Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c196' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6132019-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 0.68 PID: 5469 Logging PID: 5470 Task: {'appstream': False, 'background': True, 'build_id': 6132019, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '1edffd7819d86b6c213486ac1182ee85f5fd9cbb', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/ProDy', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'ProDy', 'package_version': '2.4.0-3', 'project_dirname': 'automatic-obsoletes', 'project_name': 'automatic-obsoletes', 'project_owner': 'torsava', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/torsava/automatic-obsoletes/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'torsava/automatic-obsoletes--https://src.fedoraproject.org/user/churchyard', 'source_json': {}, 'source_type': None, 'submitter': 'https://src.fedoraproject.org/user/churchyard', 'tags': [], 'task_id': '6132019-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/ProDy /var/lib/copr-rpmbuild/workspace/workdir-aloc45bo/ProDy --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/ProDy', '/var/lib/copr-rpmbuild/workspace/workdir-aloc45bo/ProDy', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-aloc45bo/ProDy'... Running: git checkout 1edffd7819d86b6c213486ac1182ee85f5fd9cbb -- cmd: ['git', 'checkout', '1edffd7819d86b6c213486ac1182ee85f5fd9cbb', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-aloc45bo/ProDy rc: 0 stdout: stderr: Note: switching to '1edffd7819d86b6c213486ac1182ee85f5fd9cbb'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 1edffd7 automatic import of ProDy Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cwd: /var/lib/copr-rpmbuild/workspace/workdir-aloc45bo/ProDy rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading ProDy-2.4.0.tar.gz INFO: Calling: curl -H Pragma: -o ProDy-2.4.0.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/torsava/automatic-obsoletes/ProDy/ProDy-2.4.0.tar.gz/md5/cd8edbbd2ebe14a8f62fbb5c685f2e82/ProDy-2.4.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 21.2M 100 21.2M 0 0 3182k 0 0:00:06 0:00:06 --:--:-- 3179k INFO: Reading stdout from command: md5sum ProDy-2.4.0.tar.gz Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-aloc45bo/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-aloc45bo/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1688204662.982875 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-aloc45bo/ProDy/ProDy.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1688204662.982875/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 16 MB/s | 15 MB 00:00 fedora 4.9 MB/s | 71 MB 00:14 Last metadata expiration check: 0:00:03 ago on Sat Jul 1 09:44:35 2023. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: dnf-plugins-core noarch 4.4.1-3.fc39 copr_base 39 k python3-dnf noarch 4.16.1-2.fc39 copr_base 564 k Installing dependencies: alternatives x86_64 1.24-1.fc39 fedora 39 k audit-libs x86_64 3.1.1-2.fc39 copr_base 117 k basesystem noarch 11-17.fc39 fedora 7.0 k bash x86_64 5.2.15-3.fc38 fedora 1.8 M bzip2-libs x86_64 1.0.8-13.fc38 fedora 41 k ca-certificates noarch 2023.2.60-2.fc38 fedora 845 k coreutils x86_64 9.3-1.fc39 fedora 1.1 M coreutils-common x86_64 9.3-1.fc39 fedora 2.1 M crypto-policies noarch 20230614-1.git5f3458e.fc39 fedora 94 k curl x86_64 8.1.2-1.fc39 fedora 345 k cyrus-sasl-lib x86_64 2.1.28-10.fc39 fedora 792 k dbus-libs x86_64 1:1.14.8-1.fc39 fedora 156 k dnf-data noarch 4.16.1-2.fc39 copr_base 39 k elfutils-default-yama-scope noarch 0.189-2.fc39 fedora 15 k elfutils-libelf x86_64 0.189-2.fc39 fedora 196 k elfutils-libs x86_64 0.189-2.fc39 fedora 260 k expat x86_64 2.5.0-2.fc38 fedora 110 k fedora-gpg-keys noarch 39-0.1 fedora 126 k fedora-release noarch 39-0.14 fedora 6.6 k fedora-release-common noarch 39-0.14 fedora 17 k fedora-release-identity-basic noarch 39-0.14 fedora 7.4 k fedora-repos noarch 39-0.1 fedora 9.4 k fedora-repos-rawhide noarch 39-0.1 fedora 9.0 k file-libs x86_64 5.44-3.fc39 copr_base 731 k filesystem x86_64 3.18-4.fc39 fedora 1.1 M findutils x86_64 1:4.9.0-4.fc39 fedora 491 k fmt x86_64 10.0.0-2.fc39 fedora 127 k gawk x86_64 5.2.2-1.fc39 fedora 1.1 M gdbm-libs x86_64 1:1.23-3.fc38 fedora 56 k glib2 x86_64 2.76.3-1.fc39 fedora 2.8 M glibc x86_64 2.37.9000-14.fc39 fedora 2.2 M glibc-common x86_64 2.37.9000-14.fc39 fedora 339 k glibc-minimal-langpack x86_64 2.37.9000-14.fc39 fedora 59 k gmp x86_64 1:6.2.1-4.fc38 fedora 313 k gnupg2 x86_64 2.4.2-2.fc39 fedora 2.6 M gnutls x86_64 3.8.0-6.fc39 fedora 1.1 M gpgme x86_64 1.20.0-3.fc39 copr_base 210 k grep x86_64 3.11-1.fc39 fedora 298 k ima-evm-utils x86_64 1.5-1.fc39 fedora 63 k json-c x86_64 0.16-4.fc38 fedora 41 k keyutils-libs x86_64 1.6.1-6.fc38 fedora 31 k krb5-libs x86_64 1.21-1.fc39 fedora 765 k libacl x86_64 2.3.1-7.fc39 fedora 23 k libarchive x86_64 3.6.1-5.fc39 fedora 400 k libassuan x86_64 2.5.6-1.fc39 fedora 67 k libattr x86_64 2.5.1-7.fc39 fedora 18 k libb2 x86_64 0.98.1-8.fc38 fedora 25 k libblkid x86_64 2.39.1-2.fc39 copr_base 117 k libbrotli x86_64 1.0.9-11.fc38 copr_base 317 k libcap x86_64 2.48-6.fc38 fedora 67 k libcap-ng x86_64 0.8.3-5.fc38 copr_base 33 k libcom_err x86_64 1.47.0-1.fc39 fedora 26 k libcomps x86_64 0.1.19-1.fc39 copr_base 77 k libcurl x86_64 8.1.2-1.fc39 fedora 323 k libdnf x86_64 0.70.1-3.fc39 copr_base 658 k libdnf5 x86_64 5.0.14-2.fc39 fedora 870 k libeconf x86_64 0.4.0-5.fc38 fedora 27 k libevent x86_64 2.1.12-8.fc38 fedora 257 k libffi x86_64 3.4.4-2.fc38 fedora 38 k libfsverity x86_64 1.4-9.fc38 fedora 19 k libgcc x86_64 13.1.1-4.fc39 fedora 107 k libgcrypt x86_64 1.10.2-1.fc39 fedora 514 k libgomp x86_64 13.1.1-4.fc39 fedora 317 k libgpg-error x86_64 1.47-1.fc39 fedora 230 k libidn2 x86_64 2.3.4-2.fc38 fedora 160 k libksba x86_64 1.6.4-1.fc39 fedora 159 k libmodulemd x86_64 2.15.0-3.fc39 fedora 232 k libmount x86_64 2.39.1-2.fc39 copr_base 155 k libnghttp2 x86_64 1.54.0-1.fc39 fedora 75 k libnsl2 x86_64 2.0.0-5.fc38 fedora 30 k libpsl x86_64 0.21.2-3.fc39 fedora 63 k librepo x86_64 1.15.1-2.fc38 copr_base 97 k libreport-filesystem noarch 2.17.11-1.fc39 copr_base 15 k libselinux x86_64 3.5-4.fc39 copr_base 87 k libsemanage x86_64 3.5-2.fc39 copr_base 120 k libsepol x86_64 3.5-1.fc39 fedora 324 k libsigsegv x86_64 2.14-4.fc38 fedora 27 k libsmartcols x86_64 2.39.1-2.fc39 copr_base 68 k libsolv x86_64 0.7.24-4.fc39 fedora 425 k libssh x86_64 0.10.5-1.fc39 fedora 211 k libssh-config noarch 0.10.5-1.fc39 fedora 9.0 k libstdc++ x86_64 13.1.1-4.fc39 fedora 861 k libtasn1 x86_64 4.19.0-2.fc38 fedora 74 k libtirpc x86_64 1.3.3-1.rc1.fc39 fedora 93 k libunistring x86_64 1.1-3.fc38 fedora 545 k libunistring1.0 x86_64 1.0-1.fc38 fedora 539 k libuuid x86_64 2.39.1-2.fc39 copr_base 29 k libverto x86_64 0.3.2-5.fc38 fedora 21 k libxcrypt x86_64 4.4.35-1.fc39 fedora 119 k libxml2 x86_64 2.10.4-1.fc39 copr_base 701 k libyaml x86_64 0.2.5-9.fc38 fedora 59 k libzstd x86_64 1.5.5-1.fc39 fedora 308 k lua-libs x86_64 5.4.4-9.fc39 fedora 133 k lz4-libs x86_64 1.9.4-3.fc39 fedora 67 k mpdecimal x86_64 2.5.1-6.fc38 fedora 89 k mpfr x86_64 4.1.1-3.fc38 fedora 600 k ncurses-base noarch 6.4-5.20230520.fc39 fedora 88 k ncurses-libs x86_64 6.4-5.20230520.fc39 fedora 336 k nettle x86_64 3.9.1-1.fc39 fedora 425 k npth x86_64 1.6-13.fc39 fedora 24 k openldap x86_64 2.6.4-2.fc39 fedora 255 k openssl-libs x86_64 1:3.0.8-2.fc39 fedora 2.1 M p11-kit x86_64 0.24.1-6.fc38 fedora 359 k p11-kit-trust x86_64 0.24.1-6.fc38 fedora 136 k pcre2 x86_64 10.42-1.fc38.1 fedora 234 k pcre2-syntax noarch 10.42-1.fc38.1 fedora 144 k popt x86_64 1.19-2.fc38 fedora 67 k publicsuffix-list-dafsa noarch 20230614-1.fc39 fedora 57 k python-pip-wheel noarch 23.1.2-1.fc39 copr_base 1.4 M python-setuptools-wheel noarch 67.7.2-2.fc39 copr_base 662 k python3 x86_64 3.11.4-1.fc39 fedora 28 k python3-dateutil noarch 1:2.8.2-6.fc39 copr_base 349 k python3-dbus x86_64 1.3.2-2.fc38 copr_base 147 k python3-distro noarch 1.8.0-4.fc39 copr_base 46 k python3-dnf-plugins-core noarch 4.4.1-3.fc39 copr_base 285 k python3-gpg x86_64 1.20.0-3.fc39 copr_base 282 k python3-hawkey x86_64 0.70.1-3.fc39 copr_base 108 k python3-libcomps x86_64 0.1.19-1.fc39 copr_base 48 k python3-libdnf x86_64 0.70.1-3.fc39 copr_base 820 k python3-libs x86_64 3.11.4-1.fc39 fedora 9.6 M python3-rpm x86_64 4.18.91-7.fc39 copr_base 68 k python3-six noarch 1.16.0-9.fc38 copr_base 43 k python3-systemd x86_64 235-3.fc39 copr_base 102 k readline x86_64 8.2-3.fc38 fedora 212 k rpm x86_64 4.18.91-7.fc39 copr_base 503 k rpm-build-libs x86_64 4.18.91-7.fc39 copr_base 96 k rpm-libs x86_64 4.18.91-7.fc39 copr_base 309 k rpm-sequoia x86_64 1.4.1-1.fc39 fedora 843 k rpm-sign-libs x86_64 4.18.91-7.fc39 copr_base 27 k sed x86_64 4.8-12.fc38 fedora 306 k setup noarch 2.14.3-3.fc39 fedora 152 k shadow-utils x86_64 2:4.13-7.fc39 fedora 1.3 M sqlite-libs x86_64 3.41.2-3.fc39 fedora 669 k systemd-libs x86_64 253.5-6.fc39 fedora 652 k tpm2-tss x86_64 4.0.1-3.fc38 fedora 675 k tzdata noarch 2023c-1.fc39 fedora 718 k xz-libs x86_64 5.4.3-1.fc39 fedora 108 k zchunk-libs x86_64 1.3.1-1.fc39 fedora 52 k zlib x86_64 1.2.13-3.fc38 fedora 95 k Transaction Summary ================================================================================ Install 141 Packages Total download size: 59 M Installed size: 205 M Downloading Packages: (1/141): dnf-data-4.16.1-2.fc39.noarch.rpm 660 kB/s | 39 kB 00:00 (2/141): audit-libs-3.1.1-2.fc39.x86_64.rpm 1.9 MB/s | 117 kB 00:00 (3/141): dnf-plugins-core-4.4.1-3.fc39.noarch.r 608 kB/s | 39 kB 00:00 (4/141): gpgme-1.20.0-3.fc39.x86_64.rpm 5.2 MB/s | 210 kB 00:00 (5/141): file-libs-5.44-3.fc39.x86_64.rpm 16 MB/s | 731 kB 00:00 (6/141): libblkid-2.39.1-2.fc39.x86_64.rpm 2.6 MB/s | 117 kB 00:00 (7/141): libbrotli-1.0.9-11.fc38.x86_64.rpm 14 MB/s | 317 kB 00:00 (8/141): libcap-ng-0.8.3-5.fc38.x86_64.rpm 1.5 MB/s | 33 kB 00:00 (9/141): libcomps-0.1.19-1.fc39.x86_64.rpm 3.6 MB/s | 77 kB 00:00 (10/141): libdnf-0.70.1-3.fc39.x86_64.rpm 31 MB/s | 658 kB 00:00 (11/141): libmount-2.39.1-2.fc39.x86_64.rpm 8.0 MB/s | 155 kB 00:00 (12/141): librepo-1.15.1-2.fc38.x86_64.rpm 6.2 MB/s | 97 kB 00:00 (13/141): libreport-filesystem-2.17.11-1.fc39.n 1.7 MB/s | 15 kB 00:00 (14/141): libselinux-3.5-4.fc39.x86_64.rpm 8.9 MB/s | 87 kB 00:00 (15/141): libsemanage-3.5-2.fc39.x86_64.rpm 11 MB/s | 120 kB 00:00 (16/141): libsmartcols-2.39.1-2.fc39.x86_64.rpm 7.1 MB/s | 68 kB 00:00 (17/141): libuuid-2.39.1-2.fc39.x86_64.rpm 3.3 MB/s | 29 kB 00:00 (18/141): libxml2-2.10.4-1.fc39.x86_64.rpm 44 MB/s | 701 kB 00:00 (19/141): python-setuptools-wheel-67.7.2-2.fc39 25 MB/s | 662 kB 00:00 (20/141): python-pip-wheel-23.1.2-1.fc39.noarch 29 MB/s | 1.4 MB 00:00 (21/141): python3-dateutil-2.8.2-6.fc39.noarch. 7.8 MB/s | 349 kB 00:00 (22/141): python3-dbus-1.3.2-2.fc38.x86_64.rpm 5.4 MB/s | 147 kB 00:00 (23/141): python3-distro-1.8.0-4.fc39.noarch.rp 5.1 MB/s | 46 kB 00:00 (24/141): python3-dnf-4.16.1-2.fc39.noarch.rpm 39 MB/s | 564 kB 00:00 (25/141): python3-dnf-plugins-core-4.4.1-3.fc39 18 MB/s | 285 kB 00:00 (26/141): python3-gpg-1.20.0-3.fc39.x86_64.rpm 18 MB/s | 282 kB 00:00 (27/141): python3-hawkey-0.70.1-3.fc39.x86_64.r 9.9 MB/s | 108 kB 00:00 (28/141): python3-libcomps-0.1.19-1.fc39.x86_64 4.4 MB/s | 48 kB 00:00 (29/141): python3-libdnf-0.70.1-3.fc39.x86_64.r 43 MB/s | 820 kB 00:00 (30/141): python3-rpm-4.18.91-7.fc39.x86_64.rpm 5.1 MB/s | 68 kB 00:00 (31/141): python3-six-1.16.0-9.fc38.noarch.rpm 3.9 MB/s | 43 kB 00:00 (32/141): python3-systemd-235-3.fc39.x86_64.rpm 11 MB/s | 102 kB 00:00 (33/141): rpm-4.18.91-7.fc39.x86_64.rpm 35 MB/s | 503 kB 00:00 (34/141): rpm-build-libs-4.18.91-7.fc39.x86_64. 6.5 MB/s | 96 kB 00:00 (35/141): rpm-libs-4.18.91-7.fc39.x86_64.rpm 24 MB/s | 309 kB 00:00 (36/141): rpm-sign-libs-4.18.91-7.fc39.x86_64.r 3.0 MB/s | 27 kB 00:00 (37/141): basesystem-11-17.fc39.noarch.rpm 47 kB/s | 7.0 kB 00:00 (38/141): alternatives-1.24-1.fc39.x86_64.rpm 139 kB/s | 39 kB 00:00 (39/141): bzip2-libs-1.0.8-13.fc38.x86_64.rpm 225 kB/s | 41 kB 00:00 (40/141): ca-certificates-2023.2.60-2.fc38.noar 1.7 MB/s | 845 kB 00:00 (41/141): coreutils-9.3-1.fc39.x86_64.rpm 2.5 MB/s | 1.1 MB 00:00 (42/141): bash-5.2.15-3.fc38.x86_64.rpm 2.3 MB/s | 1.8 MB 00:00 (43/141): crypto-policies-20230614-1.git5f3458e 1.2 MB/s | 94 kB 00:00 (44/141): curl-8.1.2-1.fc39.x86_64.rpm 2.0 MB/s | 345 kB 00:00 (45/141): cyrus-sasl-lib-2.1.28-10.fc39.x86_64. 6.7 MB/s | 792 kB 00:00 (46/141): coreutils-common-9.3-1.fc39.x86_64.rp 7.8 MB/s | 2.1 MB 00:00 (47/141): elfutils-default-yama-scope-0.189-2.f 203 kB/s | 15 kB 00:00 (48/141): dbus-libs-1.14.8-1.fc39.x86_64.rpm 1.9 MB/s | 156 kB 00:00 (49/141): elfutils-libelf-0.189-2.fc39.x86_64.r 2.3 MB/s | 196 kB 00:00 (50/141): elfutils-libs-0.189-2.fc39.x86_64.rpm 2.7 MB/s | 260 kB 00:00 (51/141): expat-2.5.0-2.fc38.x86_64.rpm 1.2 MB/s | 110 kB 00:00 (52/141): fedora-gpg-keys-39-0.1.noarch.rpm 1.5 MB/s | 126 kB 00:00 (53/141): fedora-release-39-0.14.noarch.rpm 86 kB/s | 6.6 kB 00:00 (54/141): fedora-release-common-39-0.14.noarch. 219 kB/s | 17 kB 00:00 (55/141): fedora-release-identity-basic-39-0.14 94 kB/s | 7.4 kB 00:00 (56/141): fedora-repos-39-0.1.noarch.rpm 122 kB/s | 9.4 kB 00:00 (57/141): fedora-repos-rawhide-39-0.1.noarch.rp 117 kB/s | 9.0 kB 00:00 (58/141): fmt-10.0.0-2.fc39.x86_64.rpm 1.5 MB/s | 127 kB 00:00 (59/141): filesystem-3.18-4.fc39.x86_64.rpm 10 MB/s | 1.1 MB 00:00 (60/141): findutils-4.9.0-4.fc39.x86_64.rpm 5.1 MB/s | 491 kB 00:00 (61/141): gdbm-libs-1.23-3.fc38.x86_64.rpm 714 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00:00 (121/141): openssl-libs-3.0.8-2.fc39.x86_64.rpm 18 MB/s | 2.1 MB 00:00 (122/141): p11-kit-0.24.1-6.fc38.x86_64.rpm 3.5 MB/s | 359 kB 00:00 (123/141): p11-kit-trust-0.24.1-6.fc38.x86_64.r 1.7 MB/s | 136 kB 00:00 (124/141): pcre2-syntax-10.42-1.fc38.1.noarch.r 1.6 MB/s | 144 kB 00:00 (125/141): popt-1.19-2.fc38.x86_64.rpm 833 kB/s | 67 kB 00:00 (126/141): pcre2-10.42-1.fc38.1.x86_64.rpm 1.3 MB/s | 234 kB 00:00 (127/141): python3-3.11.4-1.fc39.x86_64.rpm 357 kB/s | 28 kB 00:00 (128/141): publicsuffix-list-dafsa-20230614-1.f 610 kB/s | 57 kB 00:00 (129/141): readline-8.2-3.fc38.x86_64.rpm 2.0 MB/s | 212 kB 00:00 (130/141): sed-4.8-12.fc38.x86_64.rpm 3.5 MB/s | 306 kB 00:00 (131/141): setup-2.14.3-3.fc39.noarch.rpm 1.9 MB/s | 152 kB 00:00 (132/141): rpm-sequoia-1.4.1-1.fc39.x86_64.rpm 2.5 MB/s | 843 kB 00:00 (133/141): sqlite-libs-3.41.2-3.fc39.x86_64.rpm 3.2 MB/s | 669 kB 00:00 (134/141): shadow-utils-4.13-7.fc39.x86_64.rpm 4.7 MB/s | 1.3 MB 00:00 (135/141): tpm2-tss-4.0.1-3.fc38.x86_64.rpm 5.7 MB/s | 675 kB 00:00 (136/141): systemd-libs-253.5-6.fc39.x86_64.rpm 3.3 MB/s | 652 kB 00:00 (137/141): python3-libs-3.11.4-1.fc39.x86_64.rp 13 MB/s | 9.6 MB 00:00 (138/141): tzdata-2023c-1.fc39.noarch.rpm 7.5 MB/s | 718 kB 00:00 (139/141): zchunk-libs-1.3.1-1.fc39.x86_64.rpm 651 kB/s | 52 kB 00:00 (140/141): xz-libs-5.4.3-1.fc39.x86_64.rpm 1.0 MB/s | 108 kB 00:00 (141/141): zlib-1.2.13-3.fc38.x86_64.rpm 1.0 MB/s | 95 kB 00:00 -------------------------------------------------------------------------------- Total 12 MB/s | 59 MB 00:04 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary (0x18B8E74C) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Key imported successfullyImporting GPG key 0xEB10B464: Userid : "Fedora (38) " Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-4.fc39.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.1.1-4.fc39.x86_64 1/141 Running scriptlet: libgcc-13.1.1-4.fc39.x86_64 1/141 Installing : tzdata-2023c-1.fc39.noarch 2/141 Installing : crypto-policies-20230614-1.git5f3458e.fc39.noarc 3/141 Running scriptlet: crypto-policies-20230614-1.git5f3458e.fc39.noarc 3/141 Installing : fedora-release-identity-basic-39-0.14.noarch 4/141 Installing : publicsuffix-list-dafsa-20230614-1.fc39.noarch 5/141 Installing : pcre2-syntax-10.42-1.fc38.1.noarch 6/141 Installing : ncurses-base-6.4-5.20230520.fc39.noarch 7/141 Installing : libssh-config-0.10.5-1.fc39.noarch 8/141 Installing : fedora-gpg-keys-39-0.1.noarch 9/141 Installing : fedora-release-39-0.14.noarch 10/141 Installing : fedora-release-common-39-0.14.noarch 11/141 Installing : fedora-repos-rawhide-39-0.1.noarch 12/141 Installing : fedora-repos-39-0.1.noarch 13/141 Installing : setup-2.14.3-3.fc39.noarch 14/141 Running scriptlet: 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/etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : rpm-build-libs-4.18.91-7.fc39.x86_64 121/141 Installing : rpm-sign-libs-4.18.91-7.fc39.x86_64 122/141 Installing : python-setuptools-wheel-67.7.2-2.fc39.noarch 123/141 Installing : python3-3.11.4-1.fc39.x86_64 124/141 Installing : python3-libs-3.11.4-1.fc39.x86_64 125/141 Installing : python3-libdnf-0.70.1-3.fc39.x86_64 126/141 Installing : python3-hawkey-0.70.1-3.fc39.x86_64 127/141 Installing : python3-libcomps-0.1.19-1.fc39.x86_64 128/141 Installing : python3-dbus-1.3.2-2.fc38.x86_64 129/141 Installing : python3-distro-1.8.0-4.fc39.noarch 130/141 Installing : python3-gpg-1.20.0-3.fc39.x86_64 131/141 Installing : python3-rpm-4.18.91-7.fc39.x86_64 132/141 Installing : python3-six-1.16.0-9.fc38.noarch 133/141 Installing : python3-dateutil-1:2.8.2-6.fc39.noarch 134/141 Installing : python3-systemd-235-3.fc39.x86_64 135/141 Installing : libreport-filesystem-2.17.11-1.fc39.noarch 136/141 Installing : dnf-data-4.16.1-2.fc39.noarch 137/141 Installing : python3-dnf-4.16.1-2.fc39.noarch 138/141 Installing : python3-dnf-plugins-core-4.4.1-3.fc39.noarch 139/141 Installing : dnf-plugins-core-4.4.1-3.fc39.noarch 140/141 Running scriptlet: rpm-4.18.91-7.fc39.x86_64 141/141 Installing : rpm-4.18.91-7.fc39.x86_64 141/141 Running scriptlet: filesystem-3.18-4.fc39.x86_64 141/141 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 141/141 Running scriptlet: rpm-4.18.91-7.fc39.x86_64 141/141 Verifying : audit-libs-3.1.1-2.fc39.x86_64 1/141 Verifying : dnf-data-4.16.1-2.fc39.noarch 2/141 Verifying : dnf-plugins-core-4.4.1-3.fc39.noarch 3/141 Verifying : file-libs-5.44-3.fc39.x86_64 4/141 Verifying : gpgme-1.20.0-3.fc39.x86_64 5/141 Verifying : libblkid-2.39.1-2.fc39.x86_64 6/141 Verifying : libbrotli-1.0.9-11.fc38.x86_64 7/141 Verifying : libcap-ng-0.8.3-5.fc38.x86_64 8/141 Verifying : libcomps-0.1.19-1.fc39.x86_64 9/141 Verifying : libdnf-0.70.1-3.fc39.x86_64 10/141 Verifying : libmount-2.39.1-2.fc39.x86_64 11/141 Verifying : librepo-1.15.1-2.fc38.x86_64 12/141 Verifying : libreport-filesystem-2.17.11-1.fc39.noarch 13/141 Verifying : libselinux-3.5-4.fc39.x86_64 14/141 Verifying : libsemanage-3.5-2.fc39.x86_64 15/141 Verifying : libsmartcols-2.39.1-2.fc39.x86_64 16/141 Verifying : libuuid-2.39.1-2.fc39.x86_64 17/141 Verifying : libxml2-2.10.4-1.fc39.x86_64 18/141 Verifying : python-pip-wheel-23.1.2-1.fc39.noarch 19/141 Verifying : python-setuptools-wheel-67.7.2-2.fc39.noarch 20/141 Verifying : python3-dateutil-1:2.8.2-6.fc39.noarch 21/141 Verifying : python3-dbus-1.3.2-2.fc38.x86_64 22/141 Verifying : python3-distro-1.8.0-4.fc39.noarch 23/141 Verifying : python3-dnf-4.16.1-2.fc39.noarch 24/141 Verifying : python3-dnf-plugins-core-4.4.1-3.fc39.noarch 25/141 Verifying : python3-gpg-1.20.0-3.fc39.x86_64 26/141 Verifying : python3-hawkey-0.70.1-3.fc39.x86_64 27/141 Verifying : python3-libcomps-0.1.19-1.fc39.x86_64 28/141 Verifying : python3-libdnf-0.70.1-3.fc39.x86_64 29/141 Verifying : python3-rpm-4.18.91-7.fc39.x86_64 30/141 Verifying : python3-six-1.16.0-9.fc38.noarch 31/141 Verifying : python3-systemd-235-3.fc39.x86_64 32/141 Verifying : rpm-4.18.91-7.fc39.x86_64 33/141 Verifying : rpm-build-libs-4.18.91-7.fc39.x86_64 34/141 Verifying : rpm-libs-4.18.91-7.fc39.x86_64 35/141 Verifying : rpm-sign-libs-4.18.91-7.fc39.x86_64 36/141 