Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c11a' (ED25519) to the list of known hosts.
You can reproduce this build on your computer by running:
sudo dnf install copr-rpmbuild
/usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8133123-fedora-41-x86_64 --chroot fedora-41-x86_64
Version: 1.0
PID: 7976
Logging PID: 7977
Task:
{'allow_user_ssh': False,
'appstream': False,
'background': True,
'build_id': 8133123,
'buildroot_pkgs': [],
'chroot': 'fedora-41-x86_64',
'enable_net': False,
'fedora_review': False,
'git_hash': 'a5294c0378c9ffcf21d0efea2317aa722c99a471',
'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/snakemake',
'isolation': 'default',
'memory_reqs': 2048,
'package_name': 'snakemake',
'package_version': '8.18.2-4',
'project_dirname': 'automatic-obsoletes',
'project_name': 'automatic-obsoletes',
'project_owner': 'torsava',
'repo_priority': None,
'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/torsava/automatic-obsoletes/fedora-41-x86_64/',
'id': 'copr_base',
'name': 'Copr repository',
'priority': None}],
'sandbox': 'torsava/automatic-obsoletes--https://src.fedoraproject.org/user/music',
'source_json': {},
'source_type': None,
'ssh_public_keys': None,
'storage': None,
'submitter': 'https://src.fedoraproject.org/user/music',
'tags': [],
'task_id': '8133123-fedora-41-x86_64',
'timeout': 18000,
'uses_devel_repo': False,
'with_opts': [],
'without_opts': []}
Running: git clone https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/snakemake /var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake --depth 500 --no-single-branch --recursive
cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/snakemake', '/var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout:
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake'...
Running: git checkout a5294c0378c9ffcf21d0efea2317aa722c99a471 --
cmd: ['git', 'checkout', 'a5294c0378c9ffcf21d0efea2317aa722c99a471', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake
rc: 0
stdout:
stderr: Note: switching to 'a5294c0378c9ffcf21d0efea2317aa722c99a471'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:
git switch -c <new-branch-name>
Or undo this operation with:
git switch -
Turn off this advice by setting config variable advice.detachedHead to false
HEAD is now at a5294c0 automatic import of snakemake
Running: dist-git-client sources
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
cmd: ['dist-git-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake
rc: 0
stdout:
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading snakemake-8.18.2.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o snakemake-8.18.2.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/torsava/automatic-obsoletes/snakemake/snakemake-8.18.2.tar.gz/md5/3d16041877d242096026870afc84978e/snakemake-8.18.2.tar.gz
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 8464k 100 8464k 0 0 1308k 0 0:00:06 0:00:06 --:--:-- 1266k
INFO: Reading stdout from command: md5sum snakemake-8.18.2.tar.gz
Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728851955.517208 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728851955.517208 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake/snakemake.spec) Config(fedora-41-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.9
INFO: Mock Version: 5.9
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1728851955.517208/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using bootstrap image: registry.fedoraproject.org/fedora:41
INFO: Pulling image: registry.fedoraproject.org/fedora:41
INFO: Copy content of container registry.fedoraproject.org/fedora:41 to /var/lib/mock/fedora-41-x86_64-bootstrap-1728851955.517208/root
INFO: Checking that registry.fedoraproject.org/fedora:41 image matches host's architecture
INFO: mounting registry.fedoraproject.org/fedora:41 with podman image mount
INFO: image registry.fedoraproject.org/fedora:41 as /var/lib/containers/storage/overlay/d23cc7422023e69d73434f3f4e31ddb77e4eb85832953b01904f7d75f6d8fcb5/merged
INFO: umounting image registry.fedoraproject.org/fedora:41 (/var/lib/containers/storage/overlay/d23cc7422023e69d73434f3f4e31ddb77e4eb85832953b01904f7d75f6d8fcb5/merged) with podman image umount
INFO: Package manager dnf5 detected and used (fallback)
INFO: Not updating bootstrap chroot, bootstrap_image_ready=True
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1728851955.517208/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (direct choice)
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
rpm-4.19.94-1.fc41.x86_64
rpm-sequoia-1.7.0-2.fc41.x86_64
dnf5-5.2.6.2-1.fc41.x86_64
dnf5-plugins-5.2.6.2-1.fc41.x86_64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
updates 100% | 152.7 KiB/s | 31.8 KiB | 00m00s
fedora 100% | 18.4 MiB/s | 35.4 MiB | 00m02s
Copr repository 100% | 20.4 MiB/s | 3.9 MiB | 00m00s
Repositories loaded.
Package Arch Version Repository Size
Installing group/module packages:
bash x86_64 5.2.32-1.fc41 fedora 8.2 MiB
bzip2 x86_64 1.0.8-19.fc41 fedora 95.7 KiB
coreutils x86_64 9.5-10.fc41 fedora 5.6 MiB
cpio x86_64 2.15-2.fc41 fedora 1.1 MiB
diffutils x86_64 3.10-8.fc41 fedora 1.6 MiB
fedora-release-common noarch 41-0.21 fedora 19.4 KiB
findutils x86_64 1:4.10.0-4.fc41 fedora 1.8 MiB
gawk x86_64 5.3.0-4.fc41 fedora 1.7 MiB
glibc-minimal-langpack x86_64 2.40-3.fc41 fedora 0.0 B
grep x86_64 3.11-9.fc41 fedora 1.0 MiB
gzip x86_64 1.13-2.fc41 fedora 389.0 KiB
info x86_64 7.1-3.fc41 fedora 361.8 KiB
patch x86_64 2.7.6-25.fc41 fedora 266.7 KiB
redhat-rpm-config noarch 293-1.fc41 fedora 183.5 KiB
rpm-build x86_64 4.20.0-1.fc41 copr_base 194.3 KiB
sed x86_64 4.9-3.fc41 fedora 861.5 KiB
shadow-utils x86_64 2:4.15.1-12.fc41 fedora 4.1 MiB
tar x86_64 2:1.35-4.fc41 fedora 2.9 MiB
unzip x86_64 6.0-64.fc41 fedora 386.8 KiB
util-linux x86_64 2.40.2-8.fc41 copr_base 3.6 MiB
which x86_64 2.21-42.fc41 fedora 80.2 KiB
xz x86_64 1:5.6.2-2.fc41 fedora 1.2 MiB
Installing dependencies:
add-determinism x86_64 0.3.6-1.fc41 fedora 2.2 MiB
alternatives x86_64 1.30-1.fc41 fedora 66.3 KiB
ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB
audit-libs x86_64 4.0.2-1.fc41 copr_base 331.3 KiB
authselect x86_64 1.5.0-8.fc41 fedora 157.6 KiB
authselect-libs x86_64 1.5.0-8.fc41 fedora 822.2 KiB
basesystem noarch 11-21.fc41 fedora 0.0 B
binutils x86_64 2.43.1-2.fc41 fedora 27.5 MiB
build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 fedora 735.0 B
bzip2-libs x86_64 1.0.8-19.fc41 fedora 80.7 KiB
ca-certificates noarch 2024.2.69_v8.0.401-1.0.fc41 fedora 2.4 MiB
coreutils-common x86_64 9.5-10.fc41 fedora 11.2 MiB
cracklib x86_64 2.9.11-6.fc41 fedora 238.9 KiB
crypto-policies noarch 20240826-1.gite824389.fc41 fedora 136.9 KiB
curl x86_64 8.9.1-2.fc41 fedora 796.2 KiB
cyrus-sasl-lib x86_64 2.1.28-27.fc41 fedora 2.3 MiB
debugedit x86_64 5.0-17.fc41 fedora 199.3 KiB
dwz x86_64 0.15-8.fc41 fedora 298.9 KiB
ed x86_64 1.20.2-2.fc41 fedora 146.9 KiB
efi-srpm-macros noarch 5-12.fc41 fedora 40.1 KiB
elfutils x86_64 0.191-8.fc41 fedora 2.6 MiB
elfutils-debuginfod-client x86_64 0.191-8.fc41 fedora 64.9 KiB
elfutils-default-yama-scope noarch 0.191-8.fc41 fedora 1.8 KiB
elfutils-libelf x86_64 0.191-8.fc41 fedora 1.2 MiB
elfutils-libs x86_64 0.191-8.fc41 fedora 646.2 KiB
fedora-gpg-keys noarch 41-0.5 fedora 126.4 KiB
fedora-release noarch 41-0.21 fedora 0.0 B
fedora-release-identity-basic noarch 41-0.21 fedora 684.0 B
fedora-repos noarch 41-0.5 fedora 4.9 KiB
file x86_64 5.45-7.fc41 fedora 103.5 KiB
file-libs x86_64 5.45-7.fc41 fedora 9.9 MiB
filesystem x86_64 3.18-23.fc41 fedora 106.0 B
fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB
forge-srpm-macros noarch 0.3.2-1.fc41 fedora 39.0 KiB
fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B
gdb-minimal x86_64 15.1-1.fc41 fedora 13.0 MiB
gdbm x86_64 1:1.23-7.fc41 fedora 460.9 KiB
gdbm-libs x86_64 1:1.23-7.fc41 fedora 121.9 KiB
ghc-srpm-macros noarch 1.9.1-2.fc41 fedora 747.0 B
glibc x86_64 2.40-3.fc41 fedora 6.7 MiB
glibc-common x86_64 2.40-3.fc41 fedora 1.0 MiB
glibc-gconv-extra x86_64 2.40-3.fc41 fedora 8.0 MiB
gmp x86_64 1:6.3.0-2.fc41 fedora 811.4 KiB
gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB
go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB
jansson x86_64 2.13.1-10.fc41 fedora 88.3 KiB
kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB
keyutils-libs x86_64 1.6.3-4.fc41 fedora 54.4 KiB
krb5-libs x86_64 1.21.3-2.fc41 fedora 2.3 MiB
libacl x86_64 2.3.2-2.fc41 fedora 40.0 KiB
libarchive x86_64 3.7.4-3.fc41 fedora 922.6 KiB
libattr x86_64 2.5.2-4.fc41 fedora 28.5 KiB
libblkid x86_64 2.40.2-8.fc41 copr_base 262.5 KiB
libbrotli x86_64 1.1.0-5.fc41 fedora 837.6 KiB
libcap x86_64 2.70-4.fc41 fedora 220.2 KiB
libcap-ng x86_64 0.8.5-3.fc41 fedora 69.2 KiB
libcom_err x86_64 1.47.1-3.fc41 fedora 67.2 KiB
libcurl x86_64 8.9.1-2.fc41 fedora 818.1 KiB
libeconf x86_64 0.6.2-3.fc41 fedora 58.0 KiB
libevent x86_64 2.1.12-14.fc41 fedora 895.7 KiB
libfdisk x86_64 2.40.2-8.fc41 copr_base 362.9 KiB
libffi x86_64 3.4.6-3.fc41 fedora 86.4 KiB
libgcc x86_64 14.2.1-3.fc41 fedora 274.6 KiB
libgomp x86_64 14.2.1-3.fc41 fedora 523.5 KiB
libidn2 x86_64 2.3.7-2.fc41 fedora 329.1 KiB
libmount x86_64 2.40.2-8.fc41 copr_base 351.8 KiB
libnghttp2 x86_64 1.62.1-2.fc41 fedora 166.1 KiB
libnsl2 x86_64 2.0.1-2.fc41 fedora 57.9 KiB
libpkgconf x86_64 2.3.0-1.fc41 fedora 78.2 KiB
libpsl x86_64 0.21.5-4.fc41 fedora 80.5 KiB
libpwquality x86_64 1.4.5-11.fc41 fedora 417.8 KiB
libselinux x86_64 3.7-6.fc41 copr_base 181.0 KiB
libsemanage x86_64 3.7-3.fc41 copr_base 293.5 KiB
libsepol x86_64 3.7-2.fc41 fedora 817.8 KiB
libsmartcols x86_64 2.40.2-8.fc41 copr_base 180.4 KiB
libssh x86_64 0.10.6-8.fc41 fedora 513.3 KiB
libssh-config noarch 0.10.6-8.fc41 fedora 277.0 B
libstdc++ x86_64 14.2.1-3.fc41 fedora 2.8 MiB
libtasn1 x86_64 4.19.0-9.fc41 fedora 175.7 KiB
libtirpc x86_64 1.3.5-0.fc41 fedora 202.7 KiB
libtool-ltdl x86_64 2.4.7-12.fc41 fedora 66.2 KiB
libunistring x86_64 1.1-8.fc41 fedora 1.7 MiB
libuuid x86_64 2.40.2-8.fc41 copr_base 41.4 KiB
libverto x86_64 0.3.2-9.fc41 fedora 29.5 KiB
libxcrypt x86_64 4.4.36-7.fc41 fedora 266.8 KiB
libxml2 x86_64 2.12.8-2.fc41 fedora 1.7 MiB
libzstd x86_64 1.5.6-2.fc41 fedora 795.9 KiB
lua-libs x86_64 5.4.6-6.fc41 fedora 285.0 KiB
lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB
lz4-libs x86_64 1.10.0-1.fc41 fedora 145.5 KiB
mpfr x86_64 4.2.1-5.fc41 fedora 832.1 KiB
ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB
ncurses-libs x86_64 6.5-2.20240629.fc41 fedora 975.2 KiB
ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB
openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B
openldap x86_64 2.6.8-5.fc41 fedora 644.2 KiB
openssl-libs x86_64 1:3.2.2-9.fc41 fedora 7.8 MiB
p11-kit x86_64 0.25.5-3.fc41 fedora 2.2 MiB
p11-kit-trust x86_64 0.25.5-3.fc41 fedora 391.4 KiB
package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB
pam x86_64 1.6.1-5.fc41 fedora 1.8 MiB
pam-libs x86_64 1.6.1-5.fc41 fedora 139.0 KiB
pcre2 x86_64 10.44-1.fc41.1 fedora 653.5 KiB
pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB
perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B
pkgconf x86_64 2.3.0-1.fc41 fedora 88.6 KiB
pkgconf-m4 noarch 2.3.0-1.fc41 fedora 14.4 KiB
pkgconf-pkg-config x86_64 2.3.0-1.fc41 fedora 989.0 B
popt x86_64 1.19-7.fc41 fedora 136.9 KiB
publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB
pyproject-srpm-macros noarch 1.15.1-1.fc41 fedora 1.9 KiB
python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB
qt5-srpm-macros noarch 5.15.15-1.fc41 fedora 500.0 B
qt6-srpm-macros noarch 6.7.2-3.fc41 fedora 456.0 B
readline x86_64 8.2-10.fc41 fedora 493.2 KiB
rpm x86_64 4.20.0-1.fc41 copr_base 3.1 MiB
rpm-build-libs x86_64 4.20.0-1.fc41 copr_base 206.7 KiB
rpm-libs x86_64 4.20.0-1.fc41 copr_base 725.9 KiB
rpm-sequoia x86_64 1.7.0-2.fc41 fedora 2.4 MiB
rust-srpm-macros noarch 26.3-3.fc41 copr_base 4.8 KiB
setup noarch 2.15.0-5.fc41 fedora 720.7 KiB
sqlite-libs x86_64 3.46.1-1.fc41 fedora 1.4 MiB
systemd-libs x86_64 256.7-1.fc41 fedora 2.0 MiB
util-linux-core x86_64 2.40.2-8.fc41 copr_base 1.5 MiB
xxhash-libs x86_64 0.8.2-4.fc41 fedora 88.4 KiB
xz-libs x86_64 1:5.6.2-2.fc41 fedora 214.4 KiB
zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB
zip x86_64 3.0-41.fc41 fedora 703.2 KiB
zlib-ng-compat x86_64 2.1.7-3.fc41 fedora 134.0 KiB
zstd x86_64 1.5.6-2.fc41 fedora 1.7 MiB
Installing groups:
Buildsystem building group
Transaction Summary:
Installing: 152 packages
Total size of inbound packages is 53 MiB. Need to download 53 MiB.
After this operation, 180 MiB extra will be used (install 180 MiB, remove 0 B).
[ 1/152] bzip2-0:1.0.8-19.fc41.x86_64 100% | 1.8 MiB/s | 52.5 KiB | 00m00s
[ 2/152] cpio-0:2.15-2.fc41.x86_64 100% | 6.5 MiB/s | 291.8 KiB | 00m00s
[ 3/152] coreutils-0:9.5-10.fc41.x86_6 100% | 13.6 MiB/s | 1.1 MiB | 00m00s
[ 4/152] diffutils-0:3.10-8.fc41.x86_6 100% | 24.7 MiB/s | 405.4 KiB | 00m00s
[ 5/152] fedora-release-common-0:41-0. 100% | 2.0 MiB/s | 22.8 KiB | 00m00s
[ 6/152] bash-0:5.2.32-1.fc41.x86_64 100% | 18.4 MiB/s | 1.8 MiB | 00m00s
[ 7/152] glibc-minimal-langpack-0:2.40 100% | 7.6 MiB/s | 124.0 KiB | 00m00s
[ 8/152] grep-0:3.11-9.fc41.x86_64 100% | 13.9 MiB/s | 299.7 KiB | 00m00s
[ 9/152] findutils-1:4.10.0-4.fc41.x86 100% | 16.2 MiB/s | 548.5 KiB | 00m00s
[ 10/152] info-0:7.1-3.fc41.x86_64 100% | 17.8 MiB/s | 182.5 KiB | 00m00s
[ 11/152] patch-0:2.7.6-25.fc41.x86_64 100% | 10.7 MiB/s | 131.0 KiB | 00m00s
[ 12/152] redhat-rpm-config-0:293-1.fc4 100% | 8.0 MiB/s | 82.0 KiB | 00m00s
[ 13/152] gzip-0:1.13-2.fc41.x86_64 100% | 5.2 MiB/s | 170.2 KiB | 00m00s
[ 14/152] sed-0:4.9-3.fc41.x86_64 100% | 23.9 MiB/s | 317.7 KiB | 00m00s
[ 15/152] unzip-0:6.0-64.fc41.x86_64 100% | 6.2 MiB/s | 184.9 KiB | 00m00s
[ 16/152] which-0:2.21-42.fc41.x86_64 100% | 1.8 MiB/s | 41.6 KiB | 00m00s
[ 17/152] tar-2:1.35-4.fc41.x86_64 100% | 10.0 MiB/s | 860.7 KiB | 00m00s
[ 18/152] shadow-utils-2:4.15.1-12.fc41 100% | 11.5 MiB/s | 1.3 MiB | 00m00s
[ 19/152] xz-1:5.6.2-2.fc41.x86_64 100% | 8.4 MiB/s | 471.5 KiB | 00m00s
[ 20/152] rpm-build-0:4.20.0-1.fc41.x86 100% | 1.7 MiB/s | 75.8 KiB | 00m00s
[ 21/152] gawk-0:5.3.0-4.fc41.x86_64 100% | 13.4 MiB/s | 1.1 MiB | 00m00s
[ 22/152] util-linux-0:2.40.2-8.fc41.x8 100% | 14.5 MiB/s | 1.1 MiB | 00m00s
[ 23/152] filesystem-0:3.18-23.fc41.x86 100% | 18.4 MiB/s | 1.1 MiB | 00m00s
[ 24/152] bzip2-libs-0:1.0.8-19.fc41.x8 100% | 2.4 MiB/s | 41.1 KiB | 00m00s
[ 25/152] ncurses-libs-0:6.5-2.20240629 100% | 8.4 MiB/s | 334.0 KiB | 00m00s
[ 26/152] gmp-1:6.3.0-2.fc41.x86_64 100% | 12.4 MiB/s | 318.0 KiB | 00m00s
[ 27/152] glibc-0:2.40-3.fc41.x86_64 100% | 21.1 MiB/s | 2.2 MiB | 00m00s
[ 28/152] libacl-0:2.3.2-2.fc41.x86_64 100% | 2.2 MiB/s | 24.5 KiB | 00m00s
[ 29/152] libattr-0:2.5.2-4.fc41.x86_64 100% | 2.5 MiB/s | 18.2 KiB | 00m00s
[ 30/152] libcap-0:2.70-4.fc41.x86_64 100% | 6.5 MiB/s | 86.7 KiB | 00m00s
[ 31/152] fedora-repos-0:41-0.5.noarch 100% | 1.0 MiB/s | 9.2 KiB | 00m00s
[ 32/152] glibc-common-0:2.40-3.fc41.x8 100% | 15.5 MiB/s | 412.3 KiB | 00m00s
[ 33/152] coreutils-common-0:9.5-10.fc4 100% | 20.6 MiB/s | 2.1 MiB | 00m00s
[ 34/152] pcre2-0:10.44-1.fc41.1.x86_64 100% | 11.3 MiB/s | 243.1 KiB | 00m00s
[ 35/152] ed-0:1.20.2-2.fc41.x86_64 100% | 5.3 MiB/s | 81.8 KiB | 00m00s
[ 36/152] build-reproducibility-srpm-ma 100% | 706.9 KiB/s | 10.6 KiB | 00m00s
[ 37/152] ansible-srpm-macros-0:1-16.fc 100% | 741.9 KiB/s | 20.8 KiB | 00m00s
[ 38/152] dwz-0:0.15-8.fc41.x86_64 100% | 9.0 MiB/s | 138.9 KiB | 00m00s
[ 39/152] openssl-libs-1:3.2.2-9.fc41.x 100% | 20.3 MiB/s | 2.3 MiB | 00m00s
[ 40/152] fonts-srpm-macros-1:2.0.5-17. 100% | 3.3 MiB/s | 27.0 KiB | 00m00s
[ 41/152] forge-srpm-macros-0:0.3.2-1.f 100% | 19.2 MiB/s | 19.7 KiB | 00m00s
[ 42/152] fpc-srpm-macros-0:1.3-13.fc41 100% | 884.7 KiB/s | 8.0 KiB | 00m00s
[ 43/152] efi-srpm-macros-0:5-12.fc41.n 100% | 771.6 KiB/s | 22.4 KiB | 00m00s
[ 44/152] ghc-srpm-macros-0:1.9.1-2.fc4 100% | 532.7 KiB/s | 9.1 KiB | 00m00s
[ 45/152] go-srpm-macros-0:3.6.0-3.fc41 100% | 1.7 MiB/s | 28.0 KiB | 00m00s
[ 46/152] gnat-srpm-macros-0:6-6.fc41.n 100% | 526.6 KiB/s | 9.0 KiB | 00m00s
[ 47/152] kernel-srpm-macros-0:1.0-24.f 100% | 1.2 MiB/s | 9.9 KiB | 00m00s
[ 48/152] ocaml-srpm-macros-0:10-3.fc41 100% | 657.1 KiB/s | 9.2 KiB | 00m00s
[ 49/152] openblas-srpm-macros-0:2-18.f 100% | 551.1 KiB/s | 7.7 KiB | 00m00s
[ 50/152] lua-srpm-macros-0:1-14.fc41.n 100% | 493.3 KiB/s | 8.9 KiB | 00m00s
[ 51/152] perl-srpm-macros-0:1-56.fc41. 100% | 1.2 MiB/s | 8.5 KiB | 00m00s
[ 52/152] pyproject-srpm-macros-0:1.15. 100% | 1.1 MiB/s | 13.3 KiB | 00m00s
[ 53/152] python-srpm-macros-0:3.13-3.f 100% | 2.3 MiB/s | 23.7 KiB | 00m00s
[ 54/152] package-notes-srpm-macros-0:0 100% | 427.4 KiB/s | 9.8 KiB | 00m00s
[ 55/152] qt5-srpm-macros-0:5.15.15-1.f 100% | 1.1 MiB/s | 8.9 KiB | 00m00s
[ 56/152] qt6-srpm-macros-0:6.7.2-3.fc4 100% | 1.1 MiB/s | 9.1 KiB | 00m00s
[ 57/152] zig-srpm-macros-0:1-3.fc41.no 100% | 902.6 KiB/s | 8.1 KiB | 00m00s
[ 58/152] libeconf-0:0.6.2-3.fc41.x86_6 100% | 3.5 MiB/s | 32.2 KiB | 00m00s
[ 59/152] libxcrypt-0:4.4.36-7.fc41.x86 100% | 11.6 MiB/s | 118.5 KiB | 00m00s
[ 60/152] pam-libs-0:1.6.1-5.fc41.x86_6 100% | 7.0 MiB/s | 57.3 KiB | 00m00s
[ 61/152] zip-0:3.0-41.fc41.x86_64 100% | 7.8 MiB/s | 264.8 KiB | 00m00s
[ 62/152] xz-libs-1:5.6.2-2.fc41.x86_64 100% | 8.4 MiB/s | 111.8 KiB | 00m00s
[ 63/152] setup-0:2.15.0-5.fc41.noarch 100% | 7.2 MiB/s | 154.4 KiB | 00m00s
[ 64/152] readline-0:8.2-10.fc41.x86_64 100% | 14.9 MiB/s | 213.2 KiB | 00m00s
[ 65/152] debugedit-0:5.0-17.fc41.x86_6 100% | 7.8 MiB/s | 80.1 KiB | 00m00s
[ 66/152] mpfr-0:4.2.1-5.fc41.x86_64 100% | 15.4 MiB/s | 346.3 KiB | 00m00s
[ 67/152] elfutils-libelf-0:0.191-8.fc4 100% | 20.3 MiB/s | 207.6 KiB | 00m00s
[ 68/152] elfutils-0:0.191-8.fc41.x86_6 100% | 20.7 MiB/s | 529.4 KiB | 00m00s
[ 69/152] popt-0:1.19-7.fc41.x86_64 100% | 4.0 MiB/s | 65.9 KiB | 00m00s
[ 70/152] libarchive-0:3.7.4-3.fc41.x86 100% | 16.0 MiB/s | 409.2 KiB | 00m00s
[ 71/152] zstd-0:1.5.6-2.fc41.x86_64 100% | 14.2 MiB/s | 481.5 KiB | 00m00s
[ 72/152] systemd-libs-0:256.7-1.fc41.x 100% | 21.6 MiB/s | 731.4 KiB | 00m00s
[ 73/152] zlib-ng-compat-0:2.1.7-3.fc41 100% | 8.4 MiB/s | 77.7 KiB | 00m00s
[ 74/152] libblkid-0:2.40.2-8.fc41.x86_ 100% | 7.2 MiB/s | 125.5 KiB | 00m00s
[ 75/152] libfdisk-0:2.40.2-8.fc41.x86_ 100% | 6.8 MiB/s | 159.9 KiB | 00m00s
[ 76/152] libmount-0:2.40.2-8.fc41.x86_ 100% | 9.5 MiB/s | 156.2 KiB | 00m00s
