused-variable] 128 | static cilist io___12 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:129:17: warning: unused variable ‘io___15’ [-Wunused-variable] 129 | static cilist io___15 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:130:17: warning: unused variable ‘io___17’ [-Wunused-variable] 130 | static cilist io___17 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:131:17: warning: unused variable ‘io___19’ [-Wunused-variable] 131 | static cilist io___19 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:132:17: warning: unused variable ‘io___24’ [-Wunused-variable] 132 | static cilist io___24 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:133:17: warning: unused variable ‘io___29’ [-Wunused-variable] 133 | static cilist io___29 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:134:17: warning: unused variable ‘io___31’ [-Wunused-variable] 134 | static cilist io___31 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:135:17: warning: unused variable ‘io___33’ [-Wunused-variable] 135 | static cilist io___33 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:136:17: warning: unused variable ‘io___36’ [-Wunused-variable] 136 | static cilist io___36 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:137:17: warning: unused variable ‘io___39’ [-Wunused-variable] 137 | static cilist io___39 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:138:17: warning: unused variable ‘io___43’ [-Wunused-variable] 138 | static cilist io___43 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:139:17: warning: unused variable ‘io___50’ [-Wunused-variable] 139 | static cilist io___50 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:140:17: warning: unused variable ‘io___52’ [-Wunused-variable] 140 | static cilist io___52 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:141:17: warning: unused variable ‘io___68’ [-Wunused-variable] 141 | static cilist io___68 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:142:17: warning: unused variable ‘io___72’ [-Wunused-variable] 142 | static cilist io___72 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: In function ‘int radcor_(int*, CRadau5::evalF, double*, double*, double*, double*, double*, double*, double*, int*, CRadau5::evalJ, int*, int*, int*, CRadau5::evalM, int*, int*, CRadau5::evalO, int*, int*, int*, double*, double*, double*, double*, double*, double*, int*, int*, long int*, int*, int*, int*, long int*, double*, double*, int*, int*, int*, long int*, long int*, int*, int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, int*, int*, int*, double*, int*, int*, int*, int*, int*, int*, int*, double*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1071:20: warning: variable ‘index1’ set but not used [-Wunused-but-set-variable] 1071 | static C_LOGICAL index1, index2, index3, caljac; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1107:17: warning: unused variable ‘io___176’ [-Wunused-variable] 1107 | static cilist io___176 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1108:17: warning: unused variable ‘io___177’ [-Wunused-variable] 1108 | static cilist io___177 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1109:17: warning: unused variable ‘io___178’ [-Wunused-variable] 1109 | static cilist io___178 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1110:17: warning: unused variable ‘io___179’ [-Wunused-variable] 1110 | static cilist io___179 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1111:17: warning: unused variable ‘io___180’ [-Wunused-variable] 1111 | static cilist io___180 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1112:17: warning: unused variable ‘io___181’ [-Wunused-variable] 1112 | static cilist io___181 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1113:17: warning: unused variable ‘io___182’ [-Wunused-variable] 1113 | static cilist io___182 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:53:14: warning: ‘c__3’ defined but not used [-Wunused-variable] 53 | static C_INT c__3 = 3; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:52:14: warning: ‘c__5’ defined but not used [-Wunused-variable] 52 | static C_INT c__5 = 5; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:51:14: warning: ‘c__1’ defined but not used [-Wunused-variable] 51 | static C_INT c__1 = 1; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:50:14: warning: ‘c__9’ defined but not used [-Wunused-variable] 50 | static C_INT c__9 = 9; | ^~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/Cxerrwd.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/common.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dbnorm.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dc_decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dcfode.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dewset.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dfnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dintdy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dmnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dprja.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/drcheck.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dsolsy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dstoda.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp: In destructor ‘CRandomContext::~CRandomContext()’: /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp:17:1: warning: label ‘Base’ defined but not used [-Wunused-label] 17 | Base: master() = NULL; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp: In member function ‘void CRandomContext::init(CRandom::Type, unsigned int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp:28:1: warning: label ‘Base’ defined but not used [-Wunused-label] 28 | Base: master() = NULL; | ^~~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9831:3: warning: "/*" within comment [-Wcomment] 9831 | /* ret_val = i1mach_(&mdperm[*k - 1]); */ | In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘doublereal d1mach_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:391:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 391 | fprintf(stderr, "invalid argument: d1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int da7sst_(integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:1090:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1090 | if (v[6] > 0. && v[6] <= emax || v[6] == 0. && v[7] == 0.) | ~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int dg7itb_(doublereal*, doublereal*, doublereal*, integer*, integer*, integer*, integer*, integer*, doublereal*, doublereal*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:2092:41: warning: variable ‘rstrst’ set but not used [-Wunused-but-set-variable] 2092 | static integer td1, tg1, lstgst, pp1, rstrst; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int dparck_(integer*, doublereal*, integer*, integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6647:15: warning: unused variable ‘vn’ [-Wunused-variable] 6647 | static char vn[4 * 2 * 34] = ""; | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6663:15: warning: unused variable ‘varnm’ [-Wunused-variable] 6663 | static char varnm[1 * 2] = ""; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6664:15: warning: unused variable ‘sh’ [-Wunused-variable] 6664 | static char sh[1 * 2] = ""; | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘integer i1mach_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9778:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 9778 | fprintf(stderr, "invalid argument: i1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘integer i7mdcn_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9833:43: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses] 9833 | ret_val = i1mach_(&mdperm[(0 + (0 + (*k - 1 << 2))) / 4]); | ~~~^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp: In member function ‘void COptItem::updatePrerequisites(const std::vector<COptItem*>&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp:503:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 503 | std::vector< COptItem * >::const_iterator it = influencingIntervals.begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp:504:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 504 | std::vector< COptItem * >::const_iterator end = influencingIntervals.end(); | ^~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLog.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLogEntry.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLogItem.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp: In member function ‘virtual bool COptMethodLevenbergMarquardt::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp:132:28: warning: variable ‘nrhs’ set but not used [-Wunused-but-set-variable] 132 | C_INT dim, starts, info, nrhs; | ^~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:107: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 107 | #pragma omp critical | /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:120: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 120 | #pragma omp critical | /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:201: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 201 | #pragma omp critical | /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:342: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 342 | #pragma omp critical | /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:626: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 626 | #pragma omp parallel for schedule(runtime) | /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:646: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 646 | #pragma omp parallel for schedule(runtime) | In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp: In member function ‘bool COptMethodPS::reachedStdDeviation()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:482:15: warning: unused variable ‘pEnd’ [-Wunused-variable] 482 | C_FLOAT64 * pEnd = pValue + mPopulationSize; | ^~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp: In member function ‘virtual bool COptMethodPraxis::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:99:13: warning: variable ‘tmp’ set but not used [-Wunused-but-set-variable] 99 | C_FLOAT64 tmp = 0.0; | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:100:13: warning: variable ‘machep’ set but not used [-Wunused-but-set-variable] 100 | C_FLOAT64 machep, stepmx, d1, d2; | ^~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp: In member function ‘bool COptMethodSS::combination()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:820:13: warning: variable ‘la’ set but not used [-Wunused-but-set-variable] 820 | C_FLOAT64 la; // for orders of magnitude | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:827:22: warning: variable ‘xprval’ set but not used [-Wunused-but-set-variable] 827 | C_FLOAT64 xnewval, xprval; // to hold temp value of "parent" in go-beyond strategy | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp: In member function ‘virtual bool COptMethodStatistics::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp:93:8: warning: variable ‘Continue’ set but not used [-Wunused-but-set-variable] 93 | bool Continue = true; | ^~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp: In member function ‘int COptMethodTruncatedNewton::sFun(int*, double*, double*, double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp:328:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 328 | for (size_t i = 0; i < mVariableSize; i++, g++) | ~~^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:662:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 662 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:657:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 657 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:84:1: warning: when initialized here [-Wreorder] 84 | COptProblem::COptProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const COptProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:662:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 662 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:657:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 657 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:129:1: warning: when initialized here [-Wreorder] 129 | COptProblem::COptProblem(const COptProblem & src, | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘virtual void COptProblem::calculateValue()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:184:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 184 | std::vector< COptItem * >::const_iterator it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:185:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 185 | std::vector< COptItem * >::const_iterator end = mpOptItems->end(); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘double COptProblem::evalMinimizeIntervals(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:826:23: warning: unused variable ‘SQRT_EPSILON’ [-Wunused-variable] 826 | static const double SQRT_EPSILON = sqrt(std::numeric_limits< double >::epsilon()); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘virtual bool COptProblem::setSolution(const double&, const CVector<double>&, const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:1014:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 1014 | if (variables.size() != 0) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp: In member function ‘double CPraxis::operator()(double, double, int, int, double*, FPraxis*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:1097:11: warning: variable ‘seed’ set but not used [-Wunused-but-set-variable] 1097 | C_INT32 seed; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp: In member function ‘CPraxis::minfit(int, double, double*, double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:337:11: warning: ‘f’ may be used uninitialized [-Wmaybe-uninitialized] 337 | if (0.0 <= f) | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:236:13: note: ‘f’ was declared here 236 | C_FLOAT64 f; | ^ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRandomSearch.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRandomSearch.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.h:53, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/FminBrent.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqn_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:387:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 387 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:391:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 391 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:401:27: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 401 | C_FLOAT64 gnorm, ftest, fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqnbc_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, double*, double*, int*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:761:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 761 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:766:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 766 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:777:13: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 777 | C_FLOAT64 fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In function ‘int initp3_(double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:2398:13: warning: variable ‘cond’ set but not used [-Wunused-but-set-variable] 2398 | C_FLOAT64 cond; | ^~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentFileInfo.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp: In member function ‘double CExperiment::getErrorMeanSD(const CObjectInterface*, const double&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:1673:20: warning: unused variable ‘pScale’ [-Wunused-variable] 1673 | const C_FLOAT64 *pScale = mScale.array() + it->second; | ^~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataTimer.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:342:85: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual bool CFitProblem::calculate()’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1046:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1046 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1094:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1094 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1195:34: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 1195 | auto it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual void CFitProblem::updateContainer(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1333:17: warning: variable ‘pExp’ set but not used [-Wunused-but-set-variable] 1333 | CExperiment * pExp = NULL; | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotColors.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/CPermutation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/CRandom.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/Cmt19937.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/Cr250.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CKeyFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h: In constructor ‘CDataHandler::CDataHandler(bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector<CObjectInterface*> CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector<CObjectInterface*> CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h: In copy constructor ‘CDataHandler::CDataHandler(const CDataHandler&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector<CObjectInterface*> CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector<CObjectInterface*> CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp: In member function ‘virtual void CDataHandler::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:171:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 171 | switch (activity) | ^ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:723:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp: In member function ‘virtual void CReport::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp:136:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 136 | switch (activity) | ^ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportBody.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h: In constructor ‘CReportDefinition::CReportDefinition(const CReportDefinition&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h:68:20: warning: ‘CReportDefinition::mPrecision’ will be initialized after [-Wreorder] 68 | unsigned C_INT32 mPrecision; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h:60:38: warning: ‘std::vector<CRegisteredCommonName> CReportDefinition::mHeaderVector’ [-Wreorder] 60 | std::vector<CRegisteredCommonName> mHeaderVector; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp:143:1: warning: when initialized here [-Wreorder] 143 | CReportDefinition::CReportDefinition(const CReportDefinition & src, | ^~~~~~~~~~~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static REACTION_TYPE CCellDesignerImporter::reactionTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:4866:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4866 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_LINK_TYPE CCellDesignerImporter::modificationLinkTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:4954:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4954 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_TYPE CCellDesignerImporter::modificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:5022:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 5022 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static SPECIES_MODIFICATION_TYPE CCellDesignerImporter::speciesModificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:10901:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 10901 | bool status; | ^~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:80: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:25: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:97: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In function ‘void addSymbolComponentToUnitDefinition(UnitDefinition*, CUnit::SymbolComponent&, const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3109:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3109 | if (unitKind != C_INVALID_INDEX && use_d_prefix) /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3114:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3114 | if (unitKind == C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In member function ‘void CSBMLExporter::addInitialAssignmentsToModel(const CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3397:11: warning: unused variable ‘result’ [-Wunused-variable] 3397 | int result = model->addParameter(param); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In member function ‘bool CSBMLExporter::createSBMLDocument(CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3741:15: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 3741 | int result; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In static member function ‘static XMLNode* CSBMLExporter::createSBMLNotes(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:8125:31: warning: unused variable ‘tmp’ [-Wunused-variable] 8125 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", prefix); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:8191:27: warning: unused variable ‘tmp’ [-Wunused-variable] 8191 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", ""); | ^~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/ConverterASTNode.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLIncompatibility.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLReference.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:72: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:79: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:84: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:34: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:100: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:101: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::replaceAmountReferences(ConverterASTNode*, Model*, double, std::map<const CDataObject*, SBase*>&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:3620:43: warning: variable ‘pSpecies’ set but not used [-Wunused-but-set-variable] 3620 | ASTNode *pAvogadro = NULL, *pSpecies = NULL; | ^~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::applyConversionFactors()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:7861:25: warning: variable ‘pE’ set but not used [-Wunused-but-set-variable] 7861 | const CChemEqElement* pE = NULL; | ^~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::importUnitsFromSBMLDocument(Model*, CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:172:24: warning: unused variable ‘pUDef’ [-Wunused-variable] 172 | UnitDefinition * pUDef = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::checkElementUnits(const Model*, CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1042:8: warning: variable ‘inconsistentDimensionlessUnits’ set but not used [-Wunused-but-set-variable] 1042 | bool inconsistentDimensionlessUnits = false; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1043:8: warning: unused variable ‘defaultVolumeUsed’ [-Wunused-variable] 1043 | bool defaultVolumeUsed = false; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1044:8: warning: unused variable ‘defaultAreaUsed’ [-Wunused-variable] 1044 | bool defaultAreaUsed = false; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1045:8: warning: unused variable ‘defaultLengthUsed’ [-Wunused-variable] 1045 | bool defaultLengthUsed = false; | ^~~~~~~~~~~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUtils.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/StdException.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/CSBMLunit.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/CSBMLunitInterface.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMML.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMML.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMMLUnits.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp: In member function ‘bool CScanMethod::loop(size_t)’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:574:10: warning: unused variable ‘failCounter’ [-Wunused-variable] 574 | size_t failCounter = 0; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp: In member function ‘CScanItemRandom::step()’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:388:22: warning: ‘Value’ may be used uninitialized [-Wmaybe-uninitialized] 388 | *mpObjectValue = Value; | ~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:339:13: note: ‘Value’ was declared here 339 | C_FLOAT64 Value; | ^~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp:92:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp: In member function ‘bool CScanTask::processCallback()’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 201 | if (success && !mOutputInSubtask) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:261:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:492:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp: In member function ‘bool CSensMethod::initialize(CSensProblem*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:484:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 484 | switch (mpProblem->getSubTaskType()) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:322:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector<CObjectLists::ListType> CSensProblem::getPossibleTargetFunctions(SubTaskType)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:504:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 504 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector<CObjectLists::ListType> CSensProblem::getPossibleVariables(SubTaskType)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:572:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 572 | switch (type) | ^ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CEigen.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp: In member function ‘virtual bool CSensTask::process(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:106:17: warning: unused variable ‘pProblem’ [-Wunused-variable] 106 | CSensProblem* pProblem = | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘void CMCAMethod::calculateUnscaledElasticities(double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:226:32: warning: unused variable ‘TransientDependencies’ [-Wunused-variable] 226 | const CMathDependencyGraph & TransientDependencies = mpContainer->getTransientDependencies(); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:229:17: warning: unused variable ‘pParticleFluxObjectEnd’ [-Wunused-variable] 229 | CMathObject * pParticleFluxObjectEnd = pParticleFluxObject + numReacs; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:231:17: warning: unused variable ‘pSpeciesObjectEnd’ [-Wunused-variable] 231 | CMathObject * pSpeciesObjectEnd = pSpeciesObjectStart + numMetabs; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::calculateUnscaledConcentrationCC()’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:330:9: warning: unused variable ‘N’ [-Wunused-variable] 330 | C_INT N = (C_INT) aux2.numRows(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::scaleMCA(const bool&, double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:394:10: warning: unused variable ‘numReacs’ [-Wunused-variable] 394 | size_t numReacs = mpContainer->getParticleFluxes().size(); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:103:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:235: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:54:1: warning: when initialized here [-Wreorder] 54 | CNewtonMethod::CNewtonMethod(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CNewtonMethod&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CNewtonMethod::CNewtonMethod(const CNewtonMethod & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp: In member function ‘std::string CNewtonMethod::targetValueToString() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 685 | switch (mTargetCriterion) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp: In member function ‘virtual bool CNewtonMethod::initialize(const CSteadyStateProblem*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:858:23: warning: variable ‘pTrajectoryMethod’ set but not used [-Wunused-but-set-variable] 858 | CTrajectoryMethod * pTrajectoryMethod = NULL; | ^~~~~~~~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp: In member function ‘virtual void CTimeSensLsodaMethod::start()’: /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:565:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 565 | for (i = mSystemSize + 1; i < mData.dim; ++i) | ~~^~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:153:84: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:65: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp: In member function ‘void CHybridMethod::calculateDerivative(CVectorCore<double>&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:330:11: warning: unused variable ‘bal’ [-Wunused-variable] 330 | C_INT32 bal = 0; | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:65: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CHybridMethodODE45::CHybridMethodODE45(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:141:1: warning: when initialized here [-Wreorder] 141 | CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45 & src, | ^~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp: In member function ‘virtual void CHybridNextReactionRKMethod::integrateDeterministicPart(double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:93:22: warning: unused variable ‘react’ [-Wunused-variable] 93 | CHybridStochFlag * react = NULL; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:28:1: warning: when initialized here [-Wreorder] 28 | CLsodaMethod2::CLsodaMethod2(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:61:1: warning: when initialized here [-Wreorder] 61 | CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2 & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp: In member function ‘virtual CTrajectoryMethod::Status CLsodaMethod2::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:150:13: warning: unused variable ‘StartTime’ [-Wunused-variable] 150 | C_FLOAT64 StartTime = mTime; | ^~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRootFinder.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::doOneStep()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:431:10: warning: unused variable ‘s’ [-Wunused-variable] 431 | size_t s = mStage - 1; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::setInitialStepSize()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:710:13: warning: unused variable ‘absT’ [-Wunused-variable] 710 | C_FLOAT64 absT = fabs(mTLeft); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::checkRoots()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:802:15: warning: unused variable ‘pLeftRoots’ [-Wunused-variable] 802 | C_FLOAT64 * pLeftRoots = mRootValuesLeft; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:805:15: warning: unused variable ‘pRightRoots’ [-Wunused-variable] 805 | C_FLOAT64 * pRightRoots = mRootValueRight; | ^~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp: In member function ‘bool CTauLeapMethod::updateSystem()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:365:21: warning: unused variable ‘pKEnd’ [-Wunused-variable] 365 | const C_FLOAT64 * pKEnd = pK + mNumReactions; | ^~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp: In member function ‘virtual bool CTimeSeries::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:181:14: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 181 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:44:1: warning: when initialized here [-Wreorder] 44 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:70:1: warning: when initialized here [-Wreorder] 70 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA & src, | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:54, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:48:1: warning: when initialized here [-Wreorder] 48 | CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:71:1: warning: when initialized here [-Wreorder] 71 | CTrajectoryProblem::CTrajectoryProblem(const CDataContainer * pParent): | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:94:1: warning: when initialized here [-Wreorder] 94 | CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem & src, | ^~~~~~~~~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:193:84: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/locale:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:25: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:60: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:611:104: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:25: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:73:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:25: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:71:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:25: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp: In member function ‘int CCSPMethod::isBlockDiagonal(int, int, const CMatrix<double>&, const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:15: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:21: warning: variable ‘jmax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:27: warning: variable ‘imaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:34: warning: variable ‘jmaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘virtual void CILDMMethod::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:108:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 108 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:223:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 223 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘void CILDMMethod::deuflhard(int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:886:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 886 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:1029:13: warning: variable ‘max1’ set but not used [-Wunused-but-set-variable] 1029 | C_FLOAT64 max1; | ^~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘virtual void CILDMModifiedMethod::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:117:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 117 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:179:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 179 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:224:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 224 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::deuflhard_metab(int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:508:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 508 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_new(int*, int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:620:25: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 620 | C_INT nrhs, ok, fast, flag_newton; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_for_timestep(int, double&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:848:27: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 848 | C_INT i, iter, itermax, flag_newton; | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_mod_space(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:407:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 407 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:465:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 465 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space_thomas(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:523:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 523 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::sylvester(int, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:1645:9: warning: variable ‘flag_sylvester’ set but not used [-Wunused-but-set-variable] 1645 | C_INT flag_sylvester; | ^~~~~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CData.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator==(const CDataValue&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:322:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 322 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator!=(const CDataValue&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:362:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 362 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::allocateData(const Type&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:416:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 416 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::deleteData()’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:466:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 466 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::assignData(const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:510:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 510 | switch (rhs.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:626:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 626 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In function ‘std::istream& operator>>(std::istream&, CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:707:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 707 | switch (i.mType) | ^ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoObjectInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘void CUndoData::CChangeSet::add(const CUndoData::ChangeInfo&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:67:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 67 | switch (Info.type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CUndoObjectInterface*, const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:207:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 207 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CData&, const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:252:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 252 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:320:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 320 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:354:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 354 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::isSetProperty(const std::string&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 422 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::apply(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:555:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 555 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::undo(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:577:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 577 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectDisplayName() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:649:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 649 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:666:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 666 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectType() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:696:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 696 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::operator<(const CUndoData&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:715:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 715 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:753:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 753 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘const CData& CUndoData::getData(const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:977:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 977 | switch (mType) | ^ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoStack.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser_yacc.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser_lex.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CBaseUnit.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CBrent.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiException.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp: In member function ‘virtual void CCopasiParameterGroup::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp:236:22: warning: unused variable ‘pParameter’ [-Wunused-variable] 236 | CCopasiParameter * pParameter; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual CData CCopasiParameter::toData() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:105:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 105 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual void CCopasiParameter::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:185:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 185 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCopasiParameter&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:419:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 419 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::createValue()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:534:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 534 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::assignValidValues(const void*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:596:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 596 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValue(const Type&, void*&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:661:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 661 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::assignValue(const Type&, void*&, const void*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:713:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 713 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValidValues(const Type&, void*&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:807:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 807 | switch (type) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h: In constructor ‘CCopasiTask::CCopasiTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:522:24: warning: ‘CCopasiTask::mInitialState’ will be initialized after [-Wreorder] 522 | CVector< C_FLOAT64 > mInitialState; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:516:20: warning: ‘CMathContainer* CCopasiTask::mpContainer’ [-Wreorder] 516 | CMathContainer * mpContainer; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:232:1: warning: when initialized here [-Wreorder] 232 | CCopasiTask::CCopasiTask() | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp: In member function ‘virtual void CCopasiTask::separate(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:654:12: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 654 | switch (activity) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTaskStatus.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CDependencyGraph.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CDirEntry.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:46: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp: In static member function ‘static std::string CExpressionGenerator::generate(Operation, const std::vector<const CDataObject*>&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<const CDataObject*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for (int i = 1; i < objects.size(); ++i) | ~~^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CFlags.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCore.h:83, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.h:13, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h: In instantiation of ‘std::vector<Type> CEnumAnnotation<Type, Enum>::annotations() const [with Type = std::__cxx11::basic_string<char>; Enum = CExpressionGenerator::Operation]’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:71:36: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h:114:42: warning: loop variable ‘a’ of type ‘const std::pair<std::__cxx11::basic_string<char>, CExpressionGenerator::Operation>&’ binds to a temporary constructed from type ‘const std::pair<const std::__cxx11::basic_string<char>, CExpressionGenerator::Operation>’ [-Wrange-loop-construct] 114 | for (const std::pair< Type, Enum > & a : mMap) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h:114:42: note: use non-reference type ‘const std::pair<std::__cxx11::basic_string<char>, CExpressionGenerator::Operation>’ to make the copy explicit or ‘const std::pair<const std::__cxx11::basic_string<char>, CExpressionGenerator::Operation>&’ to prevent copying [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CIndexedPriorityQueue.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLeastSquareSolution.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore<double>&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::create(const CTaskEnum::Task&, const CTaskEnum::Method&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 80 | switch (methodType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::copy(const CCopasiMethod*, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 288 | switch (pSrc->getSubType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:193:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp: In static member function ‘static FittingItem* ResultParser::parseItem(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:481:16: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 481 | if (firstLeq == -1) | ~~~~~~~~~^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:488:14: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 488 | if (square == -1) | ~~~~~~~^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CReadConfig.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp:31: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTableCell.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskEnum.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitComponent.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp: In member function ‘virtual bool CUnitDefinitionDB::add(const CUnitDefinition&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp:43:21: warning: variable ‘pCopy’ set but not used [-Wunused-but-set-variable] 43 | CUnitDefinition * pCopy = NULL; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h: In constructor ‘CUnitParserBase::CUnitParserBase()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h:81:20: warning: ‘CUnitParserBase::mPosition’ will be initialized after [-Wreorder] 81 | unsigned C_INT32 mPosition; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h:80:10: warning: ‘CUnit* CUnitParserBase::mpUnit’ [-Wreorder] 80 | CUnit *mpUnit; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp:20:1: warning: when initialized here [-Wreorder] 20 | CUnitParserBase::CUnitParserBase(): | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidatedUnit.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidatedUnit.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CVersion.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::add(const CIssue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp:277:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 277 | switch (issue.getSeverity()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::remove(const CIssue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp:316:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 316 | switch (issue.getSeverity()) | ^ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CluX.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/Cmd5.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CopasiTime.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/dgemm.