Verifying : alternatives-1.24-1.fc39.x86_64 37/141 Verifying : basesystem-11-17.fc39.noarch 38/141 Verifying : bash-5.2.15-3.fc38.x86_64 39/141 Verifying : bzip2-libs-1.0.8-13.fc38.x86_64 40/141 Verifying : ca-certificates-2023.2.60-2.fc38.noarch 41/141 Verifying : coreutils-9.3-1.fc39.x86_64 42/141 Verifying : coreutils-common-9.3-1.fc39.x86_64 43/141 Verifying : crypto-policies-20230614-1.git5f3458e.fc39.noarc 44/141 Verifying : curl-8.1.2-1.fc39.x86_64 45/141 Verifying : cyrus-sasl-lib-2.1.28-10.fc39.x86_64 46/141 Verifying : dbus-libs-1:1.14.8-1.fc39.x86_64 47/141 Verifying : elfutils-default-yama-scope-0.189-2.fc39.noarch 48/141 Verifying : elfutils-libelf-0.189-2.fc39.x86_64 49/141 Verifying : elfutils-libs-0.189-2.fc39.x86_64 50/141 Verifying : expat-2.5.0-2.fc38.x86_64 51/141 Verifying : fedora-gpg-keys-39-0.1.noarch 52/141 Verifying : fedora-release-39-0.14.noarch 53/141 Verifying : fedora-release-common-39-0.14.noarch 54/141 Verifying : fedora-release-identity-basic-39-0.14.noarch 55/141 Verifying : fedora-repos-39-0.1.noarch 56/141 Verifying : fedora-repos-rawhide-39-0.1.noarch 57/141 Verifying : filesystem-3.18-4.fc39.x86_64 58/141 Verifying : findutils-1:4.9.0-4.fc39.x86_64 59/141 Verifying : fmt-10.0.0-2.fc39.x86_64 60/141 Verifying : gawk-5.2.2-1.fc39.x86_64 61/141 Verifying : gdbm-libs-1:1.23-3.fc38.x86_64 62/141 Verifying : glib2-2.76.3-1.fc39.x86_64 63/141 Verifying : glibc-2.37.9000-14.fc39.x86_64 64/141 Verifying : glibc-common-2.37.9000-14.fc39.x86_64 65/141 Verifying : glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 66/141 Verifying : gmp-1:6.2.1-4.fc38.x86_64 67/141 Verifying : gnupg2-2.4.2-2.fc39.x86_64 68/141 Verifying : gnutls-3.8.0-6.fc39.x86_64 69/141 Verifying : grep-3.11-1.fc39.x86_64 70/141 Verifying : ima-evm-utils-1.5-1.fc39.x86_64 71/141 Verifying : json-c-0.16-4.fc38.x86_64 72/141 Verifying : keyutils-libs-1.6.1-6.fc38.x86_64 73/141 Verifying : krb5-libs-1.21-1.fc39.x86_64 74/141 Verifying : libacl-2.3.1-7.fc39.x86_64 75/141 Verifying : libarchive-3.6.1-5.fc39.x86_64 76/141 Verifying : libassuan-2.5.6-1.fc39.x86_64 77/141 Verifying : libattr-2.5.1-7.fc39.x86_64 78/141 Verifying : libb2-0.98.1-8.fc38.x86_64 79/141 Verifying : libcap-2.48-6.fc38.x86_64 80/141 Verifying : libcom_err-1.47.0-1.fc39.x86_64 81/141 Verifying : libcurl-8.1.2-1.fc39.x86_64 82/141 Verifying : libdnf5-5.0.14-2.fc39.x86_64 83/141 Verifying : libeconf-0.4.0-5.fc38.x86_64 84/141 Verifying : libevent-2.1.12-8.fc38.x86_64 85/141 Verifying : libffi-3.4.4-2.fc38.x86_64 86/141 Verifying : libfsverity-1.4-9.fc38.x86_64 87/141 Verifying : libgcc-13.1.1-4.fc39.x86_64 88/141 Verifying : libgcrypt-1.10.2-1.fc39.x86_64 89/141 Verifying : libgomp-13.1.1-4.fc39.x86_64 90/141 Verifying : libgpg-error-1.47-1.fc39.x86_64 91/141 Verifying : libidn2-2.3.4-2.fc38.x86_64 92/141 Verifying : libksba-1.6.4-1.fc39.x86_64 93/141 Verifying : libmodulemd-2.15.0-3.fc39.x86_64 94/141 Verifying : libnghttp2-1.54.0-1.fc39.x86_64 95/141 Verifying : libnsl2-2.0.0-5.fc38.x86_64 96/141 Verifying : libpsl-0.21.2-3.fc39.x86_64 97/141 Verifying : libsepol-3.5-1.fc39.x86_64 98/141 Verifying : libsigsegv-2.14-4.fc38.x86_64 99/141 Verifying : libsolv-0.7.24-4.fc39.x86_64 100/141 Verifying : libssh-0.10.5-1.fc39.x86_64 101/141 Verifying : libssh-config-0.10.5-1.fc39.noarch 102/141 Verifying : libstdc++-13.1.1-4.fc39.x86_64 103/141 Verifying : libtasn1-4.19.0-2.fc38.x86_64 104/141 Verifying : libtirpc-1.3.3-1.rc1.fc39.x86_64 105/141 Verifying : libunistring-1.1-3.fc38.x86_64 106/141 Verifying : libunistring1.0-1.0-1.fc38.x86_64 107/141 Verifying : libverto-0.3.2-5.fc38.x86_64 108/141 Verifying : libxcrypt-4.4.35-1.fc39.x86_64 109/141 Verifying : libyaml-0.2.5-9.fc38.x86_64 110/141 Verifying : libzstd-1.5.5-1.fc39.x86_64 111/141 Verifying : lua-libs-5.4.4-9.fc39.x86_64 112/141 Verifying : lz4-libs-1.9.4-3.fc39.x86_64 113/141 Verifying : mpdecimal-2.5.1-6.fc38.x86_64 114/141 Verifying : mpfr-4.1.1-3.fc38.x86_64 115/141 Verifying : ncurses-base-6.4-5.20230520.fc39.noarch 116/141 Verifying : ncurses-libs-6.4-5.20230520.fc39.x86_64 117/141 Verifying : nettle-3.9.1-1.fc39.x86_64 118/141 Verifying : npth-1.6-13.fc39.x86_64 119/141 Verifying : openldap-2.6.4-2.fc39.x86_64 120/141 Verifying : openssl-libs-1:3.0.8-2.fc39.x86_64 121/141 Verifying : p11-kit-0.24.1-6.fc38.x86_64 122/141 Verifying : p11-kit-trust-0.24.1-6.fc38.x86_64 123/141 Verifying : pcre2-10.42-1.fc38.1.x86_64 124/141 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 125/141 Verifying : popt-1.19-2.fc38.x86_64 126/141 Verifying : publicsuffix-list-dafsa-20230614-1.fc39.noarch 127/141 Verifying : python3-3.11.4-1.fc39.x86_64 128/141 Verifying : python3-libs-3.11.4-1.fc39.x86_64 129/141 Verifying : readline-8.2-3.fc38.x86_64 130/141 Verifying : rpm-sequoia-1.4.1-1.fc39.x86_64 131/141 Verifying : sed-4.8-12.fc38.x86_64 132/141 Verifying : setup-2.14.3-3.fc39.noarch 133/141 Verifying : shadow-utils-2:4.13-7.fc39.x86_64 134/141 Verifying : sqlite-libs-3.41.2-3.fc39.x86_64 135/141 Verifying : systemd-libs-253.5-6.fc39.x86_64 136/141 Verifying : tpm2-tss-4.0.1-3.fc38.x86_64 137/141 Verifying : tzdata-2023c-1.fc39.noarch 138/141 Verifying : xz-libs-5.4.3-1.fc39.x86_64 139/141 Verifying : zchunk-libs-1.3.1-1.fc39.x86_64 140/141 Verifying : zlib-1.2.13-3.fc38.x86_64 141/141 Installed products updated. Installed: alternatives-1.24-1.fc39.x86_64 audit-libs-3.1.1-2.fc39.x86_64 basesystem-11-17.fc39.noarch bash-5.2.15-3.fc38.x86_64 bzip2-libs-1.0.8-13.fc38.x86_64 ca-certificates-2023.2.60-2.fc38.noarch coreutils-9.3-1.fc39.x86_64 coreutils-common-9.3-1.fc39.x86_64 crypto-policies-20230614-1.git5f3458e.fc39.noarch curl-8.1.2-1.fc39.x86_64 cyrus-sasl-lib-2.1.28-10.fc39.x86_64 dbus-libs-1:1.14.8-1.fc39.x86_64 dnf-data-4.16.1-2.fc39.noarch dnf-plugins-core-4.4.1-3.fc39.noarch elfutils-default-yama-scope-0.189-2.fc39.noarch elfutils-libelf-0.189-2.fc39.x86_64 elfutils-libs-0.189-2.fc39.x86_64 expat-2.5.0-2.fc38.x86_64 fedora-gpg-keys-39-0.1.noarch fedora-release-39-0.14.noarch fedora-release-common-39-0.14.noarch fedora-release-identity-basic-39-0.14.noarch fedora-repos-39-0.1.noarch fedora-repos-rawhide-39-0.1.noarch file-libs-5.44-3.fc39.x86_64 filesystem-3.18-4.fc39.x86_64 findutils-1:4.9.0-4.fc39.x86_64 fmt-10.0.0-2.fc39.x86_64 gawk-5.2.2-1.fc39.x86_64 gdbm-libs-1:1.23-3.fc38.x86_64 glib2-2.76.3-1.fc39.x86_64 glibc-2.37.9000-14.fc39.x86_64 glibc-common-2.37.9000-14.fc39.x86_64 glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 gmp-1:6.2.1-4.fc38.x86_64 gnupg2-2.4.2-2.fc39.x86_64 gnutls-3.8.0-6.fc39.x86_64 gpgme-1.20.0-3.fc39.x86_64 grep-3.11-1.fc39.x86_64 ima-evm-utils-1.5-1.fc39.x86_64 json-c-0.16-4.fc38.x86_64 keyutils-libs-1.6.1-6.fc38.x86_64 krb5-libs-1.21-1.fc39.x86_64 libacl-2.3.1-7.fc39.x86_64 libarchive-3.6.1-5.fc39.x86_64 libassuan-2.5.6-1.fc39.x86_64 libattr-2.5.1-7.fc39.x86_64 libb2-0.98.1-8.fc38.x86_64 libblkid-2.39.1-2.fc39.x86_64 libbrotli-1.0.9-11.fc38.x86_64 libcap-2.48-6.fc38.x86_64 libcap-ng-0.8.3-5.fc38.x86_64 libcom_err-1.47.0-1.fc39.x86_64 libcomps-0.1.19-1.fc39.x86_64 libcurl-8.1.2-1.fc39.x86_64 libdnf-0.70.1-3.fc39.x86_64 libdnf5-5.0.14-2.fc39.x86_64 libeconf-0.4.0-5.fc38.x86_64 libevent-2.1.12-8.fc38.x86_64 libffi-3.4.4-2.fc38.x86_64 libfsverity-1.4-9.fc38.x86_64 libgcc-13.1.1-4.fc39.x86_64 libgcrypt-1.10.2-1.fc39.x86_64 libgomp-13.1.1-4.fc39.x86_64 libgpg-error-1.47-1.fc39.x86_64 libidn2-2.3.4-2.fc38.x86_64 libksba-1.6.4-1.fc39.x86_64 libmodulemd-2.15.0-3.fc39.x86_64 libmount-2.39.1-2.fc39.x86_64 libnghttp2-1.54.0-1.fc39.x86_64 libnsl2-2.0.0-5.fc38.x86_64 libpsl-0.21.2-3.fc39.x86_64 librepo-1.15.1-2.fc38.x86_64 libreport-filesystem-2.17.11-1.fc39.noarch libselinux-3.5-4.fc39.x86_64 libsemanage-3.5-2.fc39.x86_64 libsepol-3.5-1.fc39.x86_64 libsigsegv-2.14-4.fc38.x86_64 libsmartcols-2.39.1-2.fc39.x86_64 libsolv-0.7.24-4.fc39.x86_64 libssh-0.10.5-1.fc39.x86_64 libssh-config-0.10.5-1.fc39.noarch libstdc++-13.1.1-4.fc39.x86_64 libtasn1-4.19.0-2.fc38.x86_64 libtirpc-1.3.3-1.rc1.fc39.x86_64 libunistring-1.1-3.fc38.x86_64 libunistring1.0-1.0-1.fc38.x86_64 libuuid-2.39.1-2.fc39.x86_64 libverto-0.3.2-5.fc38.x86_64 libxcrypt-4.4.35-1.fc39.x86_64 libxml2-2.10.4-1.fc39.x86_64 libyaml-0.2.5-9.fc38.x86_64 libzstd-1.5.5-1.fc39.x86_64 lua-libs-5.4.4-9.fc39.x86_64 lz4-libs-1.9.4-3.fc39.x86_64 mpdecimal-2.5.1-6.fc38.x86_64 mpfr-4.1.1-3.fc38.x86_64 ncurses-base-6.4-5.20230520.fc39.noarch ncurses-libs-6.4-5.20230520.fc39.x86_64 nettle-3.9.1-1.fc39.x86_64 npth-1.6-13.fc39.x86_64 openldap-2.6.4-2.fc39.x86_64 openssl-libs-1:3.0.8-2.fc39.x86_64 p11-kit-0.24.1-6.fc38.x86_64 p11-kit-trust-0.24.1-6.fc38.x86_64 pcre2-10.42-1.fc38.1.x86_64 pcre2-syntax-10.42-1.fc38.1.noarch popt-1.19-2.fc38.x86_64 publicsuffix-list-dafsa-20230614-1.fc39.noarch python-pip-wheel-23.1.2-1.fc39.noarch python-setuptools-wheel-67.7.2-2.fc39.noarch python3-3.11.4-1.fc39.x86_64 python3-dateutil-1:2.8.2-6.fc39.noarch python3-dbus-1.3.2-2.fc38.x86_64 python3-distro-1.8.0-4.fc39.noarch python3-dnf-4.16.1-2.fc39.noarch python3-dnf-plugins-core-4.4.1-3.fc39.noarch python3-gpg-1.20.0-3.fc39.x86_64 python3-hawkey-0.70.1-3.fc39.x86_64 python3-libcomps-0.1.19-1.fc39.x86_64 python3-libdnf-0.70.1-3.fc39.x86_64 python3-libs-3.11.4-1.fc39.x86_64 python3-rpm-4.18.91-7.fc39.x86_64 python3-six-1.16.0-9.fc38.noarch python3-systemd-235-3.fc39.x86_64 readline-8.2-3.fc38.x86_64 rpm-4.18.91-7.fc39.x86_64 rpm-build-libs-4.18.91-7.fc39.x86_64 rpm-libs-4.18.91-7.fc39.x86_64 rpm-sequoia-1.4.1-1.fc39.x86_64 rpm-sign-libs-4.18.91-7.fc39.x86_64 sed-4.8-12.fc38.x86_64 setup-2.14.3-3.fc39.noarch shadow-utils-2:4.13-7.fc39.x86_64 sqlite-libs-3.41.2-3.fc39.x86_64 systemd-libs-253.5-6.fc39.x86_64 tpm2-tss-4.0.1-3.fc38.x86_64 tzdata-2023c-1.fc39.noarch xz-libs-5.4.3-1.fc39.x86_64 zchunk-libs-1.3.1-1.fc39.x86_64 zlib-1.2.13-3.fc38.x86_64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1688204662.982875/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (direct choice) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 44 MB/s | 15 MB 00:00 fedora 23 MB/s | 71 MB 00:03 Last metadata expiration check: 0:00:03 ago on Sat Jul 1 09:45:26 2023. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.15-3.fc38 fedora 1.8 M bzip2 x86_64 1.0.8-13.fc38 fedora 52 k coreutils x86_64 9.3-1.fc39 fedora 1.1 M cpio x86_64 2.14-2.fc39 fedora 279 k diffutils x86_64 3.10-1.fc39 fedora 399 k fedora-release-common noarch 39-0.14 fedora 17 k findutils x86_64 1:4.9.0-4.fc39 fedora 491 k gawk x86_64 5.2.2-1.fc39 fedora 1.1 M glibc-minimal-langpack x86_64 2.37.9000-14.fc39 fedora 59 k grep x86_64 3.11-1.fc39 fedora 298 k gzip x86_64 1.12-3.fc38 fedora 166 k info x86_64 7.0.3-2.fc39 fedora 182 k patch x86_64 2.7.6-21.fc39 fedora 126 k redhat-rpm-config noarch 255-1.fc39 fedora 83 k rpm-build x86_64 4.18.91-7.fc39 copr_base 70 k sed x86_64 4.8-12.fc38 fedora 306 k shadow-utils x86_64 2:4.13-7.fc39 fedora 1.3 M tar x86_64 2:1.34-8.fc39 fedora 888 k unzip x86_64 6.0-60.fc38 fedora 184 k util-linux x86_64 2.39.1-2.fc39 copr_base 1.1 M which x86_64 2.21-39.fc39 fedora 42 k xz x86_64 5.4.3-1.fc39 fedora 555 k Installing dependencies: alternatives x86_64 1.24-1.fc39 fedora 39 k ansible-srpm-macros noarch 1-10.fc39 fedora 21 k audit-libs x86_64 3.1.1-2.fc39 copr_base 117 k authselect x86_64 1.4.2-2.fc38 fedora 144 k authselect-libs x86_64 1.4.2-2.fc38 fedora 249 k basesystem noarch 11-17.fc39 fedora 7.0 k binutils x86_64 2.40-9.fc39 fedora 5.6 M binutils-gold x86_64 2.40-9.fc39 fedora 797 k bzip2-libs x86_64 1.0.8-13.fc38 fedora 41 k ca-certificates noarch 2023.2.60-2.fc38 fedora 845 k coreutils-common x86_64 9.3-1.fc39 fedora 2.1 M cracklib x86_64 2.9.7-31.fc38 fedora 92 k crypto-policies noarch 20230614-1.git5f3458e.fc39 fedora 94 k curl x86_64 8.1.2-1.fc39 fedora 345 k cyrus-sasl-lib x86_64 2.1.28-10.fc39 fedora 792 k debugedit x86_64 5.0-7.fc38 fedora 78 k dwz x86_64 0.15-2.fc38 fedora 135 k ed x86_64 1.19-2.fc38 fedora 78 k efi-srpm-macros noarch 5-8.fc39 fedora 22 k elfutils x86_64 0.189-2.fc39 fedora 536 k elfutils-debuginfod-client x86_64 0.189-2.fc39 fedora 39 k elfutils-default-yama-scope noarch 0.189-2.fc39 fedora 15 k elfutils-libelf x86_64 0.189-2.fc39 fedora 196 k elfutils-libs x86_64 0.189-2.fc39 fedora 260 k fedora-gpg-keys noarch 39-0.1 fedora 126 k fedora-release noarch 39-0.14 fedora 6.6 k fedora-release-identity-basic noarch 39-0.14 fedora 7.4 k fedora-repos noarch 39-0.1 fedora 9.4 k fedora-repos-rawhide noarch 39-0.1 fedora 9.0 k file x86_64 5.44-3.fc39 copr_base 50 k file-libs x86_64 5.44-3.fc39 copr_base 731 k filesystem x86_64 3.18-4.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-11.fc38 fedora 26 k fpc-srpm-macros noarch 1.3-7.fc38 fedora 7.8 k gdb-minimal x86_64 13.2-1.fc39 fedora 4.2 M gdbm-libs x86_64 1:1.23-3.fc38 fedora 56 k ghc-srpm-macros noarch 1.6.1-1.fc38 fedora 8.0 k glibc x86_64 2.37.9000-14.fc39 fedora 2.2 M glibc-common x86_64 2.37.9000-14.fc39 fedora 339 k glibc-gconv-extra x86_64 2.37.9000-14.fc39 fedora 1.6 M gmp x86_64 1:6.2.1-4.fc38 fedora 313 k gnat-srpm-macros noarch 6-2.fc38 fedora 8.8 k go-srpm-macros noarch 3.2.0-3.fc39 fedora 27 k jansson x86_64 2.13.1-6.fc38 fedora 44 k kernel-srpm-macros noarch 1.0-19.fc39 fedora 10 k keyutils-libs x86_64 1.6.1-6.fc38 fedora 31 k krb5-libs x86_64 1.21-1.fc39 fedora 765 k libacl x86_64 2.3.1-7.fc39 fedora 23 k libarchive x86_64 3.6.1-5.fc39 fedora 400 k libattr x86_64 2.5.1-7.fc39 fedora 18 k libblkid x86_64 2.39.1-2.fc39 copr_base 117 k libbrotli x86_64 1.0.9-11.fc38 copr_base 317 k libcap x86_64 2.48-6.fc38 fedora 67 k libcap-ng x86_64 0.8.3-5.fc38 copr_base 33 k libcom_err x86_64 1.47.0-1.fc39 fedora 26 k libcurl x86_64 8.1.2-1.fc39 fedora 323 k libdb x86_64 5.3.28-55.fc38 fedora 758 k libeconf x86_64 0.4.0-5.fc38 fedora 27 k libevent x86_64 2.1.12-8.fc38 fedora 257 k libfdisk x86_64 2.39.1-2.fc39 copr_base 163 k libffi x86_64 3.4.4-2.fc38 fedora 38 k libgcc x86_64 13.1.1-4.fc39 fedora 107 k libgomp x86_64 13.1.1-4.fc39 fedora 317 k libidn2 x86_64 2.3.4-2.fc38 fedora 160 k libmount x86_64 2.39.1-2.fc39 copr_base 155 k libnghttp2 x86_64 1.54.0-1.fc39 fedora 75 k libnsl2 x86_64 2.0.0-5.fc38 fedora 30 k libpkgconf x86_64 1.9.4-2.fc39 fedora 38 k libpsl x86_64 0.21.2-3.fc39 fedora 63 k libpwquality x86_64 1.4.5-4.fc39 copr_base 108 k libselinux x86_64 3.5-4.fc39 copr_base 87 k libsemanage x86_64 3.5-2.fc39 copr_base 120 k libsepol x86_64 3.5-1.fc39 fedora 324 k libsigsegv x86_64 2.14-4.fc38 fedora 27 k libsmartcols x86_64 2.39.1-2.fc39 copr_base 68 k libssh x86_64 0.10.5-1.fc39 fedora 211 k libssh-config noarch 0.10.5-1.fc39 fedora 9.0 k libstdc++ x86_64 13.1.1-4.fc39 fedora 861 k libtasn1 x86_64 4.19.0-2.fc38 fedora 74 k libtirpc x86_64 1.3.3-1.rc1.fc39 fedora 93 k libunistring x86_64 1.1-3.fc38 fedora 545 k libunistring1.0 x86_64 1.0-1.fc38 fedora 539 k libutempter x86_64 1.2.1-9.fc39 fedora 26 k libuuid x86_64 2.39.1-2.fc39 copr_base 29 k libverto x86_64 0.3.2-5.fc38 fedora 21 k libxcrypt x86_64 4.4.35-1.fc39 fedora 119 k libxml2 x86_64 2.10.4-1.fc39 copr_base 701 k libzstd x86_64 1.5.5-1.fc39 fedora 308 k lua-libs x86_64 5.4.4-9.fc39 fedora 133 k lua-srpm-macros noarch 1-8.fc38 fedora 8.6 k lz4-libs x86_64 1.9.4-3.fc39 fedora 67 k mpfr x86_64 4.1.1-3.fc38 fedora 600 k ncurses-base noarch 6.4-5.20230520.fc39 fedora 88 k ncurses-libs x86_64 6.4-5.20230520.fc39 fedora 336 k ocaml-srpm-macros noarch 7-3.fc38 fedora 13 k openblas-srpm-macros noarch 2-13.fc38 fedora 7.5 k openldap x86_64 2.6.4-2.fc39 fedora 255 k openssl-libs x86_64 1:3.0.8-2.fc39 fedora 2.1 M p11-kit x86_64 0.24.1-6.fc38 fedora 359 k p11-kit-trust x86_64 0.24.1-6.fc38 fedora 136 k package-notes-srpm-macros noarch 0.5-8.fc39 fedora 11 k pam x86_64 1.5.3-1.fc39 fedora 547 k pam-libs x86_64 1.5.3-1.fc39 fedora 57 k pcre2 x86_64 10.42-1.fc38.1 fedora 234 k pcre2-syntax noarch 10.42-1.fc38.1 fedora 144 k perl-srpm-macros noarch 1-48.fc38 fedora 8.4 k pkgconf x86_64 1.9.4-2.fc39 fedora 42 k pkgconf-m4 noarch 1.9.4-2.fc39 fedora 14 k pkgconf-pkg-config x86_64 1.9.4-2.fc39 fedora 9.5 k popt x86_64 1.19-2.fc38 fedora 67 k publicsuffix-list-dafsa noarch 20230614-1.fc39 fedora 57 k pyproject-srpm-macros noarch 1.9.0-1.fc39 fedora 15 k python-srpm-macros noarch 3.11-10.fc39 fedora 26 k qt5-srpm-macros noarch 5.15.10-1.fc39 fedora 7.8 k qt6-srpm-macros noarch 6.5.1-1.fc39 fedora 9.2 k readline x86_64 8.2-3.fc38 fedora 212 k rpm x86_64 4.18.91-7.fc39 copr_base 503 k rpm-build-libs x86_64 4.18.91-7.fc39 copr_base 96 k rpm-libs x86_64 4.18.91-7.fc39 copr_base 309 k rpm-sequoia x86_64 1.4.1-1.fc39 fedora 843 k rpmautospec-rpm-macros noarch 0.3.5-2.fc39 copr_base 9.5 k rust-srpm-macros noarch 24-2.fc39 copr_base 13 k setup noarch 2.14.3-3.fc39 fedora 152 k sqlite-libs x86_64 3.41.2-3.fc39 fedora 669 k systemd-libs x86_64 253.5-6.fc39 fedora 652 k tzdata noarch 2023c-1.fc39 fedora 718 k util-linux-core x86_64 2.39.1-2.fc39 copr_base 480 k xxhash-libs x86_64 0.8.1-5.fc39 fedora 40 k xz-libs x86_64 5.4.3-1.fc39 fedora 108 k zip x86_64 3.0-36.fc38 fedora 265 k zlib x86_64 1.2.13-3.fc38 fedora 95 k zstd x86_64 1.5.5-1.fc39 fedora 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 154 Packages Total download size: 53 M Installed size: 181 M Downloading Packages: (1/154): file-5.44-3.fc39.x86_64.rpm 1.0 MB/s | 50 kB 00:00 (2/154): audit-libs-3.1.1-2.fc39.x86_64.rpm 1.7 MB/s | 117 kB 00:00 (3/154): libblkid-2.39.1-2.fc39.x86_64.rpm 5.0 MB/s | 117 kB 00:00 (4/154): libbrotli-1.0.9-11.fc38.x86_64.rpm 17 MB/s | 317 kB 00:00 (5/154): file-libs-5.44-3.fc39.x86_64.rpm 8.2 MB/s | 731 kB 00:00 (6/154): libcap-ng-0.8.3-5.fc38.x86_64.rpm 2.6 MB/s | 33 kB 00:00 (7/154): libfdisk-2.39.1-2.fc39.x86_64.rpm 16 MB/s | 163 kB 00:00 (8/154): libpwquality-1.4.5-4.fc39.x86_64.rpm 9.1 MB/s | 108 kB 00:00 (9/154): libmount-2.39.1-2.fc39.x86_64.rpm 10 MB/s | 155 kB 00:00 (10/154): libselinux-3.5-4.fc39.x86_64.rpm 9.0 MB/s | 87 kB 00:00 (11/154): libsemanage-3.5-2.fc39.x86_64.rpm 12 MB/s | 120 kB 00:00 (12/154): libsmartcols-2.39.1-2.fc39.x86_64.rpm 7.0 MB/s | 68 kB 00:00 (13/154): libuuid-2.39.1-2.fc39.x86_64.rpm 3.2 MB/s | 29 kB 00:00 (14/154): libxml2-2.10.4-1.fc39.x86_64.rpm 43 MB/s | 701 kB 00:00 (15/154): rpm-4.18.91-7.fc39.x86_64.rpm 27 MB/s | 503 kB 00:00 (16/154): rpm-build-4.18.91-7.fc39.x86_64.rpm 4.5 MB/s | 70 kB 00:00 (17/154): rpm-build-libs-4.18.91-7.fc39.x86_64. 10 MB/s | 96 kB 00:00 (18/154): rpm-libs-4.18.91-7.fc39.x86_64.rpm 26 MB/s | 309 kB 00:00 (19/154): rpmautospec-rpm-macros-0.3.5-2.fc39.n 802 kB/s | 9.5 kB 00:00 (20/154): rust-srpm-macros-24-2.fc39.noarch.rpm 1.3 MB/s | 13 kB 00:00 (21/154): util-linux-2.39.1-2.fc39.x86_64.rpm 49 MB/s | 1.1 MB 00:00 (22/154): util-linux-core-2.39.1-2.fc39.x86_64. 20 MB/s | 480 kB 00:00 (23/154): ansible-srpm-macros-1-10.fc39.noarch. 361 kB/s | 21 kB 00:00 (24/154): alternatives-1.24-1.fc39.x86_64.rpm 482 kB/s | 39 kB 00:00 (25/154): authselect-1.4.2-2.fc38.x86_64.rpm 1.4 MB/s | 144 kB 00:00 (26/154): basesystem-11-17.fc39.noarch.rpm 142 kB/s | 7.0 kB 00:00 (27/154): authselect-libs-1.4.2-2.fc38.x86_64.r 3.1 MB/s | 249 kB 00:00 (28/154): bash-5.2.15-3.fc38.x86_64.rpm 9.0 MB/s | 1.8 MB 00:00 (29/154): binutils-gold-2.40-9.fc39.x86_64.rpm 2.5 MB/s | 797 kB 00:00 (30/154): bzip2-1.0.8-13.fc38.x86_64.rpm 344 kB/s | 52 kB 00:00 (31/154): bzip2-libs-1.0.8-13.fc38.x86_64.rpm 1.2 MB/s | 41 kB 00:00 (32/154): binutils-2.40-9.fc39.x86_64.rpm 14 MB/s | 5.6 MB 00:00 (33/154): ca-certificates-2023.2.60-2.fc38.noar 7.1 MB/s | 845 kB 00:00 (34/154): coreutils-9.3-1.fc39.x86_64.rpm 5.1 MB/s | 1.1 MB 00:00 (35/154): coreutils-common-9.3-1.fc39.x86_64.rp 8.7 MB/s | 2.1 MB 00:00 (36/154): crypto-policies-20230614-1.git5f3458e 5.4 MB/s | 94 kB 00:00 (37/154): curl-8.1.2-1.fc39.x86_64.rpm 17 MB/s | 345 kB 00:00 (38/154): cpio-2.14-2.fc39.x86_64.rpm 992 kB/s | 279 kB 00:00 (39/154): cracklib-2.9.7-31.fc38.x86_64.rpm 596 kB/s | 92 kB 00:00 (40/154): debugedit-5.0-7.fc38.x86_64.rpm 4.1 MB/s | 78 kB 00:00 (41/154): cyrus-sasl-lib-2.1.28-10.fc39.x86_64. 