[ 77/152] libsmartcols-0:2.40.2-8.fc41. 100% | 7.5 MiB/s | 84.4 KiB | 00m00s
[ 78/152] libuuid-0:2.40.2-8.fc41.x86_6 100% | 3.2 MiB/s | 29.5 KiB | 00m00s
[ 79/152] util-linux-core-0:2.40.2-8.fc 100% | 22.1 MiB/s | 521.5 KiB | 00m00s
[ 80/152] basesystem-0:11-21.fc41.noarc 100% | 273.0 KiB/s | 7.4 KiB | 00m00s
[ 81/152] glibc-gconv-extra-0:2.40-3.fc 100% | 28.2 MiB/s | 1.7 MiB | 00m00s
[ 82/152] libgcc-0:14.2.1-3.fc41.x86_64 100% | 9.3 MiB/s | 133.3 KiB | 00m00s
[ 83/152] rpm-0:4.20.0-1.fc41.x86_64 100% | 3.5 MiB/s | 519.8 KiB | 00m00s
[ 84/152] ncurses-base-0:6.5-2.20240629 100% | 14.4 MiB/s | 88.3 KiB | 00m00s
[ 85/152] crypto-policies-0:20240826-1. 100% | 10.3 MiB/s | 94.5 KiB | 00m00s
[ 86/152] fedora-gpg-keys-0:41-0.5.noar 100% | 7.2 MiB/s | 133.6 KiB | 00m00s
[ 87/152] pcre2-syntax-0:10.44-1.fc41.1 100% | 8.6 MiB/s | 149.9 KiB | 00m00s
[ 88/152] ca-certificates-0:2024.2.69_v 100% | 25.8 MiB/s | 871.2 KiB | 00m00s
[ 89/152] elfutils-debuginfod-client-0: 100% | 3.6 MiB/s | 37.2 KiB | 00m00s
[ 90/152] add-determinism-0:0.3.6-1.fc4 100% | 23.1 MiB/s | 851.8 KiB | 00m00s
[ 91/152] elfutils-libs-0:0.191-8.fc41. 100% | 6.0 MiB/s | 257.5 KiB | 00m00s
[ 92/152] libstdc++-0:14.2.1-3.fc41.x86 100% | 27.1 MiB/s | 887.8 KiB | 00m00s
[ 93/152] libzstd-0:1.5.6-2.fc41.x86_64 100% | 18.9 MiB/s | 310.3 KiB | 00m00s
[ 94/152] lz4-libs-0:1.10.0-1.fc41.x86_ 100% | 7.7 MiB/s | 70.7 KiB | 00m00s
[ 95/152] curl-0:8.9.1-2.fc41.x86_64 100% | 25.6 MiB/s | 315.1 KiB | 00m00s
[ 96/152] elfutils-default-yama-scope-0 100% | 1.0 MiB/s | 12.3 KiB | 00m00s
[ 97/152] rpm-libs-0:4.20.0-1.fc41.x86_ 100% | 21.6 MiB/s | 309.9 KiB | 00m00s
[ 98/152] lua-libs-0:5.4.6-6.fc41.x86_6 100% | 7.2 MiB/s | 132.0 KiB | 00m00s
[ 99/152] rpm-build-libs-0:4.20.0-1.fc4 100% | 8.8 MiB/s | 99.1 KiB | 00m00s
[100/152] rpm-sequoia-0:1.7.0-2.fc41.x8 100% | 19.4 MiB/s | 892.5 KiB | 00m00s
[101/152] sqlite-libs-0:3.46.1-1.fc41.x 100% | 17.4 MiB/s | 712.7 KiB | 00m00s
[102/152] libselinux-0:3.7-6.fc41.x86_6 100% | 7.2 MiB/s | 88.7 KiB | 00m00s
[103/152] libgomp-0:14.2.1-3.fc41.x86_6 100% | 9.6 MiB/s | 354.1 KiB | 00m00s
[104/152] libsepol-0:3.7-2.fc41.x86_64 100% | 12.9 MiB/s | 342.2 KiB | 00m00s
[105/152] pam-0:1.6.1-5.fc41.x86_64 100% | 23.5 MiB/s | 554.0 KiB | 00m00s
[106/152] authselect-0:1.5.0-8.fc41.x86 100% | 15.8 MiB/s | 145.8 KiB | 00m00s
[107/152] authselect-libs-0:1.5.0-8.fc4 100% | 11.2 MiB/s | 218.0 KiB | 00m00s
[108/152] gdbm-libs-1:1.23-7.fc41.x86_6 100% | 13.7 MiB/s | 56.3 KiB | 00m00s
[109/152] libnsl2-0:2.0.1-2.fc41.x86_64 100% | 3.6 MiB/s | 29.6 KiB | 00m00s
[110/152] libtirpc-0:1.3.5-0.fc41.x86_6 100% | 11.5 MiB/s | 94.2 KiB | 00m00s
[111/152] libcom_err-0:1.47.1-3.fc41.x8 100% | 2.9 MiB/s | 26.4 KiB | 00m00s
[112/152] libverto-0:0.3.2-9.fc41.x86_6 100% | 20.2 MiB/s | 20.7 KiB | 00m00s
[113/152] keyutils-libs-0:1.6.3-4.fc41. 100% | 3.4 MiB/s | 31.6 KiB | 00m00s
[114/152] krb5-libs-0:1.21.3-2.fc41.x86 100% | 35.2 MiB/s | 757.4 KiB | 00m00s
[115/152] jansson-0:2.13.1-10.fc41.x86_ 100% | 6.2 MiB/s | 44.4 KiB | 00m00s
[116/152] alternatives-0:1.30-1.fc41.x8 100% | 2.3 MiB/s | 42.5 KiB | 00m00s
[117/152] audit-libs-0:4.0.2-1.fc41.x86 100% | 11.2 MiB/s | 126.7 KiB | 00m00s
[118/152] libcap-ng-0:0.8.5-3.fc41.x86_ 100% | 2.6 MiB/s | 32.6 KiB | 00m00s
[119/152] file-0:5.45-7.fc41.x86_64 100% | 4.8 MiB/s | 49.1 KiB | 00m00s
[120/152] pkgconf-pkg-config-0:2.3.0-1. 100% | 2.4 MiB/s | 10.0 KiB | 00m00s
[121/152] pkgconf-0:2.3.0-1.fc41.x86_64 100% | 4.0 MiB/s | 45.2 KiB | 00m00s
[122/152] pkgconf-m4-0:2.3.0-1.fc41.noa 100% | 842.4 KiB/s | 14.3 KiB | 00m00s
[123/152] file-libs-0:5.45-7.fc41.x86_6 100% | 13.1 MiB/s | 762.0 KiB | 00m00s
[124/152] libsemanage-0:3.7-3.fc41.x86_ 100% | 10.4 MiB/s | 117.2 KiB | 00m00s
[125/152] libpkgconf-0:2.3.0-1.fc41.x86 100% | 1.8 MiB/s | 38.5 KiB | 00m00s
[126/152] rust-srpm-macros-0:26.3-3.fc4 100% | 1.4 MiB/s | 12.7 KiB | 00m00s
[127/152] libpwquality-0:1.4.5-11.fc41. 100% | 7.8 MiB/s | 119.0 KiB | 00m00s
[128/152] gdbm-1:1.23-7.fc41.x86_64 100% | 5.1 MiB/s | 151.8 KiB | 00m00s
[129/152] cracklib-0:2.9.11-6.fc41.x86_ 100% | 6.4 MiB/s | 92.1 KiB | 00m00s
[130/152] libffi-0:3.4.6-3.fc41.x86_64 100% | 3.3 MiB/s | 39.9 KiB | 00m00s
[131/152] libxml2-0:2.12.8-2.fc41.x86_6 100% | 19.7 MiB/s | 687.3 KiB | 00m00s
[132/152] libtasn1-0:4.19.0-9.fc41.x86_ 100% | 6.0 MiB/s | 74.2 KiB | 00m00s
[133/152] p11-kit-0:0.25.5-3.fc41.x86_6 100% | 14.1 MiB/s | 490.9 KiB | 00m00s
[134/152] p11-kit-trust-0:0.25.5-3.fc41 100% | 7.6 MiB/s | 132.1 KiB | 00m00s
[135/152] xxhash-libs-0:0.8.2-4.fc41.x8 100% | 1.2 MiB/s | 36.8 KiB | 00m00s
[136/152] fedora-release-0:41-0.21.noar 100% | 1.0 MiB/s | 12.1 KiB | 00m00s
[137/152] fedora-release-identity-basic 100% | 1.0 MiB/s | 12.8 KiB | 00m00s
[138/152] libcurl-0:8.9.1-2.fc41.x86_64 100% | 22.1 MiB/s | 361.9 KiB | 00m00s
[139/152] libidn2-0:2.3.7-2.fc41.x86_64 100% | 8.3 MiB/s | 118.4 KiB | 00m00s
[140/152] binutils-0:2.43.1-2.fc41.x86_ 100% | 21.6 MiB/s | 6.5 MiB | 00m00s
[141/152] libnghttp2-0:1.62.1-2.fc41.x8 100% | 3.6 MiB/s | 76.6 KiB | 00m00s
[142/152] libpsl-0:0.21.5-4.fc41.x86_64 100% | 7.8 MiB/s | 64.1 KiB | 00m00s
[143/152] gdb-minimal-0:15.1-1.fc41.x86 100% | 32.2 MiB/s | 4.3 MiB | 00m00s
[144/152] libssh-0:0.10.6-8.fc41.x86_64 100% | 13.8 MiB/s | 211.8 KiB | 00m00s
[145/152] openldap-0:2.6.8-5.fc41.x86_6 100% | 31.2 MiB/s | 255.6 KiB | 00m00s
[146/152] libssh-config-0:0.10.6-8.fc41 100% | 0.0 B/s | 9.2 KiB | 00m00s
[147/152] publicsuffix-list-dafsa-0:202 100% | 5.7 MiB/s | 58.3 KiB | 00m00s
[148/152] libunistring-0:1.1-8.fc41.x86 100% | 21.3 MiB/s | 544.8 KiB | 00m00s
[149/152] libevent-0:2.1.12-14.fc41.x86 100% | 15.7 MiB/s | 257.5 KiB | 00m00s
[150/152] libtool-ltdl-0:2.4.7-12.fc41. 100% | 11.6 MiB/s | 35.6 KiB | 00m00s
[151/152] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 24.3 MiB/s | 794.9 KiB | 00m00s
[152/152] libbrotli-0:1.1.0-5.fc41.x86_ 100% | 23.7 MiB/s | 340.5 KiB | 00m00s
--------------------------------------------------------------------------------
[152/152] Total 100% | 37.6 MiB/s | 53.1 MiB | 00m01s
Running transaction
Importing PGP key 0xE99D6AD1:
UserID : "Fedora (41) <fedora-41-primary@fedoraproject.org>"
Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1
From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary
The key was successfully imported.
[ 1/154] Verify package files 100% | 748.0 B/s | 152.0 B | 00m00s
[ 2/154] Prepare transaction 100% | 1.9 KiB/s | 152.0 B | 00m00s
[ 3/154] Installing libgcc-0:14.2.1-3. 100% | 134.9 MiB/s | 276.3 KiB | 00m00s
[ 4/154] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s
[ 5/154] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s
[ 6/154] Installing fedora-release-ide 100% | 918.0 KiB/s | 940.0 B | 00m00s
[ 7/154] Installing fedora-gpg-keys-0: 100% | 21.0 MiB/s | 172.2 KiB | 00m00s
[ 8/154] Installing fedora-repos-0:41- 100% | 5.6 MiB/s | 5.7 KiB | 00m00s
[ 9/154] Installing fedora-release-com 100% | 11.6 MiB/s | 23.7 KiB | 00m00s
[ 10/154] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s
[ 11/154] Installing setup-0:2.15.0-5.f 100% | 44.3 MiB/s | 726.1 KiB | 00m00s
[ 12/154] Installing filesystem-0:3.18- 100% | 1.7 MiB/s | 212.5 KiB | 00m00s
[ 13/154] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s
[ 14/154] Installing rust-srpm-macros-0 100% | 5.4 MiB/s | 5.6 KiB | 00m00s
[ 15/154] Installing pkgconf-m4-0:2.3.0 100% | 14.5 MiB/s | 14.8 KiB | 00m00s
[ 16/154] Installing pcre2-syntax-0:10. 100% | 124.1 MiB/s | 254.1 KiB | 00m00s
[ 17/154] Installing ncurses-base-0:6.5 100% | 38.2 MiB/s | 351.7 KiB | 00m00s
[ 18/154] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s
[ 19/154] Installing ncurses-libs-0:6.5 100% | 137.0 MiB/s | 981.8 KiB | 00m00s
warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[ 20/154] Installing glibc-0:2.40-3.fc4 100% | 139.1 MiB/s | 6.7 MiB | 00m00s
[ 21/154] Installing bash-0:5.2.32-1.fc 100% | 263.5 MiB/s | 8.2 MiB | 00m00s
[ 22/154] Installing glibc-common-0:2.4 100% | 116.3 MiB/s | 1.0 MiB | 00m00s
warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[ 23/154] Installing glibc-gconv-extra- 100% | 137.3 MiB/s | 8.1 MiB | 00m00s
[ 24/154] Installing zlib-ng-compat-0:2 100% | 131.6 MiB/s | 134.8 KiB | 00m00s
[ 25/154] Installing bzip2-libs-0:1.0.8 100% | 79.9 MiB/s | 81.8 KiB | 00m00s
[ 26/154] Installing xz-libs-1:5.6.2-2. 100% | 105.2 MiB/s | 215.5 KiB | 00m00s
[ 27/154] Installing readline-0:8.2-10. 100% | 161.2 MiB/s | 495.3 KiB | 00m00s
[ 28/154] Installing popt-0:1.19-7.fc41 100% | 28.0 MiB/s | 143.5 KiB | 00m00s
[ 29/154] Installing libuuid-0:2.40.2-8 100% | 41.5 MiB/s | 42.5 KiB | 00m00s
[ 30/154] Installing libblkid-0:2.40.2- 100% | 128.7 MiB/s | 263.6 KiB | 00m00s
[ 31/154] Installing gmp-1:6.3.0-2.fc41 100% | 198.6 MiB/s | 813.7 KiB | 00m00s
[ 32/154] Installing libattr-0:2.5.2-4. 100% | 28.8 MiB/s | 29.5 KiB | 00m00s
[ 33/154] Installing libacl-0:2.3.2-2.f 100% | 39.8 MiB/s | 40.7 KiB | 00m00s
[ 34/154] Installing libxcrypt-0:4.4.36 100% | 87.7 MiB/s | 269.5 KiB | 00m00s
[ 35/154] Installing libstdc++-0:14.2.1 100% | 251.5 MiB/s | 2.8 MiB | 00m00s
[ 36/154] Installing libzstd-0:1.5.6-2. 100% | 259.5 MiB/s | 797.2 KiB | 00m00s
[ 37/154] Installing elfutils-libelf-0: 100% | 233.8 MiB/s | 1.2 MiB | 00m00s
[ 38/154] Installing libeconf-0:0.6.2-3 100% | 58.3 MiB/s | 59.7 KiB | 00m00s
[ 39/154] Installing gdbm-libs-1:1.23-7 100% | 60.3 MiB/s | 123.6 KiB | 00m00s
[ 40/154] Installing dwz-0:0.15-8.fc41. 100% | 146.6 MiB/s | 300.3 KiB | 00m00s
[ 41/154] Installing mpfr-0:4.2.1-5.fc4 100% | 203.5 MiB/s | 833.7 KiB | 00m00s
[ 42/154] Installing gawk-0:5.3.0-4.fc4 100% | 173.2 MiB/s | 1.7 MiB | 00m00s
[ 43/154] Installing unzip-0:6.0-64.fc4 100% | 127.0 MiB/s | 390.3 KiB | 00m00s
[ 44/154] Installing file-libs-0:5.45-7 100% | 473.0 MiB/s | 9.9 MiB | 00m00s
[ 45/154] Installing file-0:5.45-7.fc41 100% | 9.3 MiB/s | 105.0 KiB | 00m00s
[ 46/154] Installing crypto-policies-0: 100% | 14.5 MiB/s | 163.2 KiB | 00m00s
[ 47/154] Installing pcre2-0:10.44-1.fc 100% | 213.2 MiB/s | 654.9 KiB | 00m00s
[ 48/154] Installing grep-0:3.11-9.fc41 100% | 125.4 MiB/s | 1.0 MiB | 00m00s
[ 49/154] Installing xz-1:5.6.2-2.fc41. 100% | 120.5 MiB/s | 1.2 MiB | 00m00s
[ 50/154] Installing libsmartcols-0:2.4 100% | 177.2 MiB/s | 181.5 KiB | 00m00s
[ 51/154] Installing lz4-libs-0:1.10.0- 100% | 143.1 MiB/s | 146.6 KiB | 00m00s
[ 52/154] Installing lua-libs-0:5.4.6-6 100% | 139.8 MiB/s | 286.2 KiB | 00m00s
[ 53/154] Installing libsepol-0:3.7-2.f 100% | 266.5 MiB/s | 818.8 KiB | 00m00s
[ 54/154] Installing libselinux-0:3.7-6 100% | 178.0 MiB/s | 182.2 KiB | 00m00s
[ 55/154] Installing sed-0:4.9-3.fc41.x 100% | 121.3 MiB/s | 869.7 KiB | 00m00s
[ 56/154] Installing findutils-1:4.10.0 100% | 185.8 MiB/s | 1.9 MiB | 00m00s
[ 57/154] Installing libmount-0:2.40.2- 100% | 172.3 MiB/s | 352.9 KiB | 00m00s
[ 58/154] Installing libcom_err-0:1.47. 100% | 66.7 MiB/s | 68.3 KiB | 00m00s
[ 59/154] Installing alternatives-0:1.3 100% | 66.3 MiB/s | 67.9 KiB | 00m00s
[ 60/154] Installing libcap-ng-0:0.8.5- 100% | 69.4 MiB/s | 71.0 KiB | 00m00s
[ 61/154] Installing audit-libs-0:4.0.2 100% | 162.8 MiB/s | 333.4 KiB | 00m00s
[ 62/154] Installing pam-libs-0:1.6.1-5 100% | 138.1 MiB/s | 141.4 KiB | 00m00s
[ 63/154] Installing libcap-0:2.70-4.fc 100% | 73.3 MiB/s | 225.2 KiB | 00m00s
[ 64/154] Installing systemd-libs-0:256 100% | 254.2 MiB/s | 2.0 MiB | 00m00s
[ 65/154] Installing libffi-0:3.4.6-3.f 100% | 85.7 MiB/s | 87.8 KiB | 00m00s
[ 66/154] Installing libtasn1-0:4.19.0- 100% | 86.7 MiB/s | 177.5 KiB | 00m00s
[ 67/154] Installing p11-kit-0:0.25.5-3 100% | 157.7 MiB/s | 2.2 MiB | 00m00s
[ 68/154] Installing libunistring-0:1.1 100% | 247.2 MiB/s | 1.7 MiB | 00m00s
[ 69/154] Installing libidn2-0:2.3.7-2. 100% | 81.8 MiB/s | 335.1 KiB | 00m00s
[ 70/154] Installing libpsl-0:0.21.5-4. 100% | 79.7 MiB/s | 81.7 KiB | 00m00s
[ 71/154] Installing p11-kit-trust-0:0. 100% | 29.5 MiB/s | 393.1 KiB | 00m00s
[ 72/154] Installing util-linux-core-0: 100% | 126.7 MiB/s | 1.5 MiB | 00m00s
[ 73/154] Installing libsemanage-0:3.7- 100% | 96.1 MiB/s | 295.3 KiB | 00m00s
[ 74/154] Installing shadow-utils-2:4.1 100% | 126.2 MiB/s | 4.2 MiB | 00m00s
[ 75/154] Installing tar-2:1.35-4.fc41. 100% | 227.6 MiB/s | 3.0 MiB | 00m00s
[ 76/154] Installing zstd-0:1.5.6-2.fc4 100% | 281.9 MiB/s | 1.7 MiB | 00m00s
[ 77/154] Installing zip-0:3.0-41.fc41. 100% | 172.6 MiB/s | 707.1 KiB | 00m00s
[ 78/154] Installing gdbm-1:1.23-7.fc41 100% | 113.7 MiB/s | 465.8 KiB | 00m00s
[ 79/154] Installing cyrus-sasl-lib-0:2 100% | 256.2 MiB/s | 2.3 MiB | 00m00s
[ 80/154] Installing libfdisk-0:2.40.2- 100% | 177.7 MiB/s | 363.9 KiB | 00m00s
[ 81/154] Installing libxml2-0:2.12.8-2 100% | 244.6 MiB/s | 1.7 MiB | 00m00s
[ 82/154] Installing bzip2-0:1.0.8-19.f 100% | 48.9 MiB/s | 100.2 KiB | 00m00s
[ 83/154] Installing add-determinism-0: 100% | 280.7 MiB/s | 2.2 MiB | 00m00s
[ 84/154] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s
[ 85/154] Installing sqlite-libs-0:3.46 100% | 238.2 MiB/s | 1.4 MiB | 00m00s
[ 86/154] Installing ed-0:1.20.2-2.fc41 100% | 72.8 MiB/s | 149.2 KiB | 00m00s
[ 87/154] Installing patch-0:2.7.6-25.f 100% | 131.0 MiB/s | 268.2 KiB | 00m00s
[ 88/154] Installing elfutils-default-y 100% | 227.0 KiB/s | 2.0 KiB | 00m00s
[ 89/154] Installing elfutils-libs-0:0. 100% | 158.2 MiB/s | 648.0 KiB | 00m00s
[ 90/154] Installing cpio-0:2.15-2.fc41 100% | 157.1 MiB/s | 1.1 MiB | 00m00s
[ 91/154] Installing diffutils-0:3.10-8 100% | 176.7 MiB/s | 1.6 MiB | 00m00s
[ 92/154] Installing libgomp-0:14.2.1-3 100% | 256.2 MiB/s | 524.8 KiB | 00m00s
[ 93/154] Installing keyutils-libs-0:1. 100% | 54.5 MiB/s | 55.8 KiB | 00m00s
[ 94/154] Installing libverto-0:0.3.2-9 100% | 30.5 MiB/s | 31.3 KiB | 00m00s
[ 95/154] Installing jansson-0:2.13.1-1 100% | 87.6 MiB/s | 89.7 KiB | 00m00s
[ 96/154] Installing libpkgconf-0:2.3.0 100% | 77.5 MiB/s | 79.3 KiB | 00m00s
[ 97/154] Installing pkgconf-0:2.3.0-1. 100% | 44.5 MiB/s | 91.1 KiB | 00m00s
[ 98/154] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s
[ 99/154] Installing xxhash-libs-0:0.8. 100% | 87.7 MiB/s | 89.8 KiB | 00m00s
[100/154] Installing libnghttp2-0:1.62. 100% | 163.2 MiB/s | 167.1 KiB | 00m00s
[101/154] Installing libtool-ltdl-0:2.4 100% | 65.7 MiB/s | 67.3 KiB | 00m00s
[102/154] Installing libbrotli-0:1.1.0- 100% | 205.0 MiB/s | 839.9 KiB | 00m00s
[103/154] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s
[104/154] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s
[105/154] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s
[106/154] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s
[107/154] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s
[108/154] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s
[109/154] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s
[110/154] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s
[111/154] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s
[112/154] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s
[113/154] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s
[114/154] Installing coreutils-common-0 100% | 238.1 MiB/s | 11.2 MiB | 00m00s
[115/154] Installing openssl-libs-1:3.2 100% | 313.2 MiB/s | 7.8 MiB | 00m00s
[116/154] Installing coreutils-0:9.5-10 100% | 149.0 MiB/s | 5.7 MiB | 00m00s
[117/154] Installing ca-certificates-0: 100% | 2.4 MiB/s | 2.4 MiB | 00m01s
[118/154] Installing krb5-libs-0:1.21.3 100% | 176.9 MiB/s | 2.3 MiB | 00m00s
[119/154] Installing libarchive-0:3.7.4 100% | 150.5 MiB/s | 924.6 KiB | 00m00s
[120/154] Installing libtirpc-0:1.3.5-0 100% | 99.8 MiB/s | 204.5 KiB | 00m00s
[121/154] Installing gzip-0:1.13-2.fc41 100% | 77.1 MiB/s | 394.6 KiB | 00m00s
[122/154] Installing authselect-libs-0: 100% | 68.1 MiB/s | 837.2 KiB | 00m00s
[123/154] Installing cracklib-0:2.9.11- 100% | 24.4 MiB/s | 250.3 KiB | 00m00s
[124/154] Installing libpwquality-0:1.4 100% | 38.2 MiB/s | 430.1 KiB | 00m00s
[125/154] Installing libnsl2-0:2.0.1-2. 100% | 28.8 MiB/s | 59.1 KiB | 00m00s
[126/154] Installing pam-0:1.6.1-5.fc41 100% | 58.7 MiB/s | 1.9 MiB | 00m00s
[127/154] Installing libssh-0:0.10.6-8. 100% | 125.8 MiB/s | 515.4 KiB | 00m00s
[128/154] Installing rpm-sequoia-0:1.7. 100% | 197.3 MiB/s | 2.4 MiB | 00m00s
[129/154] Installing rpm-libs-0:4.20.0- 100% | 142.1 MiB/s | 727.4 KiB | 00m00s
[130/154] Installing rpm-build-libs-0:4 100% | 101.3 MiB/s | 207.5 KiB | 00m00s
[131/154] Installing libevent-0:2.1.12- 100% | 146.4 MiB/s | 899.5 KiB | 00m00s
[132/154] Installing openldap-0:2.6.8-5 100% | 105.5 MiB/s | 648.0 KiB | 00m00s
[133/154] Installing libcurl-0:8.9.1-2. 100% | 133.3 MiB/s | 819.2 KiB | 00m00s
[134/154] Installing elfutils-debuginfo 100% | 32.7 MiB/s | 66.9 KiB | 00m00s
[135/154] Installing elfutils-0:0.191-8 100% | 182.9 MiB/s | 2.6 MiB | 00m00s
[136/154] Installing binutils-0:2.43.1- 100% | 203.9 MiB/s | 27.5 MiB | 00m00s
[137/154] Installing gdb-minimal-0:15.1 100% | 224.0 MiB/s | 13.0 MiB | 00m00s
[138/154] Installing debugedit-0:5.0-17 100% | 65.8 MiB/s | 202.0 KiB | 00m00s
[139/154] Installing curl-0:8.9.1-2.fc4 100% | 32.5 MiB/s | 798.6 KiB | 00m00s
[140/154] Installing rpm-0:4.20.0-1.fc4 100% | 65.9 MiB/s | 2.5 MiB | 00m00s
[141/154] Installing efi-srpm-macros-0: 100% | 20.1 MiB/s | 41.2 KiB | 00m00s
[142/154] Installing lua-srpm-macros-0: 100% | 1.9 MiB/s | 1.9 KiB | 00m00s
[143/154] Installing zig-srpm-macros-0: 100% | 1.6 MiB/s | 1.7 KiB | 00m00s
[144/154] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s
[145/154] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.4 KiB | 00m00s
[146/154] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s
[147/154] Installing python-srpm-macros 100% | 25.5 MiB/s | 52.2 KiB | 00m00s
[148/154] Installing redhat-rpm-config- 100% | 46.4 MiB/s | 190.1 KiB | 00m00s
[149/154] Installing rpm-build-0:4.20.0 100% | 39.6 MiB/s | 202.8 KiB | 00m00s
[150/154] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s
[151/154] Installing util-linux-0:2.40. 100% | 69.5 MiB/s | 3.7 MiB | 00m00s
[152/154] Installing authselect-0:1.5.0 100% | 31.6 MiB/s | 161.9 KiB | 00m00s
[153/154] Installing which-0:2.21-42.fc 100% | 26.8 MiB/s | 82.4 KiB | 00m00s
warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[154/154] Installing info-0:7.1-3.fc41. 100% | 272.5 KiB/s | 362.2 KiB | 00m01s
Warning: skipped PGP checks for 15 packages from repository: copr_base
Complete!