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp: In function ‘ISODateTime[abi:cxx11](tm*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:24: warning: ‘%.02d’ directive writing between 2 and 11 bytes into a region of size between 8 and 18 [-Wformat-overflow=] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:20: note: directive argument in the range [-2147483647, 2147483647] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:964, from /usr/include/c++/13/cstdio:42, from /usr/include/c++/13/ext/string_conversions.h:45, from /usr/include/c++/13/bits/basic_string.h:4109, from /usr/include/c++/13/string:54, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:28: In function ‘sprintf’, inlined from ‘ISODateTime[abi:cxx11](tm*)’ at /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:14: /usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 17 and 72 bytes into a destination of size 20 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:55: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:67: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:69: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:304:7: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp: In member function ‘bool CCopasiXML::saveModel()’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:1042:28: warning: unused variable ‘pDataModel’ [-Wunused-variable] 1042 | CDataModel * pDataModel = Assignments.getObjectDataModel(); | ^~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CExpat.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CFixLocalReactionParameters.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CFixLocalReactionParameters.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/BoundingBoxHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:79:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:181:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp: In member function ‘CXMLHandler* CXMLHandlerFactory::createHandler(const CXMLHandler::Type&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘AFTER’ not handled in switch [-Wswitch] 137 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint1’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Body’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘CurveSegment’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘DelayExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘End’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Expression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Footer’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Header’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘InitialExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘NoiseExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Position’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘PriorityExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Problem’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Start’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Text’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘TriggerExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Unit’ not handled in switch [-Wswitch] [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CallParameterHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ChannelSpecHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CharacterDataHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ColorDefinitionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ColorDefinitionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CommentHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CubicBezierHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CurveHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/DimensionsHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EllipseHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EllipseHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:96:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GUIHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GradientStopHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GroupHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GradientStopHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GroupHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ImageHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/InitialStateHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineEndingHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineSegmentHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineEndingHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LinearGradientHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LinearGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfCurveSegmentsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfLayoutsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MathMLHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MethodHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MiriamAnnotationHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterGroupHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ObjectHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterGroupHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterTextHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotItemHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotSpecificationHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PointHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotSpecificationHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PolygonHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PolygonHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RadialGradientHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RadialGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RectangleHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RectangleHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveElementHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderInformationHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderTextHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderTextHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderInformationHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportDefinitionHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportSectionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportTargetHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SliderHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StateTemplateHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StateTemplateVariableHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StyleHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StyleHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TableHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:66:52: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UNKNOWNHandler.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnsupportedAnnotationHandler.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:410:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createScanTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:450:8: warning: unused variable ‘result’ [-Wunused-variable] 450 | bool result = exportNthScanItem(pProblem, numItems - 1, task); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createSteadyStateTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:638:23: warning: unused variable ‘tProblem’ [-Wunused-variable] 638 | CTrajectoryProblem* tProblem = static_cast<CTrajectoryProblem*>(pTask->getProblem()); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In static member function ‘static std::string CSEDMLExporter::getParameterValueAsString(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:760:49: warning: second operand of conditional expression has no effect [-Wunused-value] 760 | str << pParameter->getValue< bool >() ? "true" : "false"; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:760:58: warning: third operand of conditional expression has no effect [-Wunused-value] 760 | str << pParameter->getValue< bool >() ? "true" : "false"; | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:195:18: warning: ‘virtual CIssue CEvaluationTree::compile()’ was hidden [-Woverloaded-virtual=] 195 | virtual CIssue compile(); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:96:18: note: by ‘virtual CIssue CExpression::compile(CObjectInterface::ContainerList)’ 96 | virtual CIssue compile(CObjectInterface::ContainerList listOfContainer = | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:25: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:68: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:168:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp: In member function ‘void SEDMLImporter::importOutputs()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:465:18: warning: unused variable ‘logX’ [-Wunused-variable] 465 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:466:18: warning: unused variable ‘logY’ [-Wunused-variable] 466 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:499:18: warning: unused variable ‘logX’ [-Wunused-variable] 499 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:500:18: warning: unused variable ‘logY’ [-Wunused-variable] 500 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:424:46: warning: unused variable ‘copasiMap’ [-Wunused-variable] 424 | std::map< const CDataObject *, SBase * > & copasiMap = pModel->getObjectDataModel()->getCopasi2SBMLMap(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:426:29: warning: unused variable ‘pReports’ [-Wunused-variable] 426 | CReportDefinitionVector * pReports = mpDataModel->getReportDefinitionList(); | ^~~~~~~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static const CDataObject* SEDMLUtils::resolveVariable(CModel*, const SedVariable*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:337:25: warning: unused variable ‘pReaction’ [-Wunused-variable] 337 | const CReaction * pReaction = dynamic_cast< const CReaction * >(obj); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static int SEDMLUtils::getAlphaFromRgba(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:665:7: warning: unused variable ‘offset’ [-Wunused-variable] 665 | int offset = rgba[0] == '#' ? 1 : 0; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h: In constructor ‘VariableInfo::VariableInfo(const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:74:23: warning: ‘VariableInfo::mpObject’ will be initialized after [-Wreorder] 74 | const CDataObject * mpObject; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:72:8: warning: ‘bool VariableInfo::mIsValid’ [-Wreorder] 72 | bool mIsValid; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:808:1: warning: when initialized here [-Wreorder] 808 | VariableInfo::VariableInfo(const CDataObject * pObject) | ^~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Built target libCOPASISE-core /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-static.dir/build.make copasi/CMakeFiles/libCOPASISE-static.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASISE-static.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-static.dir/build.make copasi/CMakeFiles/libCOPASISE-static.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] 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"CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o" "CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o" "CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o" /usr/bin/ranlib libCOPASISE.a gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Built target libCOPASISE-static /usr/bin/gmake -f copasi/CMakeFiles/libCOPASIUI.dir/build.make copasi/CMakeFiles/libCOPASIUI.dir/depend /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_lib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Swig Python source cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/../swig/ -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/../../ -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python -I/builddir/build/BUILD/COPASI-Build-284 -c++ -python -DLIBSBML_CPP_NAMESPACE_USE= -DLIBSBML_CPP_NAMESPACE_BEGIN= -DLIBSBML_CPP_NAMESPACE_END= -DLIBSEDML_CPP_NAMESPACE_USE= -DLIBSEDML_CPP_NAMESPACE_BEGIN= -DLIBSEDML_CPP_NAMESPACE_END= -DLIBSEDML_CPP_NAMESPACE_QUALIFIER= -DLIBCOMBINE_CPP_NAMESPACE_USE= -DLIBCOMBINE_CPP_NAMESPACE_BEGIN= -DLIBCOMBINE_CPP_NAMESPACE_END= -DLIBCOMBINE_CPP_NAMESPACE_QUALIFIER= -features autodoc,1 -o /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/python.i gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Generating wizard/ui_wizard.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/ui_wizard.h /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/wizard.ui [ 36%] Generating MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQCreatorDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQCreatorDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQMiriamWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQMiriamWidget.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQModifiedDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQModifiedDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeViewItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeViewItem.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating MIRIAMUI/moc_CQReferenceDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQReferenceDM.cpp_parameters [ 37%] Generating MIRIAMUI/ui_CQMiriamWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/ui_CQMiriamWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.ui [ 37%] Generating MIRIAMUI/ui_CQRDFTreeView.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/ui_CQRDFTreeView.h /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.ui [ 37%] Generating UI/moc_AboutDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_AboutDialog.cpp_parameters [ 37%] Generating UI/moc_CColorScale.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CColorScale.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CColorScale.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating UI/moc_CCopasiPlot2YSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlot2YSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiPlotSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlotSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionWidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CProgressBar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CProgressBar.cpp_parameters [ 38%] Generating UI/moc_CQAnalyticsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQAnalyticsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidgetDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidgetDM.cpp_parameters [ 38%] Generating UI/moc_CQBaseDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBaseTreeDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseTreeDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPane.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPane.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPaneDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPaneDM.cpp_parameters [ 38%] Generating UI/moc_CQCheckModelWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCheckModelWindow.cpp_parameters [ 38%] Generating UI/moc_CQComboDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQComboDelegate.cpp_parameters [ 38%] Generating UI/moc_CQCompartment.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentCopyOptions.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentCopyOptions.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentDM.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentsWidget.cpp_parameters [ 39%] Generating UI/moc_CQCopasiApplication.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCopasiApplication.cpp_parameters [ 39%] Generating UI/moc_CQCrossSectionTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCrossSectionTaskWidget.cpp_parameters [ 39%] Generating UI/moc_CQDateTimeEditDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDateTimeEditDelegate.cpp_parameters [ 39%] Generating UI/moc_CQDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependenciesWidget.cpp_parameters [ 39%] Generating UI/moc_CQDependencyDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyDialog.cpp_parameters [ 39%] Generating UI/moc_CQDependencyWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyWidget.cpp_parameters [ 39%] Generating UI/moc_CQDifferentialEquations.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDifferentialEquations.cpp_parameters [ 39%] Generating UI/moc_CQEFMListWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMListWidget.cpp_parameters [ 39%] Generating UI/moc_CQEFMNetReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMNetReactionDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMReactionDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMResultWidget.cpp_parameters [ 39%] Generating UI/moc_CQEFMSpeciesDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMSpeciesDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMWidget.cpp_parameters [ 39%] Generating UI/moc_CQEventDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventDM.cpp_parameters [ 40%] Generating UI/moc_CQEventWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp_parameters [ 40%] Generating UI/moc_CQEventsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventsWidget.cpp_parameters [ 40%] Generating UI/moc_CQExpandModelData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpandModelData.cpp_parameters [ 40%] Generating UI/moc_CQExperimentData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentData.cpp_parameters [ 40%] Generating UI/moc_CQExperimentSelection.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentSelection.cpp_parameters [ 40%] Generating UI/moc_CQExpressionMmlStackedWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp_parameters [ 40%] Generating UI/moc_CQExpressionWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp_parameters [ 40%] Generating UI/moc_CQFittingItemWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingItemWidget.cpp_parameters [ 40%] Generating UI/moc_CQFittingResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResult.cpp_parameters [ 40%] Generating UI/moc_CQFittingResultTab1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResultTab1.cpp_parameters [ 40%] Generating UI/moc_CQFittingWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingWidget.cpp_parameters [ 40%] Generating UI/moc_CQFluxModeDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFluxModeDM.cpp_parameters [ 40%] Generating UI/moc_CQFunctionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionDM.cpp_parameters [ 41%] Generating UI/moc_CQFunctionsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionsWidget.cpp_parameters [ 41%] Generating UI/moc_CQGlobalQuantitiesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantitiesWidget.cpp_parameters [ 41%] Generating UI/moc_CQGlobalQuantityDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantityDM.cpp_parameters [ 41%] Generating UI/moc_CQLNAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLNAWidget.cpp_parameters [ 41%] Generating UI/moc_CQLayoutsDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsDM.cpp_parameters [ 41%] Generating UI/moc_CQLayoutsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsWidget.cpp_parameters [ 41%] Generating UI/moc_CQLyapResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapResultWidget.cpp_parameters [ 41%] Generating UI/moc_CQLyapWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapWidget.cpp_parameters [ 41%] Generating UI/moc_CQMCAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMCAWidget.cpp_parameters [ 41%] Generating UI/moc_CQMathMatrixWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMathMatrixWidget.cpp_parameters [ 41%] Generating UI/moc_CQMatrixDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMatrixDialog.cpp_parameters [ 41%] Generating UI/moc_CQMergingData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMergingData.cpp_parameters [ 41%] Generating UI/moc_CQMessageBox.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMessageBox.cpp_parameters [ 41%] Generating UI/moc_CQMmlScrollView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMmlScrollView.cpp_parameters [ 42%] Generating UI/moc_CQModelValue.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp_parameters [ 42%] Generating UI/moc_CQModelWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelWidget.cpp_parameters [ 42%] Generating UI/moc_CQMoietiesTaskResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskResult.cpp_parameters [ 42%] Generating UI/moc_CQMoietiesTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskWidget.cpp_parameters [ 42%] Generating UI/moc_CQMultipleSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMultipleSelectionDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:337: Warning 383: operator++ ignored [ 42%] Generating UI/moc_CQNameSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNameSelectionDialog.cpp_parameters [ 42%] Generating UI/moc_CQNotes.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNotes.cpp_parameters [ 42%] Generating UI/moc_CQOptPopulation.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptPopulation.cpp_parameters [ 42%] Generating UI/moc_CQOptimizationResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationResult.cpp_parameters [ 42%] Generating UI/moc_CQOptimizationWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp_parameters [ 42%] Generating UI/moc_CQOscillationTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOscillationTaskWidget.cpp_parameters [ 42%] Generating UI/moc_CQParameterEstimationResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterEstimationResult.cpp_parameters [ 42%] Generating UI/moc_CQParameterGroupDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterGroupView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupView.cpp_parameters [ 43%] Generating UI/moc_CQParameterOverviewDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterOverviewWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewWidget.cpp_parameters [ 43%] Generating UI/moc_CQParameterResultItemModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterResultItemModel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.h:0: Note: No relevant classes found. No output generated. [ 43%] Generating UI/moc_CQParameterSetsDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterSetsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPlotDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotDM.cpp_parameters [ 43%] Generating UI/moc_CQPlotsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPreferenceDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPreferenceDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItem.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemBar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemBar.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemText.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemText.cpp_parameters [ 44%] Generating UI/moc_CQPushButtonDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPushButtonDelegate.cpp_parameters [ 44%] Generating UI/moc_CQReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionDM.cpp_parameters [ 44%] Generating UI/moc_CQReactionsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionsWidget.cpp_parameters [ 44%] Generating UI/moc_CQReportDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDM.cpp_parameters [ 44%] Generating UI/moc_CQReportDefinition.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinition.cpp_parameters [ 44%] Generating UI/moc_CQReportDefinitionSelect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinitionSelect.cpp_parameters [ 44%] Generating UI/moc_CQReportListItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportListItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportListItem.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQReportsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportsWidget.cpp_parameters [ 44%] Generating UI/moc_CQSBMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSBMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSBMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLImportDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp_parameters [ 44%] Generating UI/moc_CQScanWidgetParameterSet.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp_parameters [ 44%] Generating UI/moc_CQScrolledDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScrolledDependenciesWidget.cpp_parameters [ 44%] Generating UI/moc_CQSensResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSensResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQSimpleSelectionTree.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSimpleSelectionTree.cpp_parameters [ 45%] Generating UI/moc_CQSortFilterProxyModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSortFilterProxyModel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSortFilterProxyModel.h:0: Note: No relevant classes found. No output generated. [ 45%] Generating UI/moc_CQSpecieDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpecieDM.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesDetail.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesWidget.cpp_parameters [ 45%] Generating UI/moc_CQSpinBoxDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpinBoxDelegate.cpp_parameters [ 45%] Generating UI/moc_CQSplashWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSplashWidget.cpp_parameters [ 45%] Generating UI/moc_CQStartValueReset.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQStartValueReset.cpp_parameters [ 45%] Generating UI/moc_CQSteadyStateResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSteadyStateResult.cpp_parameters [ 45%] Generating UI/moc_CQTSSAResultSubWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultSubWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSATimeScaleWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSATimeScaleWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAWidget.cpp_parameters [ 46%] Generating UI/moc_CQTabWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTabWidget.cpp_parameters [ 46%] Generating UI/moc_CQTableView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableView.cpp_parameters [ 46%] Generating UI/moc_CQTableWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableWidget.h:0: Note: No relevant classes found. No output generated. [ 46%] Generating UI/moc_CQTaskBtnWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskBtnWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskHeaderWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskHeaderWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskMethodWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskMethodWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskThread.cpp_parameters [ 46%] Generating UI/moc_CQTextDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTextDialog.cpp_parameters [ 46%] Generating UI/moc_CQThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQThread.cpp_parameters [ 46%] Generating UI/moc_CQTimeSensWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSensWidget.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesDM.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesWidget.cpp_parameters [ 46%] Generating UI/moc_CQTrajectoryWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTrajectoryWidget.cpp_parameters [ 46%] Generating UI/moc_CQUndoTester.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUndoTester.cpp_parameters [ 47%] Generating UI/moc_CQUnitDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDM.cpp_parameters [ 47%] Generating UI/moc_CQUnitDetail.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDetail.cpp_parameters [ 47%] Generating UI/moc_CQUnitsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitsWidget.cpp_parameters [ 47%] Generating UI/moc_CQUpdateAvogadro.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdateAvogadro.cpp_parameters [ 47%] Generating UI/moc_CQUpdatesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdatesWidget.cpp_parameters [ 47%] Generating UI/moc_CQValidator.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidator.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:0: Note: No relevant classes found. No output generated. [ 47%] Generating UI/moc_CQValidatorUnit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidatorUnit.cpp_parameters [ 47%] Generating UI/moc_CScanContainerWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanContainerWidget.cpp_parameters [ 47%] Generating UI/moc_CScanItemData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanItemData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:0: Note: No relevant classes found. No output generated. [ 47%] Generating UI/moc_CScanWidgetRandom.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRandom.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetRepeat.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRepeat.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetScan.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetScan.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetTask.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetTask.cpp_parameters [ 48%] Generating UI/moc_CUpDownSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CUpDownSubwidget.cpp_parameters [ 48%] Generating UI/moc_CWindowInterface.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CWindowInterface.cpp_parameters [ 48%] Generating UI/moc_ChemEqValidator.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ChemEqValidator.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ChemEqValidator.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiFileDialog.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiGuiTypes.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiGuiTypes.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiSlider.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiSlider.cpp_parameters [ 48%] Generating UI/moc_DataModelGUI.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DataModelGUI.cpp_parameters [ 48%] Generating UI/moc_DefaultplotDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DefaultplotDialog.cpp_parameters [ 48%] Generating UI/moc_FunctionWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp_parameters [ 48%] Generating UI/moc_MyLineEdit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_MyLineEdit.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserDialog.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserItem.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_ObjectBrowserWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserWidget.cpp_parameters [ 49%] Generating UI/moc_ReactionsWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp_parameters [ 49%] Generating UI/moc_ScanWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ScanWidget.cpp_parameters [ 49%] Generating UI/moc_SensWidgetComboBox.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensWidgetComboBox.cpp_parameters [ 49%] Generating UI/moc_SensitivitiesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensitivitiesWidget.cpp_parameters [ 49%] Generating UI/moc_SliderDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderDialog.cpp_parameters [ 49%] Generating UI/moc_SliderSettingsDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderSettingsDialog.cpp_parameters [ 49%] Generating UI/moc_StateSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_StateSubwidget.cpp_parameters [ 49%] Generating UI/moc_SteadyStateWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SteadyStateWidget.cpp_parameters [ 49%] Generating UI/moc_TaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_TaskWidget.cpp_parameters [ 49%] Generating UI/moc_copasiWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiWidget.cpp_parameters [ 49%] Generating UI/moc_copasiui3window.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiui3window.cpp_parameters [ 49%] Generating UI/moc_listviews.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_listviews.cpp_parameters [ 49%] Generating UI/moc_objectdebug.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_objectdebug.cpp_parameters [ 49%] Generating UI/moc_parametertable.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_parametertable.cpp_parameters [ 50%] Generating UI/moc_qtUtilities.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_qtUtilities.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:0: Note: No relevant classes found. No output generated. [ 50%] Generating UI/ui_CEntityProvenanceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CEntityProvenanceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CEntityProvenanceDialog.ui [ 50%] Generating UI/ui_CLNAResultSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.ui [ 50%] Generating UI/ui_CMCAResultSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.ui [ 50%] Generating UI/ui_CProvenanceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CProvenanceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProvenanceDialog.ui [ 50%] Generating UI/ui_CQAnalyticsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQAnalyticsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.ui [ 50%] Generating UI/ui_CQArrayAnnotationsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQArrayAnnotationsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.ui [ 50%] Generating UI/ui_CQBrowserPane.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQBrowserPane.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPane.ui [ 50%] Generating UI/ui_CQCheckModelWindow.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCheckModelWindow.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.ui [ 50%] Generating UI/ui_CQCompartment.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.ui [ 50%] Generating UI/ui_CQCompartmentCopyOptions.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartmentCopyOptions.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentCopyOptions.ui [ 51%] Generating UI/ui_CQCompartmentsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartmentsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.ui [ 51%] Generating UI/ui_CQCrossSectionTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCrossSectionTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.ui [ 51%] Generating UI/ui_CQDependenciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependenciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.ui [ 51%] Generating UI/ui_CQDependencyDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependencyDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyDialog.ui [ 51%] Generating UI/ui_CQDependencyWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependencyWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.ui [ 51%] Generating UI/ui_CQDifferentialEquations.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDifferentialEquations.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDifferentialEquations.ui [ 51%] Generating UI/ui_CQEFMListWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMListWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMListWidget.ui [ 51%] Generating UI/ui_CQEFMResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMResultWidget.ui [ 51%] Generating UI/ui_CQEFMWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMWidget.ui [ 51%] Generating UI/ui_CQEventWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.ui [ 51%] Generating UI/ui_CQEventsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.ui [ 51%] Generating UI/ui_CQExpandModelData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpandModelData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.ui [ 51%] Generating UI/ui_CQExperimentData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExperimentData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.ui [ 51%] Generating UI/ui_CQExperimentSelection.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExperimentSelection.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentSelection.ui [ 52%] Generating UI/ui_CQExpressionMmlStackedWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.ui [ 52%] Generating UI/ui_CQFittingItemWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingItemWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.ui [ 52%] Generating UI/ui_CQFittingResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.ui [ 52%] Generating UI/ui_CQFittingResultTab1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResultTab1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.ui [ 52%] Generating UI/ui_CQFittingWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.ui [ 52%] Generating UI/ui_CQFunctionsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFunctionsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.ui [ 52%] Generating UI/ui_CQGlobalQuantitiesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQGlobalQuantitiesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.ui [ 52%] Generating UI/ui_CQLNAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLNAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.ui [ 52%] Generating UI/ui_CQLayoutsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLayoutsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.ui [ 52%] Generating UI/ui_CQLyapResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLyapResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.ui [ 52%] Generating UI/ui_CQLyapWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLyapWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.ui [ 52%] Generating UI/ui_CQMCAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMCAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.ui [ 52%] Generating UI/ui_CQMathMatrixWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMathMatrixWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.ui [ 53%] Generating UI/ui_CQMatrixDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMatrixDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMatrixDialog.ui /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:1: Warning 401: Base class 'CVectorCore< CFunction const * >' undefined. ../swig/CVector.i:137: Warning 401: 'CVectorCore< CFunction const * >' must be defined before it is used as a base class. /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:1: Warning 401: Base class 'CVectorCore< CObjectInterface const * >' undefined. ../swig/CVector.i:139: Warning 401: 'CVectorCore< CObjectInterface const * >' must be defined before it is used as a base class. [ 53%] Generating UI/ui_CQMergingData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMergingData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.ui [ 53%] Generating UI/ui_CQMessageBox.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMessageBox.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.ui [ 53%] Generating UI/ui_CQModelValue.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.ui [ 53%] Generating UI/ui_CQModelWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.ui [ 53%] Generating UI/ui_CQMoietiesTaskResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.ui [ 53%] Generating UI/ui_CQMoietiesTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskWidget.ui [ 53%] Generating UI/ui_CQMultipleSelectionDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMultipleSelectionDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMultipleSelectionDialog.ui [ 53%] Generating UI/ui_CQNameSelectionDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQNameSelectionDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNameSelectionDialog.ui [ 53%] Generating UI/ui_CQNotes.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQNotes.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.ui [ 53%] Generating UI/ui_CQOptimizationResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.ui [ 53%] Generating UI/ui_CQOptimizationWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.ui [ 53%] Generating UI/ui_CQOscillationTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOscillationTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOscillationTaskWidget.ui [ 54%] Generating UI/ui_CQParameterEstimationResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterEstimationResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.ui /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:59: Warning 401: Nothing known about base class 'SBMLUnitSupport'. Ignored. [ 54%] Generating UI/ui_CQParameterOverviewWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterOverviewWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.ui [ 54%] Generating UI/ui_CQParameterSetWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterSetWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetWidget.ui [ 54%] Generating UI/ui_CQParameterSetsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterSetsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.ui [ 54%] Generating UI/ui_CQParametersWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParametersWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParametersWidget.ui [ 54%] Generating UI/ui_CQPlotsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQPlotsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.ui [ 54%] Generating UI/ui_CQPreferenceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQPreferenceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPreferenceDialog.ui [ 54%] Generating UI/ui_CQProgressDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressDialog.ui [ 54%] Generating UI/ui_CQProgressItem.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItem.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItem.ui [ 54%] Generating UI/ui_CQProgressItemBar.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItemBar.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemBar.ui [ 54%] Generating UI/ui_CQProgressItemText.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItemText.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemText.ui [ 54%] Generating UI/ui_CQReactionsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReactionsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.ui [ 54%] Generating UI/ui_CQReportDefinition.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportDefinition.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.ui [ 54%] Generating UI/ui_CQReportDefinitionSelect.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportDefinitionSelect.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.ui [ 55%] Generating UI/ui_CQReportsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.ui [ 55%] Generating UI/ui_CQSEDMLImportDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.ui [ 55%] Generating UI/ui_CQScanWidgetParameterSet.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQScanWidgetParameterSet.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.ui [ 55%] Generating UI/ui_CQScrolledDependenciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQScrolledDependenciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.ui [ 55%] Generating UI/ui_CQSensResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSensResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.ui [ 55%] Generating UI/ui_CQSpeciesDetail.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.ui [ 55%] Generating UI/ui_CQSpeciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.ui [ 55%] Generating UI/ui_CQSplashWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSplashWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSplashWidget.ui [ 55%] Generating UI/ui_CQStartValueReset.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQStartValueReset.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQStartValueReset.ui [ 55%] Generating UI/ui_CQSteadyStateResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.ui [ 55%] Generating UI/ui_CQTSSAResultSubWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.ui [ 55%] Generating UI/ui_CQTSSAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.ui [ 55%] Generating UI/ui_CQTabWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTabWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.ui [ 56%] Generating UI/ui_CQTaskBtnWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskBtnWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskBtnWidget.ui [ 56%] Generating UI/ui_CQTaskHeaderWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskHeaderWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskHeaderWidget.ui [ 56%] Generating UI/ui_CQTaskMethodWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskMethodWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskMethodWidget.ui [ 56%] Generating UI/ui_CQTextDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTextDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTextDialog.ui [ 56%] Generating UI/ui_CQTimeSensWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTimeSensWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.ui [ 56%] Generating UI/ui_CQTimeSeriesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTimeSeriesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.ui [ 56%] Generating UI/ui_CQTrajectoryWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTrajectoryWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.ui [ 56%] Generating UI/ui_CQUndoHistoryDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUndoHistoryDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoHistoryDialog.ui [ 56%] Generating UI/ui_CQUnitDetail.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUnitDetail.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.ui [ 56%] Generating UI/ui_CQUnitsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUnitsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.ui [ 56%] Generating UI/ui_CQUpdateAvogadro.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUpdateAvogadro.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdateAvogadro.ui [ 56%] Generating UI/ui_CScanWidgetRandom.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetRandom.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRandom.ui [ 56%] Generating UI/ui_CScanWidgetRepeat.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetRepeat.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRepeat.ui [ 56%] Generating UI/ui_CScanWidgetScan.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetScan.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetScan.ui [ 57%] Generating UI/ui_CScanWidgetTask.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetTask.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetTask.ui [ 57%] Generating UI/ui_CUpDownSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CUpDownSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CUpDownSubwidget.ui [ 57%] Generating UI/ui_DefaultplotDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_DefaultplotDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DefaultplotDialog.ui [ 57%] Generating UI/ui_FunctionWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.ui [ 57%] Generating UI/ui_ReactionsWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.ui [ 57%] Generating UI/ui_SensitivitiesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SensitivitiesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.ui [ 57%] Generating UI/ui_SliderDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SliderDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.ui [ 57%] Generating UI/ui_SliderSettingsDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SliderSettingsDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderSettingsDialog.ui [ 57%] Generating UI/ui_StateSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.ui [ 57%] Generating UI/ui_SteadyStateWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SteadyStateWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.ui [ 57%] Generating UI/ui_objectdebug.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_objectdebug.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/objectdebug.ui [ 57%] Generating barChart/moc_CQ3DBarsModifier.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/barChart && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/barChart/moc_CQ3DBarsModifier.cpp_parameters [ 57%] Generating layoutUI/moc_BezierCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_BezierCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/BezierCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CArrow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CArrow.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CArrow.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CCompartmentGraphNode.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CCompartmentGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CCompartmentGraphNode.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CDataEntity.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CDataEntity.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CDataEntity.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphNode.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CLabel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CLabel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CLabel.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CQAutolayoutWizard.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQAutolayoutWizard.cpp_parameters [ 58%] Generating layoutUI/moc_CQCurrentValueTable.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQCurrentValueTable.cpp_parameters [ 58%] Generating layoutUI/moc_CQLayoutThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQLayoutThread.cpp_parameters [ 58%] Generating layoutUI/moc_CQPlayerControlWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQPlayerControlWidget.cpp_parameters [ 58%] Generating layoutUI/moc_CQSpringLayoutParameterWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQSpringLayoutParameterWindow.cpp_parameters [ 58%] Generating layoutUI/moc_CSimSummaryInfo.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CSimSummaryInfo.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CSimSummaryInfo.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CVisParameters.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CVisParameters.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CVisParameters.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_BandedGraphWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_BandedGraphWidget.cpp_parameters [ 58%] Generating plotUI/moc_C2DCurveData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DCurveData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_C2DPlotCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DPlotCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DPlotCurve.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CBandedGraphData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CBandedGraphData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CBandedGraphData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CHistoCurveData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CHistoCurveData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CHistoCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CLinearColorMap.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CLinearColorMap.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CLinearColorMap.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_COutputHandlerPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_COutputHandlerPlot.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotInterface.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotInterface.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotSpectogram.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotSpectogram.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotSpectogram.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CQAdvancedPlotSettings.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQAdvancedPlotSettings.cpp_parameters [ 58%] Generating plotUI/moc_CQCustomPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQCustomPlot.cpp_parameters [ 58%] Generating plotUI/moc_CQDataVizPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQDataVizPlot.cpp_parameters [ 59%] Generating plotUI/moc_CQExtender.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQExtender.cpp_parameters [ 59%] Generating plotUI/moc_CQMarchingSquares.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQMarchingSquares.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotColors.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotColors.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotColors.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotEditWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotEditWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotSubwidget.cpp_parameters [ 59%] Generating plotUI/moc_CQSpectogramWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQSpectogramWidget.cpp_parameters [ 59%] Generating plotUI/moc_CQtChartsPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQtChartsPlot.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQtChartsPlot.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQwtPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQwtPlot.cpp_parameters [ 59%] Generating plotUI/moc_CSpectorgramData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CSpectorgramData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_HistoWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_HistoWidget.cpp_parameters [ 59%] Generating plotUI/moc_curve2dwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_curve2dwidget.cpp_parameters [ 59%] Generating plotUI/moc_plotwindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_plotwindow.cpp_parameters [ 59%] Generating plotUI/moc_scrollbar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollbar.cpp_parameters [ 59%] Generating plotUI/moc_scrollzoomer.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollzoomer.cpp_parameters [ 59%] Generating plotUI/ui_BandedGraphWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_BandedGraphWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.ui [ 59%] Generating plotUI/ui_CQAdvancedPlotSettings.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQAdvancedPlotSettings.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQAdvancedPlotSettings.ui [ 59%] Generating plotUI/ui_CQPlotSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQPlotSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.ui [ 59%] Generating plotUI/ui_CQSpectogramWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQSpectogramWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.ui [ 60%] Generating plotUI/ui_HistoWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_HistoWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.ui [ 60%] Generating plotUI/ui_PlotSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_PlotSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/PlotSubwidget.ui [ 60%] Generating plotUI/ui_curve2dwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_curve2dwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.ui [ 60%] Generating qlayout/moc_CQAnimationControls.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationControls.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationSettingsEditor.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationSettingsEditor.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationWindow.cpp_parameters [ 60%] Generating qlayout/moc_CQConnectionGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQConnectionGraphicsItem.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiAnimation.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiAnimation.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQCopasiEffect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiEffect.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiGraphicsItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescription.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescription.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescription.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescriptionEdit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescriptionEdit.cpp_parameters [ 60%] Generating qlayout/moc_CQElementProperties.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQElementProperties.cpp_parameters [ 61%] Generating qlayout/moc_CQLabelGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLabelGraphicsItem.cpp_parameters [ 61%] Generating qlayout/moc_CQLayoutScene.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutScene.cpp_parameters [ 61%] Generating qlayout/moc_CQLayoutView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutView.cpp_parameters [ 61%] Generating qlayout/moc_CQRenderConverter.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRenderConverter.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.h:0: Note: No relevant classes found. No output generated. [ 61%] Generating qlayout/moc_CQRoundedRect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRoundedRect.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRoundedRect.h:0: Note: No relevant classes found. No output generated. [ 61%] Generating qlayout/moc_CQStyledGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQStyledGraphicsItem.cpp_parameters [ 61%] Generating qlayout/moc_CQZoomableView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQZoomableView.cpp_parameters [ 61%] Generating qlayout/ui_CQAnimationControls.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationControls.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationControls.ui [ 62%] Generating qlayout/ui_CQAnimationSettingsEditor.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationSettingsEditor.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationSettingsEditor.ui [ 62%] Generating qlayout/ui_CQAnimationWindow.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationWindow.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.ui [ 62%] Generating qlayout/ui_CQEffectDescriptionEdit.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQEffectDescriptionEdit.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescriptionEdit.ui [ 62%] Generating qlayout/ui_CQElementProperties.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQElementProperties.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.ui [ 62%] Generating qrc_copasi.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/rcc --name copasi --output /builddir/build/BUILD/COPASI-Build-284/copasi/qrc_copasi.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/copasi.qrc [ 62%] Generating resourcesUI/moc_CQIconResource.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/moc_CQIconResource.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/CQIconResource.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CMathMLToTeX.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CMathMLToTeX.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CStructureParser.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CStructureParser.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating undoUI/moc_CQUndoDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDM.cpp_parameters [ 63%] Generating undoUI/moc_CQUndoDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDialog.cpp_parameters [ 63%] Generating undoUI/ui_CQUndoDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/ui_CQUndoDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDialog.ui [ 63%] Generating wizard/moc_wizard.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:41: Warning 509: Overloaded method CDataValue::CDataValue(int const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:37: Warning 509: as it is shadowed by CDataValue::CDataValue(CDataValue::Type const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:37: Warning 509: Overloaded method CDataValue::CDataValue(CDataValue::Type const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:41: Warning 509: as it is shadowed by CDataValue::CDataValue(int const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:51: Warning 509: Overloaded method CDataValue::CDataValue(std::vector< CData,std::allocator< CData > > const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:50: Warning 509: as it is shadowed by CDataValue::CDataValue(std::vector< CDataValue,std::allocator< CDataValue > > const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:50: Warning 509: Overloaded method CDataValue::CDataValue(std::vector< CDataValue,std::allocator< CDataValue > > const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:51: Warning 509: as it is shadowed by CDataValue::CDataValue(std::vector< CData,std::allocator< CData > > const &). cd /builddir/build/BUILD/COPASI-Build-284/copasi/wizard && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/wizard/moc_wizard.cpp_parameters cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASIUI.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASIUI.dir/build.make copasi/CMakeFiles/libCOPASIUI.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject * >::operator ()(size_t const &). /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject const * >::operator ()(size_t const &). /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CFunction const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CFunction const * >::operator ()(size_t const &). /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CObjectInterface const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CObjectInterface const * >::operator ()(size_t const &). ../swig/CCopasiMessage.i:55: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,size_t) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:259: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,size_t,...). ../swig/CCopasiMessage.i:43: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:250: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *,...). /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:250: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *,...) effectively ignored, ../swig/CCopasiMessage.i:43: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *). [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQCreatorDM.cpp [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQModifiedDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -P /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/../common/patch-wrapper.cmake -- Patching C++ wrapper cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DVERSION=4.42.284 -P /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/patch-python.cmake -- Patching Python wrapper cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 63%] Building CXX object copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -Dbinding_python_lib_EXPORTS -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python -I/usr/include/python3.12 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -MF CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o.d -o CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/local.cpp:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4335: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:58: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:46, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/local.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CDataModel>’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:241:54: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CDataModel]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CDataModel; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CDataModel; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CDataModel; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:245:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvaluationTree>’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:265:59: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvaluationTree]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvaluationTree; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvaluationTree; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvaluationTree; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘CDataObject* CVector_Sl_CDataObject_Sm__Sg__get(CVector<CDataObject*>*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6902:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6902 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CDataObject* CVector_Sl_CDataObject_SS_const_Sm__Sg__get(CVector<const CDataObject*>*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6916:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6916 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CFunction* CVector_Sl_CFunction_SS_const_Sm__Sg__get(CVector<const CFunction*>*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6924:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6924 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CObjectInterface* CVector_Sl_CObjectInterface_SS_const_Sm__Sg__get(CVector<const CObjectInterface*>*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6938:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6938 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:10692:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotItem>’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:10769:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotItem]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotItem; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotItem; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotItem; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘std::vector<double> CDataHandler_getNthRow(CDataHandler*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:14243:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::vector<double> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14243 | if (index >= data.size()) | ~~~~~~^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15414: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15467:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15517: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeViewItem.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQReferenceDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SBMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:198627:3: warning: deleting object of polymorphic class type ‘SBMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 198627 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_CSBMLExporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:199481:3: warning: deleting object of polymorphic class type ‘CSBMLExporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 199481 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SEDMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:200350:3: warning: deleting object of polymorphic class type ‘SEDMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 200350 | delete arg1; | ^~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -MF CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/barChart/CQ3DBarsModifier.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/BezierCurve.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CArrow.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp: In member function ‘void CQSelectionWizardPage::fillTree(const CModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:417:46: warning: enum constant in boolean context [-Wint-in-bool-context] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:417:66: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:434:54: warning: enum constant in boolean context [-Wint-in-bool-context] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:434:74: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CCompartmentGraphNode.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CDataEntity.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphCurve.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:163:16: warning: ‘virtual void CLGraphicalObject::exportToSBML(GraphicalObject*, const std::map<const CDataObject*, SBase*>&, std::map<std::__cxx11::basic_string<char>, const SBase*>&) const’ was hidden [-Woverloaded-virtual=] 163 | virtual void exportToSBML(GraphicalObject * sbmlobject, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:95:16: note: by ‘virtual void CLMetabGlyph::exportToSBML(SpeciesGlyph*, const std::map<const CDataObject*, SBase*>&, std::map<std::__cxx11::basic_string<char>, const SBase*>&) const’ 95 | virtual void exportToSBML(SpeciesGlyph * g, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:163:16: warning: ‘virtual void CLGraphicalObject::exportToSBML(GraphicalObject*, const std::map<const CDataObject*, SBase*>&, std::map<std::__cxx11::basic_string<char>, const SBase*>&) const’ was hidden [-Woverloaded-virtual=] 163 | virtual void exportToSBML(GraphicalObject * sbmlobject, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:168:16: note: by ‘virtual void CLCompartmentGlyph::exportToSBML(CompartmentGlyph*, const std::map<const CDataObject*, SBase*>&, std::map<std::__cxx11::basic_string<char>, const SBase*>&) const’ 168 | virtual void exportToSBML(CompartmentGlyph * cg, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:163:16: warning: ‘virtual void CLGraphicalObject::exportToSBML(GraphicalObject*, const std::map<const CDataObject*, SBase*>&, std::map<std::__cxx11::basic_string<char>, const SBase*>&) const’ was hidden [-Woverloaded-virtual=] 163 | virtual void exportToSBML(GraphicalObject * sbmlobject, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:258:16: note: by ‘virtual void CLTextGlyph::exportToSBML(TextGlyph*, const std::map<const CDataObject*, SBase*>&, std::map<std::__cxx11::basic_string<char>, const SBase*>&) const’ 258 | virtual void exportToSBML(TextGlyph * g, | ^~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CLabel.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQLayoutThread.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQLayoutThread.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQPlayerControlWidget.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQSpringLayoutParameterWindow.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CSimSummaryInfo.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CVisParameters.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationControls.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationSettingsEditor.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:128:88: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp: In member function ‘virtual void QCustomTimeCourseAnimation::getScales(std::vector<double>&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:348:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 348 | if (index == C_INVALID_INDEX) [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiEffect.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescription.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescriptionEdit.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLabelGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLabelGraphicsItem.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLCurve.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:184830:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4787:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 4787 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:13961:14: note: ‘success’ was declared here 13961 | bool success; | ^~~~~~~ In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRaw’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:184792:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4787:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 4787 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRaw’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:13941:14: note: ‘success’ was declared here 13941 | bool success; | ^~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRoundedRect.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQStyledGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQStyledGraphicsItem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQZoomableView.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DCurveData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DPlotCurve.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CBandedGraphData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CHistoCurveData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CLinearColorMap.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/plotwindow.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.cpp In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_processRaw’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:184890:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4787:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 4787 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_processRaw’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:14005:14: note: ‘success’ was declared here 14005 | bool success; | ^~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotSpectogram.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQAdvancedPlotSettings.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual bool CQCustomPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:549:8: warning: variable ‘needLeft’ set but not used [-Wunused-but-set-variable] 549 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual void CQCustomPlot::wheelEvent(QWheelEvent*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1535:50: warning: ‘QPoint QWheelEvent::pos() const’ is deprecated: Use position() [-Wdeprecated-declarations] 1535 | QCPLayerable * element = layerableAt(event->pos(), true); | ~~~~~~~~~~^~ In file included from /usr/include/qt5/QtGui/QPaintEvent:1, from /usr/include/qcustomplot.h:56, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:24: /usr/include/qt5/QtGui/qevent.h:225:19: note: declared here 225 | inline QPoint pos() const { return p.toPoint(); } | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1632:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 1632 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1755:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1755 | if (current_count != data_size && pY2) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1759:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1759 | for (int i = current_count; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1784:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1784 | if (current_count != data_size && helper) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1802:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 1802 | if (data_size != current_count) | ~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1815:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1815 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1853:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1853 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1894:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CQMarchingSquares::levelPaths>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1894 | for (int l = 0; l < contours.size(); l++) | ~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1897:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<QPolygonF>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1897 | for (int j = 0; j < contours[l].size(); j++) | ~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::resizeCurveData(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1978:48: warning: unused variable ‘data’ [-Wunused-variable] 1978 | std::vector< CVector< double > * > & data = mData[activity]; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::initializeIndependentData(const CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2179:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2179 | for (int c = 0; c < numCols; ++c) | ~~^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2170:14: warning: unused variable ‘independentObjects’ [-Wunused-variable] 2170 | auto & independentObjects = pExperiment->getIndependentObjects(); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateSteadyStateInfo(int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2203:9: warning: unused variable ‘model’ [-Wunused-variable] 2203 | auto& model = *CRootContainer::getDatamodelList()->begin(); | ^~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:47:1: warning: when initialized here [-Wreorder] 47 | CQDataVizPlot::CQDataVizPlot(QWidget * parent) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(const CPlotSpecification*, QWidget*, PlotMode)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:72:1: warning: when initialized here [-Wreorder] 72 | CQDataVizPlot::CQDataVizPlot(const CPlotSpecification * plotspec, QWidget * parent, PlotMode mode) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:267:8: warning: unused variable ‘needLeft’ [-Wunused-variable] 267 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:268:8: warning: unused variable ‘needRight’ [-Wunused-variable] 268 | bool needRight = false; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:372:12: warning: unused variable ‘isSpectogram’ [-Wunused-variable] 372 | bool isSpectogram = pItem->getType() == CPlotItem::spectogram; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In function ‘std::set<double> resizeRange(std::set<double>&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:581:20: warning: comparison of integer expressions of different signedness: ‘std::set<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 581 | if (range.size() < maxRange) | ~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘void CQDataVizPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:634:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 634 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:656:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 656 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:704:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 704 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:710:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 710 | for (auto i = 0; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:641:12: warning: unused variable ‘curve_type’ [-Wunused-variable] 641 | auto curve_type = (*itCurves)->property("curve_type").toInt(); | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:628:8: warning: unused variable ‘data_changed’ [-Wunused-variable] 628 | bool data_changed = false; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::saveData(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:1024:26: warning: unused variable ‘scatter’ [-Wunused-variable] 1024 | QScatter3DSeries * scatter = qobject_cast< QScatter3DSeries * >(curve.second); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:1019:8: warning: unused variable ‘FirstHistogram’ [-Wunused-variable] 1019 | bool FirstHistogram = true; | ^~~~~~~~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQExtender.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:76:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 76 | switch (cellSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘void CQMarchingSquares::isoSubpath(IsoCell*, int, int, levelPaths&, int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:547:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 547 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:584:14: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 584 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:90:1: warning: control reaches end of non-void function [-Wreturn-type] 90 | } | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotColors.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp: In member function ‘void CQPlotSubwidget::addSpectrum()’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:592:14: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 592 | size_t imax; | ^~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQtChartsPlot.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:49: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp: In member function ‘virtual double CSpectorgramData::value(double, double) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp:342:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 342 | if (xpos == mSizeX) --xpos; | ~~~~~^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp:344:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 344 | if (ypos == mSizeY) --ypos; | ~~~~~^~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp: In member function ‘HistoWidget::buttonPressedX()’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:90:66: warning: ‘nonnull’ argument ‘this’ compared to NULL [-Wnonnull-compare] 90 | while (!(pParent = dynamic_cast< CQPlotSubwidget * >(tmp)) && this) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/plotwindow.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/scrollbar.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/scrollzoomer.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:62:3: warning: ‘template<class T> class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList<QString> mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template <class T> class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mNode(QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:183:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 183 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:187:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 187 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mtableNode(QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:210:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 210 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:214:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 214 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:62:3: warning: ‘template<class T> class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList<QString> mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template <class T> class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:69:3: warning: ‘template<class T> class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 69 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template <class T> class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:337:3: warning: ‘template<class T> class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 337 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template <class T> class QLinkedList; | ^~~~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/wizard.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/AboutDialog.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CColorScale.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:227:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:57:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:298:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:69:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/analytics/CAnalyticsTask.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidgetDM.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBaseDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBaseTreeDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPane.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:16: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:457:91: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp: In member function ‘void CQBrowserPaneDM::createStaticDM()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 993 | switch (pNodeInfo->node) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Compartments’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Species’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Reactions’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Events’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSets’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Plots’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplates’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp: In constructor ‘CQCheckModelWindow::CQCheckModelWindow(CopasiUI3Window*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:88:47: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 88 | mpSelection->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:21: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:88:47: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 88 | mpSelection->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQComboDelegate.cpp [ 70%] Linking CXX shared library _COPASI.so cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -shared -Wl,-soname,_COPASI.so -o _COPASI.so CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o ../../libCOPASISE.a -lpython3.12 /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat -lcrossguid2 -luuid /usr/lib64/libraptor.so /usr/lib64/libsbml.so.5.19.0 -lbz2 -lz -lminizip -lz -lxml2 /usr/lib64/libexpat.so -lflexiblas [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentCopyOptions.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp: In member function ‘virtual void CQCompartmentsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCopasiApplication.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDateTimeEditDelegate.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyDialog.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDifferentialEquations.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMListWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMResultWidget.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMWidget.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp: In member function ‘virtual void CQEventsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:250:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 250 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp: In member function ‘void CQExperimentData::slotFileEdit()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:628:10: warning: unused variable ‘i’ [-Wunused-variable] 628 | size_t i = mpExperimentSetCopy->getExperimentCount() - 1; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp: In member function ‘bool CQExperimentData::saveTable(CExperiment*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:1537:8: warning: variable ‘FoundTime’ set but not used [-Wunused-but-set-variable] 1537 | bool FoundTime = false; | ^~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentSelection.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new: In member function ‘intialize’: /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h: In constructor ‘CQExpressionWidget::CQExpressionWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:273:15: warning: ‘CQExpressionWidget::mCursor’ will be initialized after [-Wreorder] 273 | QTextCursor mCursor; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:272:28: warning: ‘CQExpressionHighlighter* CQExpressionWidget::mpExpressionHighlighter’ [-Wreorder] 272 | CQExpressionHighlighter *mpExpressionHighlighter; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:218:1: warning: when initialized here [-Wreorder] 218 | CQExpressionWidget::CQExpressionWidget(QWidget * parent, const char * name) | ^~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/x86_64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /usr/include/qt5/QtCore/qbytearray.h:52, from /usr/include/qt5/QtCore/qvariant.h:44, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:25: In member function ‘std::__new_allocator<COptItem*>::construct<COptItem*, COptItem* const&>(COptItem**, COptItem* const&)void’, inlined from ‘std::allocator_traits<std::allocator<COptItem*> >::construct<COptItem*, COptItem* const&>(std::allocator<COptItem*>&, COptItem**, COptItem* const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector<COptItem*, std::allocator<COptItem*> >::push_back(COptItem* const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘CQFittingItemWidget::slotNew()’ at /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:1137:25: /usr/include/c++/13/bits/new_allocator.h:191:11: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotNew()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:1119:13: note: ‘pItem’ declared here 1119 | COptItem *pItem; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotParamEdit()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:452:29: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 452 | pItem->setObjectCN(Selection[i]->getCN()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:434:21: note: ‘pItem’ declared here 434 | COptItem *pItem; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotCopy()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:952:15: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 952 | setTableText((int) row, pItem); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:925:13: note: ‘pItem’ declared here 925 | COptItem *pItem; | ^~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResult.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadExperimentSetIntoTree(const CExperimentSet&, QTreeWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: variable ‘pItem’ set but not used [-Wunused-but-set-variable] 144 | QTreeWidgetItem* pItem = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:208:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘virtual bool CQFittingResult::enterProtected()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:275:32: warning: unused variable ‘Solutions’ [-Wunused-variable] 275 | const CVector< C_FLOAT64 > & Solutions = mpProblem->getSolutionVariables(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:276:32: warning: unused variable ‘StdDeviations’ [-Wunused-variable] 276 | const CVector< C_FLOAT64 > & StdDeviations = mpProblem->getVariableStdDeviations(); | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:277:32: warning: unused variable ‘Gradients’ [-Wunused-variable] 277 | const CVector< C_FLOAT64 > & Gradients = mpProblem->getVariableGradients(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:525:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 525 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:530:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 530 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp: In member function ‘virtual bool CQFittingWidget::taskFinishedEvent()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:309:8: warning: unused variable ‘result’ [-Wunused-variable] 309 | bool result = TaskWidget::taskFinishedEvent(); | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFluxModeDM.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp: In member function ‘virtual void CQFunctionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:243:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 243 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp: In member function ‘virtual void CQGlobalQuantitiesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:251:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 251 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:60:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CLayout>’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:77:64: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore<double>&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:69:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMathMatrixWidget.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMatrixDialog.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp: In member function ‘virtual int CQMessageBox::exec()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:454:7: warning: unused variable ‘result’ [-Wunused-variable] 454 | int result = QDialog::exec(); | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h: In constructor ‘CQModelValue::CQModelValue(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:65:15: warning: ‘CQModelValue::mObjectCNToCopy’ will be initialized after [-Wreorder] 65 | CCommonName mObjectCNToCopy; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:57:17: warning: ‘CModelValue* CQModelValue::mpModelValue’ [-Wreorder] 57 | CModelValue * mpModelValue; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:50:1: warning: when initialized here [-Wreorder] 50 | CQModelValue::CQModelValue(QWidget* parent, const char* name) | ^~~~~~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidatorUnit.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskWidget.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMultipleSelectionDialog.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNameSelectionDialog.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:65: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual QValidator::State CQValidatorXML::validate(QString&, int&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:85:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 85 | QXmlSimpleReader Validator; | ^~~~~~~~~ In file included from /usr/include/qt5/QtXml/QXmlInputSource:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:24: /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:86:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 86 | QXmlInputSource Input; | ^~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:153:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 153 | return QXmlDefaultHandler::startElement(namespaceURI, localName, qName, atts); | ^~~~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:163:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 163 | return QXmlDefaultHandler::endElement(namespaceURI, localName, qName); | ^~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQEllipseItem::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:90:12: warning: unused variable ‘m11’ [-Wunused-variable] 90 | double m11 = painter->transform().m11(); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:472:34: warning: comparison of integer expressions of different signedness: ‘std::vector<CVector<double>*>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 472 | if (mPopulation.size() > mMaxIterations) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In function ‘QString vec_to_string(CVector<double>*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:541:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 541 | for (int i = 1; i < pVec->size(); ++i) | ~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::update()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:720:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 720 | i == mMinIndex, | ~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:743:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 743 | i == mMinIndex, | ~~^~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:195:18: warning: ‘virtual CIssue CEvaluationTree::compile()’ was hidden [-Woverloaded-virtual=] 195 | virtual CIssue compile(); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:96:18: note: by ‘virtual CIssue CExpression::compile(CObjectInterface::ContainerList)’ 96 | virtual CIssue compile(CObjectInterface::ContainerList listOfContainer = | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:98:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp: In member function ‘void CQOptimizationResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:191:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 191 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:196:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 196 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOscillationTaskWidget.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp: In member function ‘void CQParameterEstimationResult::applyToModelState()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:309:15: warning: unused variable ‘current’ [-Wunused-variable] 309 | int current = model->rowCount(); | ^~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterGroupDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterGroupView.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp: In static member function ‘static QVariant CQParameterOverviewDM::diffData(const CModelParameter*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:373:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 373 | switch (pNode->getCompareResult()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:400:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 400 | switch (pNode->getCompareResult()) | ^ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp: In member function ‘virtual QVariant CQParameterSetsDM::data(const QModelIndex&, int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:91:37: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 91 | if (mpListOfParameterSets->size() <= index.row()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp: In member function ‘virtual void CQParameterSetsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:267:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 267 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp: In member function ‘virtual void CQPlotsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:275:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 275 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPreferenceDialog.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressDialog.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItem.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemBar.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemText.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/qabstractitemmodel.h:43, from /usr/include/qt5/QtCore/qabstractproxymodel.h:43, from /usr/include/qt5/QtCore/qsortfilterproxymodel.h:43, from /usr/include/qt5/QtCore/QSortFilterProxyModel:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:13: In member function ‘QMapNode<QAbstractButton*, QModelIndex>::lowerBound(QAbstractButton* const&)’, inlined from ‘QMapData<QAbstractButton*, QModelIndex>::findNode(QAbstractButton* const&) const’ at /usr/include/qt5/QtCore/qmap.h:288:33, inlined from ‘QMap<QAbstractButton*, QModelIndex>::operator[](QAbstractButton* const&)’ at /usr/include/qt5/QtCore/qmap.h:681:26, inlined from ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’ at /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:98:25: /usr/include/qt5/QtCore/qmap.h:153:9: warning: ‘pEditor’ may be used uninitialized [-Wmaybe-uninitialized] 153 | if (!qMapLessThanKey(n->key, akey)) { | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp: In member function ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:58:21: note: ‘pEditor’ was declared here 58 | QAbstractButton * pEditor; | ^~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp: In constructor ‘CQReactionsWidget::CQReactionsWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:81:22: warning: unused variable ‘pWindow’ [-Wunused-variable] 81 | CopasiUI3Window *pWindow = dynamic_cast<CopasiUI3Window * >(parent->parent()); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp: In member function ‘virtual void CQReactionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:230:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportListItem.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp: In member function ‘virtual void CQReportsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:229:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 229 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSBMLFileDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLFileDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp: In member function ‘virtual bool CQScanWidgetParameterSet::save(CCopasiParameterGroup*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:112:1: warning: control reaches end of non-void function [-Wreturn-type] 112 | } | ^ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSensResultWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp:85:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h: In constructor ‘CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h:116:40: warning: ‘CQSimpleSelectionTree::mpOutputVector’ will be initialized after [-Wreorder] 116 | std::vector< const CDataObject * > * mpOutputVector; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h:112:26: warning: ‘CExpressionGenerator* CQSimpleSelectionTree::mpExpressionGenerator’ [-Wreorder] 112 | CExpressionGenerator * mpExpressionGenerator; | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: when initialized here [-Wreorder] 44 | CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget *parent) | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:427:64: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSortFilterProxyModel.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp: In member function ‘virtual void CQSpeciesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpinBoxDelegate.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSplashWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQStartValueReset.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:80:65: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:87:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:82:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSATimeScaleWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:224:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp: In member function ‘CQTSSAWidget::runTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:231:30: warning: ‘this’ pointer is null [-Wnonnull] 231 | mpTSSMethod->emptyVectors(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:157:8: note: in a call to non-static member function ‘CTSSAMethod::emptyVectors()’ 157 | void emptyVectors(); | ^~~~~~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableView.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskBtnWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskHeaderWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskMethodWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskThread.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTextDialog.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQThread.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 78%] Built target binding_python_lib /usr/bin/gmake -f copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build.make copasi/CopasiSE/CMakeFiles/CopasiSE.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CMakeFiles/CopasiSE.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build.make copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 78%] Building CXX object copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -MF CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o.d -o CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:31: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:525:25: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp: In function ‘int runScheduledTasks(CProcessReport*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:525:10: warning: unused variable ‘imax’ [-Wunused-variable] 525 | size_t imax = TaskList.size(); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp: In function ‘exportSBML()’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:827:27: warning: ‘SBMLSchema’ may be used uninitialized [-Wmaybe-uninitialized] 827 | copasi::SBMLSchema_enum SBMLSchema; | ^~~~~~~~~~ [ 78%] Linking CXX executable CopasiSE cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSE.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -o CopasiSE ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so /usr/lib64/libuuid.so /usr/lib64/libraptor.so /usr/lib64/libsbml.so.5.19.0 /usr/lib64/libbz2.so /usr/lib64/libz.so -lminizip -lz /usr/lib64/libxml2.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesDM.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:48: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore<double>&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:88: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:169, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ChemEqValidator.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:20: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp: In member function ‘void CQUndoTester::testModelDetail()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:163:11: warning: unused variable ‘pModel’ [-Wunused-variable] 163 | CModel* pModel = (*CRootContainer::getDatamodelList())[0].getModel(); | ^~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp: In member function ‘virtual void CQUnitsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:245:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdateAvogadro.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidatorUnit.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanContainerWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRandom.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRepeat.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetScan.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetTask.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CUpDownSubwidget.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CWindowInterface.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiFileDialog.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiSlider.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:58: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:25: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:71: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h: In constructor ‘DataModelGUI::DataModelGUI(QObject*, CDataModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h:183:24: warning: ‘DataModelGUI::mpOutputHandlerPlot’ will be initialized after [-Wreorder] 183 | COutputHandlerPlot * mpOutputHandlerPlot; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h:182:16: warning: ‘CDataModel* DataModelGUI::mpDataModel’ [-Wreorder] 182 | CDataModel * mpDataModel; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:96:1: warning: when initialized here [-Wreorder] 96 | DataModelGUI::DataModelGUI(QObject * parent, CDataModel * pDataModel): | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::notifyChanges(const CUndoData::CChangeSet&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:819:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 819 | switch (it->type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::addRecentFile(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:952:10: warning: enumeration value ‘OMEX’ not handled in switch [-Wswitch] 952 | switch (mpDataModel->getContentType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:952:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DefaultplotDialog.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp: In member function ‘bool FunctionWidget1::loadParameterTable()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:152:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 152 | switch (params[i]->getUsage()) | ^ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/MyLineEdit.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserDialog.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserWidget.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp: In member function ‘void ReactionsWidget1::FillWidgetFromRI()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:406:35: warning: ‘QMap<K, V>::iterator QMap<K, V>::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 406 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:16: /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap<Key, T>::iterator QMap<Key, T>::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:421:35: warning: ‘QMap<K, V>::iterator QMap<K, V>::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 421 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap<Key, T>::iterator QMap<Key, T>::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensWidgetComboBox.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:55: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:66: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:861:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp: In member function ‘std::vector<CSlider*>* SliderDialog::getCSlidersForObject(CDataObject*, std::vector<CSlider*>*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:1087:8: warning: variable ‘issueWarning’ set but not used [-Wunused-but-set-variable] 1087 | bool issueWarning = false; | ^~~~~~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderSettingsDialog.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h: In constructor ‘StateSubwidget::StateSubwidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:46:12: warning: ‘StateSubwidget::mpModel’ will be initialized after [-Wreorder] 46 | CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:45:28: warning: ‘const CSteadyStateTask* StateSubwidget::mpTask’ [-Wreorder] 45 | const CSteadyStateTask * mpTask; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:53:1: warning: when initialized here [-Wreorder] 53 | StateSubwidget::StateSubwidget(QWidget* parent, const char* name) | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiWidget.cpp In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:63: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:78: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:96: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:35: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:59: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h: In constructor ‘CopasiUI3Window::CopasiUI3Window()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h:626:8: warning: ‘CopasiUI3Window::mSBWIgnoreShutdownEvent’ will be initialized after [-Wreorder] 626 | bool mSBWIgnoreShutdownEvent; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h:459:11: warning: ‘QMenu* CopasiUI3Window::mpMenuSEDMLSupport’ [-Wreorder] 459 | QMenu * mpMenuSEDMLSupport; | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:242:1: warning: when initialized here [-Wreorder] 242 | CopasiUI3Window::CopasiUI3Window(): | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotUpdateMIRIAM()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: variable ‘success’ set but not used [-Wunused-but-set-variable] 2551 | bool success = true; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCopasiTask>’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:3856:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotCheckForUpdateFinished(bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:4195:24: warning: unused variable ‘pReject’ [-Wunused-variable] 4195 | QPushButton *pReject = Question.addButton(QMessageBox::Cancel); | ^~~~~~~ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:114: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:66: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::createWidgetFromId(const WidgetType&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 504 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findTabWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 837 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Model’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] 908 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new: In member function ‘start’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/objectdebug.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp: In member function ‘void ParameterTable::updateTable(CReactionInterface&, CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:202:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 202 | switch (ri.getUsage(i)) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘QVariant getParameterValue(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:82:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 82 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘QList<QPair<QVariant, QVariant> > getParameterValidValues(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:146:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 146 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘bool setParameterValue(CCopasiParameter*, const QVariant&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:220:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 220 | switch (pParameter->getType()) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/CQIconResource.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp: In member function ‘QVariant CQUndoDM::displayData(const QModelIndex&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:98:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | if (mpUndoStack->size() <= index.row() || | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:107:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 107 | return (index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:116:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 116 | if ((index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:153:20: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 153 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:197:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 197 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:241:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 241 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:104:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 104 | switch (static_cast< ColumnType >(index.column())) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp: In member function ‘virtual QVariant CQUndoDM::headerData(int, Qt::Orientation, int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:296:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 296 | switch (static_cast< ColumnType >(section)) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDialog.cpp In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qrc_copasi.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o -MF CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/barChart/moc_CQ3DBarsModifier.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_BezierCurve.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CArrow.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CCompartmentGraphNode.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CDataEntity.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphCurve.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphNode.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CLabel.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQAutolayoutWizard.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQCurrentValueTable.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQLayoutThread.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQPlayerControlWidget.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQSpringLayoutParameterWindow.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CSimSummaryInfo.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CVisParameters.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQCreatorDM.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 82%] Built target CopasiSE /usr/bin/gmake -f copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build.make copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/DependInfo.cmake "--color=" [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQMiriamWidget.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build.make copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 83%] Building CXX object copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -MF CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o.d -o CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/SBWTranslator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/SBWTranslator.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CMetab>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CMetab>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CCompartment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CCompartment>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReaction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CReaction>’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEvent>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelValue>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CModelParameterSet>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CUnitDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN<CType>::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CReportDefinition>’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CPlotSpecification>’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix <CType> & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix<CType>& CMatrix<CType>::operator=(const CMatrix<CType>&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix <CType> & operator = (const CMatrix <CType> & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore<double>&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQModifiedDM.cpp [ 83%] Linking CXX executable CopasiSBW cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSBW.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -rdynamic CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -o CopasiSBW ../libCOPASISE.a //usr/lib64/libSBW.so -lpthread -lz /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat -lcrossguid2 -luuid /usr/lib64/libraptor.so /usr/lib64/libsbml.so.5.19.0 -lbz2 -lz -lminizip -lxml2 /usr/lib64/libexpat.so -lflexiblas -lz [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQReferenceDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_BandedGraphWidget.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DCurveData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DPlotCurve.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CBandedGraphData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CHistoCurveData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CLinearColorMap.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_COutputHandlerPlot.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotInterface.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotSpectogram.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQAdvancedPlotSettings.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQCustomPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQDataVizPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQExtender.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQMarchingSquares.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotColors.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotEditWidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotSubwidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQSpectogramWidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQtChartsPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQwtPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CSpectorgramData.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_HistoWidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_curve2dwidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_plotwindow.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollbar.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollzoomer.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CMathMLToTeX.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CStructureParser.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_AboutDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CColorScale.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlot2YSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlotSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionWidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultSubwidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultSubwidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CProgressBar.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQAnalyticsWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidgetDM.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseDataModel.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseTreeDataModel.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPane.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPaneDM.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCheckModelWindow.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQComboDelegate.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentCopyOptions.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentDM.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentsWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCopasiApplication.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCrossSectionTaskWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDateTimeEditDelegate.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependenciesWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyDialog.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDifferentialEquations.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMListWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMNetReactionDM.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMReactionDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMResultWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMSpeciesDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CEventAssignment>’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventsWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpandModelData.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentData.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentSelection.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingItemWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResult.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResultTab1.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFluxModeDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionsWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantitiesWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantityDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLNAWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapResultWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMCAWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMathMatrixWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMatrixDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMergingData.cpp In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMessageBox.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMmlScrollView.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskResult.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMultipleSelectionDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNameSelectionDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNotes.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptPopulation.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new: In member function ‘intialize’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationResult.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOscillationTaskWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterEstimationResult.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupView.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterResultItemModel.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotsWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPreferenceDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItem.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemBar.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 92%] Built target CopasiSBW [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemText.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPushButtonDelegate.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionDM.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionsWidget.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDM.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinition.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinitionSelect.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportListItem.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportsWidget.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSBMLFileDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLFileDialog.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScrolledDependenciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSensResultWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSimpleSelectionTree.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSortFilterProxyModel.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpecieDM.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpinBoxDelegate.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSplashWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQStartValueReset.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSteadyStateResult.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultSubWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSATimeScaleWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTabWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableView.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskBtnWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskHeaderWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskMethodWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskThread.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTextDialog.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQThread.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSensWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesDM.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTrajectoryWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUndoTester.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDM.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDetail.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitsWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdateAvogadro.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdatesWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidator.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidatorUnit.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanContainerWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanItemData.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRandom.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRepeat.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetScan.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetTask.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CUpDownSubwidget.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CWindowInterface.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ChemEqValidator.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiFileDialog.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiGuiTypes.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiSlider.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DataModelGUI.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DefaultplotDialog.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_MyLineEdit.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserItem.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ScanWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensWidgetComboBox.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensitivitiesWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderSettingsDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_StateSubwidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SteadyStateWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_TaskWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiWidget.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiui3window.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_listviews.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_objectdebug.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_parametertable.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_qtUtilities.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/moc_CQIconResource.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/moc_wizard.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationControls.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationSettingsEditor.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationWindow.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiAnimation.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQConnectionGraphicsItem.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiEffect.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescription.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescriptionEdit.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQElementProperties.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLabelGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutScene.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutView.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRenderConverter.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRoundedRect.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQStyledGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQZoomableView.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 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CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDialog.cpp.o /usr/bin/ranlib libCOPASIUI.a gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Built target libCOPASIUI /usr/bin/gmake -f copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build.make copasi/CopasiUI/CMakeFiles/CopasiUI.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/CMakeFiles/CopasiUI.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build.make copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Building CXX object copasi/CopasiUI/CMakeFiles/CopasiUI.dir/main.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CopasiUI/CMakeFiles/CopasiUI.dir/main.cpp.o -MF CMakeFiles/CopasiUI.dir/main.cpp.o.d -o CMakeFiles/CopasiUI.dir/main.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunctionParameter>’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS<CFunctionParameter>’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN<CFunction>’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector<CType>::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector<CType>::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN<CType>::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string<char>]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector<CType>::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN<CType>::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string<char>]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [100%] Linking CXX executable CopasiUI cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiUI.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread CMakeFiles/CopasiUI.dir/main.cpp.o -o CopasiUI ../libCOPASIUI.a /usr/lib64/libQt5Concurrent.so.5.15.11 /usr/lib64/libQt5Network.so.5.15.11 /usr/lib64/libQt5OpenGL.so.5.15.11 /usr/lib64/libQt5PrintSupport.so.5.15.11 /usr/lib64/libQt5Svg.so.5.15.11 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Xml.so.5.15.11 /usr/lib64/libQt5DataVisualization.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so /usr/lib64/libuuid.so /usr/lib64/libraptor.so /usr/lib64/libsbml.so.5.19.0 /usr/lib64/libbz2.so /usr/lib64/libz.so -lminizip -lz /usr/lib64/libxml2.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so /usr/lib64/libqwt-qt5.so /usr/lib64/libmml.so /usr/lib64/libqcustomplot-qt5.so /usr/lib64/libGL.so /usr/lib64/libGLU.so //usr/lib64/libSBW.so /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: warning: type ‘struct CQMmlScrollView’ violates the C++ One Definition Rule [-Wodr] 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: note: a different type is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:51:16: note: the first difference of corresponding definitions is field ‘mpMmlWidget’ 51 | QtMmlWidget* mpMmlWidget; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: note: a type with different number of fields is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_del ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: ‘__dt_del ’ was previously declared here 57 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_comp ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: ‘__dt_comp ’ was previously declared here 57 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new: In member function ‘start’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/13/new: In member function ‘relocate’: /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘deallocate’, inlined from ‘deallocate’ at /usr/include/c++/13/bits/alloc_traits.h:517:23, inlined from ‘_M_deallocate’ at /usr/include/c++/13/bits/stl_vector.h:387:19, inlined from ‘__dt_base ’ at /usr/include/c++/13/bits/stl_vector.h:366:15, inlined from ‘__dt_base ’ at /usr/include/c++/13/bits/stl_vector.h:735:7, inlined from ‘fillItemFromCurve’ at /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp:418:35, inlined from ‘_Z17fillItemFromGroupP18QGraphicsItemGroupPK13CLBoundingBoxPK7CLGroupPK16CLRenderResolver.part.0’ at /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp:1043:28: /usr/include/c++/13/bits/new_allocator.h:172: warning: ‘operator delete’ called on pointer ‘D.24353.D.8420._M_impl.D.8414._M_finish’ with nonzero offset 64 [-Wfree-nonheap-object] 172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n)); | /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Built target CopasiUI gmake[1]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-Build-284/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.CETqCZ + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64 ++ dirname /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + DESTDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64 + /usr/bin/cmake --install . -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/_COPASI.so -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi.pth -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/COPASI.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/add_optitems.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/checkModel.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/custom_output.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/example1.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/example2.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/example3.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/example4.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/example5.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/example6.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/example7.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/example8.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/example9.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/get_steady_state.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/print_model_parameterset.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/process_callback.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/remove_reaction.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/remove_unused_elements.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/restore_names.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/run_mca.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/setup_sensitivities.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/to_local_parameters.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples/write_ids_to_names.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/bin/CopasiSE -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/bin/CopasiUI -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/bin/CopasiSBW -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/TutWiz-Step1.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/TutWiz-Step2.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/TutWiz-Step3.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/TutWiz-Step4.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/TutWiz-Step5.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/TutWiz-Step6.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/ModelSettingsDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/NewPlotAdded.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/ObjectBrowserSelection.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/ObjectBrowserTree.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/OutputAssistant.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/PlotCurveSelectionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/PlotDefinition.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/PlotWindow.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/ReactionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/ReactionOverview.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/ReactionOverviewEmpty.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/ReportDefinitionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/doc/html/figures/TimeCourseDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/CircadianClock.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/DimericMWC-stiff.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/Genetic-2000Elo.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/MAPK-HF96-layout.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/Metabolism-2000Poo.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/NF-kappaB-model.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/NF-kappaB.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/NF-kappaB.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/Olsen2003_peroxidase.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/YeastGlycolysis.gps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/brusselator-model.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/brusselator.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/brusselator.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/oscli.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/examples/scan.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/icons/copasi/icons/Copasi.ico -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/icons/copasi/icons/CopasiDoc.ico -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/copasi/config/MIRIAMResources.xml + rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12/site-packages/copasi/examples + install -pm 644 copasi/UI/icons/Copasi48-Alpha.xpm /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/icons/copasi/icons + mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/applications + cat + mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/metainfo + install -pm 644 /builddir/build/SOURCES/COPASI.appdata.xml /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/metainfo/ + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 4.42.284-5.fc39 --unique-debug-suffix -4.42.284-5.fc39.x86_64 --unique-debug-src-base COPASI-4.42.284-5.fc39.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/COPASI-Build-284 find-debuginfo: starting Extracting debug info from 4 files DWARF-compressing 4 files sepdebugcrcfix: Updated 4 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/COPASI-4.42.284-5.fc39.x86_64 cpio: copasi/CChemEqParser.ypp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser.ypp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser.ypp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_yacc.cpp: Cannot stat: No such file or directory 61495 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/COPASI-4.42.284-5.fc39.x86_64/copasi/odepack++/CRadau5.h is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib/debug/usr/lib64/python3.12 using python3.12 Bytecompiling .py files below /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/lib64/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.y71tvH + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + desktop-file-validate /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/applications/COPASI.desktop + appstream-util validate-relax --nonet /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/metainfo/COPASI.appdata.xml /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/metainfo/COPASI.appdata.xml: OK + RPM_EC=0 ++ jobs -p + exit 0 Processing files: COPASI-4.42.284-5.fc39.x86_64 Provides: COPASI = 4.42.284-5.fc39 COPASI(x86-64) = 4.42.284-5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Obsoletes: COPASI-sharp < 0:4.25.213-1 R-COPASI < 0:4.25.213-1 perl-COPASI < 0:4.25.213-1 Processing files: COPASI-gui-4.42.284-5.fc39.x86_64 Provides: COPASI-gui = 4.42.284-5.fc39 COPASI-gui(x86-64) = 4.42.284-5.fc39 application() application(COPASI.desktop) metainfo() metainfo(COPASI.appdata.xml) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libCombine.so.0()(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5Core.so.5(Qt_5.15)(64bit) libQt5DataVisualization.so.5()(64bit) libQt5DataVisualization.so.5(Qt_5)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5PrintSupport.so.5()(64bit) libQt5PrintSupport.so.5(Qt_5)(64bit) libQt5Svg.so.5()(64bit) libQt5Svg.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libQt5Xml.so.5()(64bit) libQt5Xml.so.5(Qt_5)(64bit) libSBW.so.2.12()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmml.so.2()(64bit) libqcustomplot-qt5.so.2()(64bit) libqwt-qt5.so.6.2()(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: COPASI-data-4.42.284-5.fc39.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.fHDuet + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-data = 4.42.284-5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-COPASI-4.42.284-5.fc39.x86_64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.3ZhQHl + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-COPASI = 4.42.284-5.fc39 python3-COPASI = 4.42.284-5.fc39 python3-COPASI(x86-64) = 4.42.284-5.fc39 python3.12-COPASI = 4.42.284-5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libpython3.12.so.1.0()(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 rtld(GNU_HASH) Obsoletes: python-COPASI < 4.42.284-5.fc39 python2-COPASI < 0:4.25.213-1 Processing files: COPASI-doc-4.42.284-5.fc39.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.0zrmpY + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-doc = 4.42.284-5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debugsource-4.42.284-5.fc39.x86_64 Provides: COPASI-debugsource = 4.42.284-5.fc39 COPASI-debugsource(x86-64) = 4.42.284-5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debuginfo-4.42.284-5.fc39.x86_64 Provides: COPASI-debuginfo = 4.42.284-5.fc39 COPASI-debuginfo(x86-64) = 4.42.284-5.fc39 debuginfo(build-id) = cb5491168aea23c7941df1d7d0bcf474810c60d9 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(x86-64) = 4.42.284-5.fc39 Processing files: COPASI-gui-debuginfo-4.42.284-5.fc39.x86_64 Provides: COPASI-gui-debuginfo = 4.42.284-5.fc39 COPASI-gui-debuginfo(x86-64) = 4.42.284-5.fc39 debuginfo(build-id) = 5f5aab352fd09f790ae527e5048222dce222e050 debuginfo(build-id) = cb78b1d07b85fa4b50f5442493b636f50d363bb5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(x86-64) = 4.42.284-5.fc39 Processing files: python3-COPASI-debuginfo-4.42.284-5.fc39.x86_64 Provides: debuginfo(build-id) = 2c3e8b3331365660ec6e4de31f911d6c6867ae52 python-COPASI-debuginfo = 4.42.284-5.fc39 python3-COPASI-debuginfo = 4.42.284-5.fc39 python3-COPASI-debuginfo(x86-64) = 4.42.284-5.fc39 python3.12-COPASI-debuginfo = 4.42.284-5.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(x86-64) = 4.42.284-5.fc39 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64 Wrote: /builddir/build/RPMS/python3-COPASI-debuginfo-4.42.284-5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-gui-debuginfo-4.42.284-5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-debuginfo-4.42.284-5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-gui-4.42.284-5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-debugsource-4.42.284-5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-4.42.284-5.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-data-4.42.284-5.fc39.noarch.rpm Wrote: /builddir/build/RPMS/COPASI-doc-4.42.284-5.fc39.noarch.rpm Wrote: /builddir/build/RPMS/python3-COPASI-4.42.284-5.fc39.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.Gs9FBb + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + /usr/bin/rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc39.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.pTUtL9 + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + rm -rf COPASI-Build-284 COPASI-Build-284.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild COPASI-4.42.284-5.fc39.src.rpm Finish: build phase for COPASI-4.42.284-5.fc39.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1705956480.846328/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1705956480.846328/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1705956480.846328/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/COPASI-4.42.284-5.fc39.src.rpm) Config(child) 32 minutes 18 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "COPASI", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "src" }, { "name": "COPASI-gui-debuginfo", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "x86_64" }, { "name": "COPASI-doc", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "noarch" }, { "name": "python3-COPASI", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "x86_64" }, { "name": "COPASI-data", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "noarch" }, { "name": "COPASI", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "x86_64" }, { "name": "COPASI-debugsource", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "x86_64" }, { "name": "COPASI-debuginfo", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "x86_64" }, { "name": "COPASI-gui", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "x86_64" }, { "name": "python3-COPASI-debuginfo", "epoch": null, "version": "4.42.284", "release": "5.fc39", "arch": "x86_64" } ] } RPMResults finished