4.2 MB/s | 792 kB 00:00 (42/154): ed-1.19-2.fc38.x86_64.rpm 4.5 MB/s | 78 kB 00:00 (43/154): diffutils-3.10-1.fc39.x86_64.rpm 2.5 MB/s | 399 kB 00:00 (44/154): dwz-0.15-2.fc38.x86_64.rpm 942 kB/s | 135 kB 00:00 (45/154): efi-srpm-macros-5-8.fc39.noarch.rpm 1.3 MB/s | 22 kB 00:00 (46/154): elfutils-default-yama-scope-0.189-2.f 934 kB/s | 15 kB 00:00 (47/154): elfutils-libelf-0.189-2.fc39.x86_64.r 9.0 MB/s | 196 kB 00:00 (48/154): elfutils-debuginfod-client-0.189-2.fc 100 kB/s | 39 kB 00:00 (49/154): elfutils-0.189-2.fc39.x86_64.rpm 1.3 MB/s | 536 kB 00:00 (50/154): elfutils-libs-0.189-2.fc39.x86_64.rpm 615 kB/s | 260 kB 00:00 (51/154): fedora-release-common-39-0.14.noarch. 626 kB/s | 17 kB 00:00 (52/154): fedora-release-identity-basic-39-0.14 201 kB/s | 7.4 kB 00:00 (53/154): fedora-release-39-0.14.noarch.rpm 37 kB/s | 6.6 kB 00:00 (54/154): fedora-gpg-keys-39-0.1.noarch.rpm 689 kB/s | 126 kB 00:00 (55/154): fedora-repos-39-0.1.noarch.rpm 209 kB/s | 9.4 kB 00:00 (56/154): findutils-4.9.0-4.fc39.x86_64.rpm 4.2 MB/s | 491 kB 00:00 (57/154): fedora-repos-rawhide-39-0.1.noarch.rp 54 kB/s | 9.0 kB 00:00 (58/154): fonts-srpm-macros-2.0.5-11.fc38.noarc 499 kB/s | 26 kB 00:00 (59/154): filesystem-3.18-4.fc39.x86_64.rpm 2.8 MB/s | 1.1 MB 00:00 (60/154): fpc-srpm-macros-1.3-7.fc38.noarch.rpm 35 kB/s | 7.8 kB 00:00 (61/154): gawk-5.2.2-1.fc39.x86_64.rpm 3.6 MB/s | 1.1 MB 00:00 (62/154): ghc-srpm-macros-1.6.1-1.fc38.noarch.r 300 kB/s | 8.0 kB 00:00 (63/154): gdbm-libs-1.23-3.fc38.x86_64.rpm 490 kB/s | 56 kB 00:00 (64/154): glibc-2.37.9000-14.fc39.x86_64.rpm 16 MB/s | 2.2 MB 00:00 (65/154): glibc-common-2.37.9000-14.fc39.x86_64 2.3 MB/s | 339 kB 00:00 (66/154): glibc-minimal-langpack-2.37.9000-14.f 853 kB/s | 59 kB 00:00 (67/154): gdb-minimal-13.2-1.fc39.x86_64.rpm 12 MB/s | 4.2 MB 00:00 (68/154): gmp-6.2.1-4.fc38.x86_64.rpm 6.3 MB/s | 313 kB 00:00 (69/154): gnat-srpm-macros-6-2.fc38.noarch.rpm 250 kB/s | 8.8 kB 00:00 (70/154): go-srpm-macros-3.2.0-3.fc39.noarch.rp 867 kB/s | 27 kB 00:00 (71/154): glibc-gconv-extra-2.37.9000-14.fc39.x 10 MB/s | 1.6 MB 00:00 (72/154): grep-3.11-1.fc39.x86_64.rpm 6.6 MB/s | 298 kB 00:00 (73/154): info-7.0.3-2.fc39.x86_64.rpm 5.8 MB/s | 182 kB 00:00 (74/154): gzip-1.12-3.fc38.x86_64.rpm 3.9 MB/s | 166 kB 00:00 (75/154): jansson-2.13.1-6.fc38.x86_64.rpm 1.2 MB/s | 44 kB 00:00 (76/154): kernel-srpm-macros-1.0-19.fc39.noarch 312 kB/s | 10 kB 00:00 (77/154): libacl-2.3.1-7.fc39.x86_64.rpm 589 kB/s | 23 kB 00:00 (78/154): keyutils-libs-1.6.1-6.fc38.x86_64.rpm 314 kB/s | 31 kB 00:00 (79/154): libattr-2.5.1-7.fc39.x86_64.rpm 478 kB/s | 18 kB 00:00 (80/154): libarchive-3.6.1-5.fc39.x86_64.rpm 4.8 MB/s | 400 kB 00:00 (81/154): krb5-libs-1.21-1.fc39.x86_64.rpm 5.6 MB/s | 765 kB 00:00 (82/154): libcap-2.48-6.fc38.x86_64.rpm 2.7 MB/s | 67 kB 00:00 (83/154): libcom_err-1.47.0-1.fc39.x86_64.rpm 1.1 MB/s | 26 kB 00:00 (84/154): libeconf-0.4.0-5.fc38.x86_64.rpm 1.0 MB/s | 27 kB 00:00 (85/154): libcurl-8.1.2-1.fc39.x86_64.rpm 6.9 MB/s | 323 kB 00:00 (86/154): libevent-2.1.12-8.fc38.x86_64.rpm 8.7 MB/s | 257 kB 00:00 (87/154): libgcc-13.1.1-4.fc39.x86_64.rpm 1.3 MB/s | 107 kB 00:00 (88/154): libgomp-13.1.1-4.fc39.x86_64.rpm 13 MB/s | 317 kB 00:00 (89/154): libffi-3.4.4-2.fc38.x86_64.rpm 289 kB/s | 38 kB 00:00 (90/154): libdb-5.3.28-55.fc38.x86_64.rpm 4.2 MB/s | 758 kB 00:00 (91/154): libidn2-2.3.4-2.fc38.x86_64.rpm 7.0 MB/s | 160 kB 00:00 (92/154): libnghttp2-1.54.0-1.fc39.x86_64.rpm 3.1 MB/s | 75 kB 00:00 (93/154): libnsl2-2.0.0-5.fc38.x86_64.rpm 1.5 MB/s | 30 kB 00:00 (94/154): libpkgconf-1.9.4-2.fc39.x86_64.rpm 2.1 MB/s | 38 kB 00:00 (95/154): libpsl-0.21.2-3.fc39.x86_64.rpm 3.2 MB/s | 63 kB 00:00 (96/154): libsepol-3.5-1.fc39.x86_64.rpm 11 MB/s | 324 kB 00:00 (97/154): libsigsegv-2.14-4.fc38.x86_64.rpm 1.3 MB/s | 27 kB 00:00 (98/154): libssh-config-0.10.5-1.fc39.noarch.rp 430 kB/s | 9.0 kB 00:00 (99/154): libssh-0.10.5-1.fc39.x86_64.rpm 6.3 MB/s | 211 kB 00:00 (100/154): libtasn1-4.19.0-2.fc38.x86_64.rpm 2.4 MB/s | 74 kB 00:00 (101/154): libtirpc-1.3.3-1.rc1.fc39.x86_64.rpm 2.9 MB/s | 93 kB 00:00 (102/154): libunistring-1.1-3.fc38.x86_64.rpm 9.0 MB/s | 545 kB 00:00 (103/154): libstdc++-13.1.1-4.fc39.x86_64.rpm 5.6 MB/s | 861 kB 00:00 (104/154): libutempter-1.2.1-9.fc39.x86_64.rpm 460 kB/s | 26 kB 00:00 (105/154): libunistring1.0-1.0-1.fc38.x86_64.rp 4.6 MB/s | 539 kB 00:00 (106/154): libverto-0.3.2-5.fc38.x86_64.rpm 968 kB/s | 21 kB 00:00 (107/154): libxcrypt-4.4.35-1.fc39.x86_64.rpm 6.1 MB/s | 119 kB 00:00 (108/154): lua-libs-5.4.4-9.fc39.x86_64.rpm 6.7 MB/s | 133 kB 00:00 (109/154): lua-srpm-macros-1-8.fc38.noarch.rpm 339 kB/s | 8.6 kB 00:00 (110/154): libzstd-1.5.5-1.fc39.x86_64.rpm 6.9 MB/s | 308 kB 00:00 (111/154): lz4-libs-1.9.4-3.fc39.x86_64.rpm 3.2 MB/s | 67 kB 00:00 (112/154): ncurses-libs-6.4-5.20230520.fc39.x86 14 MB/s | 336 kB 00:00 (113/154): ocaml-srpm-macros-7-3.fc38.noarch.rp 755 kB/s | 13 kB 00:00 (114/154): openblas-srpm-macros-2-13.fc38.noarc 451 kB/s | 7.5 kB 00:00 (115/154): mpfr-4.1.1-3.fc38.x86_64.rpm 8.2 MB/s | 600 kB 00:00 (116/154): ncurses-base-6.4-5.20230520.fc39.noa 1.2 MB/s | 88 kB 00:00 (117/154): openldap-2.6.4-2.fc39.x86_64.rpm 11 MB/s | 255 kB 00:00 (118/154): p11-kit-trust-0.24.1-6.fc38.x86_64.r 6.4 MB/s | 136 kB 00:00 (119/154): package-notes-srpm-macros-0.5-8.fc39 535 kB/s | 11 kB 00:00 (120/154): openssl-libs-3.0.8-2.fc39.x86_64.rpm 12 MB/s | 2.1 MB 00:00 (121/154): p11-kit-0.24.1-6.fc38.x86_64.rpm 1.9 MB/s | 359 kB 00:00 (122/154): pam-libs-1.5.3-1.fc39.x86_64.rpm 2.4 MB/s | 57 kB 00:00 (123/154): pam-1.5.3-1.fc39.x86_64.rpm 2.9 MB/s | 547 kB 00:00 (124/154): pcre2-syntax-10.42-1.fc38.1.noarch.r 7.1 MB/s | 144 kB 00:00 (125/154): perl-srpm-macros-1-48.fc38.noarch.rp 308 kB/s | 8.4 kB 00:00 (126/154): pkgconf-1.9.4-2.fc39.x86_64.rpm 1.9 MB/s | 42 kB 00:00 (127/154): pcre2-10.42-1.fc38.1.x86_64.rpm 2.0 MB/s | 234 kB 00:00 (128/154): patch-2.7.6-21.fc39.x86_64.rpm 923 kB/s | 126 kB 00:00 (129/154): pkgconf-m4-1.9.4-2.fc39.noarch.rpm 520 kB/s | 14 kB 00:00 (130/154): publicsuffix-list-dafsa-20230614-1.f 1.4 MB/s | 57 kB 00:00 (131/154): pyproject-srpm-macros-1.9.0-1.fc39.n 815 kB/s | 15 kB 00:00 (132/154): pkgconf-pkg-config-1.9.4-2.fc39.x86_ 121 kB/s | 9.5 kB 00:00 (133/154): popt-1.19-2.fc38.x86_64.rpm 856 kB/s | 67 kB 00:00 (134/154): python-srpm-macros-3.11-10.fc39.noar 1.5 MB/s | 26 kB 00:00 (135/154): readline-8.2-3.fc38.x86_64.rpm 9.6 MB/s | 212 kB 00:00 (136/154): qt5-srpm-macros-5.15.10-1.fc39.noarc 159 kB/s | 7.8 kB 00:00 (137/154): redhat-rpm-config-255-1.fc39.noarch. 4.6 MB/s | 83 kB 00:00 (138/154): qt6-srpm-macros-6.5.1-1.fc39.noarch. 195 kB/s | 9.2 kB 00:00 (139/154): sed-4.8-12.fc38.x86_64.rpm 11 MB/s | 306 kB 00:00 (140/154): rpm-sequoia-1.4.1-1.fc39.x86_64.rpm 8.0 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-------------------------------------------------------------------------------- Total 12 MB/s | 53 MB 00:04 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary (0x18B8E74C) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0xEB10B464: Userid : "Fedora (38) " Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-4.fc39.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.1.1-4.fc39.x86_64 1/154 Running scriptlet: libgcc-13.1.1-4.fc39.x86_64 1/154 Installing : crypto-policies-20230614-1.git5f3458e.fc39.noarc 2/154 Running scriptlet: crypto-policies-20230614-1.git5f3458e.fc39.noarc 2/154 Installing : tzdata-2023c-1.fc39.noarch 3/154 Installing : fedora-release-identity-basic-39-0.14.noarch 4/154 Installing : qt6-srpm-macros-6.5.1-1.fc39.noarch 5/154 Installing : qt5-srpm-macros-5.15.10-1.fc39.noarch 6/154 Installing : pyproject-srpm-macros-1.9.0-1.fc39.noarch 7/154 Installing : publicsuffix-list-dafsa-20230614-1.fc39.noarch 8/154 Installing : pkgconf-m4-1.9.4-2.fc39.noarch 9/154 Installing : perl-srpm-macros-1-48.fc38.noarch 10/154 Installing : pcre2-syntax-10.42-1.fc38.1.noarch 11/154 Installing : package-notes-srpm-macros-0.5-8.fc39.noarch 12/154 Installing : openblas-srpm-macros-2-13.fc38.noarch 13/154 Installing : 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12/154 Verifying : libuuid-2.39.1-2.fc39.x86_64 13/154 Verifying : libxml2-2.10.4-1.fc39.x86_64 14/154 Verifying : rpm-4.18.91-7.fc39.x86_64 15/154 Verifying : rpm-build-4.18.91-7.fc39.x86_64 16/154 Verifying : rpm-build-libs-4.18.91-7.fc39.x86_64 17/154 Verifying : rpm-libs-4.18.91-7.fc39.x86_64 18/154 Verifying : rpmautospec-rpm-macros-0.3.5-2.fc39.noarch 19/154 Verifying : rust-srpm-macros-24-2.fc39.noarch 20/154 Verifying : util-linux-2.39.1-2.fc39.x86_64 21/154 Verifying : util-linux-core-2.39.1-2.fc39.x86_64 22/154 Verifying : alternatives-1.24-1.fc39.x86_64 23/154 Verifying : ansible-srpm-macros-1-10.fc39.noarch 24/154 Verifying : authselect-1.4.2-2.fc38.x86_64 25/154 Verifying : authselect-libs-1.4.2-2.fc38.x86_64 26/154 Verifying : basesystem-11-17.fc39.noarch 27/154 Verifying : bash-5.2.15-3.fc38.x86_64 28/154 Verifying : binutils-2.40-9.fc39.x86_64 29/154 Verifying : binutils-gold-2.40-9.fc39.x86_64 30/154 Verifying : bzip2-1.0.8-13.fc38.x86_64 31/154 Verifying : bzip2-libs-1.0.8-13.fc38.x86_64 32/154 Verifying : ca-certificates-2023.2.60-2.fc38.noarch 33/154 Verifying : coreutils-9.3-1.fc39.x86_64 34/154 Verifying : coreutils-common-9.3-1.fc39.x86_64 35/154 Verifying : cpio-2.14-2.fc39.x86_64 36/154 Verifying : cracklib-2.9.7-31.fc38.x86_64 37/154 Verifying : crypto-policies-20230614-1.git5f3458e.fc39.noarc 38/154 Verifying : curl-8.1.2-1.fc39.x86_64 39/154 Verifying : cyrus-sasl-lib-2.1.28-10.fc39.x86_64 40/154 Verifying : debugedit-5.0-7.fc38.x86_64 41/154 Verifying : diffutils-3.10-1.fc39.x86_64 42/154 Verifying : dwz-0.15-2.fc38.x86_64 43/154 Verifying : ed-1.19-2.fc38.x86_64 44/154 Verifying : efi-srpm-macros-5-8.fc39.noarch 45/154 Verifying : elfutils-0.189-2.fc39.x86_64 46/154 Verifying : elfutils-debuginfod-client-0.189-2.fc39.x86_64 47/154 Verifying : elfutils-default-yama-scope-0.189-2.fc39.noarch 48/154 Verifying : elfutils-libelf-0.189-2.fc39.x86_64 49/154 Verifying : elfutils-libs-0.189-2.fc39.x86_64 50/154 Verifying : fedora-gpg-keys-39-0.1.noarch 51/154 Verifying : fedora-release-39-0.14.noarch 52/154 Verifying : fedora-release-common-39-0.14.noarch 53/154 Verifying : fedora-release-identity-basic-39-0.14.noarch 54/154 Verifying : fedora-repos-39-0.1.noarch 55/154 Verifying : fedora-repos-rawhide-39-0.1.noarch 56/154 Verifying : filesystem-3.18-4.fc39.x86_64 57/154 Verifying : findutils-1:4.9.0-4.fc39.x86_64 58/154 Verifying : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 59/154 Verifying : fpc-srpm-macros-1.3-7.fc38.noarch 60/154 Verifying : gawk-5.2.2-1.fc39.x86_64 61/154 Verifying : gdb-minimal-13.2-1.fc39.x86_64 62/154 Verifying : gdbm-libs-1:1.23-3.fc38.x86_64 63/154 Verifying : ghc-srpm-macros-1.6.1-1.fc38.noarch 64/154 Verifying : glibc-2.37.9000-14.fc39.x86_64 65/154 Verifying : glibc-common-2.37.9000-14.fc39.x86_64 66/154 Verifying : glibc-gconv-extra-2.37.9000-14.fc39.x86_64 67/154 Verifying : glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 68/154 Verifying : gmp-1:6.2.1-4.fc38.x86_64 69/154 Verifying : gnat-srpm-macros-6-2.fc38.noarch 70/154 Verifying : go-srpm-macros-3.2.0-3.fc39.noarch 71/154 Verifying : grep-3.11-1.fc39.x86_64 72/154 Verifying : gzip-1.12-3.fc38.x86_64 73/154 Verifying : info-7.0.3-2.fc39.x86_64 74/154 Verifying : jansson-2.13.1-6.fc38.x86_64 75/154 Verifying : kernel-srpm-macros-1.0-19.fc39.noarch 76/154 Verifying : keyutils-libs-1.6.1-6.fc38.x86_64 77/154 Verifying : krb5-libs-1.21-1.fc39.x86_64 78/154 Verifying : libacl-2.3.1-7.fc39.x86_64 79/154 Verifying : libarchive-3.6.1-5.fc39.x86_64 80/154 Verifying : libattr-2.5.1-7.fc39.x86_64 81/154 Verifying : libcap-2.48-6.fc38.x86_64 82/154 Verifying : libcom_err-1.47.0-1.fc39.x86_64 83/154 Verifying : libcurl-8.1.2-1.fc39.x86_64 84/154 Verifying : libdb-5.3.28-55.fc38.x86_64 85/154 Verifying : libeconf-0.4.0-5.fc38.x86_64 86/154 Verifying : libevent-2.1.12-8.fc38.x86_64 87/154 Verifying : libffi-3.4.4-2.fc38.x86_64 88/154 Verifying : libgcc-13.1.1-4.fc39.x86_64 89/154 Verifying : libgomp-13.1.1-4.fc39.x86_64 90/154 Verifying : libidn2-2.3.4-2.fc38.x86_64 91/154 Verifying : libnghttp2-1.54.0-1.fc39.x86_64 92/154 Verifying : libnsl2-2.0.0-5.fc38.x86_64 93/154 Verifying : libpkgconf-1.9.4-2.fc39.x86_64 94/154 Verifying : libpsl-0.21.2-3.fc39.x86_64 95/154 Verifying : libsepol-3.5-1.fc39.x86_64 96/154 Verifying : libsigsegv-2.14-4.fc38.x86_64 97/154 Verifying : libssh-0.10.5-1.fc39.x86_64 98/154 Verifying : libssh-config-0.10.5-1.fc39.noarch 99/154 Verifying : libstdc++-13.1.1-4.fc39.x86_64 100/154 Verifying : libtasn1-4.19.0-2.fc38.x86_64 101/154 Verifying : libtirpc-1.3.3-1.rc1.fc39.x86_64 102/154 Verifying : libunistring-1.1-3.fc38.x86_64 103/154 Verifying : libunistring1.0-1.0-1.fc38.x86_64 104/154 Verifying : libutempter-1.2.1-9.fc39.x86_64 105/154 Verifying : libverto-0.3.2-5.fc38.x86_64 106/154 Verifying : libxcrypt-4.4.35-1.fc39.x86_64 107/154 Verifying : libzstd-1.5.5-1.fc39.x86_64 108/154 Verifying : lua-libs-5.4.4-9.fc39.x86_64 109/154 Verifying : lua-srpm-macros-1-8.fc38.noarch 110/154 Verifying : lz4-libs-1.9.4-3.fc39.x86_64 111/154 Verifying : mpfr-4.1.1-3.fc38.x86_64 112/154 Verifying : ncurses-base-6.4-5.20230520.fc39.noarch 113/154 Verifying : ncurses-libs-6.4-5.20230520.fc39.x86_64 114/154 Verifying : ocaml-srpm-macros-7-3.fc38.noarch 115/154 Verifying : openblas-srpm-macros-2-13.fc38.noarch 116/154 Verifying : openldap-2.6.4-2.fc39.x86_64 117/154 Verifying : openssl-libs-1:3.0.8-2.fc39.x86_64 118/154 Verifying : p11-kit-0.24.1-6.fc38.x86_64 119/154 Verifying : p11-kit-trust-0.24.1-6.fc38.x86_64 120/154 Verifying : package-notes-srpm-macros-0.5-8.fc39.noarch 121/154 Verifying : pam-1.5.3-1.fc39.x86_64 122/154 Verifying : pam-libs-1.5.3-1.fc39.x86_64 123/154 Verifying : patch-2.7.6-21.fc39.x86_64 124/154 Verifying : pcre2-10.42-1.fc38.1.x86_64 125/154 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 126/154 Verifying : perl-srpm-macros-1-48.fc38.noarch 127/154 Verifying : pkgconf-1.9.4-2.fc39.x86_64 128/154 Verifying : pkgconf-m4-1.9.4-2.fc39.noarch 129/154 Verifying : pkgconf-pkg-config-1.9.4-2.fc39.x86_64 130/154 Verifying : popt-1.19-2.fc38.x86_64 131/154 Verifying : publicsuffix-list-dafsa-20230614-1.fc39.noarch 132/154 Verifying : pyproject-srpm-macros-1.9.0-1.fc39.noarch 133/154 Verifying : python-srpm-macros-3.11-10.fc39.noarch 134/154 Verifying : qt5-srpm-macros-5.15.10-1.fc39.noarch 135/154 Verifying : qt6-srpm-macros-6.5.1-1.fc39.noarch 136/154 Verifying : readline-8.2-3.fc38.x86_64 137/154 Verifying : redhat-rpm-config-255-1.fc39.noarch 138/154 Verifying : rpm-sequoia-1.4.1-1.fc39.x86_64 139/154 Verifying : sed-4.8-12.fc38.x86_64 140/154 Verifying : setup-2.14.3-3.fc39.noarch 141/154 Verifying : shadow-utils-2:4.13-7.fc39.x86_64 142/154 Verifying : sqlite-libs-3.41.2-3.fc39.x86_64 143/154 Verifying : systemd-libs-253.5-6.fc39.x86_64 144/154 Verifying : tar-2:1.34-8.fc39.x86_64 145/154 Verifying : tzdata-2023c-1.fc39.noarch 146/154 Verifying : unzip-6.0-60.fc38.x86_64 147/154 Verifying : which-2.21-39.fc39.x86_64 148/154 Verifying : xxhash-libs-0.8.1-5.fc39.x86_64 149/154 Verifying : xz-5.4.3-1.fc39.x86_64 150/154 Verifying : xz-libs-5.4.3-1.fc39.x86_64 151/154 Verifying : zip-3.0-36.fc38.x86_64 152/154 Verifying : zlib-1.2.13-3.fc38.x86_64 153/154 Verifying : zstd-1.5.5-1.fc39.x86_64 154/154 Installed: alternatives-1.24-1.fc39.x86_64 ansible-srpm-macros-1-10.fc39.noarch audit-libs-3.1.1-2.fc39.x86_64 authselect-1.4.2-2.fc38.x86_64 authselect-libs-1.4.2-2.fc38.x86_64 basesystem-11-17.fc39.noarch bash-5.2.15-3.fc38.x86_64 binutils-2.40-9.fc39.x86_64 binutils-gold-2.40-9.fc39.x86_64 bzip2-1.0.8-13.fc38.x86_64 bzip2-libs-1.0.8-13.fc38.x86_64 ca-certificates-2023.2.60-2.fc38.noarch coreutils-9.3-1.fc39.x86_64 coreutils-common-9.3-1.fc39.x86_64 cpio-2.14-2.fc39.x86_64 cracklib-2.9.7-31.fc38.x86_64 crypto-policies-20230614-1.git5f3458e.fc39.noarch curl-8.1.2-1.fc39.x86_64 cyrus-sasl-lib-2.1.28-10.fc39.x86_64 debugedit-5.0-7.fc38.x86_64 diffutils-3.10-1.fc39.x86_64 dwz-0.15-2.fc38.x86_64 ed-1.19-2.fc38.x86_64 efi-srpm-macros-5-8.fc39.noarch elfutils-0.189-2.fc39.x86_64 elfutils-debuginfod-client-0.189-2.fc39.x86_64 elfutils-default-yama-scope-0.189-2.fc39.noarch elfutils-libelf-0.189-2.fc39.x86_64 elfutils-libs-0.189-2.fc39.x86_64 fedora-gpg-keys-39-0.1.noarch fedora-release-39-0.14.noarch fedora-release-common-39-0.14.noarch fedora-release-identity-basic-39-0.14.noarch fedora-repos-39-0.1.noarch fedora-repos-rawhide-39-0.1.noarch file-5.44-3.fc39.x86_64 file-libs-5.44-3.fc39.x86_64 filesystem-3.18-4.fc39.x86_64 findutils-1:4.9.0-4.fc39.x86_64 fonts-srpm-macros-1:2.0.5-11.fc38.noarch fpc-srpm-macros-1.3-7.fc38.noarch gawk-5.2.2-1.fc39.x86_64 gdb-minimal-13.2-1.fc39.x86_64 gdbm-libs-1:1.23-3.fc38.x86_64 ghc-srpm-macros-1.6.1-1.fc38.noarch glibc-2.37.9000-14.fc39.x86_64 glibc-common-2.37.9000-14.fc39.x86_64 glibc-gconv-extra-2.37.9000-14.fc39.x86_64 glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 gmp-1:6.2.1-4.fc38.x86_64 gnat-srpm-macros-6-2.fc38.noarch go-srpm-macros-3.2.0-3.fc39.noarch grep-3.11-1.fc39.x86_64 gzip-1.12-3.fc38.x86_64 info-7.0.3-2.fc39.x86_64 jansson-2.13.1-6.fc38.x86_64 kernel-srpm-macros-1.0-19.fc39.noarch keyutils-libs-1.6.1-6.fc38.x86_64 krb5-libs-1.21-1.fc39.x86_64 libacl-2.3.1-7.fc39.x86_64 libarchive-3.6.1-5.fc39.x86_64 libattr-2.5.1-7.fc39.x86_64 libblkid-2.39.1-2.fc39.x86_64 libbrotli-1.0.9-11.fc38.x86_64 libcap-2.48-6.fc38.x86_64 libcap-ng-0.8.3-5.fc38.x86_64 libcom_err-1.47.0-1.fc39.x86_64 libcurl-8.1.2-1.fc39.x86_64 libdb-5.3.28-55.fc38.x86_64 libeconf-0.4.0-5.fc38.x86_64 libevent-2.1.12-8.fc38.x86_64 libfdisk-2.39.1-2.fc39.x86_64 libffi-3.4.4-2.fc38.x86_64 libgcc-13.1.1-4.fc39.x86_64 libgomp-13.1.1-4.fc39.x86_64 libidn2-2.3.4-2.fc38.x86_64 libmount-2.39.1-2.fc39.x86_64 libnghttp2-1.54.0-1.fc39.x86_64 libnsl2-2.0.0-5.fc38.x86_64 libpkgconf-1.9.4-2.fc39.x86_64 libpsl-0.21.2-3.fc39.x86_64 libpwquality-1.4.5-4.fc39.x86_64 libselinux-3.5-4.fc39.x86_64 libsemanage-3.5-2.fc39.x86_64 libsepol-3.5-1.fc39.x86_64 libsigsegv-2.14-4.fc38.x86_64 libsmartcols-2.39.1-2.fc39.x86_64 libssh-0.10.5-1.fc39.x86_64 libssh-config-0.10.5-1.fc39.noarch libstdc++-13.1.1-4.fc39.x86_64 libtasn1-4.19.0-2.fc38.x86_64 libtirpc-1.3.3-1.rc1.fc39.x86_64 libunistring-1.1-3.fc38.x86_64 libunistring1.0-1.0-1.fc38.x86_64 libutempter-1.2.1-9.fc39.x86_64 libuuid-2.39.1-2.fc39.x86_64 libverto-0.3.2-5.fc38.x86_64 libxcrypt-4.4.35-1.fc39.x86_64 libxml2-2.10.4-1.fc39.x86_64 libzstd-1.5.5-1.fc39.x86_64 lua-libs-5.4.4-9.fc39.x86_64 lua-srpm-macros-1-8.fc38.noarch lz4-libs-1.9.4-3.fc39.x86_64 mpfr-4.1.1-3.fc38.x86_64 ncurses-base-6.4-5.20230520.fc39.noarch ncurses-libs-6.4-5.20230520.fc39.x86_64 ocaml-srpm-macros-7-3.fc38.noarch openblas-srpm-macros-2-13.fc38.noarch openldap-2.6.4-2.fc39.x86_64 openssl-libs-1:3.0.8-2.fc39.x86_64 p11-kit-0.24.1-6.fc38.x86_64 p11-kit-trust-0.24.1-6.fc38.x86_64 package-notes-srpm-macros-0.5-8.fc39.noarch pam-1.5.3-1.fc39.x86_64 pam-libs-1.5.3-1.fc39.x86_64 patch-2.7.6-21.fc39.x86_64 pcre2-10.42-1.fc38.1.x86_64 pcre2-syntax-10.42-1.fc38.1.noarch perl-srpm-macros-1-48.fc38.noarch pkgconf-1.9.4-2.fc39.x86_64 pkgconf-m4-1.9.4-2.fc39.noarch pkgconf-pkg-config-1.9.4-2.fc39.x86_64 popt-1.19-2.fc38.x86_64 publicsuffix-list-dafsa-20230614-1.fc39.noarch pyproject-srpm-macros-1.9.0-1.fc39.noarch python-srpm-macros-3.11-10.fc39.noarch qt5-srpm-macros-5.15.10-1.fc39.noarch qt6-srpm-macros-6.5.1-1.fc39.noarch readline-8.2-3.fc38.x86_64 redhat-rpm-config-255-1.fc39.noarch rpm-4.18.91-7.fc39.x86_64 rpm-build-4.18.91-7.fc39.x86_64 rpm-build-libs-4.18.91-7.fc39.x86_64 rpm-libs-4.18.91-7.fc39.x86_64 rpm-sequoia-1.4.1-1.fc39.x86_64 rpmautospec-rpm-macros-0.3.5-2.fc39.noarch rust-srpm-macros-24-2.fc39.noarch sed-4.8-12.fc38.x86_64 setup-2.14.3-3.fc39.noarch shadow-utils-2:4.13-7.fc39.x86_64 sqlite-libs-3.41.2-3.fc39.x86_64 systemd-libs-253.5-6.fc39.x86_64 tar-2:1.34-8.fc39.x86_64 tzdata-2023c-1.fc39.noarch unzip-6.0-60.fc38.x86_64 util-linux-2.39.1-2.fc39.x86_64 util-linux-core-2.39.1-2.fc39.x86_64 which-2.21-39.fc39.x86_64 xxhash-libs-0.8.1-5.fc39.x86_64 xz-5.4.3-1.fc39.x86_64 xz-libs-5.4.3-1.fc39.x86_64 zip-3.0-36.fc38.x86_64 zlib-1.2.13-3.fc38.x86_64 zstd-1.5.5-1.fc39.