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: add-determinism-0.3.6-1.fc41.x86_64
alternatives-1.30-1.fc41.x86_64
ansible-srpm-macros-1-16.fc41.noarch
audit-libs-4.0.2-1.fc41.x86_64
authselect-1.5.0-8.fc41.x86_64
authselect-libs-1.5.0-8.fc41.x86_64
basesystem-11-21.fc41.noarch
bash-5.2.32-1.fc41.x86_64
binutils-2.43.1-2.fc41.x86_64
build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch
bzip2-1.0.8-19.fc41.x86_64
bzip2-libs-1.0.8-19.fc41.x86_64
ca-certificates-2024.2.69_v8.0.401-1.0.fc41.noarch
coreutils-9.5-10.fc41.x86_64
coreutils-common-9.5-10.fc41.x86_64
cpio-2.15-2.fc41.x86_64
cracklib-2.9.11-6.fc41.x86_64
crypto-policies-20240826-1.gite824389.fc41.noarch
curl-8.9.1-2.fc41.x86_64
cyrus-sasl-lib-2.1.28-27.fc41.x86_64
debugedit-5.0-17.fc41.x86_64
diffutils-3.10-8.fc41.x86_64
dwz-0.15-8.fc41.x86_64
ed-1.20.2-2.fc41.x86_64
efi-srpm-macros-5-12.fc41.noarch
elfutils-0.191-8.fc41.x86_64
elfutils-debuginfod-client-0.191-8.fc41.x86_64
elfutils-default-yama-scope-0.191-8.fc41.noarch
elfutils-libelf-0.191-8.fc41.x86_64
elfutils-libs-0.191-8.fc41.x86_64
fedora-gpg-keys-41-0.5.noarch
fedora-release-41-0.21.noarch
fedora-release-common-41-0.21.noarch
fedora-release-identity-basic-41-0.21.noarch
fedora-repos-41-0.5.noarch
file-5.45-7.fc41.x86_64
file-libs-5.45-7.fc41.x86_64
filesystem-3.18-23.fc41.x86_64
findutils-4.10.0-4.fc41.x86_64
fonts-srpm-macros-2.0.5-17.fc41.noarch
forge-srpm-macros-0.3.2-1.fc41.noarch
fpc-srpm-macros-1.3-13.fc41.noarch
gawk-5.3.0-4.fc41.x86_64
gdb-minimal-15.1-1.fc41.x86_64
gdbm-1.23-7.fc41.x86_64
gdbm-libs-1.23-7.fc41.x86_64
ghc-srpm-macros-1.9.1-2.fc41.noarch
glibc-2.40-3.fc41.x86_64
glibc-common-2.40-3.fc41.x86_64
glibc-gconv-extra-2.40-3.fc41.x86_64
glibc-minimal-langpack-2.40-3.fc41.x86_64
gmp-6.3.0-2.fc41.x86_64
gnat-srpm-macros-6-6.fc41.noarch
go-srpm-macros-3.6.0-3.fc41.noarch
gpg-pubkey-e99d6ad1-64d2612c
grep-3.11-9.fc41.x86_64
gzip-1.13-2.fc41.x86_64
info-7.1-3.fc41.x86_64
jansson-2.13.1-10.fc41.x86_64
kernel-srpm-macros-1.0-24.fc41.noarch
keyutils-libs-1.6.3-4.fc41.x86_64
krb5-libs-1.21.3-2.fc41.x86_64
libacl-2.3.2-2.fc41.x86_64
libarchive-3.7.4-3.fc41.x86_64
libattr-2.5.2-4.fc41.x86_64
libblkid-2.40.2-8.fc41.x86_64
libbrotli-1.1.0-5.fc41.x86_64
libcap-2.70-4.fc41.x86_64
libcap-ng-0.8.5-3.fc41.x86_64
libcom_err-1.47.1-3.fc41.x86_64
libcurl-8.9.1-2.fc41.x86_64
libeconf-0.6.2-3.fc41.x86_64
libevent-2.1.12-14.fc41.x86_64
libfdisk-2.40.2-8.fc41.x86_64
libffi-3.4.6-3.fc41.x86_64
libgcc-14.2.1-3.fc41.x86_64
libgomp-14.2.1-3.fc41.x86_64
libidn2-2.3.7-2.fc41.x86_64
libmount-2.40.2-8.fc41.x86_64
libnghttp2-1.62.1-2.fc41.x86_64
libnsl2-2.0.1-2.fc41.x86_64
libpkgconf-2.3.0-1.fc41.x86_64
libpsl-0.21.5-4.fc41.x86_64
libpwquality-1.4.5-11.fc41.x86_64
libselinux-3.7-6.fc41.x86_64
libsemanage-3.7-3.fc41.x86_64
libsepol-3.7-2.fc41.x86_64
libsmartcols-2.40.2-8.fc41.x86_64
libssh-0.10.6-8.fc41.x86_64
libssh-config-0.10.6-8.fc41.noarch
libstdc++-14.2.1-3.fc41.x86_64
libtasn1-4.19.0-9.fc41.x86_64
libtirpc-1.3.5-0.fc41.x86_64
libtool-ltdl-2.4.7-12.fc41.x86_64
libunistring-1.1-8.fc41.x86_64
libuuid-2.40.2-8.fc41.x86_64
libverto-0.3.2-9.fc41.x86_64
libxcrypt-4.4.36-7.fc41.x86_64
libxml2-2.12.8-2.fc41.x86_64
libzstd-1.5.6-2.fc41.x86_64
lua-libs-5.4.6-6.fc41.x86_64
lua-srpm-macros-1-14.fc41.noarch
lz4-libs-1.10.0-1.fc41.x86_64
mpfr-4.2.1-5.fc41.x86_64
ncurses-base-6.5-2.20240629.fc41.noarch
ncurses-libs-6.5-2.20240629.fc41.x86_64
ocaml-srpm-macros-10-3.fc41.noarch
openblas-srpm-macros-2-18.fc41.noarch
openldap-2.6.8-5.fc41.x86_64
openssl-libs-3.2.2-9.fc41.x86_64
p11-kit-0.25.5-3.fc41.x86_64
p11-kit-trust-0.25.5-3.fc41.x86_64
package-notes-srpm-macros-0.5-12.fc41.noarch
pam-1.6.1-5.fc41.x86_64
pam-libs-1.6.1-5.fc41.x86_64
patch-2.7.6-25.fc41.x86_64
pcre2-10.44-1.fc41.1.x86_64
pcre2-syntax-10.44-1.fc41.1.noarch
perl-srpm-macros-1-56.fc41.noarch
pkgconf-2.3.0-1.fc41.x86_64
pkgconf-m4-2.3.0-1.fc41.noarch
pkgconf-pkg-config-2.3.0-1.fc41.x86_64
popt-1.19-7.fc41.x86_64
publicsuffix-list-dafsa-20240107-4.fc41.noarch
pyproject-srpm-macros-1.15.1-1.fc41.noarch
python-srpm-macros-3.13-3.fc41.noarch
qt5-srpm-macros-5.15.15-1.fc41.noarch
qt6-srpm-macros-6.7.2-3.fc41.noarch
readline-8.2-10.fc41.x86_64
redhat-rpm-config-293-1.fc41.noarch
rpm-4.20.0-1.fc41.x86_64
rpm-build-4.20.0-1.fc41.x86_64
rpm-build-libs-4.20.0-1.fc41.x86_64
rpm-libs-4.20.0-1.fc41.x86_64
rpm-sequoia-1.7.0-2.fc41.x86_64
rust-srpm-macros-26.3-3.fc41.noarch
sed-4.9-3.fc41.x86_64
setup-2.15.0-5.fc41.noarch
shadow-utils-4.15.1-12.fc41.x86_64
sqlite-libs-3.46.1-1.fc41.x86_64
systemd-libs-256.7-1.fc41.x86_64
tar-1.35-4.fc41.x86_64
unzip-6.0-64.fc41.x86_64
util-linux-2.40.2-8.fc41.x86_64
util-linux-core-2.40.2-8.fc41.x86_64
which-2.21-42.fc41.x86_64
xxhash-libs-0.8.2-4.fc41.x86_64
xz-5.6.2-2.fc41.x86_64
xz-libs-5.6.2-2.fc41.x86_64
zig-srpm-macros-1-3.fc41.noarch
zip-3.0-41.fc41.x86_64
zlib-ng-compat-2.1.7-3.fc41.x86_64
zstd-1.5.6-2.fc41.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1728777600
Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-41-x86_64-1728851955.517208/root/var/log/dnf5.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-dz2d96ia/snakemake/snakemake.spec) Config(child) 0 minutes 40 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-8.18.2-4.fc41.src.rpm) Config(fedora-41-x86_64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1728851955.517208/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1728851955.517208/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1728851955.517208/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
rpm-4.19.94-1.fc41.x86_64
rpm-sequoia-1.7.0-2.fc41.x86_64
dnf5-5.2.6.2-1.fc41.x86_64
dnf5-plugins-5.2.6.2-1.fc41.x86_64
Finish: chroot init
Start: build phase for snakemake-8.18.2-4.fc41.src.rpm
Start: build setup for snakemake-8.18.2-4.fc41.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1728777600
Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.src.rpm
Updating and loading repositories:
updates 100% | 795.4 KiB/s | 28.6 KiB | 00m00s
fedora 100% | 1.0 MiB/s | 25.9 KiB | 00m00s
Copr repository 100% | 29.0 KiB/s | 1.5 KiB | 00m00s
Repositories loaded.
Package Arch Version Repository Size
Installing:
environment-modules x86_64 5.4.0-2.fc41 fedora 1.7 MiB
graphviz x86_64 12.1.2-1.fc41 copr_base 20.8 MiB
help2man noarch 1.49.3-6.fc41 fedora 415.6 KiB
python-unversioned-command noarch 3.13.0-1.fc41 fedora 23.0 B
python3-boto3 noarch 1.35.37-1.fc41 fedora 2.0 MiB
python3-devel x86_64 3.13.0-1.fc41 fedora 1.8 MiB
python3-flask noarch 1:3.0.3-8.fc41 copr_base 862.7 KiB
python3-google-cloud-storage noarch 2.14.0-6.fc41 fedora 1.2 MiB
python3-pandas x86_64 2.2.1-7.fc41 fedora 42.0 MiB
python3-pytest noarch 8.3.1-5.fc41 copr_base 20.8 MiB
python3-pytest-mock noarch 3.14.0-2.fc41 fedora 117.0 KiB
python3-snakemake-executor-plugin-cluster-generic noarch 1.0.9-3.fc41 fedora 39.7 KiB
python3-snakemake-storage-plugin-fs noarch 1.0.6-1.fc41 fedora 30.7 KiB
python3-snakemake-storage-plugin-http noarch 0.2.3-6.fc41 fedora 28.3 KiB
python3-snakemake-storage-plugin-s3 noarch 0.2.12-1.fc41 fedora 37.3 KiB
singularity-ce x86_64 4.2.1-1.fc41 fedora 180.6 MiB
strace x86_64 6.10-1.fc41 fedora 2.5 MiB
stress x86_64 1.0.7-5.fc41 fedora 67.9 KiB
vim-filesystem noarch 2:9.1.737-1.fc41 fedora 40.0 B
Installing dependencies:
abattis-cantarell-vf-fonts noarch 0.301-13.fc41 fedora 192.7 KiB
abseil-cpp x86_64 20240722.0-1.fc41 fedora 2.6 MiB
adobe-mappings-cmap noarch 20230622-4.fc41 fedora 14.4 MiB
adobe-mappings-cmap-deprecated noarch 20230622-4.fc41 fedora 582.1 KiB
adobe-mappings-pdf noarch 20190401-8.fc41 fedora 4.4 MiB
avahi-libs x86_64 0.8-29.fc41 fedora 166.3 KiB
c-ares x86_64 1.33.0-1.fc41 fedora 240.3 KiB
cairo x86_64 1.18.0-4.fc41 fedora 1.7 MiB
cairo-gobject x86_64 1.18.0-4.fc41 fedora 35.2 KiB
conmon x86_64 2:2.1.12-3.fc41 fedora 166.4 KiB
crun x86_64 1.17-1.fc41 fedora 519.7 KiB
cryptsetup x86_64 2.7.5-1.fc41 fedora 715.8 KiB
cryptsetup-libs x86_64 2.7.5-1.fc41 fedora 2.3 MiB
cups-libs x86_64 1:2.4.11-1.fc41 fedora 622.9 KiB
dbus x86_64 1:1.14.10-4.fc41 fedora 0.0 B
dbus-broker x86_64 36-4.fc41 fedora 382.8 KiB
dbus-common noarch 1:1.14.10-4.fc41 fedora 11.2 KiB
dbus-libs x86_64 1:1.14.10-4.fc41 fedora 368.9 KiB
default-fonts-core-sans noarch 4.1-2.fc41 fedora 11.9 KiB
device-mapper x86_64 1.02.201-2.fc41 copr_base 352.5 KiB
device-mapper-libs x86_64 1.02.201-2.fc41 copr_base 418.7 KiB
expat x86_64 2.6.3-1.fc41 fedora 291.5 KiB
flexiblas x86_64 3.4.4-3.fc41 fedora 48.5 KiB
flexiblas-netlib x86_64 3.4.4-3.fc41 fedora 10.7 MiB
flexiblas-openblas-openmp x86_64 3.4.4-3.fc41 fedora 43.3 KiB
fontconfig x86_64 2.15.0-8.fc41 fedora 791.9 KiB
fonts-filesystem noarch 1:2.0.5-17.fc41 fedora 0.0 B
freetype x86_64 2.13.3-1.fc41 fedora 850.5 KiB
fribidi x86_64 1.0.15-2.fc41 fedora 368.4 KiB
fuse x86_64 2.9.9-22.fc41 fedora 219.0 KiB
fuse-common x86_64 3.16.2-4.fc41 fedora 38.0 B
fuse3 x86_64 3.16.2-4.fc41 fedora 126.0 KiB
fuse3-libs x86_64 3.16.2-4.fc41 fedora 281.5 KiB
gd x86_64 2.3.3-17.fc41 fedora 403.7 KiB
gdk-pixbuf2 x86_64 2.42.12-6.fc41 fedora 2.5 MiB
glib2 x86_64 2.82.1-1.fc41 fedora 14.7 MiB
gnupg2 x86_64 2.4.5-3.fc41 fedora 9.5 MiB
gnutls x86_64 3.8.6-7.fc41 fedora 3.2 MiB
google-crc32c x86_64 1.1.2-10.fc41 fedora 24.1 KiB
google-droid-sans-fonts noarch 20200215-21.fc41 fedora 6.3 MiB
google-noto-fonts-common noarch 20240701-2.fc41 fedora 17.5 KiB
google-noto-sans-vf-fonts noarch 20240701-2.fc41 fedora 1.2 MiB
gpgme x86_64 1.23.2-5.fc41 fedora 579.3 KiB
gpgmepp x86_64 1.23.2-5.fc41 fedora 424.2 KiB
graphite2 x86_64 1.3.14-16.fc41 fedora 192.0 KiB
graphviz-libs x86_64 12.1.2-1.fc41 copr_base 1.2 MiB
groff-base x86_64 1.23.0-7.fc41 fedora 3.8 MiB
grpc-data noarch 1.48.4-41.fc41 fedora 29.6 KiB
gts x86_64 0.7.6-49.20121130.fc41 fedora 650.2 KiB
harfbuzz x86_64 9.0.0-3.fc41 fedora 2.6 MiB
jbig2dec-libs x86_64 0.20-5.fc41 fedora 169.0 KiB
jbigkit-libs x86_64 2.1-30.fc41 fedora 117.6 KiB
json-c x86_64 0.17-4.fc41 fedora 82.4 KiB
lasi x86_64 1.1.3-14.fc41 fedora 130.8 KiB
lcms2 x86_64 2.16-4.fc41 fedora 424.9 KiB
less x86_64 661-2.fc41 fedora 405.3 KiB
libICE x86_64 1.1.1-4.fc41 fedora 181.2 KiB
libSM x86_64 1.2.4-4.fc41 fedora 97.3 KiB
libX11 x86_64 1.8.10-2.fc41 fedora 1.3 MiB
libX11-common noarch 1.8.10-2.fc41 fedora 1.1 MiB
libXau x86_64 1.0.11-7.fc41 fedora 66.9 KiB
libXext x86_64 1.3.6-2.fc41 fedora 90.1 KiB
libXft x86_64 2.3.8-7.fc41 fedora 164.5 KiB
libXpm x86_64 3.5.17-4.fc41 fedora 148.4 KiB
libXrender x86_64 0.9.11-7.fc41 fedora 50.1 KiB
libXt x86_64 1.3.0-4.fc41 fedora 429.9 KiB
libaom x86_64 3.9.0-3.fc41 fedora 5.1 MiB
libassuan x86_64 2.5.7-2.fc41 fedora 163.8 KiB
libavif x86_64 1.0.4-7.fc41 fedora 183.8 KiB
libb2 x86_64 0.98.1-12.fc41 fedora 42.2 KiB
libdatrie x86_64 0.2.13-10.fc41 fedora 57.9 KiB
libdav1d x86_64 1.4.3-2.fc41 fedora 1.7 MiB
libgcrypt x86_64 1.11.0-3.fc41 fedora 1.5 MiB
libgfortran x86_64 14.2.1-3.fc41 fedora 3.0 MiB
libgpg-error x86_64 1.50-2.fc41 fedora 889.5 KiB
libgs x86_64 10.03.1-3.fc41 fedora 23.2 MiB
libicu x86_64 74.2-2.fc41 fedora 34.9 MiB
libijs x86_64 0.35-23.fc41 fedora 61.6 KiB
libimagequant x86_64 4.0.3-5.fc41 fedora 666.7 KiB
libjpeg-turbo x86_64 3.0.2-3.fc41 fedora 776.9 KiB
libksba x86_64 1.6.7-2.fc41 fedora 398.4 KiB
liblerc x86_64 4.0.0-7.fc41 fedora 607.5 KiB
libpaper x86_64 1:2.1.1-7.fc41 fedora 48.9 KiB
libpipeline x86_64 1.5.7-6.fc41 fedora 124.3 KiB
libpng x86_64 2:1.6.40-4.fc41 fedora 245.8 KiB
libquadmath x86_64 14.2.1-3.fc41 fedora 325.9 KiB
librsvg2 x86_64 2.59.1-1.fc41 fedora 4.6 MiB
libseccomp x86_64 2.5.5-2.fc41 fedora 173.3 KiB
libthai x86_64 0.1.29-9.fc41 fedora 783.5 KiB
libtiff x86_64 4.6.0-6.fc41 fedora 606.0 KiB
libvmaf x86_64 3.0.0-2.fc41 fedora 823.0 KiB
libwebp x86_64 1.4.0-4.fc41 fedora 822.6 KiB
libxcb x86_64 1.17.0-3.fc41 fedora 1.2 MiB
lzo x86_64 2.10-13.fc41 fedora 166.9 KiB
man-db x86_64 2.12.1-2.fc41 fedora 2.8 MiB
mpdecimal x86_64 2.5.1-16.fc41 fedora 204.9 KiB
ncurses x86_64 6.5-2.20240629.fc41 fedora 627.3 KiB
netpbm x86_64 11.02.00-7.fc41 fedora 577.1 KiB
nettle x86_64 3.10-3.fc41 fedora 793.0 KiB
npth x86_64 1.7-2.fc41 fedora 49.6 KiB
nspr x86_64 4.35.0-29.fc41 fedora 320.4 KiB
nss x86_64 3.104.0-1.fc41 fedora 1.9 MiB
nss-softokn x86_64 3.104.0-1.fc41 fedora 1.9 MiB
nss-softokn-freebl x86_64 3.104.0-1.fc41 fedora 783.6 KiB
nss-sysinit x86_64 3.104.0-1.fc41 fedora 22.2 KiB
nss-util x86_64 3.104.0-1.fc41 fedora 205.1 KiB
openblas x86_64 0.3.26-5.fc41 fedora 96.0 KiB
openblas-openmp x86_64 0.3.26-5.fc41 fedora 39.4 MiB
openjpeg x86_64 2.5.2-4.fc41 fedora 445.7 KiB
pango x86_64 1.54.0-2.fc41 fedora 996.2 KiB
perl-AutoLoader noarch 5.74-511.fc41 fedora 20.5 KiB
perl-B x86_64 1.89-511.fc41 fedora 498.0 KiB
perl-Carp noarch 1.54-511.fc41 fedora 46.6 KiB
perl-Class-Struct noarch 0.68-511.fc41 fedora 25.4 KiB
perl-Data-Dumper x86_64 2.189-512.fc41 fedora 111.7 KiB
perl-Digest noarch 1.20-511.fc41 fedora 35.3 KiB
perl-Digest-MD5 x86_64 2.59-5.fc41 fedora 59.8 KiB
perl-DynaLoader x86_64 1.56-511.fc41 fedora 32.1 KiB
perl-Encode x86_64 4:3.21-511.fc41 fedora 4.7 MiB
perl-Errno x86_64 1.38-511.fc41 fedora 8.4 KiB
perl-Exporter noarch 5.78-511.fc41 fedora 54.3 KiB
perl-Fcntl x86_64 1.18-511.fc41 fedora 49.0 KiB
perl-File-Basename noarch 2.86-511.fc41 fedora 14.0 KiB
perl-File-Path noarch 2.18-511.fc41 fedora 63.5 KiB
perl-File-Temp noarch 1:0.231.100-511.fc41 fedora 162.3 KiB
perl-File-stat noarch 1.14-511.fc41 fedora 12.5 KiB
perl-FileHandle noarch 2.05-511.fc41 fedora 9.3 KiB
perl-Getopt-Long noarch 1:2.58-2.fc41 fedora 144.5 KiB
perl-Getopt-Std noarch 1.14-511.fc41 fedora 11.2 KiB
perl-HTTP-Tiny noarch 0.088-512.fc41 fedora 152.2 KiB
perl-IO x86_64 1.55-511.fc41 fedora 151.1 KiB
perl-IO-Socket-IP noarch 0.42-512.fc41 fedora 98.7 KiB
perl-IO-Socket-SSL noarch 2.089-1.fc41 fedora 703.3 KiB
perl-IPC-Open3 noarch 1.22-511.fc41 fedora 22.5 KiB
perl-MIME-Base32 noarch 1.303-21.fc41 fedora 30.7 KiB
perl-MIME-Base64 x86_64 3.16-511.fc41 fedora 46.1 KiB
perl-Mozilla-CA noarch 20240730-1.fc41 fedora 9.8 KiB
perl-Net-SSLeay x86_64 1.94-7.fc41 fedora 1.3 MiB
perl-POSIX x86_64 2.20-511.fc41 fedora 235.1 KiB
perl-PathTools x86_64 3.91-511.fc41 fedora 180.0 KiB
perl-Pod-Escapes noarch 1:1.07-511.fc41 fedora 24.9 KiB
perl-Pod-Perldoc noarch 3.28.01-512.fc41 fedora 163.7 KiB
perl-Pod-Simple noarch 1:3.45-511.fc41 fedora 560.9 KiB
perl-Pod-Usage noarch 4:2.03-511.fc41 fedora 84.8 KiB
perl-Scalar-List-Utils x86_64 5:1.66-1.fc41 fedora 146.7 KiB
perl-SelectSaver noarch 1.02-511.fc41 fedora 2.2 KiB
perl-Socket x86_64 4:2.038-511.fc41 fedora 124.0 KiB
perl-Storable x86_64 1:3.32-511.fc41 fedora 232.4 KiB
perl-Symbol noarch 1.09-511.fc41 fedora 6.8 KiB
perl-Term-ANSIColor noarch 5.01-512.fc41 fedora 97.5 KiB
perl-Term-Cap noarch 1.18-511.fc41 fedora 29.3 KiB
perl-Text-ParseWords noarch 3.31-511.fc41 fedora 13.6 KiB
perl-Text-Tabs+Wrap noarch 2024.001-511.fc41 fedora 22.6 KiB
perl-Time-Local noarch 2:1.350-511.fc41 fedora 69.0 KiB
perl-URI noarch 5.30-1.fc41 fedora 256.9 KiB
perl-base noarch 2.27-511.fc41 fedora 12.5 KiB
perl-constant noarch 1.33-512.fc41 fedora 26.2 KiB
perl-if noarch 0.61.000-511.fc41 fedora 5.8 KiB
perl-interpreter x86_64 4:5.40.0-511.fc41 fedora 122.3 KiB
perl-libnet noarch 3.15-512.fc41 fedora 289.4 KiB
perl-libs x86_64 4:5.40.0-511.fc41 fedora 9.9 MiB
perl-locale noarch 1.12-511.fc41 fedora 6.5 KiB
perl-mro x86_64 1.29-511.fc41 fedora 45.6 KiB
perl-overload noarch 1.37-511.fc41 fedora 71.5 KiB
perl-overloading noarch 0.02-511.fc41 fedora 4.8 KiB
perl-parent noarch 1:0.242-1.fc41 fedora 10.0 KiB
perl-podlators noarch 1:6.0.2-2.fc41 fedora 317.5 KiB
perl-vars noarch 1.05-511.fc41 fedora 3.9 KiB
pixman x86_64 0.43.4-2.fc41 fedora 718.1 KiB
poppler x86_64 24.08.0-1.fc41 fedora 3.6 MiB
poppler-data noarch 0.4.11-8.fc41 fedora 12.3 MiB
poppler-glib x86_64 24.08.0-1.fc41 fedora 586.9 KiB
procps-ng x86_64 4.0.4-4.fc41 fedora 1.0 MiB
protobuf x86_64 3.19.6-10.fc41 fedora 3.3 MiB
pyproject-rpm-macros noarch 1.15.1-1.fc41 fedora 109.2 KiB
python-pip-wheel noarch 24.2-2.fc41 copr_base 1.2 MiB
python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB
python3 x86_64 3.13.0-1.fc41 fedora 31.8 KiB
python3-Bottleneck x86_64 1.3.7-8.fc41 copr_base 635.3 KiB
python3-argparse-dataclass noarch 2.0.0-8.fc41 fedora 50.1 KiB
python3-blinker noarch 1.7.0-3.fc41 fedora 107.5 KiB
python3-botocore noarch 1.35.39-1.fc41 copr_base 94.5 MiB
python3-cachetools noarch 5.4.0-6.fc41 copr_base 138.7 KiB
python3-charset-normalizer noarch 3.3.2-6.fc41 copr_base 314.8 KiB
python3-click noarch 8.1.7-6.fc41 fedora 1.1 MiB
python3-configargparse noarch 1.7-5.fc41 fedora 240.6 KiB
python3-dateutil noarch 1:2.8.2-16.fc41 fedora 879.2 KiB
python3-google-api-core noarch 1:2.11.1-10.fc41 fedora 801.1 KiB
python3-google-auth noarch 1:2.35.0-1.fc41 copr_base 1.4 MiB
python3-google-cloud-core noarch 2.3.3-6.fc41 fedora 179.4 KiB
python3-google-crc32c x86_64 1.6.0-1.fc41 copr_base 62.6 KiB
python3-google-resumable-media noarch 2.7.2-1.fc41 copr_base 653.8 KiB
python3-googleapis-common-protos noarch 1.63.0-7.fc41 copr_base 778.1 KiB
python3-grpcio x86_64 1.48.4-41.fc41 fedora 7.4 MiB
python3-grpcio-status noarch 1.48.4-41.fc41 fedora 14.0 KiB
python3-idna noarch 3.9-1.fc41 copr_base 639.8 KiB
python3-iniconfig noarch 1.1.1-24.fc41 copr_base 20.6 KiB
python3-itsdangerous noarch 2.1.2-9.fc41 fedora 95.5 KiB
python3-jinja2 noarch 3.1.4-5.fc41 copr_base 2.9 MiB
python3-jmespath noarch 1.0.1-8.fc41 fedora 149.8 KiB
python3-libs x86_64 3.13.0-1.fc41 fedora 40.3 MiB
python3-markupsafe x86_64 2.1.5-4.fc41 copr_base 61.5 KiB
python3-numexpr x86_64 2.8.5-7.fc41 fedora 574.8 KiB
python3-numpy x86_64 1:1.26.4-8.fc41 fedora 43.8 MiB
python3-numpy-f2py x86_64 1:1.26.4-8.fc41 fedora 2.8 MiB
python3-oauthlib noarch 3.2.2-5.fc41 fedora 993.9 KiB
python3-packaging noarch 24.1-2.fc41 fedora 422.3 KiB
python3-platformdirs noarch 4.2.2-3.fc41 copr_base 168.4 KiB
python3-pluggy noarch 1.5.0-1.fc41 copr_base 193.2 KiB
python3-pooch noarch 1.8.2-3.fc41 fedora 625.5 KiB
python3-protobuf x86_64 3.19.6-10.fc41 fedora 1.9 MiB
python3-pyasn1 noarch 0.6.1-1.fc41 copr_base 881.9 KiB
python3-pyasn1-modules noarch 0.6.1-1.fc41 copr_base 1.7 MiB
python3-pytz noarch 2024.2-1.fc41 copr_base 223.7 KiB
python3-requests noarch 2.32.3-3.fc41 copr_base 485.9 KiB
python3-requests-oauthlib noarch 1.3.1-10.fc41 fedora 133.4 KiB
python3-reretry noarch 0.11.8-11.fc41 fedora 32.1 KiB
python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB
python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB
python3-rsa noarch 4.9-7.fc41 fedora 239.0 KiB
python3-s3transfer noarch 0.10.3-1.fc41 copr_base 619.1 KiB
python3-scipy x86_64 1.11.3-15.fc41 fedora 62.5 MiB
python3-setuptools noarch 69.2.0-9.fc41 copr_base 7.2 MiB
python3-six noarch 1.16.0-24.fc41 copr_base 118.3 KiB
python3-snakemake-interface-common noarch 1.17.3-1.fc41 fedora 97.9 KiB
python3-snakemake-interface-executor-plugins noarch 9.2.0-2.fc41 fedora 147.6 KiB
python3-snakemake-interface-storage-plugins noarch 3.3.0-1.fc41 fedora 117.2 KiB
python3-sysrsync noarch 1.1.1-5.fc41 fedora 28.4 KiB
python3-throttler noarch 1.2.2-11.fc41 fedora 33.9 KiB
python3-urllib3 noarch 2.2.3-5.fc41 copr_base 1.0 MiB
python3-werkzeug noarch 3.0.4-3.fc41 copr_base 1.8 MiB
python3-wrapt x86_64 1.16.0-6.fc41 fedora 197.4 KiB
rav1e-libs x86_64 0.7.1-4.fc41 fedora 3.0 MiB
re2 x86_64 1:20240702-19.fc41 fedora 557.0 KiB
rsvg-pixbuf-loader x86_64 2.59.1-1.fc41 fedora 335.9 KiB
rsync x86_64 3.3.0-3.fc41 fedora 776.4 KiB
shared-mime-info x86_64 2.3-6.fc41 fedora 5.2 MiB
squashfs-tools x86_64 4.6.1-5.fc41 fedora 657.9 KiB
svt-av1-libs x86_64 2.1.0-2.fc41 fedora 7.1 MiB
systemd x86_64 256.7-1.fc41 fedora 17.0 MiB
systemd-pam x86_64 256.7-1.fc41 fedora 1.1 MiB
systemd-rpm-macros noarch 256.7-1.fc41 fedora 10.7 KiB
tcl x86_64 1:8.6.14-2.fc41 fedora 4.2 MiB
tpm2-tss x86_64 4.1.3-3.fc41 fedora 1.6 MiB
tzdata noarch 2024a-9.fc41 fedora 1.7 MiB
urw-base35-bookman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB
urw-base35-c059-fonts noarch 20200910-23.fc41 fedora 1.4 MiB
urw-base35-d050000l-fonts noarch 20200910-23.fc41 fedora 84.3 KiB
urw-base35-fonts noarch 20200910-23.fc41 fedora 5.3 KiB
urw-base35-fonts-common noarch 20200910-23.fc41 fedora 37.4 KiB
urw-base35-gothic-fonts noarch 20200910-23.fc41 fedora 1.2 MiB
urw-base35-nimbus-mono-ps-fonts noarch 20200910-23.fc41 fedora 1.0 MiB
urw-base35-nimbus-roman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB
urw-base35-nimbus-sans-fonts noarch 20200910-23.fc41 fedora 2.4 MiB
urw-base35-p052-fonts noarch 20200910-23.fc41 fedora 1.5 MiB
urw-base35-standard-symbols-ps-fonts noarch 20200910-23.fc41 fedora 64.9 KiB
urw-base35-z003-fonts noarch 20200910-23.fc41 fedora 390.8 KiB
xml-common noarch 0.6.3-65.fc41 fedora 78.4 KiB
yajl x86_64 2.1.0-24.fc41 fedora 90.6 KiB
Transaction Summary:
Installing: 278 packages
Total size of inbound packages is 204 MiB. Need to download 204 MiB.