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: which-2.21-39.fc39.x86_64 gawk-5.2.2-1.fc39.x86_64 libevent-2.1.12-8.fc38.x86_64 libcap-2.48-6.fc38.x86_64 gzip-1.12-3.fc38.x86_64 mpfr-4.1.1-3.fc38.x86_64 fedora-gpg-keys-39-0.1.noarch keyutils-libs-1.6.1-6.fc38.x86_64 libnghttp2-1.54.0-1.fc39.x86_64 glibc-common-2.37.9000-14.fc39.x86_64 zlib-1.2.13-3.fc38.x86_64 tzdata-2023c-1.fc39.noarch libfdisk-2.39.1-2.fc39.x86_64 libcap-ng-0.8.3-5.fc38.x86_64 gdbm-libs-1.23-3.fc38.x86_64 package-notes-srpm-macros-0.5-8.fc39.noarch patch-2.7.6-21.fc39.x86_64 lz4-libs-1.9.4-3.fc39.x86_64 libidn2-2.3.4-2.fc38.x86_64 ansible-srpm-macros-1-10.fc39.noarch glibc-gconv-extra-2.37.9000-14.fc39.x86_64 dwz-0.15-2.fc38.x86_64 pam-1.5.3-1.fc39.x86_64 curl-8.1.2-1.fc39.x86_64 lua-libs-5.4.4-9.fc39.x86_64 elfutils-default-yama-scope-0.189-2.fc39.noarch gpg-pubkey-eb10b464-6202d9c6 libattr-2.5.1-7.fc39.x86_64 ocaml-srpm-macros-7-3.fc38.noarch binutils-2.40-9.fc39.x86_64 python-srpm-macros-3.11-10.fc39.noarch systemd-libs-253.5-6.fc39.x86_64 libbrotli-1.0.9-11.fc38.x86_64 libeconf-0.4.0-5.fc38.x86_64 libacl-2.3.1-7.fc39.x86_64 perl-srpm-macros-1-48.fc38.noarch sqlite-libs-3.41.2-3.fc39.x86_64 cyrus-sasl-lib-2.1.28-10.fc39.x86_64 crypto-policies-20230614-1.git5f3458e.fc39.noarch efi-srpm-macros-5-8.fc39.noarch rust-srpm-macros-24-2.fc39.noarch bzip2-libs-1.0.8-13.fc38.x86_64 libblkid-2.39.1-2.fc39.x86_64 libpsl-0.21.2-3.fc39.x86_64 bzip2-1.0.8-13.fc38.x86_64 p11-kit-trust-0.24.1-6.fc38.x86_64 popt-1.19-2.fc38.x86_64 coreutils-9.3-1.fc39.x86_64 ca-certificates-2023.2.60-2.fc38.noarch libmount-2.39.1-2.fc39.x86_64 libtasn1-4.19.0-2.fc38.x86_64 fedora-repos-39-0.1.noarch pkgconf-pkg-config-1.9.4-2.fc39.x86_64 lua-srpm-macros-1-8.fc38.noarch cpio-2.14-2.fc39.x86_64 pyproject-srpm-macros-1.9.0-1.fc39.noarch pcre2-syntax-10.42-1.fc38.1.noarch libselinux-3.5-4.fc39.x86_64 krb5-libs-1.21-1.fc39.x86_64 file-5.44-3.fc39.x86_64 grep-3.11-1.fc39.x86_64 sed-4.8-12.fc38.x86_64 rpm-build-libs-4.18.91-7.fc39.x86_64 util-linux-2.39.1-2.fc39.x86_64 alternatives-1.24-1.fc39.x86_64 libxcrypt-4.4.35-1.fc39.x86_64 fedora-release-common-39-0.14.noarch basesystem-11-17.fc39.noarch jansson-2.13.1-6.fc38.x86_64 kernel-srpm-macros-1.0-19.fc39.noarch setup-2.14.3-3.fc39.noarch libffi-3.4.4-2.fc38.x86_64 ncurses-base-6.4-5.20230520.fc39.noarch rpm-sequoia-1.4.1-1.fc39.x86_64 qt6-srpm-macros-6.5.1-1.fc39.noarch publicsuffix-list-dafsa-20230614-1.fc39.noarch xxhash-libs-0.8.1-5.fc39.x86_64 rpmautospec-rpm-macros-0.3.5-2.fc39.noarch libsmartcols-2.39.1-2.fc39.x86_64 info-7.0.3-2.fc39.x86_64 pcre2-10.42-1.fc38.1.x86_64 fedora-release-39-0.14.noarch zstd-1.5.5-1.fc39.x86_64 libdb-5.3.28-55.fc38.x86_64 libssh-config-0.10.5-1.fc39.noarch libuuid-2.39.1-2.fc39.x86_64 gdb-minimal-13.2-1.fc39.x86_64 fonts-srpm-macros-2.0.5-11.fc38.noarch glibc-minimal-langpack-2.37.9000-14.fc39.x86_64 ncurses-libs-6.4-5.20230520.fc39.x86_64 elfutils-libs-0.189-2.fc39.x86_64 binutils-gold-2.40-9.fc39.x86_64 openblas-srpm-macros-2-13.fc38.noarch util-linux-core-2.39.1-2.fc39.x86_64 shadow-utils-4.13-7.fc39.x86_64 debugedit-5.0-7.fc38.x86_64 fpc-srpm-macros-1.3-7.fc38.noarch redhat-rpm-config-255-1.fc39.noarch coreutils-common-9.3-1.fc39.x86_64 xz-5.4.3-1.fc39.x86_64 libverto-0.3.2-5.fc38.x86_64 authselect-libs-1.4.2-2.fc38.x86_64 fedora-release-identity-basic-39-0.14.noarch tar-1.34-8.fc39.x86_64 libssh-0.10.5-1.fc39.x86_64 libarchive-3.6.1-5.fc39.x86_64 libsemanage-3.5-2.fc39.x86_64 libxml2-2.10.4-1.fc39.x86_64 fedora-repos-rawhide-39-0.1.noarch libsepol-3.5-1.fc39.x86_64 libutempter-1.2.1-9.fc39.x86_64 libunistring-1.1-3.fc38.x86_64 qt5-srpm-macros-5.15.10-1.fc39.noarch gpg-pubkey-18b8e74c-62f2920f authselect-1.4.2-2.fc38.x86_64 elfutils-debuginfod-client-0.189-2.fc39.x86_64 cracklib-2.9.7-31.fc38.x86_64 xz-libs-5.4.3-1.fc39.x86_64 rpm-4.18.91-7.fc39.x86_64 gnat-srpm-macros-6-2.fc38.noarch openldap-2.6.4-2.fc39.x86_64 elfutils-libelf-0.189-2.fc39.x86_64 unzip-6.0-60.fc38.x86_64 file-libs-5.44-3.fc39.x86_64 go-srpm-macros-3.2.0-3.fc39.noarch findutils-4.9.0-4.fc39.x86_64 pam-libs-1.5.3-1.fc39.x86_64 elfutils-0.189-2.fc39.x86_64 libzstd-1.5.5-1.fc39.x86_64 glibc-2.37.9000-14.fc39.x86_64 openssl-libs-3.0.8-2.fc39.x86_64 ed-1.19-2.fc38.x86_64 libsigsegv-2.14-4.fc38.x86_64 libpwquality-1.4.5-4.fc39.x86_64 libunistring1.0-1.0-1.fc38.x86_64 gmp-6.2.1-4.fc38.x86_64 audit-libs-3.1.1-2.fc39.x86_64 zip-3.0-36.fc38.x86_64 libnsl2-2.0.0-5.fc38.x86_64 pkgconf-1.9.4-2.fc39.x86_64 diffutils-3.10-1.fc39.x86_64 libgomp-13.1.1-4.fc39.x86_64 rpm-build-4.18.91-7.fc39.x86_64 libcurl-8.1.2-1.fc39.x86_64 rpm-libs-4.18.91-7.fc39.x86_64 libpkgconf-1.9.4-2.fc39.x86_64 bash-5.2.15-3.fc38.x86_64 pkgconf-m4-1.9.4-2.fc39.noarch libtirpc-1.3.3-1.rc1.fc39.x86_64 libgcc-13.1.1-4.fc39.x86_64 ghc-srpm-macros-1.6.1-1.fc38.noarch filesystem-3.18-4.fc39.x86_64 libcom_err-1.47.0-1.fc39.x86_64 p11-kit-0.24.1-6.fc38.x86_64 libstdc++-13.1.1-4.fc39.x86_64 readline-8.2-3.fc38.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1688169600 Wrote: /builddir/build/SRPMS/ProDy-2.4.0-3.fc39.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1688204662.982875/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1688204662.982875/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1688204662.982875/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-aloc45bo/ProDy/ProDy.spec) Config(child) 1 minutes 38 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/ProDy-2.4.0-3.fc39.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1688204662.982875 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/ProDy-2.4.0-3.fc39.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1688204662.982875/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1688204662.982875/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1688204662.982875/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (direct choice) Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 36 kB/s | 2.2 kB 00:00 fedora 454 kB/s | 23 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for ProDy-2.4.0-3.fc39.src.rpm Start: build setup for ProDy-2.4.0-3.fc39.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1688169600 Wrote: /builddir/build/SRPMS/ProDy-2.4.0-3.fc39.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 48 kB/s | 2.2 kB 00:00 fedora 574 kB/s | 23 kB 00:00 Dependencies resolved. =========================================================================================== Package Arch Version Repo Size =========================================================================================== Installing: gcc x86_64 13.1.1-4.fc39 fedora 34 M gcc-c++ x86_64 13.1.1-4.fc39 fedora 13 M python3-biopython x86_64 1.81-1.fc39 fedora 3.6 M python3-devel x86_64 3.11.4-1.fc39 fedora 269 k python3-matplotlib x86_64 3.7.1-5.fc39 copr_base 4.1 M python3-nose noarch 1.3.7-40.fc38 copr_base 327 k python3-numpy x86_64 1:1.24.3-1.fc39 copr_base 7.6 M python3-scipy x86_64 1.10.1-3.fc39 copr_base 21 M python3-setuptools noarch 67.7.2-2.fc39 copr_base 1.4 M python3-urllib3 noarch 1.26.15-1.fc39 copr_base 234 k Installing dependencies: adobe-mappings-cmap noarch 20230118-1.fc38 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20230118-1.fc38 fedora 113 k adobe-mappings-pdf noarch 20190401-3.fc38 fedora 698 k annobin-docs noarch 12.12-1.fc39 fedora 95 k annobin-plugin-gcc x86_64 12.12-1.fc39 fedora 894 k avahi-libs x86_64 0.8-23.fc39 fedora 67 k cairo x86_64 1.17.8-4.fc39 fedora 706 k cairo-gobject x86_64 1.17.8-4.fc39 fedora 18 k cpp x86_64 13.1.1-4.fc39 fedora 11 M crypto-policies-scripts noarch 20230614-1.git5f3458e.fc39 fedora 116 k cups-libs x86_64 1:2.4.6-1.fc39 fedora 266 k dbus-libs x86_64 1:1.14.8-1.fc39 fedora 156 k dejavu-sans-fonts noarch 2.37-20.fc38 fedora 1.3 M expat x86_64 2.5.0-2.fc38 fedora 110 k flex x86_64 2.6.4-12.fc38 fedora 313 k flexiblas x86_64 3.3.1-3.fc39 fedora 33 k flexiblas-netlib x86_64 3.3.1-3.fc39 fedora 3.1 M flexiblas-openblas-openmp x86_64 3.3.1-3.fc39 fedora 17 k fontconfig x86_64 2.14.2-3.fc39 fedora 296 k fonts-filesystem noarch 1:2.0.5-11.fc38 fedora 8.1 k freetype x86_64 2.13.1-1.fc39 fedora 414 k fribidi x86_64 1.0.13-1.fc39 fedora 90 k gc x86_64 8.2.2-3.fc38 fedora 110 k gcc-plugin-annobin x86_64 13.1.1-4.fc39 fedora 45 k gd x86_64 2.3.3-11.fc39 fedora 139 k gdk-pixbuf2 x86_64 2.42.10-2.fc38 fedora 485 k glib2 x86_64 2.76.3-1.fc39 fedora 2.8 M glibc-devel x86_64 2.37.9000-14.fc39 fedora 74 k glibc-headers-x86 noarch 2.37.9000-14.fc39 fedora 556 k gnutls x86_64 3.8.0-6.fc39 fedora 1.1 M google-droid-sans-fonts noarch 20200215-15.fc39 fedora 2.7 M google-noto-fonts-common noarch 20230601-3.fc39 fedora 16 k google-noto-sans-vf-fonts noarch 20230601-3.fc39 fedora 582 k graphite2 x86_64 1.3.14-11.fc38 fedora 95 k graphviz x86_64 8.0.5-2.fc39 copr_base 4.9 M gts x86_64 0.7.6-45.20121130.fc39 fedora 239 k guile22 x86_64 2.2.7-8.fc39 fedora 6.5 M harfbuzz x86_64 7.3.0-1.fc39 fedora 912 k highway x86_64 1.0.4-1.fc39 fedora 399 k jbig2dec-libs x86_64 0.19-8.fc38 fedora 73 k jbigkit-libs x86_64 2.1-25.fc38 fedora 53 k kernel-headers x86_64 6.4.0-1.fc39 fedora 1.5 M langpacks-core-font-en noarch 3.0-35.fc39 fedora 9.9 k lasi x86_64 1.1.3-10.fc38 fedora 53 k lcms2 x86_64 2.15-1.fc39 fedora 177 k libICE x86_64 1.0.10-10.fc38 fedora 71 k libSM x86_64 1.2.3-12.fc38 fedora 41 k libX11 x86_64 1.8.6-1.fc39 fedora 649 k libX11-common noarch 1.8.6-1.fc39 fedora 175 k libXau x86_64 1.0.11-2.fc38 fedora 32 k libXext x86_64 1.3.5-2.fc38 fedora 39 k libXft x86_64 2.3.8-2.fc39 fedora 72 k libXpm x86_64 3.5.15-3.fc38 fedora 63 k libXrender x86_64 0.9.11-2.fc38 fedora 27 k libXt x86_64 1.2.1-4.fc38 fedora 179 k libaom x86_64 3.6.1-1.fc39 fedora 1.8 M libavif x86_64 0.11.1-9.fc39 fedora 84 k libb2 x86_64 0.98.1-8.fc38 fedora 25 k libdatrie x86_64 0.2.13-6.fc39 fedora 32 k libdav1d x86_64 1.2.1-1.fc39 fedora 618 k libfontenc x86_64 1.1.6-2.fc38 fedora 32 k libgfortran x86_64 13.1.1-4.fc39 fedora 896 k libgs x86_64 10.01.0-3.fc39 fedora 3.5 M libijs x86_64 0.35-17.fc38 fedora 29 k libimagequant x86_64 4.0.1-4.fc39 fedora 302 k libjpeg-turbo x86_64 2.1.4-2.fc38 fedora 183 k libjxl x86_64 1:0.8.2-1.fc39 fedora 1.2 M libmpc x86_64 1.3.1-2.fc38 fedora 70 k libpaper x86_64 1:2.1.0-1.fc39 fedora 26 k libpng x86_64 2:1.6.37-14.fc38 fedora 120 k libpq x86_64 15.0-3.fc38 fedora 213 k libqhull_r x86_64 1:7.2.1-12.fc38 fedora 167 k libquadmath x86_64 13.1.1-4.fc39 fedora 192 k libraqm x86_64 0.8.0-4.fc38 fedora 20 k librsvg2 x86_64 2.56.1-1.fc39 fedora 1.5 M libstdc++-devel x86_64 13.1.1-4.fc39 fedora 2.6 M libthai x86_64 0.1.29-5.fc39 fedora 213 k libtiff x86_64 4.4.0-5.fc38 fedora 197 k libtool-ltdl x86_64 2.4.7-6.fc38 fedora 37 k libvmaf x86_64 2.3.0-5.fc38 fedora 180 k libwebp x86_64 1.3.0-2.fc38 fedora 282 k libxcb x86_64 1.13.1-11.fc38 fedora 231 k libxcrypt-devel x86_64 4.4.35-1.fc39 fedora 30 k libxslt x86_64 1.1.38-1.fc39 fedora 186 k m4 x86_64 1.4.19-4.fc37 fedora 303 k make x86_64 1:4.4.1-1.fc39 fedora 589 k mariadb-connector-c x86_64 3.3.5-1.fc39 fedora 208 k mariadb-connector-c-config noarch 3.3.5-1.fc39 fedora 8.6 k mkfontscale x86_64 1.2.2-3.fc38 fedora 32 k mpdecimal x86_64 2.5.1-6.fc38 fedora 89 k mysql-connector-python3 noarch 8.0.21-8.fc38 copr_base 553 k netpbm x86_64 11.02.00-1.fc39 fedora 185 k nettle x86_64 3.9.1-1.fc39 fedora 425 k nspr x86_64 4.35.0-8.fc39 fedora 137 k nss x86_64 3.90.0-2.fc39 fedora 695 k nss-softokn x86_64 3.90.0-2.fc39 fedora 1.0 M nss-softokn-freebl x86_64 3.90.0-2.fc39 fedora 322 k nss-sysinit x86_64 3.90.0-2.fc39 fedora 18 k nss-util x86_64 3.90.0-2.fc39 fedora 86 k openblas x86_64 0.3.21-4.fc38 fedora 35 k openblas-openmp x86_64 0.3.21-4.fc38 fedora 5.1 M openjpeg2 x86_64 2.5.0-3.fc38 fedora 178 k pango x86_64 1.50.14-1.fc39 fedora 342 k pixman x86_64 0.42.2-1.fc39 fedora 284 k poppler x86_64 23.02.0-2.fc39 fedora 1.2 M poppler-data noarch 0.4.11-4.fc38 fedora 2.0 M poppler-glib x86_64 23.02.0-2.fc39 fedora 176 k protobuf x86_64 3.19.6-4.fc39 copr_base 1.0 M pyproject-rpm-macros noarch 1.9.0-1.fc39 fedora 42 k python-pip-wheel noarch 23.1.2-1.fc39 copr_base 1.4 M python-rpm-macros noarch 3.11-10.fc39 fedora 20 k python-setuptools-wheel noarch 67.7.2-2.fc39 copr_base 662 k python3 x86_64 3.11.4-1.fc39 fedora 28 k python3-appdirs noarch 1.4.4-8.fc38 copr_base 24 k python3-brotli x86_64 1.0.9-11.fc38 copr_base 320 k python3-cairo x86_64 1.23.0-2.fc38 copr_base 126 k python3-contourpy x86_64 1.0.7-2.fc38 fedora 237 k python3-cycler noarch 0.11.0-7.fc38 fedora 21 k python3-dateutil noarch 1:2.8.2-6.fc39 copr_base 349 k python3-fonttools x86_64 4.40.0-2.fc39 copr_base 2.7 M python3-fs noarch 2.4.16-2.fc39 copr_base 282 k python3-idna noarch 3.4-2.fc38 copr_base 105 k python3-isodate noarch 0.6.1-7.fc39 copr_base 69 k python3-kiwisolver x86_64 1.4.4-7.fc38 fedora 66 k python3-libs x86_64 3.11.4-1.fc39 fedora 9.6 M python3-lxml x86_64 4.9.2-5.fc39 fedora 1.3 M python3-matplotlib-data noarch 3.7.1-5.fc39 copr_base 526 k python3-matplotlib-data-fonts noarch 3.7.1-5.fc39 copr_base 2.3 M python3-matplotlib-tk x86_64 3.7.1-5.fc39 copr_base 53 k python3-munkres noarch 1.1.2-14.fc38 copr_base 26 k python3-mysqlclient x86_64 2.1.1-3.fc38 copr_base 98 k python3-networkx noarch 3.1-1.fc39 fedora 3.6 M python3-numpy-f2py x86_64 1:1.24.3-1.fc39 copr_base 462 k python3-olefile noarch 0.46-19.fc38 copr_base 68 k python3-packaging noarch 23.1-1.fc39 copr_base 108 k python3-pillow x86_64 9.5.0-1.fc39 copr_base 884 k python3-pillow-tk x86_64 9.5.0-1.fc39 copr_base 31 k python3-protobuf x86_64 3.19.6-4.fc39 copr_base 398 k python3-psycopg2 x86_64 2.9.6-1.fc39 copr_base 202 k python3-pygraphviz x86_64 1.11-1.fc39 copr_base 146 k python3-pyparsing noarch 3.0.9-7.fc39 copr_base 255 k python3-pysocks noarch 1.7.1-17.fc39 copr_base 40 k python3-rdflib noarch 6.2.0-2.fc38 copr_base 906 k python3-reportlab noarch 4.0.4-1.fc39 fedora 3.4 M python3-rpm-generators noarch 14-6.fc39 fedora 30 k python3-rpm-macros noarch 3.11-10.fc39 fedora 15 k python3-six noarch 1.16.0-9.fc38 copr_base 43 k python3-tkinter x86_64 3.11.4-1.fc39 fedora 417 k python3-urllib3+socks noarch 1.26.15-1.fc39 copr_base 11 k rav1e-libs x86_64 0.6.6-1.fc39 fedora 1.0 M shared-mime-info x86_64 2.2-3.fc38 fedora 381 k svt-av1-libs x86_64 1.4.1-2.fc38 fedora 2.0 M tcl x86_64 1:8.6.12-4.fc39 fedora 1.1 M tk x86_64 1:8.6.12-4.fc38 fedora 1.6 M urw-base35-bookman-fonts noarch 20200910-16.fc38 fedora 848 k urw-base35-c059-fonts noarch 20200910-16.fc38 fedora 875 k urw-base35-d050000l-fonts noarch 20200910-16.fc38 fedora 76 k urw-base35-fonts noarch 20200910-16.fc38 fedora 11 k urw-base35-fonts-common noarch 20200910-16.fc38 fedora 21 k urw-base35-gothic-fonts noarch 20200910-16.fc38 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-16.fc38 fedora 796 k urw-base35-nimbus-roman-fonts noarch 20200910-16.fc38 fedora 857 k urw-base35-nimbus-sans-fonts noarch 20200910-16.fc38 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-16.fc38 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-16.fc38 fedora 42 k urw-base35-z003-fonts noarch 20200910-16.fc38 fedora 276 k wise2 x86_64 2.4.1-17.fc38 fedora 988 k xml-common noarch 0.6.3-60.fc38 fedora 31 k xorg-x11-fonts-ISO8859-1-100dpi noarch 7.5-35.fc38 fedora 1.1 M Transaction Summary =========================================================================================== Install 179 Packages Total download size: 208 M Installed size: 803 M Downloading Packages: (1/179): mysql-connector-python3-8.0.21-8.fc38. 7.1 MB/s | 553 kB 00:00 (2/179): protobuf-3.19.6-4.fc39.x86_64.rpm 11 MB/s | 1.0 MB 00:00 (3/179): python-pip-wheel-23.1.2-1.fc39.noarch. 23 MB/s | 1.4 MB 00:00 (4/179): graphviz-8.0.5-2.fc39.x86_64.rpm 32 MB/s | 4.9 MB 00:00 (5/179): python-setuptools-wheel-67.7.2-2.fc39. 10 MB/s | 662 kB 00:00 (6/179): python3-appdirs-1.4.4-8.fc38.noarch.rp 1.3 MB/s | 24 kB 00:00 (7/179): python3-cairo-1.23.0-2.fc38.x86_64.rpm 9.8 MB/s | 126 kB 00:00 (8/179): python3-dateutil-2.8.2-6.fc39.noarch.r 25 MB/s | 349 kB 00:00 (9/179): python3-brotli-1.0.9-11.fc38.x86_64.rp 9.5 MB/s | 320 kB 00:00 (10/179): python3-fs-2.4.16-2.fc39.noarch.rpm 7.6 MB/s | 282 kB 00:00 (11/179): python3-fonttools-4.40.0-2.fc39.x86_6 45 MB/s | 2.7 MB 00:00 (12/179): python3-idna-3.4-2.fc38.noarch.rpm 2.6 MB/s | 105 kB 00:00 (13/179): python3-isodate-0.6.1-7.fc39.noarch.r 4.1 MB/s | 69 kB 00:00 (14/179): python3-matplotlib-data-3.7.1-5.fc39. 12 MB/s | 526 kB 00:00 (15/179): python3-matplotlib-data-fonts-3.7.1-5 28 MB/s | 2.3 MB 00:00 (16/179): python3-matplotlib-tk-3.7.1-5.fc39.x8 1.3 MB/s | 53 kB 00:00 (17/179): python3-matplotlib-3.7.1-5.fc39.x86_6 42 MB/s | 4.1 MB 00:00 (18/179): python3-mysqlclient-2.1.1-3.fc38.x86_ 6.5 MB/s | 98 kB 00:00 (19/179): python3-munkres-1.1.2-14.fc38.noarch. 428 kB/s | 26 kB 00:00 (20/179): python3-numpy-1.24.3-1.fc39.x86_64.rp 82 MB/s | 7.6 MB 00:00 (21/179): python3-nose-1.3.7-40.fc38.noarch.rpm 3.4 MB/s | 327 kB 00:00 (22/179): python3-numpy-f2py-1.24.3-1.fc39.x86_ 9.3 MB/s | 462 kB 00:00 (23/179): python3-olefile-0.46-19.fc38.noarch.r 5.8 MB/s | 68 kB 00:00 (24/179): python3-packaging-23.1-1.fc39.noarch. 11 MB/s | 108 kB 00:00 (25/179): python3-pillow-9.5.0-1.fc39.x86_64.rp 41 MB/s | 884 kB 00:00 (26/179): python3-protobuf-3.19.6-4.fc39.x86_64 27 MB/s | 398 kB 00:00 (27/179): python3-psycopg2-2.9.6-1.fc39.x86_64. 19 MB/s | 202 kB 00:00 (28/179): python3-pygraphviz-1.11-1.fc39.x86_64 12 MB/s | 146 kB 00:00 (29/179): python3-pillow-tk-9.5.0-1.fc39.x86_64 1.1 MB/s | 31 kB 00:00 (30/179): python3-pyparsing-3.0.9-7.fc39.noarch 23 MB/s | 255 kB 00:00 (31/179): python3-rdflib-6.2.0-2.fc38.noarch.rp 48 MB/s | 906 kB 00:00 (32/179): python3-pysocks-1.7.1-17.fc39.noarch. 2.0 MB/s | 40 kB 00:00 (33/179): python3-six-1.16.0-9.fc38.noarch.rpm 1.8 MB/s | 43 kB 00:00 (34/179): python3-setuptools-67.7.2-2.fc39.noar 48 MB/s | 1.4 MB 00:00 (35/179): python3-urllib3+socks-1.26.15-1.fc39. 130 kB/s | 11 kB 00:00 (36/179): python3-urllib3-1.26.15-1.fc39.noarch 1.9 MB/s | 234 kB 00:00 (37/179): python3-scipy-1.10.1-3.fc39.x86_64.rp 88 MB/s | 21 MB 00:00 (38/179): adobe-mappings-cmap-deprecated-202301 501 kB/s | 113 kB 00:00 (39/179): annobin-docs-12.12-1.fc39.noarch.rpm 2.1 MB/s | 95 kB 00:00 (40/179): annobin-plugin-gcc-12.12-1.fc39.x86_6 5.5 MB/s | 894 kB 00:00 (41/179): avahi-libs-0.8-23.fc39.x86_64.rpm 1.4 MB/s | 67 kB 00:00 (42/179): adobe-mappings-pdf-20190401-3.fc38.no 1.4 MB/s | 698 kB 00:00 (43/179): cairo-1.17.8-4.fc39.x86_64.rpm 5.5 MB/s | 706 kB 00:00 (44/179): cairo-gobject-1.17.8-4.fc39.x86_64.rp 272 kB/s | 18 kB 00:00 (45/179): crypto-policies-scripts-20230614-1.gi 1.2 MB/s | 116 kB 00:00 (46/179): cups-libs-2.4.6-1.fc39.x86_64.rpm 2.0 MB/s | 266 kB 00:00 (47/179): dbus-libs-1.14.8-1.fc39.x86_64.rpm 1.6 MB/s | 156 kB 00:00 (48/179): adobe-mappings-cmap-20230118-1.fc38.n 1.8 MB/s | 2.1 MB 00:01 (49/179): expat-2.5.0-2.fc38.x86_64.rpm 1.7 MB/s | 110 kB 00:00 (50/179): flex-2.6.4-12.fc38.x86_64.rpm 1.5 MB/s | 313 kB 00:00 (51/179): flexiblas-3.3.1-3.fc39.x86_64.rpm 558 kB/s | 33 kB 00:00 (52/179): cpp-13.1.1-4.fc39.x86_64.rpm 12 MB/s | 11 MB 00:00 (53/179): dejavu-sans-fonts-2.37-20.fc38.noarch 2.6 MB/s | 1.3 MB 00:00 (54/179): flexiblas-openblas-openmp-3.3.1-3.fc3 279 kB/s | 17 kB 00:00 (55/179): fonts-filesystem-2.0.5-11.fc38.noarch 138 kB/s | 8.1 kB 00:00 (56/179): fontconfig-2.14.2-3.fc39.x86_64.rpm 2.0 MB/s | 296 kB 00:00 (57/179): freetype-2.13.1-1.fc39.x86_64.rpm 4.7 MB/s | 414 kB 00:00 (58/179): fribidi-1.0.13-1.fc39.x86_64.rpm 1.0 MB/s | 90 kB 00:00 (59/179): gc-8.2.2-3.fc38.x86_64.rpm 1.6 MB/s | 110 kB 00:00 (60/179): gcc-c++-13.1.1-4.fc39.x86_64.rpm 6.9 MB/s | 13 MB 00:01 (61/179): flexiblas-netlib-3.3.1-3.fc39.x86_64. 1.4 MB/s | 3.1 MB 00:02 (62/179): gcc-plugin-annobin-13.1.1-4.fc39.x86_ 608 kB/s | 45 kB 00:00 (63/179): gd-2.3.3-11.fc39.x86_64.rpm 946 kB/s | 139 kB 00:00 (64/179): gdk-pixbuf2-2.42.10-2.fc38.x86_64.rpm 3.4 MB/s | 485 kB 00:00 (65/179): glibc-devel-2.37.9000-14.fc39.x86_64. 1.0 MB/s | 74 kB 00:00 (66/179): glibc-headers-x86-2.37.9000-14.fc39.n 4.6 MB/s | 556 kB 00:00 (67/179): gnutls-3.8.0-6.fc39.x86_64.rpm 5.6 MB/s | 1.1 MB 00:00 (68/179): google-droid-sans-fonts-20200215-15.f 5.9 MB/s | 2.7 MB 00:00 (69/179): google-noto-fonts-common-20230601-3.f 241 kB/s | 16 kB 00:00 (70/179): google-noto-sans-vf-fonts-20230601-3. 3.2 MB/s | 582 kB 00:00 (71/179): graphite2-1.3.14-11.fc38.x86_64.rpm 1.4 MB/s | 95 kB 00:00 (72/179): gts-0.7.6-45.20121130.fc39.x86_64.rpm 3.4 MB/s | 239 kB 00:00 (73/179): glib2-2.76.3-1.fc39.x86_64.rpm 1.5 MB/s | 2.8 MB 00:01 (74/179): harfbuzz-7.3.0-1.fc39.x86_64.rpm 1.4 MB/s | 912 kB 00:00 (75/179): guile22-2.2.7-8.fc39.x86_64.rpm 4.5 MB/s | 6.5 MB 00:01 (76/179): jbig2dec-libs-0.19-8.fc38.x86_64.rpm 1.4 MB/s | 73 kB 00:00 (77/179): highway-1.0.4-1.fc39.x86_64.rpm 1.4 MB/s | 399 kB 00:00 (78/179): jbigkit-libs-2.1-25.fc38.x86_64.rpm 1.1 MB/s | 53 kB 00:00 (79/179): langpacks-core-font-en-3.0-35.fc39.no 210 kB/s | 9.9 kB 00:00 (80/179): lasi-1.1.3-10.fc38.x86_64.rpm 996 kB/s | 53 kB 00:00 (81/179): lcms2-2.15-1.fc39.x86_64.rpm 2.6 MB/s | 177 kB 00:00 (82/179): libICE-1.0.10-10.fc38.x86_64.rpm 1.0 MB/s | 71 kB 00:00 (83/179): libSM-1.2.3-12.fc38.x86_64.rpm 587 kB/s | 41 kB 00:00 (84/179): libX11-1.8.6-1.fc39.x86_64.rpm 3.2 MB/s | 649 kB 00:00 (85/179): libX11-common-1.8.6-1.fc39.noarch.rpm 2.4 MB/s | 175 kB 00:00 (86/179): libXau-1.0.11-2.fc38.x86_64.rpm 478 kB/s | 32 kB 00:00 (87/179): libXext-1.3.5-2.fc38.x86_64.rpm 491 kB/s | 39 kB 00:00 (88/179): libXft-2.3.8-2.fc39.x86_64.rpm 890 kB/s | 72 kB 00:00 (89/179): libXpm-3.5.15-3.fc38.x86_64.rpm 798 kB/s | 63 kB 00:00 (90/179): libXrender-0.9.11-2.fc38.x86_64.rpm 356 kB/s | 27 kB 00:00 (91/179): kernel-headers-6.4.0-1.fc39.x86_64.rp 1.4 MB/s | 1.5 MB 00:01 (92/179): libXt-1.2.1-4.fc38.x86_64.rpm 781 kB/s | 179 kB 00:00 (93/179): libavif-0.11.1-9.fc39.x86_64.rpm 1.1 MB/s | 84 kB 00:00 (94/179): libb2-0.98.1-8.fc38.x86_64.rpm 363 kB/s | 25 kB 00:00 (95/179): libdatrie-0.2.13-6.fc39.x86_64.rpm 433 kB/s | 32 kB 00:00 (96/179): libdav1d-1.2.1-1.fc39.x86_64.rpm 2.1 MB/s | 618 kB 00:00 (97/179): libfontenc-1.1.6-2.fc38.x86_64.rpm 504 kB/s | 32 kB 00:00 (98/179): libgfortran-13.1.1-4.fc39.x86_64.rpm 2.4 MB/s | 896 kB 00:00 (99/179): libaom-3.6.1-1.fc39.x86_64.rpm 1.4 MB/s | 1.8 MB 00:01 (100/179): libijs-0.35-17.fc38.x86_64.rpm 391 kB/s | 29 kB 00:00 (101/179): libimagequant-4.0.1-4.fc39.x86_64.rp 947 kB/s | 302 kB 00:00 (102/179): libjpeg-turbo-2.1.4-2.fc38.x86_64.rp 880 kB/s | 183 kB 00:00 (103/179): libgs-10.01.0-3.fc39.x86_64.rpm 1.9 MB/s | 3.5 MB 00:01 (104/179): libmpc-1.3.1-2.fc38.x86_64.rpm 1.2 MB/s | 70 kB 00:00 (105/179): libjxl-0.8.2-1.fc39.x86_64.rpm 1.0 MB/s | 1.2 MB 00:01 (106/179): libpaper-2.1.0-1.fc39.x86_64.rpm 504 kB/s | 26 kB 00:00 (107/179): libpng-1.6.37-14.fc38.x86_64.rpm 1.0 MB/s | 120 kB 00:00 (108/179): libpq-15.0-3.fc38.x86_64.rpm 1.8 MB/s | 213 kB 00:00 (109/179): libquadmath-13.1.1-4.fc39.x86_64.rpm 1.8 MB/s | 192 kB 00:00 (110/179): libqhull_r-7.2.1-12.fc38.x86_64.rpm 1.0 MB/s | 167 kB 00:00 (111/179): libraqm-0.8.0-4.fc38.x86_64.rpm 292 kB/s | 20 kB 00:00 (112/179): librsvg2-2.56.1-1.fc39.x86_64.rpm 964 kB/s | 1.5 MB 00:01 (113/179): libstdc++-devel-13.1.1-4.fc39.x86_64 1.5 MB/s | 2.6 MB 00:01 (114/179): libthai-0.1.29-5.fc39.x86_64.rpm 823 kB/s | 213 kB 00:00 (115/179): libtiff-4.4.0-5.fc38.x86_64.rpm 1.4 MB/s | 197 kB 00:00 (116/179): libtool-ltdl-2.4.7-6.fc38.x86_64.rpm 541 kB/s | 37 kB 00:00 (117/179): libvmaf-2.3.0-5.fc38.x86_64.rpm 1.3 MB/s | 180 kB 00:00 (118/179): libxcb-1.13.1-11.fc38.x86_64.rpm 1.3 MB/s | 231 kB 00:00 (119/179): libwebp-1.3.0-2.fc38.x86_64.rpm 907 kB/s | 282 kB 00:00 (120/179): libxcrypt-devel-4.4.35-1.fc39.x86_64 447 kB/s | 30 kB 00:00 (121/179): libxslt-1.1.38-1.fc39.x86_64.rpm 974 kB/s | 186 kB 00:00 (122/179): m4-1.4.19-4.fc37.x86_64.rpm 1.5 MB/s | 303 kB 00:00 (123/179): mariadb-connector-c-3.3.5-1.fc39.x86 1.2 MB/s | 208 kB 00:00 (124/179): mariadb-connector-c-config-3.3.5-1.f 95 kB/s | 8.6 kB 00:00 (125/179): mkfontscale-1.2.2-3.fc38.x86_64.rpm 383 kB/s | 32 kB 00:00 (126/179): mpdecimal-2.5.1-6.fc38.x86_64.rpm 1.0 MB/s | 89 kB 00:00 (127/179): netpbm-11.02.00-1.fc39.x86_64.rpm 1.1 MB/s | 185 kB 00:00 (128/179): make-4.4.1-1.fc39.x86_64.rpm 722 kB/s | 589 kB 00:00 (129/179): nettle-3.9.1-1.fc39.x86_64.rpm 1.0 MB/s | 425 kB 00:00 (130/179): nspr-4.35.0-8.fc39.x86_64.rpm 591 kB/s | 137 kB 00:00 (131/179): nss-3.90.0-2.fc39.x86_64.rpm 1.1 MB/s | 695 kB 00:00 (132/179): nss-softokn-freebl-3.90.0-2.fc39.x86 1.3 MB/s | 322 kB 00:00 (133/179): nss-sysinit-3.90.0-2.fc39.x86_64.rpm 273 kB/s | 18 kB 00:00 (134/179): nss-util-3.90.0-2.fc39.x86_64.rpm 1.1 MB/s | 86 kB 00:00 (135/179): openblas-0.3.21-4.fc38.x86_64.rpm 552 kB/s | 35 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(164/179): tk-8.6.12-4.fc38.x86_64.rpm 756 kB/s | 1.6 MB 00:02 (165/179): urw-base35-c059-fonts-20200910-16.fc 1.2 MB/s | 875 kB 00:00 (166/179): urw-base35-fonts-20200910-16.fc38.no 151 kB/s | 11 kB 00:00 (167/179): urw-base35-d050000l-fonts-20200910-1 526 kB/s | 76 kB 00:00 (168/179): urw-base35-fonts-common-20200910-16. 327 kB/s | 21 kB 00:00 (169/179): urw-base35-nimbus-mono-ps-fonts-2020 1.4 MB/s | 796 kB 00:00 (170/179): urw-base35-gothic-fonts-20200910-16. 956 kB/s | 643 kB 00:00 (171/179): urw-base35-nimbus-roman-fonts-202009 1.6 MB/s | 857 kB 00:00 (172/179): urw-base35-p052-fonts-20200910-16.fc 1.9 MB/s | 974 kB 00:00 (173/179): urw-base35-standard-symbols-ps-fonts 680 kB/s | 42 kB 00:00 (174/179): urw-base35-nimbus-sans-fonts-2020091 1.1 MB/s | 1.3 MB 00:01 (175/179): urw-base35-z003-fonts-20200910-16.fc 2.0 MB/s | 276 kB 00:00 (176/179): xml-common-0.6.3-60.fc38.noarch.rpm 715 kB/s | 31 kB 00:00 (177/179): xorg-x11-fonts-ISO8859-1-100dpi-7.5- 2.3 MB/s | 1.1 MB 00:00 (178/179): wise2-2.4.1-17.fc38.x86_64.rpm 1.3 MB/s | 988 kB 00:00 (179/179): gcc-13.1.1-4.fc39.x86_64.rpm 847 kB/s | 34 MB 00:40 -------------------------------------------------------------------------------- Total 4.8 MB/s | 208 MB 00:43 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : libpng-2:1.6.37-14.fc38.x86_64 1/179 Installing : nspr-4.35.0-8.fc39.x86_64 2/179 Installing : libjpeg-turbo-2.1.4-2.fc38.x86_64 3/179 Installing : fonts-filesystem-1:2.0.5-11.fc38.noarch 4/179 Installing : urw-base35-fonts-common-20200910-16.fc38.noarch 5/179 Installing : nss-util-3.90.0-2.fc39.x86_64 6/179 Installing : libwebp-1.3.0-2.fc38.x86_64 7/179 Installing : python-rpm-macros-3.11-10.fc39.noarch 8/179 Installing : openjpeg2-2.5.0-3.fc38.x86_64 9/179 Installing : libmpc-1.3.1-2.fc38.x86_64 10/179 Installing : libgfortran-13.1.1-4.fc39.x86_64 11/179 Installing : lcms2-2.15-1.fc39.x86_64 12/179 Installing : python3-rpm-macros-3.11-10.fc39.noarch 13/179 Installing : dejavu-sans-fonts-2.37-20.fc38.noarch 14/179 Installing : python3-matplotlib-data-fonts-3.7.1-5.fc39.noarc 15/179 Installing : python3-matplotlib-data-3.7.1-5.fc39.noarch 16/179 Installing : tcl-1:8.6.12-4.fc39.x86_64 17/179 Installing : libtool-ltdl-2.4.7-6.fc38.x86_64 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: crypto-policies-scripts-20230614-1.git5f3458e.fc 47/179 Verifying : cups-libs-1:2.4.6-1.fc39.x86_64 48/179 Verifying : dbus-libs-1:1.14.8-1.fc39.x86_64 49/179 Verifying : dejavu-sans-fonts-2.37-20.fc38.noarch 50/179 Verifying : expat-2.5.0-2.fc38.x86_64 51/179 Verifying : flex-2.6.4-12.fc38.x86_64 52/179 Verifying : flexiblas-3.3.1-3.fc39.x86_64 53/179 Verifying : flexiblas-netlib-3.3.1-3.fc39.x86_64 54/179 Verifying : flexiblas-openblas-openmp-3.3.1-3.fc39.x86_64 55/179 Verifying : fontconfig-2.14.2-3.fc39.x86_64 56/179 Verifying : fonts-filesystem-1:2.0.5-11.fc38.noarch 57/179 Verifying : freetype-2.13.1-1.fc39.x86_64 58/179 Verifying : fribidi-1.0.13-1.fc39.x86_64 59/179 Verifying : gc-8.2.2-3.fc38.x86_64 60/179 Verifying : gcc-13.1.1-4.fc39.x86_64 61/179 Verifying : gcc-c++-13.1.1-4.fc39.x86_64 62/179 Verifying : gcc-plugin-annobin-13.1.1-4.fc39.x86_64 63/179 Verifying : gd-2.3.3-11.fc39.x86_64 64/179 Verifying : gdk-pixbuf2-2.42.10-2.fc38.x86_64 65/179 Verifying : glib2-2.76.3-1.fc39.x86_64 66/179 Verifying : glibc-devel-2.37.9000-14.fc39.x86_64 67/179 Verifying : glibc-headers-x86-2.37.9000-14.fc39.noarch 68/179 Verifying : gnutls-3.8.0-6.fc39.x86_64 69/179 Verifying : google-droid-sans-fonts-20200215-15.fc39.noarch 70/179 Verifying : google-noto-fonts-common-20230601-3.fc39.noarch 71/179 Verifying : google-noto-sans-vf-fonts-20230601-3.fc39.noarch 72/179 Verifying : graphite2-1.3.14-11.fc38.x86_64 73/179 Verifying : gts-0.7.6-45.20121130.fc39.x86_64 74/179 Verifying : guile22-2.2.7-8.fc39.x86_64 75/179 Verifying : harfbuzz-7.3.0-1.fc39.x86_64 76/179 Verifying : highway-1.0.4-1.fc39.x86_64 77/179 Verifying : jbig2dec-libs-0.19-8.fc38.x86_64 78/179 Verifying : jbigkit-libs-2.1-25.fc38.x86_64 79/179 Verifying : kernel-headers-6.4.0-1.fc39.x86_64 80/179 Verifying : langpacks-core-font-en-3.0-35.fc39.noarch 81/179 Verifying : lasi-1.1.3-10.fc38.x86_64 82/179 Verifying : lcms2-2.15-1.fc39.x86_64 83/179 Verifying : libICE-1.0.10-10.fc38.x86_64 84/179 Verifying : libSM-1.2.3-12.fc38.x86_64 85/179 Verifying : libX11-1.8.6-1.fc39.x86_64 86/179 Verifying : libX11-common-1.8.6-1.fc39.noarch 87/179 Verifying : libXau-1.0.11-2.fc38.x86_64 88/179 Verifying : libXext-1.3.5-2.fc38.x86_64 89/179 Verifying : libXft-2.3.8-2.fc39.x86_64 90/179 Verifying : libXpm-3.5.15-3.fc38.x86_64 91/179 Verifying : libXrender-0.9.11-2.fc38.x86_64 92/179 Verifying : libXt-1.2.1-4.fc38.x86_64 93/179 Verifying : libaom-3.6.1-1.fc39.x86_64 94/179 Verifying : libavif-0.11.1-9.fc39.x86_64 95/179 Verifying : libb2-0.98.1-8.fc38.x86_64 96/179 Verifying : libdatrie-0.2.13-6.fc39.x86_64 97/179 Verifying : libdav1d-1.2.1-1.fc39.x86_64 98/179 Verifying : libfontenc-1.1.6-2.fc38.x86_64 99/179 Verifying : libgfortran-13.1.1-4.fc39.x86_64 100/179 Verifying : libgs-10.01.0-3.fc39.x86_64 101/179 Verifying : libijs-0.35-17.fc38.x86_64 102/179 Verifying : libimagequant-4.0.1-4.fc39.x86_64 103/179 Verifying : libjpeg-turbo-2.1.4-2.fc38.x86_64 104/179 Verifying : libjxl-1:0.8.2-1.fc39.x86_64 105/179 Verifying : libmpc-1.3.1-2.fc38.x86_64 106/179 Verifying : libpaper-1:2.1.0-1.fc39.x86_64 107/179 Verifying : libpng-2:1.6.37-14.fc38.x86_64 108/179 Verifying : libpq-15.0-3.fc38.x86_64 109/179 Verifying : libqhull_r-1:7.2.1-12.fc38.x86_64 110/179 Verifying : libquadmath-13.1.1-4.fc39.x86_64 111/179 Verifying : libraqm-0.8.0-4.fc38.x86_64 112/179 Verifying : librsvg2-2.56.1-1.fc39.x86_64 113/179 Verifying : libstdc++-devel-13.1.1-4.fc39.x86_64 114/179 Verifying : libthai-0.1.29-5.fc39.x86_64 115/179 Verifying : libtiff-4.4.0-5.fc38.x86_64 116/179 Verifying : libtool-ltdl-2.4.7-6.fc38.x86_64 117/179 Verifying : libvmaf-2.3.0-5.fc38.x86_64 118/179 Verifying : libwebp-1.3.0-2.fc38.x86_64 119/179 Verifying : libxcb-1.13.1-11.fc38.x86_64 120/179 Verifying : libxcrypt-devel-4.4.35-1.fc39.x86_64 121/179 Verifying : libxslt-1.1.38-1.fc39.x86_64 122/179 Verifying : m4-1.4.19-4.fc37.x86_64 123/179 Verifying : make-1:4.4.1-1.fc39.x86_64 124/179 Verifying : mariadb-connector-c-3.3.5-1.fc39.x86_64 125/179 Verifying : mariadb-connector-c-config-3.3.5-1.fc39.noarch 126/179 Verifying : mkfontscale-1.2.2-3.fc38.x86_64 127/179 Verifying : mpdecimal-2.5.1-6.fc38.x86_64 128/179 Verifying : netpbm-11.02.00-1.fc39.x86_64 129/179 Verifying : nettle-3.9.1-1.fc39.x86_64 130/179 Verifying : nspr-4.35.0-8.fc39.x86_64 131/179 Verifying : nss-3.90.0-2.fc39.x86_64 132/179 Verifying : nss-softokn-3.90.0-2.fc39.x86_64 133/179 Verifying : nss-softokn-freebl-3.90.0-2.fc39.x86_64 134/179 Verifying : nss-sysinit-3.90.0-2.fc39.x86_64 135/179 Verifying : nss-util-3.90.0-2.fc39.x86_64 136/179 Verifying : openblas-0.3.21-4.fc38.x86_64 137/179 Verifying : openblas-openmp-0.3.21-4.fc38.x86_64 138/179 Verifying : openjpeg2-2.5.0-3.fc38.x86_64 139/179 Verifying : pango-1.50.14-1.fc39.x86_64 140/179 Verifying : pixman-0.42.2-1.fc39.x86_64 141/179 Verifying : poppler-23.02.0-2.fc39.x86_64 142/179 Verifying : poppler-data-0.4.11-4.fc38.noarch 143/179 Verifying : poppler-glib-23.02.0-2.fc39.x86_64 144/179 Verifying : pyproject-rpm-macros-1.9.0-1.fc39.noarch 145/179 Verifying : python-rpm-macros-3.11-10.fc39.noarch 146/179 Verifying : python3-3.11.4-1.fc39.x86_64 147/179 Verifying : python3-biopython-1.81-1.fc39.x86_64 148/179 Verifying : python3-contourpy-1.0.7-2.fc38.x86_64 149/179 Verifying : python3-cycler-0.11.0-7.fc38.noarch 150/179 Verifying : python3-devel-3.11.4-1.fc39.x86_64 151/179 Verifying : python3-kiwisolver-1.4.4-7.fc38.x86_64 152/179 Verifying : python3-libs-3.11.4-1.fc39.x86_64 153/179 Verifying : python3-lxml-4.9.2-5.fc39.x86_64 154/179 Verifying : python3-networkx-3.1-1.fc39.noarch 155/179 Verifying : python3-reportlab-4.0.4-1.fc39.noarch 156/179 Verifying : python3-rpm-generators-14-6.fc39.noarch 157/179 Verifying : python3-rpm-macros-3.11-10.fc39.noarch 158/179 Verifying : python3-tkinter-3.11.4-1.fc39.x86_64 159/179 Verifying : rav1e-libs-0.6.6-1.fc39.x86_64 160/179 Verifying : shared-mime-info-2.2-3.fc38.x86_64 161/179 Verifying : svt-av1-libs-1.4.1-2.fc38.x86_64 162/179 Verifying : tcl-1:8.6.12-4.fc39.x86_64 163/179 Verifying : tk-1:8.6.12-4.fc38.x86_64 164/179 Verifying : urw-base35-bookman-fonts-20200910-16.fc38.noarch 165/179 Verifying : urw-base35-c059-fonts-20200910-16.fc38.noarch 166/179 Verifying : urw-base35-d050000l-fonts-20200910-16.fc38.noarc 167/179 Verifying : urw-base35-fonts-20200910-16.fc38.noarch 168/179 Verifying : urw-base35-fonts-common-20200910-16.fc38.noarch 169/179 Verifying : urw-base35-gothic-fonts-20200910-16.fc38.noarch 170/179 Verifying : urw-base35-nimbus-mono-ps-fonts-20200910-16.fc38 171/179 Verifying : urw-base35-nimbus-roman-fonts-20200910-16.fc38.n 172/179 Verifying : urw-base35-nimbus-sans-fonts-20200910-16.fc38.no 173/179 Verifying : urw-base35-p052-fonts-20200910-16.fc38.noarch 174/179 Verifying : urw-base35-standard-symbols-ps-fonts-20200910-16 175/179 Verifying : urw-base35-z003-fonts-20200910-16.fc38.noarch 176/179 Verifying : wise2-2.4.1-17.fc38.x86_64 177/179 Verifying : xml-common-0.6.3-60.fc38.noarch 178/179 Verifying : xorg-x11-fonts-ISO8859-1-100dpi-7.5-35.fc38.noar 179/179 Installed: adobe-mappings-cmap-20230118-1.fc38.noarch adobe-mappings-cmap-deprecated-20230118-1.fc38.noarch adobe-mappings-pdf-20190401-3.fc38.noarch annobin-docs-12.12-1.fc39.noarch annobin-plugin-gcc-12.12-1.fc39.x86_64 avahi-libs-0.8-23.fc39.x86_64 cairo-1.17.8-4.fc39.x86_64 cairo-gobject-1.17.8-4.fc39.x86_64 cpp-13.1.1-4.fc39.x86_64 crypto-policies-scripts-20230614-1.git5f3458e.fc39.noarch cups-libs-1:2.4.6-1.fc39.x86_64 dbus-libs-1:1.14.8-1.fc39.x86_64 dejavu-sans-fonts-2.37-20.fc38.noarch expat-2.5.0-2.fc38.x86_64 flex-2.6.4-12.fc38.x86_64 flexiblas-3.3.1-3.fc39.x86_64 flexiblas-netlib-3.3.1-3.fc39.x86_64 flexiblas-openblas-openmp-3.3.1-3.fc39.x86_64 fontconfig-2.14.2-3.fc39.x86_64 fonts-filesystem-1:2.0.5-11.fc38.noarch freetype-2.13.1-1.fc39.x86_64 fribidi-1.0.13-1.fc39.x86_64 gc-8.2.2-3.fc38.x86_64 gcc-13.1.1-4.fc39.x86_64 gcc-c++-13.1.1-4.fc39.x86_64 gcc-plugin-annobin-13.1.1-4.fc39.x86_64 gd-2.3.3-11.fc39.x86_64 gdk-pixbuf2-2.42.10-2.fc38.x86_64 glib2-2.76.3-1.fc39.x86_64 glibc-devel-2.37.9000-14.fc39.x86_64 glibc-headers-x86-2.37.9000-14.fc39.noarch gnutls-3.8.0-6.fc39.x86_64 google-droid-sans-fonts-20200215-15.fc39.noarch google-noto-fonts-common-20230601-3.fc39.noarch google-noto-sans-vf-fonts-20230601-3.fc39.noarch graphite2-1.3.14-11.fc38.x86_64 graphviz-8.0.5-2.fc39.x86_64 gts-0.7.6-45.20121130.fc39.x86_64 guile22-2.2.7-8.fc39.x86_64 harfbuzz-7.3.0-1.fc39.x86_64 highway-1.0.4-1.fc39.x86_64 jbig2dec-libs-0.19-8.fc38.x86_64 jbigkit-libs-2.1-25.fc38.x86_64 kernel-headers-6.4.0-1.fc39.x86_64 langpacks-core-font-en-3.0-35.fc39.noarch lasi-1.1.3-10.fc38.x86_64 lcms2-2.15-1.fc39.x86_64 libICE-1.0.10-10.fc38.x86_64 libSM-1.2.3-12.fc38.x86_64 libX11-1.8.6-1.fc39.x86_64 libX11-common-1.8.6-1.fc39.noarch libXau-1.0.11-2.fc38.x86_64 libXext-1.3.5-2.fc38.x86_64 libXft-2.3.8-2.fc39.x86_64 libXpm-3.5.15-3.fc38.x86_64 libXrender-0.9.11-2.fc38.x86_64 libXt-1.2.1-4.fc38.x86_64 libaom-3.6.1-1.fc39.x86_64 libavif-0.11.1-9.fc39.x86_64 libb2-0.98.1-8.fc38.x86_64 libdatrie-0.2.13-6.fc39.x86_64 libdav1d-1.2.1-1.fc39.x86_64 libfontenc-1.1.6-2.fc38.x86_64 libgfortran-13.1.1-4.fc39.x86_64 libgs-10.01.0-3.fc39.x86_64 libijs-0.35-17.fc38.x86_64 libimagequant-4.0.1-4.fc39.x86_64 libjpeg-turbo-2.1.4-2.fc38.x86_64 libjxl-1:0.8.2-1.fc39.x86_64 libmpc-1.3.1-2.fc38.x86_64 libpaper-1:2.1.0-1.fc39.x86_64 libpng-2:1.6.37-14.fc38.x86_64 libpq-15.0-3.fc38.x86_64 libqhull_r-1:7.2.1-12.fc38.x86_64 libquadmath-13.1.1-4.fc39.x86_64 libraqm-0.8.0-4.fc38.x86_64 librsvg2-2.56.1-1.fc39.x86_64 libstdc++-devel-13.1.1-4.fc39.x86_64 libthai-0.1.29-5.fc39.x86_64 libtiff-4.4.0-5.fc38.x86_64 libtool-ltdl-2.4.7-6.fc38.x86_64 libvmaf-2.3.0-5.fc38.x86_64 libwebp-1.3.0-2.fc38.x86_64 libxcb-1.13.1-11.fc38.x86_64 libxcrypt-devel-4.4.35-1.fc39.x86_64 libxslt-1.1.38-1.fc39.x86_64 m4-1.4.19-4.fc37.x86_64 make-1:4.4.1-1.fc39.x86_64 mariadb-connector-c-3.3.5-1.fc39.x86_64 mariadb-connector-c-config-3.3.5-1.fc39.noarch mkfontscale-1.2.2-3.fc38.x86_64 mpdecimal-2.5.1-6.fc38.x86_64 mysql-connector-python3-8.0.21-8.fc38.noarch netpbm-11.02.00-1.fc39.x86_64 nettle-3.9.1-1.fc39.x86_64 nspr-4.35.0-8.fc39.x86_64 nss-3.90.0-2.fc39.x86_64 nss-softokn-3.90.0-2.fc39.x86_64 nss-softokn-freebl-3.90.0-2.fc39.x86_64 nss-sysinit-3.90.0-2.fc39.x86_64 nss-util-3.90.0-2.fc39.x86_64 openblas-0.3.21-4.fc38.x86_64 openblas-openmp-0.3.21-4.fc38.x86_64 openjpeg2-2.5.0-3.fc38.x86_64 pango-1.50.14-1.fc39.x86_64 pixman-0.42.2-1.fc39.x86_64 poppler-23.02.0-2.fc39.x86_64 poppler-data-0.4.11-4.fc38.noarch poppler-glib-23.02.0-2.fc39.x86_64 protobuf-3.19.6-4.fc39.x86_64 pyproject-rpm-macros-1.9.0-1.fc39.noarch python-pip-wheel-23.1.2-1.fc39.noarch python-rpm-macros-3.11-10.fc39.noarch python-setuptools-wheel-67.7.2-2.fc39.noarch python3-3.11.4-1.fc39.x86_64 python3-appdirs-1.4.4-8.fc38.noarch python3-biopython-1.81-1.fc39.x86_64 python3-brotli-1.0.9-11.fc38.x86_64 python3-cairo-1.23.0-2.fc38.x86_64 python3-contourpy-1.0.7-2.fc38.x86_64 python3-cycler-0.11.0-7.fc38.noarch python3-dateutil-1:2.8.2-6.fc39.noarch python3-devel-3.11.4-1.fc39.x86_64 python3-fonttools-4.40.0-2.fc39.x86_64 python3-fs-2.4.16-2.fc39.noarch python3-idna-3.4-2.fc38.noarch python3-isodate-0.6.1-7.fc39.noarch python3-kiwisolver-1.4.4-7.fc38.x86_64 python3-libs-3.11.4-1.fc39.x86_64 python3-lxml-4.9.2-5.fc39.x86_64 python3-matplotlib-3.7.1-5.fc39.x86_64 python3-matplotlib-data-3.7.1-5.fc39.noarch python3-matplotlib-data-fonts-3.7.1-5.fc39.noarch python3-matplotlib-tk-3.7.1-5.fc39.x86_64 python3-munkres-1.1.2-14.fc38.noarch python3-mysqlclient-2.1.1-3.fc38.x86_64 python3-networkx-3.1-1.fc39.noarch python3-nose-1.3.7-40.fc38.noarch python3-numpy-1:1.24.3-1.fc39.x86_64 python3-numpy-f2py-1:1.24.3-1.fc39.x86_64 python3-olefile-0.46-19.fc38.noarch python3-packaging-23.1-1.fc39.noarch python3-pillow-9.5.0-1.fc39.x86_64 python3-pillow-tk-9.5.0-1.fc39.x86_64 python3-protobuf-3.19.6-4.fc39.x86_64 python3-psycopg2-2.9.6-1.fc39.x86_64 python3-pygraphviz-1.11-1.fc39.x86_64 python3-pyparsing-3.0.9-7.fc39.noarch python3-pysocks-1.7.1-17.fc39.noarch python3-rdflib-6.2.0-2.fc38.noarch python3-reportlab-4.0.4-1.fc39.noarch python3-rpm-generators-14-6.fc39.noarch python3-rpm-macros-3.11-10.fc39.noarch python3-scipy-1.10.1-3.fc39.x86_64 python3-setuptools-67.7.2-2.fc39.noarch python3-six-1.16.0-9.fc38.noarch python3-tkinter-3.11.4-1.fc39.x86_64 python3-urllib3-1.26.15-1.fc39.noarch python3-urllib3+socks-1.26.15-1.fc39.noarch rav1e-libs-0.6.6-1.fc39.x86_64 shared-mime-info-2.2-3.fc38.x86_64 svt-av1-libs-1.4.1-2.fc38.x86_64 tcl-1:8.6.12-4.fc39.x86_64 tk-1:8.6.12-4.fc38.x86_64 urw-base35-bookman-fonts-20200910-16.fc38.noarch urw-base35-c059-fonts-20200910-16.fc38.noarch urw-base35-d050000l-fonts-20200910-16.fc38.noarch urw-base35-fonts-20200910-16.fc38.noarch urw-base35-fonts-common-20200910-16.fc38.noarch urw-base35-gothic-fonts-20200910-16.fc38.noarch urw-base35-nimbus-mono-ps-fonts-20200910-16.fc38.noarch urw-base35-nimbus-roman-fonts-20200910-16.fc38.noarch urw-base35-nimbus-sans-fonts-20200910-16.fc38.noarch urw-base35-p052-fonts-20200910-16.fc38.noarch urw-base35-standard-symbols-ps-fonts-20200910-16.fc38.noarch urw-base35-z003-fonts-20200910-16.fc38.noarch wise2-2.4.1-17.fc38.x86_64 xml-common-0.6.3-60.fc38.noarch xorg-x11-fonts-ISO8859-1-100dpi-7.5-35.fc38.noarch Complete! Finish: build setup for ProDy-2.4.0-3.fc39.src.rpm Start: rpmbuild ProDy-2.4.0-3.fc39.