After this operation, 885 MiB extra will be used (install 885 MiB, remove 0 B).
[ 1/278] python-unversioned-command-0: 100% | 65.4 KiB/s | 10.9 KiB | 00m00s
[ 2/278] python3-snakemake-executor-pl 100% | 172.5 KiB/s | 23.8 KiB | 00m00s
[ 3/278] help2man-0:1.49.3-6.fc41.noar 100% | 688.5 KiB/s | 227.2 KiB | 00m00s
[ 4/278] environment-modules-0:5.4.0-2 100% | 2.1 MiB/s | 731.3 KiB | 00m00s
[ 5/278] python3-snakemake-storage-plu 100% | 292.4 KiB/s | 21.1 KiB | 00m00s
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[ 7/278] python3-snakemake-storage-plu 100% | 136.8 KiB/s | 23.7 KiB | 00m00s
[ 8/278] strace-0:6.10-1.fc41.x86_64 100% | 5.6 MiB/s | 1.4 MiB | 00m00s
[ 9/278] stress-0:1.0.7-5.fc41.x86_64 100% | 148.8 KiB/s | 33.5 KiB | 00m00s
[ 10/278] vim-filesystem-2:9.1.737-1.fc 100% | 88.5 KiB/s | 16.7 KiB | 00m00s
[ 11/278] graphviz-0:12.1.2-1.fc41.x86_ 100% | 34.6 MiB/s | 4.7 MiB | 00m00s
[ 12/278] python3-flask-1:3.0.3-8.fc41. 100% | 16.4 MiB/s | 202.1 KiB | 00m00s
[ 13/278] python3-devel-0:3.13.0-1.fc41 100% | 2.7 MiB/s | 402.5 KiB | 00m00s
[ 14/278] python3-boto3-0:1.35.37-1.fc4 100% | 2.0 MiB/s | 397.0 KiB | 00m00s
[ 15/278] python3-google-cloud-storage- 100% | 1.1 MiB/s | 209.7 KiB | 00m00s
[ 16/278] python3-pytest-mock-0:3.14.0- 100% | 59.0 KiB/s | 41.7 KiB | 00m01s
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[ 18/278] man-db-0:2.12.1-2.fc41.x86_64 100% | 3.5 MiB/s | 1.3 MiB | 00m00s
[ 19/278] less-0:661-2.fc41.x86_64 100% | 184.6 KiB/s | 188.5 KiB | 00m01s
[ 20/278] perl-Getopt-Long-1:2.58-2.fc4 100% | 840.7 KiB/s | 63.9 KiB | 00m00s
[ 21/278] perl-POSIX-0:2.20-511.fc41.x8 100% | 1.2 MiB/s | 97.0 KiB | 00m00s
[ 22/278] perl-Text-ParseWords-0:3.31-5 100% | 212.5 KiB/s | 16.6 KiB | 00m00s
[ 23/278] perl-Text-Tabs+Wrap-0:2024.00 100% | 200.5 KiB/s | 21.9 KiB | 00m00s
[ 24/278] perl-interpreter-4:5.40.0-511 100% | 723.0 KiB/s | 72.3 KiB | 00m00s
[ 25/278] python3-snakemake-interface-c 100% | 386.7 KiB/s | 51.8 KiB | 00m00s
[ 26/278] python3-snakemake-interface-e 100% | 451.4 KiB/s | 65.9 KiB | 00m00s
[ 27/278] python3-reretry-0:0.11.8-11.f 100% | 137.9 KiB/s | 18.6 KiB | 00m00s
[ 28/278] python3-snakemake-interface-s 100% | 428.7 KiB/s | 46.3 KiB | 00m00s
[ 29/278] python3-sysrsync-0:1.1.1-5.fc 100% | 411.8 KiB/s | 27.2 KiB | 00m00s
[ 30/278] python3-requests-oauthlib-0:1 100% | 1.0 MiB/s | 57.9 KiB | 00m00s
[ 31/278] cairo-0:1.18.0-4.fc41.x86_64 100% | 3.7 MiB/s | 709.9 KiB | 00m00s
[ 32/278] expat-0:2.6.3-1.fc41.x86_64 100% | 573.3 KiB/s | 114.1 KiB | 00m00s
[ 33/278] fontconfig-0:2.15.0-8.fc41.x8 100% | 1.2 MiB/s | 269.9 KiB | 00m00s
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[ 35/278] gd-0:2.3.3-17.fc41.x86_64 100% | 598.4 KiB/s | 135.8 KiB | 00m00s
[ 36/278] gdk-pixbuf2-0:2.42.12-6.fc41. 100% | 1.6 MiB/s | 489.0 KiB | 00m00s
[ 37/278] glib2-0:2.82.1-1.fc41.x86_64 100% | 7.1 MiB/s | 3.0 MiB | 00m00s
[ 38/278] gts-0:0.7.6-49.20121130.fc41. 100% | 653.9 KiB/s | 241.3 KiB | 00m00s
[ 39/278] harfbuzz-0:9.0.0-3.fc41.x86_6 100% | 3.6 MiB/s | 1.0 MiB | 00m00s
[ 40/278] lasi-0:1.1.3-14.fc41.x86_64 100% | 1.0 MiB/s | 55.6 KiB | 00m00s
[ 41/278] libX11-0:1.8.10-2.fc41.x86_64 100% | 4.8 MiB/s | 649.9 KiB | 00m00s
[ 42/278] libXrender-0:0.9.11-7.fc41.x8 100% | 257.1 KiB/s | 27.5 KiB | 00m00s
[ 43/278] libgs-0:10.03.1-3.fc41.x86_64 100% | 4.3 MiB/s | 3.4 MiB | 00m01s
[ 44/278] librsvg2-0:2.59.1-1.fc41.x86_ 100% | 1.7 MiB/s | 1.7 MiB | 00m01s
[ 45/278] libwebp-0:1.4.0-4.fc41.x86_64 100% | 277.5 KiB/s | 292.0 KiB | 00m01s
[ 46/278] pango-0:1.54.0-2.fc41.x86_64 100% | 795.3 KiB/s | 347.5 KiB | 00m00s
[ 47/278] poppler-glib-0:24.08.0-1.fc41 100% | 785.2 KiB/s | 191.6 KiB | 00m00s
[ 48/278] urw-base35-fonts-0:20200910-2 100% | 34.2 KiB/s | 10.0 KiB | 00m00s
[ 49/278] python3-jmespath-0:1.0.1-8.fc 100% | 107.5 KiB/s | 58.7 KiB | 00m01s
[ 50/278] python3-blinker-0:1.7.0-3.fc4 100% | 84.2 KiB/s | 35.6 KiB | 00m00s
[ 51/278] python3-itsdangerous-0:2.1.2- 100% | 202.9 KiB/s | 46.5 KiB | 00m00s
[ 52/278] python3-libs-0:3.13.0-1.fc41. 100% | 7.2 MiB/s | 9.1 MiB | 00m01s
[ 53/278] python3-click-0:8.1.7-6.fc41. 100% | 392.5 KiB/s | 241.8 KiB | 00m01s
[ 54/278] python3-google-api-core-1:2.1 100% | 514.1 KiB/s | 205.6 KiB | 00m00s
[ 55/278] python3-google-cloud-core-0:2 100% | 279.1 KiB/s | 72.6 KiB | 00m00s
[ 56/278] python3-dateutil-1:2.8.2-16.f 100% | 885.9 KiB/s | 359.7 KiB | 00m00s
[ 57/278] python3-numexpr-0:2.8.5-7.fc4 100% | 285.4 KiB/s | 167.8 KiB | 00m01s
[ 58/278] libpipeline-0:1.5.7-6.fc41.x8 100% | 68.7 KiB/s | 51.9 KiB | 00m01s
[ 59/278] groff-base-0:1.23.0-7.fc41.x8 100% | 893.9 KiB/s | 1.1 MiB | 00m01s
[ 60/278] perl-Exporter-0:5.78-511.fc41 100% | 34.0 KiB/s | 30.9 KiB | 00m01s
[ 61/278] perl-Pod-Usage-4:2.03-511.fc4 100% | 35.1 KiB/s | 40.0 KiB | 00m01s
[ 62/278] perl-base-0:2.27-511.fc41.noa 100% | 19.2 KiB/s | 16.2 KiB | 00m01s
[ 63/278] perl-constant-0:1.33-512.fc41 100% | 34.0 KiB/s | 23.0 KiB | 00m01s
[ 64/278] python3-numpy-1:1.26.4-8.fc41 100% | 2.3 MiB/s | 7.6 MiB | 00m03s
[ 65/278] perl-overload-0:1.37-511.fc41 100% | 94.4 KiB/s | 45.5 KiB | 00m00s
[ 66/278] perl-Carp-0:1.54-511.fc41.noa 100% | 224.0 KiB/s | 28.9 KiB | 00m00s
[ 67/278] perl-Fcntl-0:1.18-511.fc41.x8 100% | 620.2 KiB/s | 29.8 KiB | 00m00s
[ 68/278] perl-libs-4:5.40.0-511.fc41.x 100% | 2.8 MiB/s | 2.3 MiB | 00m01s
[ 69/278] perl-locale-0:1.12-511.fc41.n 100% | 16.5 KiB/s | 13.6 KiB | 00m01s
[ 70/278] python3-argparse-dataclass-0: 100% | 22.5 KiB/s | 20.1 KiB | 00m01s
[ 71/278] python3-configargparse-0:1.7- 100% | 508.9 KiB/s | 53.4 KiB | 00m00s
[ 72/278] python3-throttler-0:1.2.2-11. 100% | 224.7 KiB/s | 27.6 KiB | 00m00s
[ 73/278] python3-wrapt-0:1.16.0-6.fc41 100% | 1.1 MiB/s | 72.2 KiB | 00m00s
[ 74/278] rsync-0:3.3.0-3.fc41.x86_64 100% | 1.7 MiB/s | 422.7 KiB | 00m00s
[ 75/278] python3-oauthlib-0:3.2.2-5.fc 100% | 940.4 KiB/s | 253.0 KiB | 00m00s
[ 76/278] libXext-0:1.3.6-2.fc41.x86_64 100% | 160.8 KiB/s | 39.1 KiB | 00m00s
[ 77/278] libpng-2:1.6.40-4.fc41.x86_64 100% | 1.3 MiB/s | 120.3 KiB | 00m00s
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[ 79/278] pixman-0:0.43.4-2.fc41.x86_64 100% | 1.8 MiB/s | 294.1 KiB | 00m00s
[ 80/278] default-fonts-core-sans-0:4.1 100% | 210.3 KiB/s | 31.1 KiB | 00m00s
[ 81/278] fonts-filesystem-1:2.0.5-17.f 100% | 73.1 KiB/s | 8.5 KiB | 00m00s
[ 82/278] xml-common-0:0.6.3-65.fc41.no 100% | 390.5 KiB/s | 31.2 KiB | 00m00s
[ 83/278] libXpm-0:3.5.17-4.fc41.x86_64 100% | 536.6 KiB/s | 66.0 KiB | 00m00s
[ 84/278] libavif-0:1.0.4-7.fc41.x86_64 100% | 638.4 KiB/s | 91.3 KiB | 00m00s
[ 85/278] libimagequant-0:4.0.3-5.fc41. 100% | 1.2 MiB/s | 301.2 KiB | 00m00s
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[ 87/278] libtiff-0:4.6.0-6.fc41.x86_64 100% | 872.4 KiB/s | 212.0 KiB | 00m00s
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[ 89/278] gnutls-0:3.8.6-7.fc41.x86_64 100% | 3.2 MiB/s | 1.1 MiB | 00m00s
[ 90/278] netpbm-0:11.02.00-7.fc41.x86_ 100% | 456.9 KiB/s | 184.1 KiB | 00m00s
[ 91/278] graphite2-0:1.3.14-16.fc41.x8 100% | 247.7 KiB/s | 95.1 KiB | 00m00s
[ 92/278] libX11-common-0:1.8.10-2.fc41 100% | 829.3 KiB/s | 175.8 KiB | 00m00s
[ 93/278] adobe-mappings-cmap-0:2023062 100% | 4.3 MiB/s | 2.1 MiB | 00m00s
[ 94/278] adobe-mappings-cmap-deprecate 100% | 244.4 KiB/s | 110.5 KiB | 00m00s
[ 95/278] adobe-mappings-pdf-0:20190401 100% | 1.2 MiB/s | 627.4 KiB | 00m01s
[ 96/278] cups-libs-1:2.4.11-1.fc41.x86 100% | 1.7 MiB/s | 260.9 KiB | 00m00s
[ 97/278] google-droid-sans-fonts-0:202 100% | 5.1 MiB/s | 2.7 MiB | 00m01s
[ 98/278] jbig2dec-libs-0:0.20-5.fc41.x 100% | 166.6 KiB/s | 74.0 KiB | 00m00s
[ 99/278] lcms2-0:2.16-4.fc41.x86_64 100% | 420.3 KiB/s | 180.3 KiB | 00m00s
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[101/278] libijs-0:0.35-23.fc41.x86_64 100% | 383.3 KiB/s | 29.5 KiB | 00m00s
[102/278] libpaper-1:2.1.1-7.fc41.x86_6 100% | 379.3 KiB/s | 27.3 KiB | 00m00s
[103/278] openjpeg-0:2.5.2-4.fc41.x86_6 100% | 1.5 MiB/s | 186.6 KiB | 00m00s
[104/278] cairo-gobject-0:1.18.0-4.fc41 100% | 143.3 KiB/s | 17.3 KiB | 00m00s
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[106/278] libXft-0:2.3.8-7.fc41.x86_64 100% | 607.9 KiB/s | 72.3 KiB | 00m00s
[107/278] libthai-0:0.1.29-9.fc41.x86_6 100% | 1.3 MiB/s | 211.8 KiB | 00m00s
[108/278] poppler-0:24.08.0-1.fc41.x86_ 100% | 3.3 MiB/s | 1.2 MiB | 00m00s
[109/278] urw-base35-bookman-fonts-0:20 100% | 2.2 MiB/s | 846.8 KiB | 00m00s
[110/278] urw-base35-c059-fonts-0:20200 100% | 1.4 MiB/s | 874.0 KiB | 00m01s
[111/278] urw-base35-d050000l-fonts-0:2 100% | 178.5 KiB/s | 75.7 KiB | 00m00s
[112/278] urw-base35-fonts-common-0:202 100% | 61.6 KiB/s | 20.7 KiB | 00m00s
[113/278] urw-base35-gothic-fonts-0:202 100% | 3.6 MiB/s | 642.4 KiB | 00m00s
[114/278] urw-base35-nimbus-mono-ps-fon 100% | 2.9 MiB/s | 794.6 KiB | 00m00s
[115/278] urw-base35-nimbus-roman-fonts 100% | 2.1 MiB/s | 856.0 KiB | 00m00s
[116/278] urw-base35-nimbus-sans-fonts- 100% | 2.9 MiB/s | 1.3 MiB | 00m00s
[117/278] urw-base35-p052-fonts-0:20200 100% | 2.2 MiB/s | 973.1 KiB | 00m00s
[118/278] urw-base35-standard-symbols-p 100% | 198.6 KiB/s | 58.2 KiB | 00m00s
[119/278] urw-base35-z003-fonts-0:20200 100% | 1.4 MiB/s | 275.4 KiB | 00m00s
[120/278] libb2-0:0.98.1-12.fc41.x86_64 100% | 233.4 KiB/s | 25.7 KiB | 00m00s
[121/278] mpdecimal-0:2.5.1-16.fc41.x86 100% | 635.4 KiB/s | 89.0 KiB | 00m00s
[122/278] tzdata-0:2024a-9.fc41.noarch 100% | 3.4 MiB/s | 714.7 KiB | 00m00s
[123/278] python3-grpcio-0:1.48.4-41.fc 100% | 4.9 MiB/s | 2.3 MiB | 00m00s
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[125/278] python3-protobuf-0:3.19.6-10. 100% | 1.2 MiB/s | 414.4 KiB | 00m00s
[126/278] flexiblas-netlib-0:3.4.4-3.fc 100% | 3.5 MiB/s | 3.2 MiB | 00m01s
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[129/278] perl-podlators-1:6.0.2-2.fc41 100% | 2.3 MiB/s | 128.9 KiB | 00m00s
[130/278] perl-Scalar-List-Utils-5:1.66 100% | 1.2 MiB/s | 72.2 KiB | 00m00s
[131/278] perl-mro-0:1.29-511.fc41.x86_ 100% | 564.0 KiB/s | 29.9 KiB | 00m00s
[132/278] perl-overloading-0:0.02-511.f 100% | 378.4 KiB/s | 12.9 KiB | 00m00s
[133/278] perl-DynaLoader-0:1.56-511.fc 100% | 456.3 KiB/s | 26.0 KiB | 00m00s
[134/278] libXau-0:1.0.11-7.fc41.x86_64 100% | 531.5 KiB/s | 31.9 KiB | 00m00s
[135/278] abattis-cantarell-vf-fonts-0: 100% | 1.4 MiB/s | 120.2 KiB | 00m00s
[136/278] google-noto-sans-vf-fonts-0:2 100% | 2.3 MiB/s | 594.1 KiB | 00m00s
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[143/278] nettle-0:3.10-3.fc41.x86_64 100% | 3.2 MiB/s | 428.5 KiB | 00m00s
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[151/278] abseil-cpp-0:20240722.0-1.fc4 100% | 1.1 MiB/s | 714.0 KiB | 00m01s
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[153/278] grpc-data-0:1.48.4-41.fc41.no 100% | 178.1 KiB/s | 21.0 KiB | 00m00s
[154/278] re2-1:20240702-19.fc41.x86_64 100% | 1.8 MiB/s | 218.7 KiB | 00m00s
[155/278] protobuf-0:3.19.6-10.fc41.x86 100% | 3.6 MiB/s | 1.0 MiB | 00m00s
[156/278] flexiblas-0:3.4.4-3.fc41.x86_ 100% | 80.5 KiB/s | 25.3 KiB | 00m00s
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[165/278] perl-IPC-Open3-0:1.22-511.fc4 100% | 253.7 KiB/s | 21.8 KiB | 00m00s
[166/278] perl-Pod-Simple-1:3.45-511.fc 100% | 2.0 MiB/s | 219.0 KiB | 00m00s
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[169/278] perl-vars-0:1.05-511.fc41.noa 100% | 370.2 KiB/s | 13.0 KiB | 00m00s
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[171/278] perl-Term-Cap-0:1.18-511.fc41 100% | 269.1 KiB/s | 22.1 KiB | 00m00s
[172/278] google-noto-fonts-common-0:20 100% | 189.6 KiB/s | 18.0 KiB | 00m00s
[173/278] libvmaf-0:3.0.0-2.fc41.x86_64 100% | 1.4 MiB/s | 193.7 KiB | 00m00s
[174/278] dbus-libs-1:1.14.10-4.fc41.x8 100% | 871.2 KiB/s | 155.1 KiB | 00m00s
[175/278] nss-softokn-0:3.104.0-1.fc41. 100% | 1.7 MiB/s | 412.0 KiB | 00m00s
[176/278] nss-sysinit-0:3.104.0-1.fc41. 100% | 102.7 KiB/s | 19.3 KiB | 00m00s
[177/278] nss-util-0:3.104.0-1.fc41.x86 100% | 505.9 KiB/s | 86.0 KiB | 00m00s
[178/278] perl-File-Path-0:2.18-511.fc4 100% | 77.8 KiB/s | 35.3 KiB | 00m00s
[179/278] perl-IO-Socket-SSL-0:2.089-1. 100% | 338.0 KiB/s | 231.2 KiB | 00m01s
[180/278] libicu-0:74.2-2.fc41.x86_64 100% | 7.5 MiB/s | 10.4 MiB | 00m01s
[181/278] perl-MIME-Base64-0:3.16-511.f 100% | 144.0 KiB/s | 29.9 KiB | 00m00s
[182/278] perl-Mozilla-CA-0:20240730-1. 100% | 42.1 KiB/s | 14.3 KiB | 00m00s
[183/278] openblas-openmp-0:0.3.26-5.fc 100% | 2.8 MiB/s | 5.1 MiB | 00m02s
[184/278] perl-Net-SSLeay-0:1.94-7.fc41 100% | 869.7 KiB/s | 375.7 KiB | 00m00s
[185/278] perl-Socket-4:2.038-511.fc41. 100% | 406.1 KiB/s | 54.8 KiB | 00m00s
[186/278] perl-Time-Local-2:1.350-511.f 100% | 460.3 KiB/s | 34.5 KiB | 00m00s
[187/278] perl-SelectSaver-0:1.02-511.f 100% | 34.1 KiB/s | 11.7 KiB | 00m00s
[188/278] perl-File-stat-0:1.14-511.fc4 100% | 49.3 KiB/s | 17.0 KiB | 00m00s
[189/278] perl-Pod-Escapes-1:1.07-511.f 100% | 65.4 KiB/s | 19.8 KiB | 00m00s
[190/278] perl-if-0:0.61.000-511.fc41.n 100% | 268.5 KiB/s | 14.0 KiB | 00m00s
[191/278] ncurses-0:6.5-2.20240629.fc41 100% | 3.2 MiB/s | 423.8 KiB | 00m00s
[192/278] nss-softokn-freebl-0:3.104.0- 100% | 1.8 MiB/s | 302.1 KiB | 00m00s
[193/278] perl-IO-Socket-IP-0:0.42-512. 100% | 321.7 KiB/s | 41.8 KiB | 00m00s
[194/278] perl-URI-0:5.30-1.fc41.noarch 100% | 1.4 MiB/s | 140.8 KiB | 00m00s
[195/278] perl-AutoLoader-0:5.74-511.fc 100% | 246.5 KiB/s | 21.2 KiB | 00m00s
[196/278] perl-Class-Struct-0:0.68-511. 100% | 275.3 KiB/s | 22.0 KiB | 00m00s
[197/278] perl-Data-Dumper-0:2.189-512. 100% | 939.1 KiB/s | 56.3 KiB | 00m00s
[198/278] perl-MIME-Base32-0:1.303-21.f 100% | 262.5 KiB/s | 20.5 KiB | 00m00s
[199/278] perl-libnet-0:3.15-512.fc41.n 100% | 1.6 MiB/s | 128.5 KiB | 00m00s
[200/278] perl-B-0:1.89-511.fc41.x86_64 100% | 1.6 MiB/s | 176.3 KiB | 00m00s
[201/278] perl-Digest-MD5-0:2.59-5.fc41 100% | 409.2 KiB/s | 36.0 KiB | 00m00s
[202/278] perl-FileHandle-0:2.05-511.fc 100% | 166.2 KiB/s | 15.5 KiB | 00m00s
[203/278] perl-Digest-0:1.20-511.fc41.n 100% | 461.2 KiB/s | 24.9 KiB | 00m00s
[204/278] conmon-2:2.1.12-3.fc41.x86_64 100% | 165.8 KiB/s | 51.1 KiB | 00m00s
[205/278] crun-0:1.17-1.fc41.x86_64 100% | 250.8 KiB/s | 228.8 KiB | 00m01s
[206/278] cryptsetup-0:2.7.5-1.fc41.x86 100% | 450.9 KiB/s | 329.2 KiB | 00m01s
[207/278] fuse-0:2.9.9-22.fc41.x86_64 100% | 228.4 KiB/s | 80.2 KiB | 00m00s
[208/278] fuse3-0:3.16.2-4.fc41.x86_64 100% | 96.3 KiB/s | 58.0 KiB | 00m01s
[209/278] fuse3-libs-0:3.16.2-4.fc41.x8 100% | 161.3 KiB/s | 93.2 KiB | 00m01s
[210/278] libseccomp-0:2.5.5-2.fc41.x86 100% | 93.0 KiB/s | 70.2 KiB | 00m01s
[211/278] squashfs-tools-0:4.6.1-5.fc41 100% | 338.6 KiB/s | 244.1 KiB | 00m01s
[212/278] singularity-ce-0:4.2.1-1.fc41 100% | 16.2 MiB/s | 44.3 MiB | 00m03s
[213/278] yajl-0:2.1.0-24.fc41.x86_64 100% | 116.3 KiB/s | 38.5 KiB | 00m00s
[214/278] cryptsetup-libs-0:2.7.5-1.fc4 100% | 3.3 MiB/s | 532.7 KiB | 00m00s
[215/278] fuse-common-0:3.16.2-4.fc41.x 100% | 197.1 KiB/s | 8.7 KiB | 00m00s
[216/278] lzo-0:2.10-13.fc41.x86_64 100% | 805.4 KiB/s | 66.0 KiB | 00m00s
[217/278] python3-pytest-0:8.3.1-5.fc41 100% | 44.6 MiB/s | 2.0 MiB | 00m00s
[218/278] json-c-0:0.17-4.fc41.x86_64 100% | 602.4 KiB/s | 44.0 KiB | 00m00s
[219/278] python3-iniconfig-0:1.1.1-24. 100% | 2.0 MiB/s | 18.6 KiB | 00m00s
[220/278] python3-pluggy-0:1.5.0-1.fc41 100% | 5.2 MiB/s | 53.7 KiB | 00m00s
[221/278] python3-jinja2-0:3.1.4-5.fc41 100% | 30.7 MiB/s | 471.8 KiB | 00m00s
[222/278] python3-werkzeug-0:3.0.4-3.fc 100% | 31.6 MiB/s | 452.5 KiB | 00m00s
[223/278] graphviz-libs-0:12.1.2-1.fc41 100% | 32.6 MiB/s | 466.7 KiB | 00m00s
[224/278] python3-packaging-0:24.1-2.fc 100% | 1.7 MiB/s | 125.5 KiB | 00m00s
[225/278] python3-requests-0:2.32.3-3.f 100% | 12.2 MiB/s | 149.6 KiB | 00m00s
[226/278] python3-Bottleneck-0:1.3.7-8. 100% | 3.4 MiB/s | 165.5 KiB | 00m00s
[227/278] python3-0:3.13.0-1.fc41.x86_6 100% | 186.4 KiB/s | 27.8 KiB | 00m00s
[228/278] python3-botocore-0:1.35.39-1. 100% | 66.6 MiB/s | 7.0 MiB | 00m00s
[229/278] python3-numpy-f2py-1:1.26.4-8 100% | 341.0 KiB/s | 546.3 KiB | 00m02s
[230/278] python3-pooch-0:1.8.2-3.fc41. 100% | 84.9 KiB/s | 138.6 KiB | 00m02s
[231/278] python-pip-wheel-0:24.2-2.fc4 100% | 36.4 MiB/s | 1.2 MiB | 00m00s
[232/278] python3-googleapis-common-pro 100% | 11.8 MiB/s | 180.6 KiB | 00m00s
[233/278] python3-pytz-0:2024.2-1.fc41. 100% | 359.6 KiB/s | 60.4 KiB | 00m00s
[234/278] python3-six-0:1.16.0-24.fc41. 100% | 572.0 KiB/s | 41.8 KiB | 00m00s
[235/278] python3-google-auth-1:2.35.0- 100% | 1.4 MiB/s | 286.7 KiB | 00m00s
[236/278] python3-google-crc32c-0:1.6.0 100% | 3.6 MiB/s | 33.1 KiB | 00m00s
[237/278] python3-scipy-0:1.11.3-15.fc4 100% | 8.0 MiB/s | 16.1 MiB | 00m02s
[238/278] python3-rsa-0:4.9-7.fc41.noar 100% | 365.7 KiB/s | 80.8 KiB | 00m00s
[239/278] python3-google-resumable-medi 100% | 9.1 MiB/s | 93.6 KiB | 00m00s
[240/278] python3-s3transfer-0:0.10.3-1 100% | 13.1 MiB/s | 147.1 KiB | 00m00s
[241/278] google-crc32c-0:1.1.2-10.fc41 100% | 640.5 KiB/s | 22.4 KiB | 00m00s
[242/278] gpgmepp-0:1.23.2-5.fc41.x86_6 100% | 1.7 MiB/s | 138.1 KiB | 00m00s
[243/278] gpgme-0:1.23.2-5.fc41.x86_64 100% | 1.2 MiB/s | 212.4 KiB | 00m00s
[244/278] libassuan-0:2.5.7-2.fc41.x86_ 100% | 299.4 KiB/s | 67.1 KiB | 00m00s
[245/278] gnupg2-0:2.4.5-3.fc41.x86_64 100% | 7.8 MiB/s | 2.7 MiB | 00m00s
[246/278] libgpg-error-0:1.50-2.fc41.x8 100% | 924.1 KiB/s | 237.5 KiB | 00m00s
[247/278] libgcrypt-0:1.11.0-3.fc41.x86 100% | 2.1 MiB/s | 578.5 KiB | 00m00s
[248/278] libksba-0:1.6.7-2.fc41.x86_64 100% | 1.1 MiB/s | 159.7 KiB | 00m00s
[249/278] npth-0:1.7-2.fc41.x86_64 100% | 167.8 KiB/s | 25.2 KiB | 00m00s
[250/278] tpm2-tss-0:4.1.3-3.fc41.x86_6 100% | 2.6 MiB/s | 411.5 KiB | 00m00s
[251/278] perl-Encode-4:3.21-511.fc41.x 100% | 2.2 MiB/s | 1.1 MiB | 00m00s
[252/278] perl-Getopt-Std-0:1.14-511.fc 100% | 33.8 KiB/s | 15.6 KiB | 00m00s
[253/278] perl-Storable-1:3.32-511.fc41 100% | 245.4 KiB/s | 98.4 KiB | 00m00s
[254/278] openblas-0:0.3.26-5.fc41.x86_ 100% | 1.6 MiB/s | 38.7 KiB | 00m00s
[255/278] rsvg-pixbuf-loader-0:2.59.1-1 100% | 2.1 MiB/s | 164.7 KiB | 00m00s
[256/278] procps-ng-0:4.0.4-4.fc41.x86_ 100% | 2.8 MiB/s | 366.7 KiB | 00m00s
[257/278] device-mapper-libs-0:1.02.201 100% | 1.2 MiB/s | 177.5 KiB | 00m00s
[258/278] device-mapper-0:1.02.201-2.fc 100% | 1.5 MiB/s | 136.8 KiB | 00m00s
[259/278] python3-markupsafe-0:2.1.5-4. 100% | 3.4 MiB/s | 31.2 KiB | 00m00s
[260/278] python3-idna-0:3.9-1.fc41.noa 100% | 10.0 MiB/s | 113.0 KiB | 00m00s
[261/278] python3-urllib3-0:2.2.3-5.fc4 100% | 19.5 MiB/s | 259.6 KiB | 00m00s
[262/278] tcl-1:8.6.14-2.fc41.x86_64 100% | 4.1 MiB/s | 1.1 MiB | 00m00s
[263/278] python3-pyasn1-modules-0:0.6. 100% | 20.6 MiB/s | 316.3 KiB | 00m00s
[264/278] python3-charset-normalizer-0: 100% | 1.1 MiB/s | 99.7 KiB | 00m00s
[265/278] python3-cachetools-0:5.4.0-6. 100% | 272.8 KiB/s | 37.6 KiB | 00m00s
[266/278] systemd-0:256.7-1.fc41.x86_64 100% | 11.5 MiB/s | 5.7 MiB | 00m00s
[267/278] dbus-1:1.14.10-4.fc41.x86_64 100% | 15.5 KiB/s | 7.9 KiB | 00m01s
[268/278] systemd-pam-0:256.7-1.fc41.x8 100% | 807.3 KiB/s | 399.6 KiB | 00m00s
[269/278] python3-pyasn1-0:0.6.1-1.fc41 100% | 16.1 MiB/s | 180.9 KiB | 00m00s
[270/278] dbus-broker-0:36-4.fc41.x86_6 100% | 1.1 MiB/s | 171.7 KiB | 00m00s
[271/278] python3-platformdirs-0:4.2.2- 100% | 3.4 MiB/s | 41.5 KiB | 00m00s
[272/278] dbus-common-1:1.14.10-4.fc41. 100% | 85.2 KiB/s | 14.7 KiB | 00m00s
[273/278] systemd-rpm-macros-0:256.7-1. 100% | 645.2 KiB/s | 33.5 KiB | 00m00s
[274/278] pyproject-rpm-macros-0:1.15.1 100% | 1.0 MiB/s | 43.3 KiB | 00m00s
[275/278] python-rpm-macros-0:3.13-3.fc 100% | 569.9 KiB/s | 17.7 KiB | 00m00s
[276/278] python3-rpm-macros-0:3.13-3.f 100% | 388.9 KiB/s | 12.4 KiB | 00m00s
[277/278] python3-setuptools-0:69.2.0-9 100% | 6.1 MiB/s | 1.4 MiB | 00m00s
[278/278] python3-rpm-generators-0:14-1 100% | 240.2 KiB/s | 29.3 KiB | 00m00s
--------------------------------------------------------------------------------
[278/278] Total 100% | 7.1 MiB/s | 204.0 MiB | 00m29s
Running transaction
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[ 2/280] Prepare transaction 100% | 1.2 KiB/s | 278.0 B | 00m00s
[ 3/280] Installing nspr-0:4.35.0-29.f 100% | 104.9 MiB/s | 322.3 KiB | 00m00s
[ 4/280] Installing libpng-2:1.6.40-4. 100% | 120.6 MiB/s | 247.1 KiB | 00m00s
[ 5/280] Installing libgpg-error-0:1.5 100% | 145.7 MiB/s | 895.4 KiB | 00m00s
[ 6/280] Installing libjpeg-turbo-0:3. 100% | 253.5 MiB/s | 778.7 KiB | 00m00s
[ 7/280] Installing fonts-filesystem-1 100% | 769.5 KiB/s | 788.0 B | 00m00s
[ 8/280] Installing urw-base35-fonts-c 100% | 37.5 MiB/s | 38.4 KiB | 00m00s
[ 9/280] Installing nss-util-0:3.104.0 100% | 100.6 MiB/s | 206.1 KiB | 00m00s
[ 10/280] Installing libseccomp-0:2.5.5 100% | 171.1 MiB/s | 175.2 KiB | 00m00s
[ 11/280] Installing libwebp-0:1.4.0-4. 100% | 161.5 MiB/s | 826.8 KiB | 00m00s
[ 12/280] Installing expat-0:2.6.3-1.fc 100% | 143.4 MiB/s | 293.6 KiB | 00m00s
[ 13/280] Installing libassuan-0:2.5.7- 100% | 80.9 MiB/s | 165.6 KiB | 00m00s
[ 14/280] Installing python-rpm-macros- 100% | 22.3 MiB/s | 22.8 KiB | 00m00s
[ 15/280] Installing libgfortran-0:14.2 100% | 234.2 MiB/s | 3.0 MiB | 00m00s
[ 16/280] Installing tzdata-0:2024a-9.f 100% | 28.1 MiB/s | 1.9 MiB | 00m00s
[ 17/280] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s
[ 18/280] Installing json-c-0:0.17-4.fc 100% | 81.7 MiB/s | 83.6 KiB | 00m00s
[ 19/280] Installing fuse-common-0:3.16 100% | 0.0 B/s | 292.0 B | 00m00s
[ 20/280] Installing fuse3-libs-0:3.16. 100% | 138.0 MiB/s | 282.6 KiB | 00m00s
[ 21/280] Installing abseil-cpp-0:20240 100% | 131.3 MiB/s | 2.6 MiB | 00m00s
[ 22/280] Installing libICE-0:1.1.1-4.f 100% | 178.3 MiB/s | 182.6 KiB | 00m00s
[ 23/280] Installing openjpeg-0:2.5.2-4 100% | 145.7 MiB/s | 447.6 KiB | 00m00s
[ 24/280] Installing lcms2-0:2.16-4.fc4 100% | 138.8 MiB/s | 426.5 KiB | 00m00s
[ 25/280] Installing adobe-mappings-cma 100% | 215.2 MiB/s | 14.4 MiB | 00m00s
[ 26/280] Installing groff-base-0:1.23. 100% | 117.4 MiB/s | 3.9 MiB | 00m00s
[ 27/280] Installing less-0:661-2.fc41. 100% | 133.0 MiB/s | 408.6 KiB | 00m00s
[ 28/280] Installing adobe-mappings-cma 100% | 190.5 MiB/s | 585.2 KiB | 00m00s
[ 29/280] Installing libSM-0:1.2.4-4.fc 100% | 96.3 MiB/s | 98.7 KiB | 00m00s
[ 30/280] Installing fuse3-0:3.16.2-4.f 100% | 62.7 MiB/s | 128.4 KiB | 00m00s
[ 31/280] Installing fuse-0:2.9.9-22.fc 100% | 8.3 MiB/s | 222.1 KiB | 00m00s
[ 32/280] Installing tpm2-tss-0:4.1.3-3 100% | 158.1 MiB/s | 1.6 MiB | 00m00s
[ 33/280] Installing pyproject-rpm-macr 100% | 108.6 MiB/s | 111.2 KiB | 00m00s
[ 34/280] Installing graphviz-libs-0:12 100% | 200.9 MiB/s | 1.2 MiB | 00m00s
[ 35/280] Installing nss-softokn-freebl 100% | 191.9 MiB/s | 785.8 KiB | 00m00s
[ 36/280] Installing nss-softokn-0:3.10 100% | 269.0 MiB/s | 1.9 MiB | 00m00s
[ 37/280] Installing nss-sysinit-0:3.10 100% | 22.7 MiB/s | 23.3 KiB | 00m00s
[ 38/280] Installing nss-0:3.104.0-1.fc 100% | 110.7 MiB/s | 1.9 MiB | 00m00s
[ 39/280] Installing urw-base35-bookman 100% | 68.2 MiB/s | 1.4 MiB | 00m00s
[ 40/280] Installing urw-base35-c059-fo 100% | 99.7 MiB/s | 1.4 MiB | 00m00s
[ 41/280] Installing urw-base35-d050000 100% | 8.3 MiB/s | 85.4 KiB | 00m00s
[ 42/280] Installing urw-base35-gothic- 100% | 89.4 MiB/s | 1.2 MiB | 00m00s
[ 43/280] Installing urw-base35-nimbus- 100% | 80.9 MiB/s | 1.1 MiB | 00m00s
[ 44/280] Installing urw-base35-nimbus- 100% | 91.1 MiB/s | 1.4 MiB | 00m00s
[ 45/280] Installing urw-base35-nimbus- 100% | 140.8 MiB/s | 2.4 MiB | 00m00s
[ 46/280] Installing urw-base35-p052-fo 100% | 106.2 MiB/s | 1.5 MiB | 00m00s
[ 47/280] Installing urw-base35-standar 100% | 6.4 MiB/s | 66.0 KiB | 00m00s
[ 48/280] Installing urw-base35-z003-fo 100% | 34.8 MiB/s | 391.8 KiB | 00m00s
[ 49/280] Installing urw-base35-fonts-0 100% | 5.5 MiB/s | 5.6 KiB | 00m00s
[ 50/280] Installing google-droid-sans- 100% | 260.8 MiB/s | 6.3 MiB | 00m00s
[ 51/280] Installing abattis-cantarell- 100% | 94.9 MiB/s | 194.4 KiB | 00m00s
[ 52/280] Installing libgcrypt-0:1.11.0 100% | 257.0 MiB/s | 1.5 MiB | 00m00s
[ 53/280] Installing libksba-0:1.6.7-2. 100% | 195.8 MiB/s | 401.0 KiB | 00m00s
[ 54/280] Installing dbus-common-1:1.14 100% | 410.6 KiB/s | 13.6 KiB | 00m00s
[ 55/280] Installing dbus-broker-0:36-4 100% | 31.4 MiB/s | 385.3 KiB | 00m00s
[ 56/280] Installing dbus-1:1.14.10-4.f 100% | 0.0 B/s | 124.0 B | 00m00s
[ 57/280] Installing systemd-pam-0:256. 100% | 155.0 MiB/s | 1.1 MiB | 00m00s
[ 58/280] Installing systemd-0:256.7-1. 100% | 60.8 MiB/s | 17.1 MiB | 00m00s
[ 59/280] Installing device-mapper-libs 100% | 136.7 MiB/s | 419.8 KiB | 00m00s
[ 60/280] Installing device-mapper-0:1. 100% | 115.9 MiB/s | 356.1 KiB | 00m00s
[ 61/280] Installing cryptsetup-libs-0: 100% | 234.4 MiB/s | 2.3 MiB | 00m00s
[ 62/280] Installing cryptsetup-0:2.7.5 100% | 102.2 MiB/s | 732.6 KiB | 00m00s
[ 63/280] Installing tcl-1:8.6.14-2.fc4 100% | 183.7 MiB/s | 4.2 MiB | 00m00s
[ 64/280] Installing procps-ng-0:4.0.4- 100% | 130.1 MiB/s | 1.0 MiB | 00m00s
[ 65/280] Installing openblas-0:0.3.26- 100% | 95.5 MiB/s | 97.8 KiB | 00m00s
[ 66/280] Installing openblas-openmp-0: 100% | 452.5 MiB/s | 39.4 MiB | 00m00s
[ 67/280] Installing npth-0:1.7-2.fc41. 100% | 49.5 MiB/s | 50.7 KiB | 00m00s
[ 68/280] Installing google-crc32c-0:1. 100% | 24.9 MiB/s | 25.5 KiB | 00m00s
[ 69/280] Installing python-pip-wheel-0 100% | 413.9 MiB/s | 1.2 MiB | 00m00s
[ 70/280] Installing lzo-0:2.10-13.fc41 100% | 164.5 MiB/s | 168.5 KiB | 00m00s
[ 71/280] Installing squashfs-tools-0:4 100% | 161.5 MiB/s | 661.6 KiB | 00m00s
[ 72/280] Installing yajl-0:2.1.0-24.fc 100% | 45.5 MiB/s | 93.1 KiB | 00m00s
[ 73/280] Installing crun-0:1.17-1.fc41 100% | 169.5 MiB/s | 520.8 KiB | 00m00s
[ 74/280] Installing ncurses-0:6.5-2.20 100% | 154.8 MiB/s | 633.9 KiB | 00m00s
[ 75/280] Installing perl-Digest-0:1.20 100% | 36.2 MiB/s | 37.1 KiB | 00m00s
[ 76/280] Installing perl-B-0:1.89-511. 100% | 163.2 MiB/s | 501.3 KiB | 00m00s
[ 77/280] Installing perl-FileHandle-0: 100% | 0.0 B/s | 9.8 KiB | 00m00s
[ 78/280] Installing perl-Digest-MD5-0: 100% | 60.2 MiB/s | 61.7 KiB | 00m00s
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warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[280/280] Installing strace-0:6.10-1.fc 100% | 2.8 MiB/s | 2.5 MiB | 00m01s
Warning: skipped PGP checks for 30 packages from repository: copr_base
Complete!
Finish: build setup for snakemake-8.18.2-4.fc41.src.rpm
Start: rpmbuild snakemake-8.18.2-4.fc41.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1728777600
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.2boM5Z
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ test -d /builddir/build/BUILD/snakemake-8.18.2-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/snakemake-8.18.2-build
+ /usr/bin/rm -rf /builddir/build/BUILD/snakemake-8.18.2-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/SPECPARTS
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.PU1ddg
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ rm -rf snakemake-8.18.2
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-8.18.2.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd snakemake-8.18.2
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/3138.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ '[' -z sP ']'
+ shebang_flags=-kasP
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP .
recursedown('.')
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recursedown('./tests/test_temp_expand/expected-results')
recursedown('./tests/test_template_engine')
recursedown('./tests/test_template_engine/expected-results')
recursedown('./tests/test_tes')
recursedown('./tests/test_tes/expected-results')
recursedown('./tests/test_threads')
recursedown('./tests/test_threads/expected-results')
recursedown('./tests/test_threads0')
recursedown('./tests/test_threads0/expected-results')
recursedown('./tests/test_tibanna')
recursedown('./tests/test_tibanna/expected-results')
recursedown('./tests/test_tibanna/scripts')
recursedown('./tests/test_tmpdir')
recursedown('./tests/test_tmpdir/expected-results')
recursedown('./tests/test_touch')
recursedown('./tests/test_touch/expected-results')
recursedown('./tests/test_touch_pipeline_with_temp_dir')
recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results')
recursedown('./tests/test_touch_remote_prefix')
recursedown('./tests/test_touch_remote_prefix/expected-results')
recursedown('./tests/test_touch_with_directories')
recursedown('./tests/test_touch_with_directories/expected-results')
recursedown('./tests/test_unpack_dict')
recursedown('./tests/test_unpack_dict/expected-results')
recursedown('./tests/test_unpack_list')
recursedown('./tests/test_unpack_list/expected-results')
recursedown('./tests/test_until')
recursedown('./tests/test_until/expected-results')
recursedown('./tests/test_update_config')
recursedown('./tests/test_update_config/expected-results')
recursedown('./tests/test_update_flag')
recursedown('./tests/test_update_flag/expected-results')
recursedown('./tests/test_url_include')
recursedown('./tests/test_url_include/expected-results')
recursedown('./tests/test_use_rule_same_module')
recursedown('./tests/test_use_rule_same_module/expected-results')
recursedown('./tests/test_validate')
recursedown('./tests/test_validate/expected-results')
recursedown('./tests/test_wildcard_count_ambiguity')
recursedown('./tests/test_wildcard_count_ambiguity/expected-results')
recursedown('./tests/test_wildcard_keyword')
recursedown('./tests/test_wildcard_keyword/expected-results')
recursedown('./tests/test_workflow_profile')
recursedown('./tests/test_workflow_profile/dummy-general-profile')
recursedown('./tests/test_workflow_profile/expected-results')
recursedown('./tests/test_workflow_profile/workflow')
recursedown('./tests/test_workflow_profile/workflow/profiles')
recursedown('./tests/test_workflow_profile/workflow/profiles/default')
recursedown('./tests/test_wrapper')
recursedown('./tests/test_wrapper/expected-results')
recursedown('./tests/test_xrootd')
recursedown('./tests/test_yaml_config')
recursedown('./tests/test_yaml_config/expected-results')
+ sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py
+ for editor in nano vim
+ cp -vp misc/nano/README.md README-nano.md
+ for editor in nano vim
+ cp -vp misc/vim/README.md README-vim.md
+ RPM_EC=0
++ jobs -p
+ exit 0
'misc/nano/README.md' -> 'README-nano.md'
'misc/vim/README.md' -> 'README-vim.md'
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.JwjMlC
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ cd snakemake-8.18.2
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(packaging)'
+ echo 'python3dist(pip) >= 19'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(tomli) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ echo -n
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ RPM_TOXENV=py313
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires -x reports,messaging
Handling setuptools>=42 from build-system.requires
Requirement satisfied: setuptools>=42
(installed: setuptools 69.2.0)
Handling tomli; python_version < "3.11" from build-system.requires
Ignoring alien requirement: tomli; python_version < "3.11"
running egg_info
creating snakemake.egg-info
writing snakemake.egg-info/PKG-INFO
writing dependency_links to snakemake.egg-info/dependency_links.txt
writing entry points to snakemake.egg-info/entry_points.txt
writing requirements to snakemake.egg-info/requires.txt
writing top-level names to snakemake.egg-info/top_level.txt
writing manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file 'snakemake.egg-info/SOURCES.txt'
Handling wheel from get_requires_for_build_wheel
Requirement not satisfied: wheel
Exiting dependency generation pass: get_requires_for_build_wheel
+ cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires
+ rm -rfv '*.dist-info/'
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.buildreqs.nosrc.rpm
INFO: Going to install missing dynamic buildrequires
Updating and loading repositories:
updates 100% | 842.2 KiB/s | 28.6 KiB | 00m00s
fedora 100% | 740.8 KiB/s | 25.9 KiB | 00m00s
Copr repository 100% | 49.6 KiB/s | 1.5 KiB | 00m00s
Repositories loaded.
Package "environment-modules-5.4.0-2.fc41.x86_64" is already installed.
Package "graphviz-12.1.2-1.fc41.x86_64" is already installed.
Package "help2man-1.49.3-6.fc41.noarch" is already installed.
Package "pyproject-rpm-macros-1.15.1-1.fc41.noarch" is already installed.
Package "python-unversioned-command-3.13.0-1.fc41.noarch" is already installed.
Package "python3-devel-3.13.0-1.fc41.x86_64" is already installed.
Package "python3-boto3-1.35.37-1.fc41.noarch" is already installed.
Package "python3-flask-1:3.0.3-8.fc41.noarch" is already installed.
Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed.
Package "python3-packaging-24.1-2.fc41.noarch" is already installed.
Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed.
Package "python3-pytest-8.3.1-5.fc41.noarch" is already installed.
Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed.
Package "python3-setuptools-69.2.0-9.fc41.noarch" is already installed.
Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed.
Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc41.noarch" is already installed.
Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed.
Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc41.noarch" is already installed.
Package "strace-6.10-1.fc41.x86_64" is already installed.
Package "stress-1.0.7-5.fc41.x86_64" is already installed.
Package "vim-filesystem-2:9.1.737-1.fc41.noarch" is already installed.
Package Arch Version Repository Size
Installing:
python3-pip noarch 24.2-2.fc41 copr_base 11.4 MiB
python3-wheel noarch 1:0.43.0-4.fc41 fedora 516.1 KiB
Transaction Summary:
Installing: 2 packages
Total size of inbound packages is 3 MiB. Need to download 3 MiB.
After this operation, 12 MiB extra will be used (install 12 MiB, remove 0 B).
[1/2] python3-pip-0:24.2-2.fc41.noarch 100% | 27.5 MiB/s | 2.5 MiB | 00m00s
[2/2] python3-wheel-1:0.43.0-4.fc41.noa 100% | 334.9 KiB/s | 165.8 KiB | 00m00s
--------------------------------------------------------------------------------
[2/2] Total 100% | 5.1 MiB/s | 2.7 MiB | 00m01s
Running transaction
[1/4] Verify package files 100% | 181.0 B/s | 2.0 B | 00m00s
[2/4] Prepare transaction 100% | 40.0 B/s | 2.0 B | 00m00s
[3/4] Installing python3-wheel-1:0.43.0 100% | 58.1 MiB/s | 535.1 KiB | 00m00s
warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[4/4] Installing python3-pip-0:24.2-2.f 100% | 71.5 MiB/s | 11.7 MiB | 00m00s
Warning: skipped PGP checks for 1 package from repository: copr_base
Complete!
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1728777600
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.whxpv4
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ cd snakemake-8.18.2
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(packaging)'
+ echo 'python3dist(pip) >= 19'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(tomli) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ echo -n
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ RPM_TOXENV=py313
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires -x reports,messaging
Handling setuptools>=42 from build-system.requires
Requirement satisfied: setuptools>=42
(installed: setuptools 69.2.0)
Handling tomli; python_version < "3.11" from build-system.requires
Ignoring alien requirement: tomli; python_version < "3.11"
running egg_info
writing snakemake.egg-info/PKG-INFO
writing dependency_links to snakemake.egg-info/dependency_links.txt
writing entry points to snakemake.egg-info/entry_points.txt
writing requirements to snakemake.egg-info/requires.txt
writing top-level names to snakemake.egg-info/top_level.txt
reading manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file 'snakemake.egg-info/SOURCES.txt'
Handling wheel from get_requires_for_build_wheel
Requirement satisfied: wheel
(installed: wheel 0.43.0)
running dist_info
writing snakemake.egg-info/PKG-INFO
writing dependency_links to snakemake.egg-info/dependency_links.txt
writing entry points to snakemake.egg-info/entry_points.txt
writing requirements to snakemake.egg-info/requires.txt
writing top-level names to snakemake.egg-info/top_level.txt
reading manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file 'snakemake.egg-info/SOURCES.txt'
creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info'
Handling appdirs from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: appdirs
Handling immutables from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: immutables
Handling configargparse from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: configargparse
(installed: configargparse 1.7)
Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: connection-pool >=0.0.3
Handling datrie from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: datrie
Handling docutils from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: docutils
Handling gitpython from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: gitpython
Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: humanfriendly
Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: jinja2 <4.0,>=3.0
(installed: jinja2 3.1.4)
Handling jsonschema from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: jsonschema
Handling nbformat from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: nbformat
Handling packaging from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: packaging
(installed: packaging 24.1)
Handling psutil from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: psutil
Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: pulp <2.10,>=2.3.1
Handling pyyaml from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: pyyaml
Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: requests <3.0,>=2.8.1
(installed: requests 2.32.3)
Handling reretry from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: reretry
(installed: reretry 0.11.8)
Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: smart-open <8.0,>=4.0
Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0
(installed: snakemake-interface-executor-plugins 9.2.0)
Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0
(installed: snakemake-interface-common 1.17.3)
Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3
(installed: snakemake-interface-storage-plugins 3.3.0)
Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0
Handling stopit from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: stopit
Handling tabulate from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: tabulate
Handling throttler from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: throttler
(installed: throttler 1.2.2)
Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: toposort <2.0,>=1.10
Handling wrapt from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: wrapt
(installed: wrapt 1.16.0)
Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: yte <2.0,>=1.5.1
Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: dpath <3.0.0,>=2.1.6
Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: conda-inject <2.0,>=1.3.1
Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: slack-sdk ; extra == 'messaging'
Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake)
Ignoring alien requirement: eido ; extra == 'pep'
Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake)
Ignoring alien requirement: peppy ; extra == 'pep'
Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake)
Requirement not satisfied: pygments ; extra == 'reports'
+ cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires
+ rm -rfv snakemake-8.18.2.dist-info/
removed 'snakemake-8.18.2.dist-info/entry_points.txt'
removed 'snakemake-8.18.2.dist-info/top_level.txt'
removed 'snakemake-8.18.2.dist-info/METADATA'
removed 'snakemake-8.18.2.dist-info/LICENSE.md'
removed directory 'snakemake-8.18.2.dist-info/'
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.buildreqs.nosrc.rpm
INFO: Going to install missing dynamic buildrequires
Updating and loading repositories:
updates 100% | 1.1 MiB/s | 28.6 KiB | 00m00s
fedora 100% | 1.1 MiB/s | 25.9 KiB | 00m00s
Copr repository 100% | 54.9 KiB/s | 1.5 KiB | 00m00s
Repositories loaded.