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1688169600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.wrzL8u + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf ProDy-2.4.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/ProDy-2.4.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd ProDy-2.4.0 + /usr/bin/mkdir -p SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/ProDy-change_requires.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + find prody/proteins/ccealign -name '*.h' -exec chmod 0644 '{}' ';' + find prody/proteins/ccealign -name '*.cpp' -exec chmod 0644 '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.1vISov + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' running build running build_py creating build creating build/lib.linux-x86_64-cpython-311 creating build/lib.linux-x86_64-cpython-311/prody copying prody/__init__.py -> build/lib.linux-x86_64-cpython-311/prody creating build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/subset.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/selection.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/select.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/segment.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/residue.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/pointer.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/nbexclusion.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/improper.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/hierview.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/functions.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/flags.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/fields.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/donor.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/dihedral.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/crossterm.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/chain.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/bond.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/atommap.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/atomic.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/atomgroup.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/atom.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/angle.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/acceptor.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/atomic creating build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/uniprot.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/quartataweb.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/pfam.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/goa.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/dali.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/cath.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/database creating build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/vmdfile.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/signature.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/sampling.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/rtb.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/plotting.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/perturb.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/pca.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/nmdfile.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/nma.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/modeset.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/mode.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/mechstiff.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/imanm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/heatmapper.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/gnm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/gamma.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/functions.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/exgnm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/exanm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/essa.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/entropy.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/editing.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/compare.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/clustenm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/bbenm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/anm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/analysis.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/adaptive.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics creating build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/pdbensemble.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/functions.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/ensemble.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/conformation.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble creating build/lib.linux-x86_64-cpython-311/prody/kdtree copying prody/kdtree/kdtree.py -> build/lib.linux-x86_64-cpython-311/prody/kdtree copying prody/kdtree/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/kdtree creating build/lib.linux-x86_64-cpython-311/prody/measure copying prody/measure/transform.py -> build/lib.linux-x86_64-cpython-311/prody/measure copying prody/measure/measure.py -> build/lib.linux-x86_64-cpython-311/prody/measure copying prody/measure/contacts.py -> build/lib.linux-x86_64-cpython-311/prody/measure copying prody/measure/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/measure creating build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/wwpdb.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/stride.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/starfile.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/pdbfile.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/pdbclusters.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/localpdb.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/header.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/functions.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/emdfile.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/dssp.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/compare.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/cifheader.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/ciffile.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/blastpdb.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/proteins creating build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/sequence.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/plotting.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/msafile.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/msa.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/analysis.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/sequence creating build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/trajfile.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/trajectory.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/trajbase.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/psffile.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/frame.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/dcdfile.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory creating build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/straw.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/norm.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/hic.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/functions.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/cluster.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin creating build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/pdbligands.py -> build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/functions.py -> build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/ccd.py -> build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/bird.py -> build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/compounds creating build/lib.linux-x86_64-cpython-311/prody/domain_decomposition copying prody/domain_decomposition/spectrus.py -> build/lib.linux-x86_64-cpython-311/prody/domain_decomposition copying prody/domain_decomposition/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/domain_decomposition creating build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/settings.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/seqtools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/pathtools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/misctools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/logger.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/legacy.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/laptools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/eigtools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/drawtools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/doctools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/checkers.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/catchall.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/TreeConstruction.py -> build/lib.linux-x86_64-cpython-311/prody/utilities creating build/lib.linux-x86_64-cpython-311/prody/apps copying prody/apps/apptools.py -> build/lib.linux-x86_64-cpython-311/prody/apps copying prody/apps/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/apps creating build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_select.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_pca.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_gnm.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_fetch.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_energy.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_eda.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_contacts.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_catdcd.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_blast.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_biomol.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_anm.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_align.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/nmaoptions.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps creating build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_search.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_refine.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_rankorder.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_occupancy.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_merge.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_filter.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_fetch.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_conserv.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_coevol.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps creating build/lib.linux-x86_64-cpython-311/prody/tests copying prody/tests/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests creating build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_pca.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_gnm.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_examples.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_catdcd.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_anm.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps creating build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_subset.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_select.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_hierview.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_fragment.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_atommap.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_atomic.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic creating build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles creating build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/test_signature.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/test_pca.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/test_enms.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/test_editing.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics creating build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/test_pdbensemble.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/test_functions.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/test_ensemble.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/test_conformation.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble creating build/lib.linux-x86_64-cpython-311/prody/tests/kdtree copying prody/tests/kdtree/test_kdtree.py -> build/lib.linux-x86_64-cpython-311/prody/tests/kdtree copying prody/tests/kdtree/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/kdtree creating build/lib.linux-x86_64-cpython-311/prody/tests/measure copying prody/tests/measure/test_transform.py -> build/lib.linux-x86_64-cpython-311/prody/tests/measure copying prody/tests/measure/test_measure.py -> build/lib.linux-x86_64-cpython-311/prody/tests/measure copying prody/tests/measure/test_contacts.py -> build/lib.linux-x86_64-cpython-311/prody/tests/measure copying prody/tests/measure/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/measure creating build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_wwpdb.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_pdbfile.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_localpdb.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_header.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_dssp.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_ciffile.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins creating build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/test_sequence.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/test_msafile.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/test_msa.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/test_analysis.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence creating build/lib.linux-x86_64-cpython-311/prody/tests/trajectory copying prody/tests/trajectory/test_frame.py -> build/lib.linux-x86_64-cpython-311/prody/tests/trajectory copying prody/tests/trajectory/test_dcdfile.py -> build/lib.linux-x86_64-cpython-311/prody/tests/trajectory copying prody/tests/trajectory/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/trajectory creating build/lib.linux-x86_64-cpython-311/prody/tests/utilities copying prody/tests/utilities/test_pathtools.py -> build/lib.linux-x86_64-cpython-311/prody/tests/utilities copying prody/tests/utilities/test_misctools.py -> build/lib.linux-x86_64-cpython-311/prody/tests/utilities copying prody/tests/utilities/test_checkers.py -> build/lib.linux-x86_64-cpython-311/prody/tests/utilities copying prody/tests/utilities/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/utilities creating build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles copying prody/utilities/datafiles/saxs_water.dat -> build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles copying prody/utilities/datafiles/mod_res_map.dat -> build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles copying prody/tests/datafiles/pdbRTER.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb3p3w.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb3o21.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb3mht.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb3hsy.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb2nwl-opm.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_truncated.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_ca.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb2gb1_truncated.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi_ca.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1r19_dssp.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg_oneatom.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_vectors.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_evalues.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_sca.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_di.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/hit1ubi.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_vectors.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_evalues.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_vectors.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_evalues.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/commute1ubi.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_vectors.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_evalues.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_project.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_hessian.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_cov.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_hessian.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_hessian.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/dcd2k39_truncated.dcd -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/xmlSTI.xml -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.sth -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.slx -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.fasta -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6zu5.cif -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6yfy.cif -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles running build_ext building 'prody.dynamics.rtbtools' extension creating build/temp.linux-x86_64-cpython-311 creating build/temp.linux-x86_64-cpython-311/prody creating build/temp.linux-x86_64-cpython-311/prody/dynamics gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/dynamics/rtbtools.c -o build/temp.linux-x86_64-cpython-311/prody/dynamics/rtbtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-x86_64-cpython-311/prody/dynamics/rtbtools.