Package "environment-modules-5.4.0-2.fc41.x86_64" is already installed.
Package "graphviz-12.1.2-1.fc41.x86_64" is already installed.
Package "help2man-1.49.3-6.fc41.noarch" is already installed.
Package "pyproject-rpm-macros-1.15.1-1.fc41.noarch" is already installed.
Package "python-unversioned-command-3.13.0-1.fc41.noarch" is already installed.
Package "python3-devel-3.13.0-1.fc41.x86_64" is already installed.
Package "python3-boto3-1.35.37-1.fc41.noarch" is already installed.
Package "python3-configargparse-1.7-5.fc41.noarch" is already installed.
Package "python3-flask-1:3.0.3-8.fc41.noarch" is already installed.
Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed.
Package "python3-packaging-24.1-2.fc41.noarch" is already installed.
Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed.
Package "python3-pip-24.2-2.fc41.noarch" is already installed.
Package "python3-pytest-8.3.1-5.fc41.noarch" is already installed.
Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed.
Package "python3-reretry-0.11.8-11.fc41.noarch" is already installed.
Package "python3-setuptools-69.2.0-9.fc41.noarch" is already installed.
Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed.
Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc41.noarch" is already installed.
Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed.
Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc41.noarch" is already installed.
Package "python3-throttler-1.2.2-11.fc41.noarch" is already installed.
Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed.
Package "python3-wrapt-1.16.0-6.fc41.x86_64" is already installed.
Package "strace-6.10-1.fc41.x86_64" is already installed.
Package "stress-1.0.7-5.fc41.x86_64" is already installed.
Package "vim-filesystem-2:9.1.737-1.fc41.noarch" is already installed.
Package Arch Version Repository Size
Installing:
python3-GitPython noarch 3.1.43-1.fc41 copr_base 1.8 MiB
python3-appdirs noarch 1.4.4-25.fc41 copr_base 68.7 KiB
python3-conda-inject noarch 1.3.2-3.fc41 fedora 23.6 KiB
python3-connection_pool noarch 0.0.3-13.fc41 fedora 21.2 KiB
python3-datrie x86_64 0.8.2-27.fc41 fedora 444.7 KiB
python3-docutils noarch 0.21.2-1.fc41 copr_base 4.9 MiB
python3-dpath noarch 2.2.0-2.fc41 fedora 93.3 KiB
python3-humanfriendly noarch 10.0-13.fc41 fedora 544.8 KiB
python3-immutables x86_64 0.20-7.fc41 fedora 185.9 KiB
python3-jsonschema noarch 4.19.1-6.fc41 copr_base 848.8 KiB
python3-nbformat noarch 5.9.2-6.fc41 copr_base 541.7 KiB
python3-psutil x86_64 5.9.8-5.fc41 copr_base 1.4 MiB
python3-pulp noarch 2.8.0-6.fc41 fedora 1.0 MiB
python3-pygments noarch 2.18.0-3.fc41 copr_base 10.6 MiB
python3-pyyaml x86_64 6.0.1-18.fc41 fedora 791.1 KiB
python3-slackclient noarch 3.33.1-1.fc41 copr_base 2.9 MiB
python3-smart_open noarch 7.0.5-1.fc41 copr_base 494.1 KiB
python3-snakemake-interface-report-plugins noarch 1.0.0-5.fc41 fedora 31.1 KiB
python3-stopit noarch 1.1.2-12.fc41 fedora 65.2 KiB
python3-tabulate noarch 0.9.0-10.fc41 fedora 342.0 KiB
python3-toposort noarch 1.10-12.fc41 fedora 28.5 KiB
python3-yte noarch 1.5.4-6.fc41 fedora 61.0 KiB
Installing dependencies:
git-core x86_64 2.47.0-1.fc41 fedora 22.5 MiB
libcbor x86_64 0.11.0-2.fc41 fedora 73.9 KiB
libedit x86_64 3.1-53.20240808cvs.fc41 fedora 244.1 KiB
libfido2 x86_64 1.15.0-2.fc41 fedora 238.2 KiB
libyaml x86_64 0.2.5-15.fc41 fedora 134.4 KiB
openssh x86_64 9.8p1-3.fc41.1 fedora 1.8 MiB
openssh-clients x86_64 9.8p1-3.fc41.1 fedora 2.6 MiB
python3-attrs noarch 24.2.0-1.fc41 copr_base 396.1 KiB
python3-boto noarch 2.49.0-23.fc41 fedora 9.6 MiB
python3-fastjsonschema noarch 2.20.0-1.fc41 copr_base 190.8 KiB
python3-gitdb noarch 4.0.11-1.fc41 copr_base 504.2 KiB
python3-jsonschema-specifications noarch 2023.11.2-6.fc41 fedora 45.8 KiB
python3-jupyter-core noarch 5.7.2-4.fc41 copr_base 198.7 KiB
python3-plac noarch 1.4.3-4.fc41 fedora 230.2 KiB
python3-referencing noarch 0.35.1-3.fc41 fedora 326.0 KiB
python3-rpds-py x86_64 0.19.1-1.fc41 fedora 684.2 KiB
python3-smmap noarch 5.0.1-1.fc41 copr_base 200.0 KiB
python3-traitlets noarch 5.14.3-3.fc41 fedora 966.9 KiB
python3-zombie-imp noarch 0.0.2-7.fc41 fedora 58.4 KiB
Transaction Summary:
Installing: 41 packages
Total size of inbound packages is 15 MiB. Need to download 15 MiB.
After this operation, 68 MiB extra will be used (install 68 MiB, remove 0 B).
[ 1/41] python3-snakemake-interface-rep 100% | 397.7 KiB/s | 26.2 KiB | 00m00s
[ 2/41] python3-conda-inject-0:1.3.2-3. 100% | 253.5 KiB/s | 18.8 KiB | 00m00s
[ 3/41] python3-yte-0:1.5.4-6.fc41.noar 100% | 473.7 KiB/s | 36.0 KiB | 00m00s
[ 4/41] python3-dpath-0:2.2.0-2.fc41.no 100% | 1.5 MiB/s | 42.9 KiB | 00m00s
[ 5/41] python3-toposort-0:1.10-12.fc41 100% | 1.1 MiB/s | 20.3 KiB | 00m00s
[ 6/41] python3-pulp-0:2.8.0-6.fc41.noa 100% | 3.5 MiB/s | 248.1 KiB | 00m00s
[ 7/41] python3-connection_pool-0:0.0.3 100% | 1.0 MiB/s | 17.1 KiB | 00m00s
[ 8/41] python3-datrie-0:0.8.2-27.fc41. 100% | 6.7 MiB/s | 158.1 KiB | 00m00s
[ 9/41] python3-appdirs-0:1.4.4-25.fc41 100% | 312.9 KiB/s | 24.1 KiB | 00m00s
[10/41] python3-docutils-0:0.21.2-1.fc4 100% | 19.5 MiB/s | 1.0 MiB | 00m00s
[11/41] python3-GitPython-0:3.1.43-1.fc 100% | 7.7 MiB/s | 385.0 KiB | 00m00s
[12/41] python3-smart_open-0:7.0.5-1.fc 100% | 722.0 KiB/s | 119.1 KiB | 00m00s
[13/41] python3-humanfriendly-0:10.0-13 100% | 5.7 MiB/s | 146.9 KiB | 00m00s
[14/41] python3-immutables-0:0.20-7.fc4 100% | 2.1 MiB/s | 64.1 KiB | 00m00s
[15/41] python3-nbformat-0:5.9.2-6.fc41 100% | 1.1 MiB/s | 123.4 KiB | 00m00s
[16/41] python3-pygments-0:2.18.0-3.fc4 100% | 51.5 MiB/s | 2.4 MiB | 00m00s
[17/41] python3-psutil-0:5.9.8-5.fc41.x 100% | 1.4 MiB/s | 265.9 KiB | 00m00s
[18/41] python3-pyyaml-0:6.0.1-18.fc41. 100% | 7.3 MiB/s | 231.6 KiB | 00m00s
[19/41] python3-stopit-0:1.1.2-12.fc41. 100% | 1.6 MiB/s | 25.6 KiB | 00m00s
[20/41] python3-jsonschema-0:4.19.1-6.f 100% | 791.7 KiB/s | 188.4 KiB | 00m00s
[21/41] python3-tabulate-0:0.9.0-10.fc4 100% | 3.7 MiB/s | 71.8 KiB | 00m00s
[22/41] python3-plac-0:1.4.3-4.fc41.noa 100% | 2.5 MiB/s | 62.6 KiB | 00m00s
[23/41] python3-boto-0:2.49.0-23.fc41.n 100% | 28.6 MiB/s | 1.9 MiB | 00m00s
[24/41] python3-slackclient-0:3.33.1-1. 100% | 4.1 MiB/s | 504.8 KiB | 00m00s
[25/41] python3-jsonschema-specificatio 100% | 1.6 MiB/s | 27.0 KiB | 00m00s
[26/41] python3-referencing-0:0.35.1-3. 100% | 4.4 MiB/s | 84.9 KiB | 00m00s
[27/41] python3-traitlets-0:5.14.3-3.fc 100% | 8.0 MiB/s | 214.0 KiB | 00m00s
[28/41] git-core-0:2.47.0-1.fc41.x86_64 100% | 39.2 MiB/s | 4.8 MiB | 00m00s
[29/41] libyaml-0:0.2.5-15.fc41.x86_64 100% | 3.6 MiB/s | 59.4 KiB | 00m00s
[30/41] python3-rpds-py-0:0.19.1-1.fc41 100% | 3.7 MiB/s | 287.9 KiB | 00m00s
[31/41] openssh-clients-0:9.8p1-3.fc41. 100% | 32.9 MiB/s | 741.7 KiB | 00m00s
[32/41] libedit-0:3.1-53.20240808cvs.fc 100% | 6.1 MiB/s | 105.6 KiB | 00m00s
[33/41] openssh-0:9.8p1-3.fc41.1.x86_64 100% | 21.3 MiB/s | 414.3 KiB | 00m00s
[34/41] libfido2-0:1.15.0-2.fc41.x86_64 100% | 4.6 MiB/s | 98.1 KiB | 00m00s
[35/41] libcbor-0:0.11.0-2.fc41.x86_64 100% | 1.9 MiB/s | 33.1 KiB | 00m00s
[36/41] python3-attrs-0:24.2.0-1.fc41.n 100% | 9.7 MiB/s | 118.6 KiB | 00m00s
[37/41] python3-fastjsonschema-0:2.20.0 100% | 855.7 KiB/s | 59.0 KiB | 00m00s
[38/41] python3-jupyter-core-0:5.7.2-4. 100% | 1.0 MiB/s | 71.9 KiB | 00m00s
[39/41] python3-zombie-imp-0:0.0.2-7.fc 100% | 1.5 MiB/s | 29.5 KiB | 00m00s
[40/41] python3-gitdb-0:4.0.11-1.fc41.n 100% | 1.5 MiB/s | 130.9 KiB | 00m00s
[41/41] python3-smmap-0:5.0.1-1.fc41.no 100% | 928.1 KiB/s | 56.6 KiB | 00m00s
--------------------------------------------------------------------------------
[41/41] Total 100% | 18.3 MiB/s | 15.2 MiB | 00m01s
Running transaction
[ 1/43] Verify package files 100% | 706.0 B/s | 41.0 B | 00m00s
[ 2/43] Prepare transaction 100% | 386.0 B/s | 41.0 B | 00m00s
[ 3/43] Installing python3-attrs-0:24.2 100% | 80.2 MiB/s | 410.7 KiB | 00m00s
[ 4/43] Installing python3-traitlets-0: 100% | 137.3 MiB/s | 984.0 KiB | 00m00s
[ 5/43] Installing python3-rpds-py-0:0. 100% | 168.0 MiB/s | 688.1 KiB | 00m00s
[ 6/43] Installing python3-referencing- 100% | 81.9 MiB/s | 335.6 KiB | 00m00s
[ 7/43] Installing python3-jsonschema-s 100% | 13.5 MiB/s | 55.1 KiB | 00m00s
[ 8/43] Installing python3-jsonschema-0 100% | 121.3 MiB/s | 869.2 KiB | 00m00s
[ 9/43] Installing python3-jupyter-core 100% | 50.7 MiB/s | 207.5 KiB | 00m00s
[10/43] Installing python3-zombie-imp-0 100% | 12.2 MiB/s | 62.4 KiB | 00m00s
[11/43] Installing python3-boto-0:2.49. 100% | 123.4 MiB/s | 9.9 MiB | 00m00s
[12/43] Installing python3-smmap-0:5.0. 100% | 67.6 MiB/s | 207.7 KiB | 00m00s
[13/43] Installing python3-gitdb-0:4.0. 100% | 84.7 MiB/s | 520.6 KiB | 00m00s
[14/43] Installing python3-fastjsonsche 100% | 64.7 MiB/s | 198.8 KiB | 00m00s
[15/43] Installing libcbor-0:0.11.0-2.f 100% | 73.5 MiB/s | 75.3 KiB | 00m00s
[16/43] Installing libfido2-0:1.15.0-2. 100% | 117.1 MiB/s | 239.7 KiB | 00m00s
[17/43] Installing openssh-0:9.8p1-3.fc 100% | 254.1 MiB/s | 1.8 MiB | 00m00s
[18/43] Installing libedit-0:3.1-53.202 100% | 120.0 MiB/s | 245.8 KiB | 00m00s
[19/43] Installing openssh-clients-0:9. 100% | 76.3 MiB/s | 2.6 MiB | 00m00s
[20/43] Installing git-core-0:2.47.0-1. 100% | 317.6 MiB/s | 22.6 MiB | 00m00s
[21/43] Installing libyaml-0:0.2.5-15.f 100% | 132.6 MiB/s | 135.8 KiB | 00m00s
[22/43] Installing python3-pyyaml-0:6.0 100% | 112.3 MiB/s | 804.9 KiB | 00m00s
[23/43] Installing python3-plac-0:1.4.3 100% | 114.1 MiB/s | 233.7 KiB | 00m00s
[24/43] Installing python3-dpath-0:2.2. 100% | 48.3 MiB/s | 99.0 KiB | 00m00s
[25/43] Installing python3-yte-0:1.5.4- 100% | 32.4 MiB/s | 66.3 KiB | 00m00s
[26/43] Installing python3-conda-inject 100% | 12.8 MiB/s | 26.3 KiB | 00m00s
[27/43] Installing python3-GitPython-0: 100% | 167.8 MiB/s | 1.8 MiB | 00m00s
[28/43] Installing python3-nbformat-0:5 100% | 61.8 MiB/s | 569.9 KiB | 00m00s
[29/43] Installing python3-smart_open-0 100% | 98.9 MiB/s | 506.4 KiB | 00m00s
[30/43] Installing python3-tabulate-0:0 100% | 168.7 MiB/s | 345.5 KiB | 00m00s
[31/43] Installing python3-stopit-0:1.1 100% | 22.6 MiB/s | 69.5 KiB | 00m00s
[32/43] Installing python3-slackclient- 100% | 82.3 MiB/s | 3.0 MiB | 00m00s
[33/43] Installing python3-pygments-0:2 100% | 169.4 MiB/s | 10.8 MiB | 00m00s
[34/43] Installing python3-psutil-0:5.9 100% | 241.3 MiB/s | 1.4 MiB | 00m00s
[35/43] Installing python3-immutables-0 100% | 62.5 MiB/s | 191.9 KiB | 00m00s
[36/43] Installing python3-humanfriendl 100% | 90.5 MiB/s | 556.3 KiB | 00m00s
[37/43] Installing python3-docutils-0:0 100% | 140.2 MiB/s | 5.0 MiB | 00m00s
[38/43] Installing python3-datrie-0:0.8 100% | 218.2 MiB/s | 446.8 KiB | 00m00s
[39/43] Installing python3-connection_p 100% | 11.6 MiB/s | 23.8 KiB | 00m00s
[40/43] Installing python3-appdirs-0:1. 100% | 69.2 MiB/s | 70.9 KiB | 00m00s
[41/43] Installing python3-toposort-0:1 100% | 30.1 MiB/s | 30.9 KiB | 00m00s
[42/43] Installing python3-pulp-0:2.8.0 100% | 151.8 MiB/s | 1.1 MiB | 00m00s
warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[43/43] Installing python3-snakemake-in 100% | 368.3 KiB/s | 38.3 KiB | 00m00s
Warning: skipped PGP checks for 14 packages from repository: copr_base
Complete!
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1728777600
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.xHgsAF
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ cd snakemake-8.18.2
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(packaging)'
+ echo 'python3dist(pip) >= 19'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(tomli) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ echo -n
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ RPM_TOXENV=py313
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires -x reports,messaging
Handling setuptools>=42 from build-system.requires
Requirement satisfied: setuptools>=42
(installed: setuptools 69.2.0)
Handling tomli; python_version < "3.11" from build-system.requires
Ignoring alien requirement: tomli; python_version < "3.11"
running egg_info
writing snakemake.egg-info/PKG-INFO
writing dependency_links to snakemake.egg-info/dependency_links.txt
writing entry points to snakemake.egg-info/entry_points.txt
writing requirements to snakemake.egg-info/requires.txt
writing top-level names to snakemake.egg-info/top_level.txt
reading manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file 'snakemake.egg-info/SOURCES.txt'
Handling wheel from get_requires_for_build_wheel
Requirement satisfied: wheel
(installed: wheel 0.43.0)
running dist_info
writing snakemake.egg-info/PKG-INFO
writing dependency_links to snakemake.egg-info/dependency_links.txt
writing entry points to snakemake.egg-info/entry_points.txt
writing requirements to snakemake.egg-info/requires.txt
writing top-level names to snakemake.egg-info/top_level.txt
reading manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file 'snakemake.egg-info/SOURCES.txt'
creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info'
Handling appdirs from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: appdirs
(installed: appdirs 1.4.4)
Handling immutables from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: immutables
(installed: immutables 0.20)
Handling configargparse from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: configargparse
(installed: configargparse 1.7)
Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: connection-pool >=0.0.3
(installed: connection-pool 0.0.3)
Handling datrie from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: datrie
(installed: datrie 0.8.2)
Handling docutils from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: docutils
(installed: docutils 0.21.2)
Handling gitpython from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: gitpython
(installed: gitpython 3.1.43)
Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: humanfriendly
(installed: humanfriendly 10.0)
Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: jinja2 <4.0,>=3.0
(installed: jinja2 3.1.4)
Handling jsonschema from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: jsonschema
(installed: jsonschema 4.19.1)
Handling nbformat from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: nbformat
(installed: nbformat 5.9.2)
Handling packaging from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: packaging
(installed: packaging 24.1)
Handling psutil from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: psutil
(installed: psutil 5.9.8)
Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: pulp <2.10,>=2.3.1
(installed: pulp 2.8.0)
Handling pyyaml from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: pyyaml
(installed: pyyaml 6.0.1)
Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: requests <3.0,>=2.8.1
(installed: requests 2.32.3)
Handling reretry from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: reretry
(installed: reretry 0.11.8)
Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: smart-open <8.0,>=4.0
(installed: smart-open 7.0.5)
Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0
(installed: snakemake-interface-executor-plugins 9.2.0)
Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0
(installed: snakemake-interface-common 1.17.3)
Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3
(installed: snakemake-interface-storage-plugins 3.3.0)
Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0
(installed: snakemake-interface-report-plugins 1.0.0)
Handling stopit from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: stopit
(installed: stopit 1.1.2)
Handling tabulate from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: tabulate
(installed: tabulate 0.9.0)
Handling throttler from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: throttler
(installed: throttler 1.2.2)
Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: toposort <2.0,>=1.10
(installed: toposort 1.10)
Handling wrapt from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: wrapt
(installed: wrapt 1.16.0)
Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: yte <2.0,>=1.5.1
(installed: yte 1.5.4)
Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: dpath <3.0.0,>=2.1.6
(installed: dpath 2.2.0)
Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: conda-inject <2.0,>=1.3.1
(installed: conda-inject 1.3.2)
Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: slack-sdk ; extra == 'messaging'
(installed: slack-sdk 3.33.1)
Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake)
Ignoring alien requirement: eido ; extra == 'pep'
Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake)
Ignoring alien requirement: peppy ; extra == 'pep'
Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: pygments ; extra == 'reports'
(installed: pygments 2.18.0)
+ cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires
+ rm -rfv snakemake-8.18.2.dist-info/
removed 'snakemake-8.18.2.dist-info/entry_points.txt'
removed 'snakemake-8.18.2.dist-info/top_level.txt'
removed 'snakemake-8.18.2.dist-info/METADATA'
removed 'snakemake-8.18.2.dist-info/LICENSE.md'
removed directory 'snakemake-8.18.2.dist-info/'
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.buildreqs.nosrc.rpm
INFO: Going to install missing dynamic buildrequires
Updating and loading repositories:
fedora 100% | 1.0 MiB/s | 25.9 KiB | 00m00s
updates 100% | 1.1 MiB/s | 28.6 KiB | 00m00s
Copr repository 100% | 48.0 KiB/s | 1.5 KiB | 00m00s
Repositories loaded.
Package "environment-modules-5.4.0-2.fc41.x86_64" is already installed.
Package "graphviz-12.1.2-1.fc41.x86_64" is already installed.
Package "help2man-1.49.3-6.fc41.noarch" is already installed.
Package "pyproject-rpm-macros-1.15.1-1.fc41.noarch" is already installed.
Package "python-unversioned-command-3.13.0-1.fc41.noarch" is already installed.
Package "python3-devel-3.13.0-1.fc41.x86_64" is already installed.
Package "python3-appdirs-1.4.4-25.fc41.noarch" is already installed.
Package "python3-boto3-1.35.37-1.fc41.noarch" is already installed.
Package "python3-configargparse-1.7-5.fc41.noarch" is already installed.
Package "python3-connection_pool-0.0.3-13.fc41.noarch" is already installed.
Package "python3-datrie-0.8.2-27.fc41.x86_64" is already installed.
Package "python3-docutils-0.21.2-1.fc41.noarch" is already installed.
Package "python3-flask-1:3.0.3-8.fc41.noarch" is already installed.
Package "python3-GitPython-3.1.43-1.fc41.noarch" is already installed.
Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed.
Package "python3-humanfriendly-10.0-13.fc41.noarch" is already installed.
Package "python3-immutables-0.20-7.fc41.x86_64" is already installed.
Package "python3-jsonschema-4.19.1-6.fc41.noarch" is already installed.
Package "python3-nbformat-5.9.2-6.fc41.noarch" is already installed.
Package "python3-packaging-24.1-2.fc41.noarch" is already installed.
Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed.
Package "python3-pip-24.2-2.fc41.noarch" is already installed.
Package "python3-psutil-5.9.8-5.fc41.x86_64" is already installed.
Package "python3-pygments-2.18.0-3.fc41.noarch" is already installed.
Package "python3-pytest-8.3.1-5.fc41.noarch" is already installed.
Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed.
Package "python3-pyyaml-6.0.1-18.fc41.x86_64" is already installed.
Package "python3-reretry-0.11.8-11.fc41.noarch" is already installed.
Package "python3-setuptools-69.2.0-9.fc41.noarch" is already installed.
Package "python3-slackclient-3.33.1-1.fc41.noarch" is already installed.
Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed.
Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc41.noarch" is already installed.
Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed.
Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc41.noarch" is already installed.
Package "python3-stopit-1.1.2-12.fc41.noarch" is already installed.
Package "python3-tabulate-0.9.0-10.fc41.noarch" is already installed.
Package "python3-throttler-1.2.2-11.fc41.noarch" is already installed.
Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed.
Package "python3-wrapt-1.16.0-6.fc41.x86_64" is already installed.
Package "strace-6.10-1.fc41.x86_64" is already installed.
Package "stress-1.0.7-5.fc41.x86_64" is already installed.
Package "vim-filesystem-2:9.1.737-1.fc41.noarch" is already installed.
Nothing to do.
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1728777600
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.iw6a3C
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ cd snakemake-8.18.2
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(packaging)'
+ echo 'python3dist(pip) >= 19'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(tomli) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ echo -n
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ RPM_TOXENV=py313
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires -x reports,messaging
Handling setuptools>=42 from build-system.requires
Requirement satisfied: setuptools>=42
(installed: setuptools 69.2.0)
Handling tomli; python_version < "3.11" from build-system.requires
Ignoring alien requirement: tomli; python_version < "3.11"
running egg_info
writing snakemake.egg-info/PKG-INFO
writing dependency_links to snakemake.egg-info/dependency_links.txt
writing entry points to snakemake.egg-info/entry_points.txt
writing requirements to snakemake.egg-info/requires.txt
writing top-level names to snakemake.egg-info/top_level.txt
reading manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file 'snakemake.egg-info/SOURCES.txt'
Handling wheel from get_requires_for_build_wheel
Requirement satisfied: wheel
(installed: wheel 0.43.0)
running dist_info
writing snakemake.egg-info/PKG-INFO
writing dependency_links to snakemake.egg-info/dependency_links.txt
writing entry points to snakemake.egg-info/entry_points.txt
writing requirements to snakemake.egg-info/requires.txt
writing top-level names to snakemake.egg-info/top_level.txt
reading manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file 'snakemake.egg-info/SOURCES.txt'
creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info'
Handling appdirs from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: appdirs
(installed: appdirs 1.4.4)
Handling immutables from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: immutables
(installed: immutables 0.20)
Handling configargparse from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: configargparse
(installed: configargparse 1.7)
Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: connection-pool >=0.0.3
(installed: connection-pool 0.0.3)
Handling datrie from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: datrie
(installed: datrie 0.8.2)
Handling docutils from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: docutils
(installed: docutils 0.21.2)
Handling gitpython from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: gitpython
(installed: gitpython 3.1.43)
Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: humanfriendly
(installed: humanfriendly 10.0)
Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: jinja2 <4.0,>=3.0
(installed: jinja2 3.1.4)
Handling jsonschema from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: jsonschema
(installed: jsonschema 4.19.1)
Handling nbformat from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: nbformat
(installed: nbformat 5.9.2)
Handling packaging from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: packaging
(installed: packaging 24.1)
Handling psutil from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: psutil
(installed: psutil 5.9.8)
Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: pulp <2.10,>=2.3.1
(installed: pulp 2.8.0)
Handling pyyaml from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: pyyaml
(installed: pyyaml 6.0.1)
Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: requests <3.0,>=2.8.1
(installed: requests 2.32.3)
Handling reretry from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: reretry
(installed: reretry 0.11.8)
Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: smart-open <8.0,>=4.0
(installed: smart-open 7.0.5)
Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0
(installed: snakemake-interface-executor-plugins 9.2.0)
Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0
(installed: snakemake-interface-common 1.17.3)
Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3
(installed: snakemake-interface-storage-plugins 3.3.0)
Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0
(installed: snakemake-interface-report-plugins 1.0.0)
Handling stopit from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: stopit
(installed: stopit 1.1.2)
Handling tabulate from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: tabulate
(installed: tabulate 0.9.0)
Handling throttler from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: throttler
(installed: throttler 1.2.2)
Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: toposort <2.0,>=1.10
(installed: toposort 1.10)
Handling wrapt from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: wrapt
(installed: wrapt 1.16.0)
Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: yte <2.0,>=1.5.1
(installed: yte 1.5.4)
Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: dpath <3.0.0,>=2.1.6
(installed: dpath 2.2.0)
Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: conda-inject <2.0,>=1.3.1
(installed: conda-inject 1.3.2)
Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: slack-sdk ; extra == 'messaging'
(installed: slack-sdk 3.33.1)
Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake)
Ignoring alien requirement: eido ; extra == 'pep'
Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake)
Ignoring alien requirement: peppy ; extra == 'pep'
Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake)
Requirement satisfied: pygments ; extra == 'reports'
(installed: pygments 2.18.0)
+ cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-buildrequires
+ rm -rfv snakemake-8.18.2.dist-info/
removed 'snakemake-8.18.2.dist-info/entry_points.txt'
removed 'snakemake-8.18.2.dist-info/top_level.txt'
removed 'snakemake-8.18.2.dist-info/METADATA'
removed 'snakemake-8.18.2.dist-info/LICENSE.md'
removed directory 'snakemake-8.18.2.dist-info/'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.gElIYP
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd snakemake-8.18.2
+ mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir
Processing /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2
Preparing metadata (pyproject.toml): started
Running command Preparing metadata (pyproject.toml)
running dist_info
creating /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake.egg-info
writing /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake.egg-info/PKG-INFO
writing dependency_links to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake.egg-info/dependency_links.txt
writing entry points to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake.egg-info/entry_points.txt
writing requirements to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake.egg-info/requires.txt
writing top-level names to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake.egg-info/top_level.txt
writing manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake.egg-info/SOURCES.txt'
reading manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake.egg-info/SOURCES.txt'
creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-vrvi0ajm/snakemake-8.18.2.dist-info'
Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: snakemake
Building wheel for snakemake (pyproject.toml): started
Running command Building wheel for snakemake (pyproject.toml)
running bdist_wheel
running build
running build_py
creating build
creating build/lib
creating build/lib/snakemake
copying snakemake/__init__.py -> build/lib/snakemake
copying snakemake/__main__.py -> build/lib/snakemake
copying snakemake/_version.py -> build/lib/snakemake
copying snakemake/api.py -> build/lib/snakemake
copying snakemake/benchmark.py -> build/lib/snakemake
copying snakemake/checkpoints.py -> build/lib/snakemake
copying snakemake/cli.py -> build/lib/snakemake
copying snakemake/cwl.py -> build/lib/snakemake
copying snakemake/dag.py -> build/lib/snakemake
copying snakemake/decorators.py -> build/lib/snakemake
copying snakemake/exceptions.py -> build/lib/snakemake
copying snakemake/gui.py -> build/lib/snakemake
copying snakemake/io.py -> build/lib/snakemake
copying snakemake/ioflags.py -> build/lib/snakemake
copying snakemake/ioutils.py -> build/lib/snakemake
copying snakemake/jobs.py -> build/lib/snakemake
copying snakemake/logging.py -> build/lib/snakemake
copying snakemake/modules.py -> build/lib/snakemake
copying snakemake/notebook.py -> build/lib/snakemake
copying snakemake/output_index.py -> build/lib/snakemake
copying snakemake/parser.py -> build/lib/snakemake
copying snakemake/path_modifier.py -> build/lib/snakemake
copying snakemake/persistence.py -> build/lib/snakemake
copying snakemake/profiles.py -> build/lib/snakemake
copying snakemake/resources.py -> build/lib/snakemake
copying snakemake/ruleinfo.py -> build/lib/snakemake
copying snakemake/rules.py -> build/lib/snakemake
copying snakemake/scheduler.py -> build/lib/snakemake
copying snakemake/shell.py -> build/lib/snakemake
copying snakemake/sourcecache.py -> build/lib/snakemake
copying snakemake/spawn_jobs.py -> build/lib/snakemake
copying snakemake/storage.py -> build/lib/snakemake
copying snakemake/target_jobs.py -> build/lib/snakemake
copying snakemake/utils.py -> build/lib/snakemake
copying snakemake/workflow.py -> build/lib/snakemake
copying snakemake/wrapper.py -> build/lib/snakemake
creating build/lib/snakemake/caching
copying snakemake/caching/__init__.py -> build/lib/snakemake/caching
copying snakemake/caching/hash.py -> build/lib/snakemake/caching
copying snakemake/caching/local.py -> build/lib/snakemake/caching
copying snakemake/caching/storage.py -> build/lib/snakemake/caching
creating build/lib/snakemake/common
copying snakemake/common/__init__.py -> build/lib/snakemake/common
copying snakemake/common/argparse.py -> build/lib/snakemake/common
copying snakemake/common/configfile.py -> build/lib/snakemake/common
copying snakemake/common/git.py -> build/lib/snakemake/common
copying snakemake/common/tbdstring.py -> build/lib/snakemake/common
copying snakemake/common/typing.py -> build/lib/snakemake/common
copying snakemake/common/workdir_handler.py -> build/lib/snakemake/common
creating build/lib/snakemake/deployment
copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment
copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment
copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment
copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment
copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment
creating build/lib/snakemake/executors
copying snakemake/executors/__init__.py -> build/lib/snakemake/executors
copying snakemake/executors/dryrun.py -> build/lib/snakemake/executors
copying snakemake/executors/local.py -> build/lib/snakemake/executors
copying snakemake/executors/touch.py -> build/lib/snakemake/executors
copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors
creating build/lib/snakemake/linting
copying snakemake/linting/__init__.py -> build/lib/snakemake/linting
copying snakemake/linting/links.py -> build/lib/snakemake/linting
copying snakemake/linting/rules.py -> build/lib/snakemake/linting
copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting
creating build/lib/snakemake/remote
copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote
copying snakemake/remote/EGA.py -> build/lib/snakemake/remote
copying snakemake/remote/FTP.py -> build/lib/snakemake/remote
copying snakemake/remote/GS.py -> build/lib/snakemake/remote
copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote
copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote
copying snakemake/remote/S3.py -> build/lib/snakemake/remote
copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote
copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote
copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote
copying snakemake/remote/__init__.py -> build/lib/snakemake/remote
copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote
copying snakemake/remote/gfal.py -> build/lib/snakemake/remote
copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote
copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote
copying snakemake/remote/webdav.py -> build/lib/snakemake/remote
copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote
creating build/lib/snakemake/report
copying snakemake/report/__init__.py -> build/lib/snakemake/report
copying snakemake/report/common.py -> build/lib/snakemake/report
copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report
creating build/lib/snakemake/script
copying snakemake/script/__init__.py -> build/lib/snakemake/script
creating build/lib/snakemake/settings
copying snakemake/settings/__init__.py -> build/lib/snakemake/settings
copying snakemake/settings/enums.py -> build/lib/snakemake/settings
copying snakemake/settings/types.py -> build/lib/snakemake/settings
creating build/lib/snakemake/template_rendering
copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering
copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering
copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering
creating build/lib/snakemake/unit_tests
copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests
creating build/lib/snakemake/common/tests
copying snakemake/common/tests/__init__.py -> build/lib/snakemake/common/tests
creating build/lib/snakemake/common/tests/testcases
copying snakemake/common/tests/testcases/__init__.py -> build/lib/snakemake/common/tests/testcases
creating build/lib/snakemake/common/tests/testcases/groups
copying snakemake/common/tests/testcases/groups/__init__.py -> build/lib/snakemake/common/tests/testcases/groups
creating build/lib/snakemake/common/tests/testcases/simple
copying snakemake/common/tests/testcases/simple/__init__.py -> build/lib/snakemake/common/tests/testcases/simple
creating build/lib/snakemake/report/html_reporter
copying snakemake/report/html_reporter/__init__.py -> build/lib/snakemake/report/html_reporter
copying snakemake/report/html_reporter/common.py -> build/lib/snakemake/report/html_reporter
creating build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/__init__.py -> build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/categories.py -> build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/common.py -> build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/configfiles.py -> build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/packages.py -> build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/results.py -> build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/rulegraph.py -> build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/rules.py -> build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/runtimes.py -> build/lib/snakemake/report/html_reporter/data
copying snakemake/report/html_reporter/data/timeline.py -> build/lib/snakemake/report/html_reporter/data
creating build/lib/snakemake/report/html_reporter/template
copying snakemake/report/html_reporter/template/__init__.py -> build/lib/snakemake/report/html_reporter/template
creating build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/__init__.py -> build/lib/snakemake/report/html_reporter/template/components
creating build/lib/snakemake/unit_tests/templates
copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates
copying snakemake/report.css -> build/lib/snakemake
copying snakemake/gui.html -> build/lib/snakemake
copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors
copying snakemake/common/tests/testcases/groups/Snakefile -> build/lib/snakemake/common/tests/testcases/groups
copying snakemake/common/tests/testcases/simple/Snakefile -> build/lib/snakemake/common/tests/testcases/simple
copying snakemake/report/html_reporter/template/style.css -> build/lib/snakemake/report/html_reporter/template
copying snakemake/report/html_reporter/template/index.html.jinja2 -> build/lib/snakemake/report/html_reporter/template
copying snakemake/report/html_reporter/template/logo.svg -> build/lib/snakemake/report/html_reporter/template
copying snakemake/report/html_reporter/template/components/abstract_menu.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/abstract_results.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/app.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/button.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/category.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/common.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/content.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/icon.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/list_heading.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/list_item.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/menu.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/navbar.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/report_info.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/result_info.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/result_view_button.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/rule_graph.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/rule_info.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/search_results.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/stats.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/report/html_reporter/template/components/subcategory.js -> build/lib/snakemake/report/html_reporter/template/components
copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates
copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates
UPDATING build/lib/snakemake/_version.py
set build/lib/snakemake/_version.py to '8.18.2'
installing to build/bdist.linux-x86_64/wheel
running install
running install_lib
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/wheel
creating build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/__main__.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/api.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/benchmark.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/cli.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/cwl.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/dag.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/decorators.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/exceptions.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/gui.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/io.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/ioflags.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/ioutils.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/jobs.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/logging.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/modules.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/notebook.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/output_index.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/parser.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/persistence.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/profiles.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/resources.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/rules.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/scheduler.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/shell.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/spawn_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/storage.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/utils.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/workflow.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/wrapper.py -> build/bdist.linux-x86_64/wheel/snakemake
creating build/bdist.linux-x86_64/wheel/snakemake/caching
copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/caching
copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-x86_64/wheel/snakemake/caching
copying build/lib/snakemake/caching/local.py -> build/bdist.linux-x86_64/wheel/snakemake/caching
copying build/lib/snakemake/caching/storage.py -> build/bdist.linux-x86_64/wheel/snakemake/caching
creating build/bdist.linux-x86_64/wheel/snakemake/common
copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common
copying build/lib/snakemake/common/argparse.py -> build/bdist.linux-x86_64/wheel/snakemake/common
copying build/lib/snakemake/common/configfile.py -> build/bdist.linux-x86_64/wheel/snakemake/common
copying build/lib/snakemake/common/git.py -> build/bdist.linux-x86_64/wheel/snakemake/common
copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-x86_64/wheel/snakemake/common
copying build/lib/snakemake/common/typing.py -> build/bdist.linux-x86_64/wheel/snakemake/common
copying build/lib/snakemake/common/workdir_handler.py -> build/bdist.linux-x86_64/wheel/snakemake/common
creating build/bdist.linux-x86_64/wheel/snakemake/common/tests
copying build/lib/snakemake/common/tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests
creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases
copying build/lib/snakemake/common/tests/testcases/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases
creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups
copying build/lib/snakemake/common/tests/testcases/groups/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups
copying build/lib/snakemake/common/tests/testcases/groups/Snakefile -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/groups
creating build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple
copying build/lib/snakemake/common/tests/testcases/simple/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple
copying build/lib/snakemake/common/tests/testcases/simple/Snakefile -> build/bdist.linux-x86_64/wheel/snakemake/common/tests/testcases/simple
creating build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
creating build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/dryrun.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/local.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/touch.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-x86_64/wheel/snakemake/executors
creating build/bdist.linux-x86_64/wheel/snakemake/linting
copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/linting
copying build/lib/snakemake/linting/links.py -> build/bdist.linux-x86_64/wheel/snakemake/linting
copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/linting
copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-x86_64/wheel/snakemake/linting
creating build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
creating build/bdist.linux-x86_64/wheel/snakemake/report
copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report
copying build/lib/snakemake/report/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report
copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-x86_64/wheel/snakemake/report
creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter
copying build/lib/snakemake/report/html_reporter/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter
copying build/lib/snakemake/report/html_reporter/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter
creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/categories.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/configfiles.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/packages.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/results.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/rulegraph.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/runtimes.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
copying build/lib/snakemake/report/html_reporter/data/timeline.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/data
creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template
copying build/lib/snakemake/report/html_reporter/template/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template
creating build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/abstract_menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/abstract_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/app.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/category.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/common.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/content.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/icon.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/list_heading.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/list_item.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/navbar.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/report_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/result_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/result_view_button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/rule_graph.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/rule_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/search_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/stats.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/components/subcategory.js -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template/components
copying build/lib/snakemake/report/html_reporter/template/style.css -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template
copying build/lib/snakemake/report/html_reporter/template/index.html.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template
copying build/lib/snakemake/report/html_reporter/template/logo.svg -> build/bdist.linux-x86_64/wheel/snakemake/report/html_reporter/template
creating build/bdist.linux-x86_64/wheel/snakemake/script
copying build/lib/snakemake/script/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/script
creating build/bdist.linux-x86_64/wheel/snakemake/settings
copying build/lib/snakemake/settings/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/settings
copying build/lib/snakemake/settings/enums.py -> build/bdist.linux-x86_64/wheel/snakemake/settings
copying build/lib/snakemake/settings/types.py -> build/bdist.linux-x86_64/wheel/snakemake/settings
creating build/bdist.linux-x86_64/wheel/snakemake/template_rendering
copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering
copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering
copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering
creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests
copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests
creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates
copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates
copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates
copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates
copying build/lib/snakemake/report.css -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/gui.html -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/_version.py -> build/bdist.linux-x86_64/wheel/snakemake
running install_egg_info
running egg_info
writing snakemake.egg-info/PKG-INFO
writing dependency_links to snakemake.egg-info/dependency_links.txt
writing entry points to snakemake.egg-info/entry_points.txt
writing requirements to snakemake.egg-info/requires.txt
writing top-level names to snakemake.egg-info/top_level.txt
reading manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file 'snakemake.egg-info/SOURCES.txt'
Copying snakemake.egg-info to build/bdist.linux-x86_64/wheel/snakemake-8.18.2-py3.13.egg-info
running install_scripts
creating build/bdist.linux-x86_64/wheel/snakemake-8.18.2.dist-info/WHEEL
creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-wheel-rdxvumgj/.tmp-r0nskuzk/snakemake-8.18.2-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
adding 'snakemake/__init__.py'
adding 'snakemake/__main__.py'
adding 'snakemake/_version.py'
adding 'snakemake/api.py'
adding 'snakemake/benchmark.py'
adding 'snakemake/checkpoints.py'
adding 'snakemake/cli.py'
adding 'snakemake/cwl.py'
adding 'snakemake/dag.py'
adding 'snakemake/decorators.py'
adding 'snakemake/exceptions.py'
adding 'snakemake/gui.html'
adding 'snakemake/gui.py'
adding 'snakemake/io.py'
adding 'snakemake/ioflags.py'
adding 'snakemake/ioutils.py'
adding 'snakemake/jobs.py'
adding 'snakemake/logging.py'
adding 'snakemake/modules.py'
adding 'snakemake/notebook.py'
adding 'snakemake/output_index.py'
adding 'snakemake/parser.py'
adding 'snakemake/path_modifier.py'
adding 'snakemake/persistence.py'
adding 'snakemake/profiles.py'
adding 'snakemake/report.css'
adding 'snakemake/resources.py'
adding 'snakemake/ruleinfo.py'
adding 'snakemake/rules.py'
adding 'snakemake/scheduler.py'
adding 'snakemake/shell.py'
adding 'snakemake/sourcecache.py'
adding 'snakemake/spawn_jobs.py'
adding 'snakemake/storage.py'
adding 'snakemake/target_jobs.py'
adding 'snakemake/utils.py'
adding 'snakemake/workflow.py'
adding 'snakemake/wrapper.py'
adding 'snakemake/caching/__init__.py'
adding 'snakemake/caching/hash.py'
adding 'snakemake/caching/local.py'
adding 'snakemake/caching/storage.py'
adding 'snakemake/common/__init__.py'
adding 'snakemake/common/argparse.py'
adding 'snakemake/common/configfile.py'
adding 'snakemake/common/git.py'
adding 'snakemake/common/tbdstring.py'
adding 'snakemake/common/typing.py'
adding 'snakemake/common/workdir_handler.py'
adding 'snakemake/common/tests/__init__.py'
adding 'snakemake/common/tests/testcases/__init__.py'
adding 'snakemake/common/tests/testcases/groups/Snakefile'
adding 'snakemake/common/tests/testcases/groups/__init__.py'
adding 'snakemake/common/tests/testcases/simple/Snakefile'
adding 'snakemake/common/tests/testcases/simple/__init__.py'
adding 'snakemake/deployment/__init__.py'
adding 'snakemake/deployment/conda.py'
adding 'snakemake/deployment/containerize.py'
adding 'snakemake/deployment/env_modules.py'
adding 'snakemake/deployment/singularity.py'
adding 'snakemake/executors/__init__.py'
adding 'snakemake/executors/dryrun.py'
adding 'snakemake/executors/google_lifesciences_helper.py'
adding 'snakemake/executors/jobscript.sh'
adding 'snakemake/executors/local.py'
adding 'snakemake/executors/touch.py'
adding 'snakemake/linting/__init__.py'
adding 'snakemake/linting/links.py'
adding 'snakemake/linting/rules.py'
adding 'snakemake/linting/snakefiles.py'
adding 'snakemake/remote/AzBlob.py'
adding 'snakemake/remote/EGA.py'
adding 'snakemake/remote/FTP.py'
adding 'snakemake/remote/GS.py'
adding 'snakemake/remote/HTTP.py'
adding 'snakemake/remote/NCBI.py'
adding 'snakemake/remote/S3.py'
adding 'snakemake/remote/S3Mocked.py'
adding 'snakemake/remote/SFTP.py'
adding 'snakemake/remote/XRootD.py'
adding 'snakemake/remote/__init__.py'
adding 'snakemake/remote/dropbox.py'
adding 'snakemake/remote/gfal.py'
adding 'snakemake/remote/gridftp.py'
adding 'snakemake/remote/iRODS.py'
adding 'snakemake/remote/webdav.py'
adding 'snakemake/remote/zenodo.py'
adding 'snakemake/report/__init__.py'
adding 'snakemake/report/common.py'
adding 'snakemake/report/rulegraph_spec.py'
adding 'snakemake/report/html_reporter/__init__.py'
adding 'snakemake/report/html_reporter/common.py'
adding 'snakemake/report/html_reporter/data/__init__.py'
adding 'snakemake/report/html_reporter/data/categories.py'
adding 'snakemake/report/html_reporter/data/common.py'
adding 'snakemake/report/html_reporter/data/configfiles.py'
adding 'snakemake/report/html_reporter/data/packages.py'
adding 'snakemake/report/html_reporter/data/results.py'
adding 'snakemake/report/html_reporter/data/rulegraph.py'
adding 'snakemake/report/html_reporter/data/rules.py'
adding 'snakemake/report/html_reporter/data/runtimes.py'
adding 'snakemake/report/html_reporter/data/timeline.py'
adding 'snakemake/report/html_reporter/template/__init__.py'
adding 'snakemake/report/html_reporter/template/index.html.jinja2'
adding 'snakemake/report/html_reporter/template/logo.svg'
adding 'snakemake/report/html_reporter/template/style.css'
adding 'snakemake/report/html_reporter/template/components/__init__.py'
adding 'snakemake/report/html_reporter/template/components/abstract_menu.js'
adding 'snakemake/report/html_reporter/template/components/abstract_results.js'
adding 'snakemake/report/html_reporter/template/components/app.js'
adding 'snakemake/report/html_reporter/template/components/breadcrumbs.js'
adding 'snakemake/report/html_reporter/template/components/button.js'
adding 'snakemake/report/html_reporter/template/components/category.js'
adding 'snakemake/report/html_reporter/template/components/common.js'
adding 'snakemake/report/html_reporter/template/components/content.js'
adding 'snakemake/report/html_reporter/template/components/icon.js'
adding 'snakemake/report/html_reporter/template/components/list_heading.js'
adding 'snakemake/report/html_reporter/template/components/list_item.js'
adding 'snakemake/report/html_reporter/template/components/menu.js'
adding 'snakemake/report/html_reporter/template/components/navbar.js'
adding 'snakemake/report/html_reporter/template/components/report_info.js'
adding 'snakemake/report/html_reporter/template/components/result_info.js'
adding 'snakemake/report/html_reporter/template/components/result_view_button.js'
adding 'snakemake/report/html_reporter/template/components/rule_graph.js'
adding 'snakemake/report/html_reporter/template/components/rule_info.js'
adding 'snakemake/report/html_reporter/template/components/search_results.js'
adding 'snakemake/report/html_reporter/template/components/stats.js'
adding 'snakemake/report/html_reporter/template/components/subcategory.js'
adding 'snakemake/script/__init__.py'
adding 'snakemake/settings/__init__.py'
adding 'snakemake/settings/enums.py'
adding 'snakemake/settings/types.py'
adding 'snakemake/template_rendering/__init__.py'
adding 'snakemake/template_rendering/jinja2.py'
adding 'snakemake/template_rendering/yte.py'
adding 'snakemake/unit_tests/__init__.py'
adding 'snakemake/unit_tests/templates/__init__.py'
adding 'snakemake/unit_tests/templates/common.py.jinja2'
adding 'snakemake/unit_tests/templates/ruletest.py.jinja2'
adding 'snakemake-8.18.2.dist-info/LICENSE.md'
adding 'snakemake-8.18.2.dist-info/METADATA'
adding 'snakemake-8.18.2.dist-info/WHEEL'
adding 'snakemake-8.18.2.dist-info/entry_points.txt'
adding 'snakemake-8.18.2.dist-info/top_level.txt'
adding 'snakemake-8.18.2.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Building wheel for snakemake (pyproject.toml): finished with status 'done'
Created wheel for snakemake: filename=snakemake-8.18.2-py3-none-any.whl size=307215 sha256=e7928577a93bbff5a75f75ed340e2ce0260eeb12d89bc27dd363cb1133554b3d
Stored in directory: /builddir/.cache/pip/wheels/b4/a9/cd/2536f65abc896962a23d47538f30fe428d1ceaa067828ea33b
Successfully built snakemake
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.jVXQAL
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ '[' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT
++ dirname /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build
+ mkdir /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd snakemake-8.18.2
++ ls /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir/snakemake-8.18.2-py3-none-any.whl
++ xargs basename --multiple
++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/'
+ specifier=snakemake==8.18.2
+ '[' -z snakemake==8.18.2 ']'
+ TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir
+ /usr/bin/python3 -m pip install --root /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir snakemake==8.18.2
Using pip 24.2 from /usr/lib/python3.13/site-packages/pip (python 3.13)
Looking in links: /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir
Processing ./pyproject-wheeldir/snakemake-8.18.2-py3-none-any.whl
Installing collected packages: snakemake
Creating /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin
changing mode of /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake to 755
Successfully installed snakemake-8.18.2
+ '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin ']'
+ '[' -z sP ']'
+ shebang_flags=-kasP
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake: updating
+ rm -rfv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/__pycache__
+ rm -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-ghost-distinfo
+ site_dirs=()
+ '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']'
+ site_dirs+=("/usr/lib/python3.13/site-packages")
+ '[' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']'
+ '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages ']'
+ for site_dir in ${site_dirs[@]}
+ for distinfo in /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT$site_dir/*.dist-info
+ echo '%ghost /usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info'