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/dynamics/rtbtools.cpython-311-x86_64-linux-gnu.so building 'prody.dynamics.smtools' extension gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/dynamics/smtools.c -o build/temp.linux-x86_64-cpython-311/prody/dynamics/smtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-x86_64-cpython-311/prody/dynamics/smtools.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/dynamics/smtools.cpython-311-x86_64-linux-gnu.so building 'prody.sequence.msatools' extension creating build/temp.linux-x86_64-cpython-311/prody/sequence gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/sequence/msatools.c -o build/temp.linux-x86_64-cpython-311/prody/sequence/msatools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-x86_64-cpython-311/prody/sequence/msatools.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/sequence/msatools.cpython-311-x86_64-linux-gnu.so building 'prody.sequence.msaio' extension gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/sequence/msaio.c -o build/temp.linux-x86_64-cpython-311/prody/sequence/msaio.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-x86_64-cpython-311/prody/sequence/msaio.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/sequence/msaio.cpython-311-x86_64-linux-gnu.so building 'prody.sequence.seqtools' extension gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/sequence/seqtools.c -o build/temp.linux-x86_64-cpython-311/prody/sequence/seqtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-x86_64-cpython-311/prody/sequence/seqtools.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/sequence/seqtools.cpython-311-x86_64-linux-gnu.so building 'prody.kdtree._CKDTree' extension creating build/temp.linux-x86_64-cpython-311/prody/kdtree gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/kdtree/KDTree.c -o build/temp.linux-x86_64-cpython-311/prody/kdtree/KDTree.o gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/kdtree/KDTreemodule.c -o build/temp.linux-x86_64-cpython-311/prody/kdtree/KDTreemodule.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-x86_64-cpython-311/prody/kdtree/KDTree.o build/temp.linux-x86_64-cpython-311/prody/kdtree/KDTreemodule.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/kdtree/_CKDTree.cpython-311-x86_64-linux-gnu.so building 'prody.proteins.ccealign' extension creating build/temp.linux-x86_64-cpython-311/prody/proteins creating build/temp.linux-x86_64-cpython-311/prody/proteins/ccealign gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Iprody/utilities/tnt -I/usr/include/python3.11 -c prody/proteins/ccealign/ccealignmodule.cpp -o build/temp.linux-x86_64-cpython-311/prody/proteins/ccealign/ccealignmodule.o In file included from prody/utilities/tnt/tnt.h:41, from prody/proteins/ccealign/ccealignmodule.h:43, from prody/proteins/ccealign/ccealignmodule.cpp:38: In member function ‘TNT::Array1D::set_(double*, double*, double const&)’, inlined from ‘TNT::Array1D::Array1D(int, double const&)’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest(cePoint*, cePoint*, afp**, int, int, int)’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ~~~^~~ g++ -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-x86_64-cpython-311/prody/proteins/ccealign/ccealignmodule.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/proteins/ccealign.cpython-311-x86_64-linux-gnu.so In member function ‘set_’, inlined from ‘__ct ’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘__builtin_memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ^ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Huh4Xe + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64 ++ dirname /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64 --prefix /usr running install /usr/lib/python3.11/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer, pypa/build or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() running install_lib creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64 creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11 creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-cpython-311/prody/tests/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-cpython-311/prody/tests/utilities/test_checkers.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-cpython-311/prody/tests/utilities/test_misctools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-cpython-311/prody/tests/utilities/test_pathtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory copying build/lib.linux-x86_64-cpython-311/prody/tests/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory copying build/lib.linux-x86_64-cpython-311/prody/tests/trajectory/test_dcdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory copying build/lib.linux-x86_64-cpython-311/prody/tests/trajectory/test_frame.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/test_analysis.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/test_msa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/test_msafile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/test_sequence.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_ciffile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_dssp.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_header.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_localpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_pdbfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_wwpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure copying build/lib.linux-x86_64-cpython-311/prody/tests/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure copying build/lib.linux-x86_64-cpython-311/prody/tests/measure/test_contacts.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure copying build/lib.linux-x86_64-cpython-311/prody/tests/measure/test_measure.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure copying build/lib.linux-x86_64-cpython-311/prody/tests/measure/test_transform.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree copying build/lib.linux-x86_64-cpython-311/prody/tests/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree copying build/lib.linux-x86_64-cpython-311/prody/tests/kdtree/test_kdtree.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/test_conformation.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/test_ensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/test_functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/test_pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/test_editing.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/test_enms.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/test_pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/test_signature.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/mmcif_6yfy.cif -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/mmcif_6zu5.cif -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot.fasta -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot.slx -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot.sth -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/xmlSTI.xml -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/dcd2k39_truncated.dcd -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/anm1ubi_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/exanm2nwl_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pca2k39_cov.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/rtb2gb1_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/rtb2gb1_project.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/anm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/anm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/commute1ubi.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/exanm2nwl_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/exanm2nwl_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/gnm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/gnm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/hit1ubi.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot_di.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot_sca.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pca2k39_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pca2k39_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1ejg.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1r19_dssp.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1ubi.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1ubi_ca.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb2gb1_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb2k39_ca.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb2k39_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb2nwl-opm.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb3hsy.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb3mht.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb3o21.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb3p3w.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdbRTER.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_atomic.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_atommap.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_fragment.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_hierview.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_select.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_subset.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_anm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_examples.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_coevol.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_conserv.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_fetch.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_filter.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_merge.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_occupancy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_rankorder.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_refine.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_search.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/nmaoptions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_align.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_anm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_biomol.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_blast.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_contacts.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_eda.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_energy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_fetch.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_select.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps copying build/lib.linux-x86_64-cpython-311/prody/apps/apptools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/datafiles copying build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles/mod_res_map.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/datafiles copying build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles/saxs_water.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/datafiles copying build/lib.linux-x86_64-cpython-311/prody/utilities/TreeConstruction.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/catchall.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/checkers.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/doctools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/drawtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/eigtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/laptools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/legacy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/logger.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/misctools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/pathtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/seqtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/settings.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition copying build/lib.linux-x86_64-cpython-311/prody/domain_decomposition/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition copying build/lib.linux-x86_64-cpython-311/prody/domain_decomposition/spectrus.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/bird.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/ccd.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/pdbligands.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/cluster.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/hic.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/norm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/straw.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/dcdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/frame.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/psffile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/trajbase.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/trajectory.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/trajfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/seqtools.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/msaio.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/msatools.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/analysis.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/msa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/msafile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/plotting.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/sequence.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/ccealign.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/blastpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/ciffile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/cifheader.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/compare.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/dssp.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/emdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/header.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/localpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/pdbclusters.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/pdbfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/starfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/stride.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/wwpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/measure copying build/lib.linux-x86_64-cpython-311/prody/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/measure copying build/lib.linux-x86_64-cpython-311/prody/measure/contacts.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/measure copying build/lib.linux-x86_64-cpython-311/prody/measure/measure.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/measure copying build/lib.linux-x86_64-cpython-311/prody/measure/transform.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/measure creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree copying build/lib.linux-x86_64-cpython-311/prody/kdtree/_CKDTree.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree copying build/lib.linux-x86_64-cpython-311/prody/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree copying build/lib.linux-x86_64-cpython-311/prody/kdtree/kdtree.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/conformation.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/ensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/smtools.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/rtbtools.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/adaptive.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/analysis.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/anm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/bbenm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/clustenm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/compare.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/editing.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/entropy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/essa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/exanm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/exgnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/gamma.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/gnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/heatmapper.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/imanm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/mechstiff.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/mode.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/modeset.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/nma.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/nmdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/perturb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/plotting.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/rtb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/sampling.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/signature.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/vmdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/cath.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/dali.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/goa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/pfam.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/quartataweb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/uniprot.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database creating /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/acceptor.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/angle.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/atom.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/atomgroup.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/atomic.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/atommap.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/bond.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/chain.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/crossterm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/dihedral.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/donor.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/fields.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/flags.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/hierview.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/improper.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/nbexclusion.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/pointer.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/residue.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/segment.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/select.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/selection.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/subset.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities/test_checkers.py to test_checkers.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities/test_misctools.py to test_misctools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities/test_pathtools.py to test_pathtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory/test_dcdfile.py to test_dcdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory/test_frame.py to test_frame.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/test_analysis.py to test_analysis.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/test_msa.py to test_msa.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/test_msafile.py to test_msafile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/test_sequence.py to test_sequence.