+ sed -i s/pip/rpm/ /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/INSTALLER
+ PYTHONPATH=/usr/lib/rpm/redhat
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --record /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-record
+ rm -fv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD
removed '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD'
+ rm -fv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/REQUESTED
removed '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/REQUESTED'
++ wc -l /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-ghost-distinfo
++ cut -f1 '-d '
+ lines=1
+ '[' 1 -ne 1 ']'
+ RPM_FILES_ESCAPE=4.19
+ /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-files --output-modules /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-record --prefix /usr -l snakemake
+ install -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/man/man1
+ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin
+ PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages
+ help2man --no-info '--name=Metapackage for snakemake: messaging extras' snakemake
+ install -t /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/nano -D -m 0644 -p misc/nano/syntax/snakemake.nanorc
+ install -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles
+ cp -vrp misc/vim/README.md misc/vim/ftdetect misc/vim/ftplugin misc/vim/syntax /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles
'misc/vim/README.md' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/README.md'
'misc/vim/ftdetect' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect'
'misc/vim/ftdetect/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect/snakemake.vim'
'misc/vim/ftplugin' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin'
'misc/vim/ftplugin/snakemake' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake'
'misc/vim/ftplugin/snakemake/folding.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/folding.vim'
'misc/vim/ftplugin/snakemake/sections.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/sections.vim'
'misc/vim/syntax' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/syntax'
'misc/vim/syntax/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/syntax/snakemake.vim'
+ find /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles -type f -name 'README.*' -print -delete
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/README.md
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip /usr/bin/strip
+ /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2
Bytecompiling .py files below /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13 using python3.13
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/hash.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/hash.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/storage.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/local.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/groups/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/simple/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/argparse.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/configfile.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/git.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/tbdstring.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/typing.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/workdir_handler.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/__init__.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/conda.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/conda.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/containerize.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/env_modules.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/singularity.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/singularity.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/dryrun.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/google_lifesciences_helper.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/local.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/touch.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/linting/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/linting/__pycache__/links.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/linting/__pycache__/rules.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/linting/__pycache__/snakefiles.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/AzBlob.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/EGA.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/FTP.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/GS.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/HTTP.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/NCBI.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/S3.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/S3Mocked.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/SFTP.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/XRootD.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/dropbox.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/gfal.cpython-313.pyc: rewriting with normalized contents
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/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/remote/__pycache__/iRODS.cpython-313.pyc: rewriting with normalized contents
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/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/categories.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/common.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/configfiles.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/packages.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/results.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/rulegraph.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/rules.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/runtimes.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/data/__pycache__/timeline.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/template/components/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/template/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/__pycache__/common.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/__pycache__/common.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/__pycache__/rulegraph_spec.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/script/__pycache__/__init__.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/enums.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/types.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/types.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/template_rendering/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/template_rendering/__pycache__/jinja2.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/template_rendering/__pycache__/yte.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/unit_tests/templates/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/unit_tests/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/__main__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/_version.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/benchmark.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/script/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/checkpoints.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/api.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/cli.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/cwl.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/cli.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/exceptions.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/gui.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/dag.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/decorators.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/dag.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/io.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/io.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/ioflags.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/jobs.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/ioutils.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/jobs.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/output_index.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/logging.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/modules.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/parser.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/notebook.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/path_modifier.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/notebook.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/path_modifier.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/profiles.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/persistence.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/parser.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/resources.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/persistence.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/ruleinfo.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/shell.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/shell.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/sourcecache.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/scheduler.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/sourcecache.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/target_jobs.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/spawn_jobs.cpython-313.pyc: replacing with normalized version
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/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/spawn_jobs.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.pyc: replacing with normalized version
Scanned 59 directories and 368 files,
processed 130 inodes,
129 modified (42 replaced + 87 rewritten),
0 unsupported format, 0 errors
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.WIUOBz
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd snakemake-8.18.2
+ '[' '!' -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-modules ']'
+ PATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
+ PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages
+ _PYTHONSITE=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages
+ PYTHONDONTWRITEBYTECODE=1
+ /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc41.x86_64-pyproject-modules -e '*.tests*' -e snakemake.executors.flux
Check import: snakemake
Check import: snakemake.api
Check import: snakemake.benchmark
Check import: snakemake.caching
Check import: snakemake.caching.hash
Check import: snakemake.caching.local
Check import: snakemake.caching.storage
Check import: snakemake.checkpoints
Check import: snakemake.cli
Check import: snakemake.common
Check import: snakemake.common.argparse
Check import: snakemake.common.configfile
Check import: snakemake.common.git
Check import: snakemake.common.tbdstring
Check import: snakemake.common.typing
Check import: snakemake.common.workdir_handler
Check import: snakemake.cwl
Check import: snakemake.dag
Check import: snakemake.decorators
Check import: snakemake.deployment
Check import: snakemake.deployment.conda
Check import: snakemake.deployment.containerize
Check import: snakemake.deployment.env_modules
Check import: snakemake.deployment.singularity
Check import: snakemake.exceptions
Check import: snakemake.executors
Check import: snakemake.executors.dryrun
Check import: snakemake.executors.google_lifesciences_helper
Check import: snakemake.executors.local
Check import: snakemake.executors.touch
Check import: snakemake.gui
Check import: snakemake.io
Check import: snakemake.ioflags
Check import: snakemake.ioutils
Check import: snakemake.jobs
Check import: snakemake.linting
Check import: snakemake.linting.links
Check import: snakemake.linting.rules
Check import: snakemake.linting.snakefiles
Check import: snakemake.logging
Check import: snakemake.modules
Check import: snakemake.notebook
Check import: snakemake.output_index
Check import: snakemake.parser
Check import: snakemake.path_modifier
Check import: snakemake.persistence
Check import: snakemake.profiles
Check import: snakemake.remote
Check import: snakemake.remote.AzBlob
Check import: snakemake.remote.EGA
Check import: snakemake.remote.FTP
Check import: snakemake.remote.GS
Check import: snakemake.remote.HTTP
Check import: snakemake.remote.NCBI
Check import: snakemake.remote.S3
Check import: snakemake.remote.S3Mocked
Check import: snakemake.remote.SFTP
Check import: snakemake.remote.XRootD
Check import: snakemake.remote.dropbox
Check import: snakemake.remote.gfal
Check import: snakemake.remote.gridftp
Check import: snakemake.remote.iRODS
Check import: snakemake.remote.webdav
Check import: snakemake.remote.zenodo
Check import: snakemake.report
Check import: snakemake.report.common
Check import: snakemake.report.html_reporter
Check import: snakemake.report.html_reporter.common
Check import: snakemake.report.html_reporter.data
Check import: snakemake.report.html_reporter.data.categories
Check import: snakemake.report.html_reporter.data.common
Check import: snakemake.report.html_reporter.data.configfiles
Check import: snakemake.report.html_reporter.data.packages
Check import: snakemake.report.html_reporter.data.results
Check import: snakemake.report.html_reporter.data.rulegraph
Check import: snakemake.report.html_reporter.data.rules
Check import: snakemake.report.html_reporter.data.runtimes
Check import: snakemake.report.html_reporter.data.timeline
Check import: snakemake.report.html_reporter.template
Check import: snakemake.report.html_reporter.template.components
Check import: snakemake.report.rulegraph_spec
Check import: snakemake.resources
Check import: snakemake.ruleinfo
Check import: snakemake.rules
Check import: snakemake.scheduler
Check import: snakemake.script
Check import: snakemake.settings
Check import: snakemake.settings.enums
Check import: snakemake.settings.types
Check import: snakemake.shell
Check import: snakemake.sourcecache
Check import: snakemake.spawn_jobs
Check import: snakemake.storage
Check import: snakemake.target_jobs
Check import: snakemake.template_rendering
Check import: snakemake.template_rendering.jinja2
Check import: snakemake.template_rendering.yte
Check import: snakemake.unit_tests
Check import: snakemake.unit_tests.templates
Check import: snakemake.utils
Check import: snakemake.workflow
Check import: snakemake.wrapper
+ k='not test_ancient'
+ k='not test_ancient and not test_containerized'
+ k='not test_ancient and not test_containerized and not test_default_storage'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda'
+ k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda and not test_group_job_resources_with_pipe'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ PATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
+ PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages
+ PYTHONDONTWRITEBYTECODE=1
+ PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir'
+ PYTEST_XDIST_AUTO_NUM_WORKERS=2
+ /usr/bin/pytest -v -k 'not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda and not test_group_job_resources_with_pipe' tests/tests.py tests/test_expand.py tests/test_io.py tests/test_schema.py tests/test_linting.py tests/test_executor_test_suite.py
============================= test session starts ==============================
platform linux -- Python 3.13.0, pytest-8.3.1, pluggy-1.5.0 -- /usr/bin/python3
cachedir: .pytest_cache
rootdir: /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2
configfile: pyproject.toml
plugins: mock-3.14.0
collecting ... collected 343 items / 60 deselected / 283 selected
tests/tests.py::test_list_untracked PASSED [ 0%]
tests/tests.py::test_delete_all_output PASSED [ 0%]
tests/tests.py::test_github_issue_14 PASSED [ 1%]
tests/tests.py::test_issue956 PASSED [ 1%]
tests/tests.py::test01 PASSED [ 1%]
tests/tests.py::test02 PASSED [ 2%]
tests/tests.py::test03 PASSED [ 2%]
tests/tests.py::test04 PASSED [ 2%]
tests/tests.py::test05 PASSED [ 3%]
tests/tests.py::test06 PASSED [ 3%]
tests/tests.py::test07 PASSED [ 3%]
tests/tests.py::test08 PASSED [ 4%]
tests/tests.py::test09 PASSED [ 4%]
tests/tests.py::test10 PASSED [ 4%]
tests/tests.py::test11 PASSED [ 5%]
tests/tests.py::test12 PASSED [ 5%]
tests/tests.py::test13 PASSED [ 6%]
tests/tests.py::test15 PASSED [ 6%]
tests/tests.py::test_set_threads PASSED [ 6%]
tests/tests.py::test_glpk_solver PASSED [ 7%]
tests/tests.py::test_coin_solver PASSED [ 7%]
tests/tests.py::test_directory PASSED [ 7%]
tests/tests.py::test_directory2 PASSED [ 8%]
tests/tests.py::test_set_resources_complex_profile PASSED [ 8%]
tests/tests.py::test_set_resources_complex_cli PASSED [ 8%]
tests/tests.py::test_params PASSED [ 9%]
tests/tests.py::test_same_wildcard PASSED [ 9%]
tests/tests.py::test_conditional PASSED [ 9%]
tests/tests.py::test_unpack_dict PASSED [ 10%]
tests/tests.py::test_unpack_list PASSED [ 10%]
tests/tests.py::test_shell PASSED [ 10%]
tests/tests.py::test_temp PASSED [ 11%]
tests/tests.py::test_keyword_list PASSED [ 11%]
tests/tests.py::test_globwildcards PASSED [ 12%]
tests/tests.py::test_ioutils PASSED [ 12%]
tests/tests.py::test_local_import PASSED [ 12%]
tests/tests.py::test_ruledeps PASSED [ 13%]
tests/tests.py::test_url_include SKIPPED (no internet connection) [ 13%]
tests/tests.py::test_touch PASSED [ 13%]
tests/tests.py::test_touch_flag_with_directories PASSED [ 14%]
tests/tests.py::test_config PASSED [ 14%]
tests/tests.py::test_update_config PASSED [ 14%]
tests/tests.py::test_config_merging PASSED [ 15%]
tests/tests.py::test_wildcard_keyword PASSED [ 15%]
tests/tests.py::test_benchmark PASSED [ 15%]
tests/tests.py::test_benchmark_jsonl PASSED [ 16%]
tests/tests.py::test_temp_expand PASSED [ 16%]
tests/tests.py::test_wildcard_count_ambiguity PASSED [ 16%]
tests/tests.py::test_multiple_includes PASSED [ 17%]
tests/tests.py::test_name_override PASSED [ 17%]
tests/tests.py::test_yaml_config PASSED [ 18%]
tests/tests.py::test_symlink_temp SKIPPED (This does not work reliab...) [ 18%]
tests/tests.py::test_empty_include PASSED [ 18%]
tests/tests.py::test_shadow PASSED [ 19%]
tests/tests.py::test_shadow_copy PASSED [ 19%]
tests/tests.py::test_shadow_prefix PASSED [ 19%]
tests/tests.py::test_shadowed_log PASSED [ 20%]
tests/tests.py::test_until PASSED [ 20%]
tests/tests.py::test_omitfrom PASSED [ 20%]
tests/tests.py::test_nonstr_params PASSED [ 21%]
tests/tests.py::test_delete_output PASSED [ 21%]
tests/tests.py::test_input_generator PASSED [ 21%]
tests/tests.py::test_symlink_time_handling PASSED [ 22%]
tests/tests.py::test_protected_symlink_output PASSED [ 22%]
tests/tests.py::test_get_log_none PASSED [ 22%]
tests/tests.py::test_get_log_both PASSED [ 23%]
tests/tests.py::test_get_log_stderr PASSED [ 23%]
tests/tests.py::test_get_log_stdout PASSED [ 24%]
tests/tests.py::test_get_log_complex PASSED [ 24%]
tests/tests.py::test_spaces_in_fnames PASSED [ 24%]
tests/tests.py::test_deferred_func_eval PASSED [ 25%]
tests/tests.py::test_format_params PASSED [ 25%]
tests/tests.py::test_rule_defined_in_for_loop PASSED [ 25%]
tests/tests.py::test_issue381 PASSED [ 26%]
tests/tests.py::test_format_wildcards PASSED [ 26%]
tests/tests.py::test_with_parentheses PASSED [ 26%]
tests/tests.py::test_dup_out_patterns PASSED [ 27%]
tests/tests.py::test_issue2826_failed_binary_logs PASSED [ 27%]
tests/tests.py::test_threads PASSED [ 27%]
tests/tests.py::test_threads0 PASSED [ 28%]
tests/tests.py::test_run_namedlist PASSED [ 28%]
tests/tests.py::test_profile PASSED [ 28%]
tests/tests.py::test_singularity SKIPPED (no internet connection) [ 29%]
tests/tests.py::test_singularity_cluster SKIPPED (no internet connec...) [ 29%]
tests/tests.py::test_singularity_invalid PASSED [ 30%]
tests/tests.py::test_singularity_module_invalid PASSED [ 30%]
tests/tests.py::test_singularity_none SKIPPED (no internet connection) [ 30%]
tests/tests.py::test_singularity_global SKIPPED (no internet connection) [ 31%]
tests/tests.py::test_issue612 PASSED [ 31%]
tests/tests.py::test_bash PASSED [ 31%]
tests/tests.py::test_inoutput_is_path PASSED [ 32%]
tests/tests.py::test_log_input PASSED [ 32%]
tests/tests.py::test_issue805 PASSED [ 32%]
tests/tests.py::test_issue823_1 PASSED [ 33%]
tests/tests.py::test_issue823_2 PASSED [ 33%]
tests/tests.py::test_issue823_3 PASSED [ 33%]
tests/tests.py::test_pathlib PASSED [ 34%]
tests/tests.py::test_pathlib_missing_file PASSED [ 34%]
tests/tests.py::test_group_jobs PASSED [ 34%]
tests/tests.py::test_group_jobs_attempts PASSED [ 35%]
tests/tests.py::test_groups_out_of_jobs PASSED [ 35%]
tests/tests.py::test_group_jobs_resources PASSED [ 36%]
tests/tests.py::test_group_jobs_resources_with_max_threads PASSED [ 36%]
tests/tests.py::test_group_jobs_resources_with_limited_resources PASSED [ 36%]
tests/tests.py::test_global_resource_limits_limit_scheduling_of_groups PASSED [ 37%]
tests/tests.py::test_new_resources_can_be_defined_as_local PASSED [ 37%]
tests/tests.py::test_resources_can_be_overwritten_as_global PASSED [ 37%]
tests/tests.py::test_scopes_submitted_to_cluster PASSED [ 38%]
tests/tests.py::test_resources_submitted_to_cluster PASSED [ 38%]
tests/tests.py::test_excluded_resources_not_submitted_to_cluster PASSED [ 38%]
tests/tests.py::test_multicomp_group_jobs PASSED [ 39%]
tests/tests.py::test_group_job_fail PASSED [ 39%]
tests/tests.py::test_pipes_simple PASSED [ 39%]
tests/tests.py::test_pipes_multiple PASSED [ 40%]
tests/tests.py::test_pipes_fail PASSED [ 40%]
tests/tests.py::test_validate PASSED [ 40%]
tests/tests.py::test_validate_fail PASSED [ 41%]
tests/tests.py::test_issue854 PASSED [ 41%]
tests/tests.py::test_issue850 PASSED [ 42%]
tests/tests.py::test_issue860 PASSED [ 42%]
tests/tests.py::test_issue894 PASSED [ 42%]
tests/tests.py::test_issue584 PASSED [ 43%]
tests/tests.py::test_issue912 PASSED [ 43%]
tests/tests.py::test_job_properties PASSED [ 43%]
tests/tests.py::test_issue916 PASSED [ 44%]
tests/tests.py::test_issue930 PASSED [ 44%]
tests/tests.py::test_convert_to_cwl SKIPPED (Temporarily disable unt...) [ 44%]
tests/tests.py::test_issue1037 PASSED [ 45%]
tests/tests.py::test_issue1046 PASSED [ 45%]
tests/tests.py::test_checkpoints PASSED [ 45%]
tests/tests.py::test_checkpoints_dir PASSED [ 46%]
tests/tests.py::test_issue1092 PASSED [ 46%]
tests/tests.py::test_issue958 PASSED [ 46%]
tests/tests.py::test_issue471 PASSED [ 47%]
tests/tests.py::test_issue1085 PASSED [ 47%]
tests/tests.py::test_pipes2 PASSED [ 48%]
tests/tests.py::test_expand_flag PASSED [ 48%]
tests/tests.py::test_default_resources PASSED [ 48%]
tests/tests.py::test_tmpdir PASSED [ 49%]
tests/tests.py::test_tmpdir_default PASSED [ 49%]
tests/tests.py::test_issue1284 PASSED [ 49%]
tests/tests.py::test_issue1281 PASSED [ 50%]
tests/tests.py::test_filegraph PASSED [ 50%]
tests/tests.py::test_batch PASSED [ 50%]
tests/tests.py::test_batch_final PASSED [ 51%]
tests/tests.py::test_batch_fail PASSED [ 51%]
tests/tests.py::test_github_issue52 PASSED [ 51%]
tests/tests.py::test_envvars PASSED [ 52%]
tests/tests.py::test_github_issue105 PASSED [ 52%]
tests/tests.py::test_github_issue413 PASSED [ 53%]
tests/tests.py::test_github_issue627 PASSED [ 53%]
tests/tests.py::test_github_issue727 PASSED [ 53%]
tests/tests.py::test_github_issue988 PASSED [ 54%]
tests/tests.py::test_github_issue1062 SKIPPED (ftp connections curre...) [ 54%]
tests/tests.py::test_output_file_cache PASSED [ 54%]
tests/tests.py::test_multiext PASSED [ 55%]
tests/tests.py::test_core_dependent_threads PASSED [ 55%]
tests/tests.py::test_env_modules PASSED [ 55%]
tests/tests.py::test_container SKIPPED (no internet connection) [ 56%]
tests/tests.py::test_string_resources PASSED [ 56%]
tests/tests.py::test_github_issue456 PASSED [ 56%]
tests/tests.py::test_scatter_gather PASSED [ 57%]
tests/tests.py::test_parsing_terminal_comment_following_statement PASSED [ 57%]
tests/tests.py::test_github_issue640 PASSED [ 57%]
tests/tests.py::test_generate_unit_tests PASSED [ 58%]
tests/tests.py::test_paramspace PASSED [ 58%]
tests/tests.py::test_paramspace_single_wildcard PASSED [ 59%]
tests/tests.py::test_github_issue806 PASSED [ 59%]
tests/tests.py::test_containerize PASSED [ 59%]
tests/tests.py::test_long_shell PASSED [ 60%]
tests/tests.py::test_modules_all PASSED [ 60%]
tests/tests.py::test_module_nested PASSED [ 60%]
tests/tests.py::test_modules_all_exclude_1 PASSED [ 61%]
tests/tests.py::test_modules_all_exclude_2 PASSED [ 61%]
tests/tests.py::test_modules_specific PASSED [ 61%]
tests/tests.py::test_use_rule_same_module PASSED [ 62%]
tests/tests.py::test_module_no_prefixing_modified_paths PASSED [ 62%]
tests/tests.py::test_module_worfklow_namespacing PASSED [ 62%]
tests/tests.py::test_handover PASSED [ 63%]
tests/tests.py::test_source_path PASSED [ 63%]
tests/tests.py::test_filesep_windows_targets SKIPPED (Windows stuff) [ 63%]
tests/tests.py::test_filesep_on_windows SKIPPED (Windows stuff) [ 64%]
tests/tests.py::test_set_resources PASSED [ 64%]
tests/tests.py::test_github_issue1069 PASSED [ 65%]
tests/tests.py::test_max_jobs_per_timespan PASSED [ 65%]
tests/tests.py::test_touch_pipeline_with_temp_dir PASSED [ 65%]
tests/tests.py::test_all_temp PASSED [ 66%]
tests/tests.py::test_github_issue1158 PASSED [ 66%]
tests/tests.py::test_checkpoint_allowed_rules PASSED [ 66%]
tests/tests.py::test_modules_ruledeps_inheritance PASSED [ 67%]
tests/tests.py::test_issue1331 PASSED [ 67%]
tests/tests.py::test_default_target PASSED [ 67%]
tests/tests.py::test_cache_multioutput PASSED [ 68%]
tests/tests.py::test_github_issue1384 PASSED [ 68%]
tests/tests.py::test_template_engine PASSED [ 68%]
tests/tests.py::test_groupid_expand_local PASSED [ 69%]
tests/tests.py::test_groupid_expand_cluster PASSED [ 69%]
tests/tests.py::test_service_jobs PASSED [ 69%]
tests/tests.py::test_incomplete_params PASSED [ 70%]
tests/tests.py::test_github_issue261 PASSED [ 70%]
tests/tests.py::test_pipe_depend PASSED [ 71%]
tests/tests.py::test_pipe_depend_target_file PASSED [ 71%]
tests/tests.py::test_github_issue1500 PASSED [ 71%]
tests/tests.py::test_github_issue1542 PASSED [ 72%]
tests/tests.py::test_github_issue1550 PASSED [ 72%]
tests/tests.py::test_github_issue1498 PASSED [ 72%]
tests/tests.py::test_lazy_resources PASSED [ 73%]
tests/tests.py::test_cleanup_metadata_fail PASSED [ 73%]
tests/tests.py::test_github_issue1389 PASSED [ 73%]
tests/tests.py::test_github_issue2142 PASSED [ 74%]
tests/tests.py::test_ensure_nonempty_fail PASSED [ 74%]
tests/tests.py::test_ensure_success PASSED [ 74%]
tests/tests.py::test_ensure_checksum_fail PASSED [ 75%]
tests/tests.py::test_fstring PASSED [ 75%]
tests/tests.py::test_github_issue1261 PASSED [ 75%]
tests/tests.py::test_retries PASSED [ 76%]
tests/tests.py::test_retries_not_overriden PASSED [ 76%]
tests/tests.py::test_module_input_func PASSED [ 77%]
tests/tests.py::test_github_issue1618 PASSED [ 77%]
tests/tests.py::test_github_issue1818 PASSED [ 77%]
tests/tests.py::test_match_by_wildcard_names PASSED [ 78%]
tests/tests.py::test_github_issue929 PASSED [ 78%]
tests/tests.py::test_github_issue1882 PASSED [ 78%]
tests/tests.py::test_inferred_resources PASSED [ 79%]
tests/tests.py::test_workflow_profile PASSED [ 79%]
tests/tests.py::test_no_workflow_profile PASSED [ 79%]
tests/tests.py::test_runtime_conversion_from_workflow_profile PASSED [ 80%]
tests/tests.py::test_localrule PASSED [ 80%]
tests/tests.py::test_module_wildcard_constraints PASSED [ 80%]
tests/tests.py::test_config_yte PASSED [ 81%]
tests/tests.py::test_missing_file_dryrun PASSED [ 81%]
tests/tests.py::test_issue1256 PASSED [ 81%]
tests/tests.py::test_resource_string_in_cli_or_profile PASSED [ 82%]
tests/tests.py::test_resource_tbdstring PASSED [ 82%]
tests/tests.py::test_queue_input PASSED [ 83%]
tests/tests.py::test_queue_input_dryrun PASSED [ 83%]
tests/tests.py::test_queue_input_forceall PASSED [ 83%]
tests/tests.py::test_issue2685 PASSED [ 84%]
tests/tests.py::test_set_resources_complex PASSED [ 84%]
tests/tests.py::test_set_resources_human_readable PASSED [ 84%]
tests/tests.py::test_call_inner PASSED [ 85%]
tests/tests.py::test_update_flag PASSED [ 85%]
tests/tests.py::test_list_input_changes PASSED [ 85%]
tests/tests.py::test_summary PASSED [ 86%]
tests/tests.py::test_exists PASSED [ 86%]
tests/tests.py::test_handle_storage_multi_consumers PASSED [ 86%]
tests/tests.py::test_github_issue2732 PASSED [ 87%]
tests/tests.py::test_expand_list_of_functions PASSED [ 87%]
tests/tests.py::test_scheduler_sequential_all_cores PASSED [ 87%]
tests/tests.py::test_checkpoint_open PASSED [ 88%]
tests/test_expand.py::test_simple_expand PASSED [ 88%]
tests/test_expand.py::test_allow_missing PASSED [ 89%]
tests/test_io.py::test_wildcard_regex PASSED [ 89%]
tests/test_io.py::test_expand PASSED [ 89%]
tests/test_schema.py::test_config PASSED [ 90%]
tests/test_schema.py::test_config_ref PASSED [ 90%]
tests/test_schema.py::test_dataframe PASSED [ 90%]
tests/test_linting.py::test_lint[absolute_paths-positive] PASSED [ 91%]
tests/test_linting.py::test_lint[absolute_paths-negative] PASSED [ 91%]
tests/test_linting.py::test_lint[envvars-positive] PASSED [ 91%]
tests/test_linting.py::test_lint[envvars-negative] PASSED [ 92%]
tests/test_linting.py::test_lint[iofile_by_index-positive] PASSED [ 92%]
tests/test_linting.py::test_lint[iofile_by_index-negative] PASSED [ 92%]
tests/test_linting.py::test_lint[log_directive-positive] PASSED [ 93%]
tests/test_linting.py::test_lint[log_directive-negative] PASSED [ 93%]
tests/test_linting.py::test_lint[long_run-positive] PASSED [ 93%]
tests/test_linting.py::test_lint[long_run-negative] PASSED [ 94%]
tests/test_linting.py::test_lint[missing_software_definition-positive] PASSED [ 94%]
tests/test_linting.py::test_lint[missing_software_definition-negative] PASSED [ 95%]
tests/test_linting.py::test_lint[mixed_func_and_rules-positive] PASSED [ 95%]
tests/test_linting.py::test_lint[mixed_func_and_rules-negative] PASSED [ 95%]
tests/test_linting.py::test_lint[not_used_params-positive] PASSED [ 96%]
tests/test_linting.py::test_lint[not_used_params-negative] PASSED [ 96%]
tests/test_linting.py::test_lint[params_prefix-positive] PASSED [ 96%]
tests/test_linting.py::test_lint[params_prefix-negative] PASSED [ 97%]
tests/test_linting.py::test_lint[path_add-positive] PASSED [ 97%]
tests/test_linting.py::test_lint[path_add-negative] PASSED [ 97%]
tests/test_linting.py::test_lint[singularity-positive] PASSED [ 98%]
tests/test_linting.py::test_lint[singularity-negative] PASSED [ 98%]
tests/test_linting.py::test_lint[tab_usage-positive] PASSED [ 98%]
tests/test_linting.py::test_lint[tab_usage-negative] PASSED [ 99%]
tests/test_executor_test_suite.py::TestWorkflows::test_simple_workflow PASSED [ 99%]
tests/test_executor_test_suite.py::TestWorkflows::test_group_workflow PASSED [100%]
=============================== warnings summary ===============================
tests/tests.py::test_list_untracked
<frozen importlib._bootstrap>:488: DeprecationWarning: Type google.protobuf.pyext._message.ScalarMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14.
tests/tests.py::test_list_untracked
<frozen importlib._bootstrap>:488: DeprecationWarning: Type google.protobuf.pyext._message.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14.
tests/tests.py::test_list_untracked
/usr/lib64/python3.13/site-packages/google/protobuf/internal/well_known_types.py:92: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC).
_EPOCH_DATETIME = datetime.utcfromtimestamp(0)
tests/tests.py: 4 warnings
tests/test_schema.py: 12 warnings
/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake/utils.py:52: DeprecationWarning: jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need.
from jsonschema import validators, RefResolver
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=== 272 passed, 11 skipped, 60 deselected, 19 warnings in 401.99s (0:06:41) ====
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: snakemake-8.18.2-4.fc41.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.OWQgnq
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ cd snakemake-8.18.2
+ DOCDIR=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake
+ cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/CHANGELOG.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake
+ cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake
+ cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README-nano.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake
+ cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README-vim.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: python3.13dist(snakemake) = 8.18.2 python3dist(snakemake) = 8.18.2 snakemake = 8.18.2-4.fc41 vim-snakemake = 8.18.2-4.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: (python3.13dist(conda-inject) < 2~~ with python3.13dist(conda-inject) >= 1.3.1) (python3.13dist(dpath) < 3~~ with python3.13dist(dpath) >= 2.1.6) (python3.13dist(jinja2) < 4~~ with python3.13dist(jinja2) >= 3) (python3.13dist(pulp) < 2.10~~ with python3.13dist(pulp) >= 2.3.1) (python3.13dist(requests) < 3~~ with python3.13dist(requests) >= 2.8.1) (python3.13dist(smart-open) < 8~~ with python3.13dist(smart-open) >= 4) (python3.13dist(snakemake-interface-common) < 2~~ with python3.13dist(snakemake-interface-common) >= 1.17) (python3.13dist(snakemake-interface-executor-plugins) < 10~~ with python3.13dist(snakemake-interface-executor-plugins) >= 9.2) (python3.13dist(snakemake-interface-report-plugins) < 2~~ with python3.13dist(snakemake-interface-report-plugins) >= 1) (python3.13dist(snakemake-interface-storage-plugins) < 4~~ with python3.13dist(snakemake-interface-storage-plugins) >= 3.2.3) (python3.13dist(toposort) < 2~~ with python3.13dist(toposort) >= 1.10) (python3.13dist(yte) < 2~~ with python3.13dist(yte) >= 1.5.1) /usr/bin/python3 python(abi) = 3.13 python3.13dist(appdirs) python3.13dist(configargparse) python3.13dist(connection-pool) >= 0.0.3 python3.13dist(datrie) python3.13dist(docutils) python3.13dist(gitpython) python3.13dist(humanfriendly) python3.13dist(immutables) python3.13dist(jsonschema) python3.13dist(nbformat) python3.13dist(packaging) python3.13dist(psutil) python3.13dist(pyyaml) python3.13dist(reretry) python3.13dist(stopit) python3.13dist(tabulate) python3.13dist(throttler) python3.13dist(wrapt)
Obsoletes: snakemake+azure < 8.1.0-1 snakemake+google-cloud < 8.1.0-1 snakemake-doc < 8.2.1-2
Processing files: snakemake+reports-8.18.2-4.fc41.noarch
Provides: python3.13dist(snakemake[reports]) = 8.18.2 python3dist(snakemake[reports]) = 8.18.2 snakemake+reports = 8.18.2-4.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.13 python3.13dist(pygments)
Processing files: snakemake+messaging-8.18.2-4.fc41.noarch
Provides: python3.13dist(snakemake[messaging]) = 8.18.2 python3dist(snakemake[messaging]) = 8.18.2 snakemake+messaging = 8.18.2-4.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.13 python3.13dist(slack-sdk)
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT
Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc41.src.rpm
Wrote: /builddir/build/RPMS/snakemake+reports-8.18.2-4.fc41.noarch.rpm
Wrote: /builddir/build/RPMS/snakemake+messaging-8.18.2-4.fc41.noarch.rpm
Wrote: /builddir/build/RPMS/snakemake-8.18.2-4.fc41.noarch.rpm
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.sMUOXv
+ umask 022
+ cd /builddir/build/BUILD/snakemake-8.18.2-build
+ test -d /builddir/build/BUILD/snakemake-8.18.2-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/snakemake-8.18.2-build
+ rm -rf /builddir/build/BUILD/snakemake-8.18.2-build
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild snakemake-8.18.2-4.fc41.src.rpm
Finish: build phase for snakemake-8.18.2-4.fc41.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-41-x86_64-1728851955.517208/root/var/log/dnf5.log
INFO: Done(/var/lib/copr-rpmbuild/results/snakemake-8.18.2-4.fc41.src.rpm) Config(child) 7 minutes 45 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
"packages": [
{
"name": "snakemake+reports",
"epoch": null,
"version": "8.18.2",
"release": "4.fc41",
"arch": "noarch"
},
{
"name": "snakemake",
"epoch": null,
"version": "8.18.2",
"release": "4.fc41",
"arch": "src"
},
{
"name": "snakemake",
"epoch": null,
"version": "8.18.2",
"release": "4.fc41",
"arch": "noarch"
},
{
"name": "snakemake+messaging",
"epoch": null,
"version": "8.18.2",
"release": "4.fc41",
"arch": "noarch"
}
]
}
RPMResults finished