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_ciffile.py to test_ciffile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_dssp.py to test_dssp.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_header.py to test_header.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_localpdb.py to test_localpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_pdbfile.py to test_pdbfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_wwpdb.py to test_wwpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure/test_contacts.py to test_contacts.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure/test_measure.py to test_measure.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure/test_transform.py to test_transform.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree/test_kdtree.py to test_kdtree.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/test_conformation.py to test_conformation.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/test_ensemble.py to test_ensemble.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/test_functions.py to test_functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/test_pdbensemble.py to test_pdbensemble.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/test_editing.py to test_editing.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/test_enms.py to test_enms.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/test_pca.py to test_pca.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/test_signature.py to test_signature.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_atomic.py to test_atomic.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_atommap.py to test_atommap.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_fragment.py to test_fragment.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_hierview.py to test_hierview.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_select.py to test_select.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_subset.py to test_subset.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_anm.py to test_prody_anm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_catdcd.py to test_prody_catdcd.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_examples.py to test_prody_examples.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_gnm.py to test_prody_gnm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_pca.py to test_prody_pca.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_coevol.py to evol_coevol.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_conserv.py to evol_conserv.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_fetch.py to evol_fetch.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_filter.py to evol_filter.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_merge.py to evol_merge.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_occupancy.py to evol_occupancy.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_rankorder.py to evol_rankorder.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_refine.py to evol_refine.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_search.py to evol_search.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/nmaoptions.py to nmaoptions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_align.py to prody_align.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_anm.py to prody_anm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_biomol.py to prody_biomol.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_blast.py to prody_blast.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_catdcd.py to prody_catdcd.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_contacts.py to prody_contacts.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_eda.py to prody_eda.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_energy.py to prody_energy.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_fetch.py to prody_fetch.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_gnm.py to prody_gnm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_pca.py to prody_pca.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_select.py to prody_select.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/apps/apptools.py to apptools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/TreeConstruction.py to TreeConstruction.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/catchall.py to catchall.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/checkers.py to checkers.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/doctools.py to doctools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/drawtools.py to drawtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/eigtools.py to eigtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/laptools.py to laptools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/legacy.py to legacy.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/logger.py to logger.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/misctools.py to misctools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/pathtools.py to pathtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/seqtools.py to seqtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/settings.py to settings.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition/spectrus.py to spectrus.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/bird.py to bird.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/ccd.py to ccd.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/pdbligands.py to pdbligands.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/cluster.py to cluster.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/hic.py to hic.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/norm.py to norm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/straw.py to straw.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/dcdfile.py to dcdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/frame.py to frame.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/psffile.py to psffile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/trajbase.py to trajbase.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/trajectory.py to trajectory.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/trajfile.py to trajfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/analysis.py to analysis.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/msa.py to msa.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/msafile.py to msafile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/plotting.py to plotting.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/sequence.py to sequence.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/blastpdb.py to blastpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/ciffile.py to ciffile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/cifheader.py to cifheader.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/compare.py to compare.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/dssp.py to dssp.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/emdfile.py to emdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/header.py to header.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/localpdb.py to localpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/pdbclusters.py to pdbclusters.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/pdbfile.py to pdbfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/starfile.py to starfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/stride.py to stride.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/wwpdb.py to wwpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/measure/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/measure/contacts.py to contacts.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/measure/measure.py to measure.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/measure/transform.py to transform.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree/kdtree.py to kdtree.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/conformation.py to conformation.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/ensemble.py to ensemble.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/pdbensemble.py to pdbensemble.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/adaptive.py to adaptive.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/analysis.py to analysis.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/anm.py to anm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/bbenm.py to bbenm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/clustenm.py to clustenm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/compare.py to compare.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/editing.py to editing.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/entropy.py to entropy.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/essa.py to essa.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/exanm.py to exanm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/exgnm.py to exgnm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/gamma.py to gamma.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/gnm.py to gnm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/heatmapper.py to heatmapper.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/imanm.py to imanm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/mechstiff.py to mechstiff.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/mode.py to mode.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/modeset.py to modeset.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/nma.py to nma.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/nmdfile.py to nmdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/pca.py to pca.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/perturb.py to perturb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/plotting.py to plotting.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/rtb.py to rtb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/sampling.py to sampling.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/signature.py to signature.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/vmdfile.py to vmdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database/cath.py to cath.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database/dali.py to dali.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database/goa.py to goa.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database/pfam.py to pfam.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database/quartataweb.py to quartataweb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/database/uniprot.py to uniprot.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/acceptor.py to acceptor.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/angle.py to angle.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/atom.py to atom.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/atomgroup.py to atomgroup.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/atomic.py to atomic.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/atommap.py to atommap.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/bond.py to bond.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/chain.py to chain.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/crossterm.py to crossterm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/dihedral.py to dihedral.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/donor.py to donor.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/fields.py to fields.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/flags.py to flags.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/hierview.py to hierview.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/improper.py to improper.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/nbexclusion.py to nbexclusion.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/pointer.py to pointer.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/residue.py to residue.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/segment.py to segment.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/select.py to select.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/selection.py to selection.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/subset.py to subset.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/__init__.py to __init__.cpython-311.pyc writing byte-compilation script '/tmp/tmp4ixyfur1.py' /usr/bin/python3 /tmp/tmp4ixyfur1.py removing /tmp/tmp4ixyfur1.py running install_egg_info running egg_info creating ProDy.egg-info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt writing manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' Copying ProDy.egg-info to /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/ProDy-2.4.0-py3.11.egg-info running install_scripts Installing evol script to /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin Installing prody script to /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin + rm -rfv /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin/__pycache__ + mkdir -p /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin + rm -f /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin/evol /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin/prody + cd scripts + cp -pr ./prody ./python3.11-prody + cp -pr ./evol ./python3.11-evol + sed -i '1s=^#!/usr/bin/\(python\|env python\)[0-9.]*=#!/usr/bin/python3=' ./prody ./evol ./python3.11-prody ./python3.11-evol + for i in prody-3.11 + touch -r ./python3.11-prody prody-3.11 + install -p prody-3.11 /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin + install -p ./prody /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin + install -p ./python3.11-prody /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin + ln -sf /usr/bin/python3.11-prody /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin/prody-3.11 + for i in evol-3.11 + touch -r ./python3.11-evol evol-3.11 + install -p evol-3.11 /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin + install -p ./evol /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin + install -p ./python3.11-evol /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin + ln -sf /usr/bin/python3.11-evol /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/bin/evol-3.11 + cd .. + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.4.0-3.fc39 --unique-debug-suffix -2.4.0-3.fc39.x86_64 --unique-debug-src-base ProDy-2.4.0-3.fc39.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/ProDy-2.4.0 extracting debug info from /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/smtools.cpython-311-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/rtbtools.cpython-311-x86_64-linux-gnu.so /usr/bin/gdb.minimal /usr/bin/gdb.minimal extracting debug info from /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree/_CKDTree.cpython-311-x86_64-linux-gnu.so /usr/bin/gdb.minimal extracting debug info from /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/ccealign.cpython-311-x86_64-linux-gnu.so /usr/bin/gdb.minimal extracting debug info from /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/msaio.cpython-311-x86_64-linux-gnu.so /usr/bin/gdb.minimal extracting debug info from /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/msatools.cpython-311-x86_64-linux-gnu.so /usr/bin/gdb.minimal extracting debug info from /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/seqtools.cpython-311-x86_64-linux-gnu.so /usr/bin/gdb.minimal original debug info size: 632kB, size after compression: 564kB /usr/bin/sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match. 464 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib/debug/usr/lib64/python3.11 using python3.11 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/lib64/python3.11 using python3.11 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: python3-ProDy-2.4.0-3.fc39.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.UKhlw2 + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.4.0 + DOCDIR=/builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/share/doc/python3-ProDy + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/share/doc/python3-ProDy + cp -pr /builddir/build/BUILD/ProDy-2.4.0/README.rst /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/share/doc/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.w6NRRe + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.4.0 + LICENSEDIR=/builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/share/licenses/python3-ProDy + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/share/licenses/python3-ProDy + cp -pr /builddir/build/BUILD/ProDy-2.4.0/LICENSE.rst /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64/usr/share/licenses/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 warning: absolute symlink: /usr/bin/evol-3.11 -> /usr/bin/python3.11-evol warning: absolute symlink: /usr/bin/prody-3.11 -> /usr/bin/python3.11-prody Provides: ProDy = 0:2.4.0-3.fc39 python-ProDy = 2.4.0-3.fc39 python3-ProDy = 2.4.0-3.fc39 python3-ProDy(x86-64) = 2.4.0-3.fc39 python3.11-ProDy = 2.4.0-3.fc39 python3.11dist(prody) = 2.4 python3dist(prody) = 2.4 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.11 python3.11dist(biopython) python3.11dist(numpy) >= 1.10 python3.11dist(pyparsing) python3.11dist(scipy) python3.11dist(setuptools) Obsoletes: python-ProDy < 2.4.0-3.fc39 Processing files: ProDy-debugsource-2.4.0-3.fc39.x86_64 Provides: ProDy-debugsource = 2.4.0-3.fc39 ProDy-debugsource(x86-64) = 2.4.0-3.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-ProDy-debuginfo-2.4.0-3.fc39.x86_64 Provides: debuginfo(build-id) = 00558a9727154b78a2f0e13f0735eea3a1c0e9d6 debuginfo(build-id) = 2a3c126fc74e716f549d1eaa02d488d274ed1aaa debuginfo(build-id) = 3d5d488de88e9e07e7e7c87279f807757aa9651a debuginfo(build-id) = 6784ded47f850ab87e938a33892fe214beb687b5 debuginfo(build-id) = afa6133a7c4d0eee1afae7b25bb350bd7b49aff7 debuginfo(build-id) = cd211e201273b4ca5d24bf477479a763a8079a28 debuginfo(build-id) = e429f5ede604599294103fc9489a5565af8e02b3 python-ProDy-debuginfo = 2.4.0-3.fc39 python3-ProDy-debuginfo = 2.4.0-3.fc39 python3-ProDy-debuginfo(x86-64) = 2.4.0-3.fc39 python3.11-ProDy-debuginfo = 2.4.0-3.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: ProDy-debugsource(x86-64) = 2.4.0-3.fc39 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64 Wrote: /builddir/build/RPMS/python3-ProDy-debuginfo-2.4.0-3.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/ProDy-debugsource-2.4.0-3.fc39.x86_64.rpm Wrote: /builddir/build/RPMS/python3-ProDy-2.4.0-3.fc39.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.kRJXrb + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.4.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/ProDy-2.4.0-3.fc39.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.CWdLFr + umask 022 + cd /builddir/build/BUILD + rm -rf ProDy-2.4.0 ProDy-2.4.0.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: absolute symlink: /usr/bin/evol-3.11 -> /usr/bin/python3.11-evol absolute symlink: /usr/bin/prody-3.11 -> /usr/bin/python3.11-prody Finish: rpmbuild ProDy-2.4.0-3.fc39.src.rpm Finish: build phase for ProDy-2.4.0-3.fc39.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1688204662.982875/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1688204662.982875/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1688204662.982875/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/ProDy-2.4.0-3.fc39.src.rpm) Config(child) 2 minutes 6 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool