Warning: Permanently added '18.207.195.104' (ED25519) to the list of known hosts.
Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 5113795 --chroot fedora-rawhide-x86_64 --detached
Version: 0.62
PID: 5042
Logging PID: 5043
Task:
{'appstream': False,
'background': True,
'build_id': 5113795,
'buildroot_pkgs': [],
'chroot': 'fedora-rawhide-x86_64',
'enable_net': False,
'fedora_review': False,
'git_hash': '452a6fad4bc362555275e9e75c05b6391191db26',
'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes:pr:7/snakemake',
'isolation': 'default',
'memory_reqs': 2048,
'package_name': 'snakemake',
'package_version': '7.18.1-1',
'project_dirname': 'automatic-obsoletes:pr:7',
'project_name': 'automatic-obsoletes',
'project_owner': 'torsava',
'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/torsava/automatic-obsoletes/fedora-rawhide-x86_64/',
'id': 'copr_base',
'name': 'Copr repository'}],
'sandbox': 'torsava/automatic-obsoletes--https://src.fedoraproject.org/user/music',
'source_json': {},
'source_type': None,
'submitter': 'https://src.fedoraproject.org/user/music',
'tags': [],
'task_id': '5113795-fedora-rawhide-x86_64',
'timeout': 18000,
'uses_devel_repo': False,
'with_opts': [],
'without_opts': []}
Running: git clone https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes:pr:7/snakemake /var/lib/copr-rpmbuild/workspace/workdir-jh8vbzty/snakemake --depth 500 --no-single-branch --recursive
cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes:pr:7/snakemake', '/var/lib/copr-rpmbuild/workspace/workdir-jh8vbzty/snakemake', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout:
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-jh8vbzty/snakemake'...
Running: git checkout 452a6fad4bc362555275e9e75c05b6391191db26
cmd: ['git', 'checkout', '452a6fad4bc362555275e9e75c05b6391191db26']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-jh8vbzty/snakemake
rc: 0
stdout:
stderr: Note: switching to '452a6fad4bc362555275e9e75c05b6391191db26'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:
git switch -c <new-branch-name>
Or undo this operation with:
git switch -
Turn off this advice by setting config variable advice.detachedHead to false
HEAD is now at 452a6fa automatic import of snakemake
Running: copr-distgit-client sources
cmd: ['copr-distgit-client', 'sources']
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
cwd: /var/lib/copr-rpmbuild/workspace/workdir-jh8vbzty/snakemake
rc: 0
stdout:
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading snakemake-7.18.1.tar.gz
INFO: Calling: curl -H Pragma: -o snakemake-7.18.1.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/torsava/automatic-obsoletes:pr:7/snakemake/snakemake-7.18.1.tar.gz/md5/29883ab39313571ab11a921cf9a8118a/snakemake-7.18.1.tar.gz
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 8608k 100 8608k 0 0 109M 0 --:--:-- --:--:-- --:--:-- 110M
INFO: Reading stdout from command: md5sum snakemake-7.18.1.tar.gz
Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-jh8vbzty/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-jh8vbzty/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1670526512.550555 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 3.5 starting (python version = 3.11.0, NVR = mock-3.5-1.fc37)...
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-jh8vbzty/snakemake/snakemake.spec) Config(fedora-rawhide-x86_64)
Start: clean chroot
Finish: clean chroot
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1670526512.550555/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 3.5
INFO: Mock Version: 3.5
Start(bootstrap): dnf install
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Updating Subscription Management repositories.
Unable to read consumer identity
This system is not registered with an entitlement server. You can use subscription-manager to register.
Copr repository 52 MB/s | 14 MB 00:00
fedora 36 MB/s | 65 MB 00:01
Last metadata expiration check: 0:00:02 ago on Thu Dec 8 19:08:39 2022.
Dependencies resolved.
================================================================================
Package Arch Version Repo Size
================================================================================
Installing:
dnf noarch 4.14.0-1.fc38 fedora 480 k
dnf-plugins-core noarch 4.3.1-1.fc38 copr_base 35 k
Installing dependencies:
alternatives x86_64 1.21-1.fc38 fedora 38 k
audit-libs x86_64 3.0.9-1.fc38 copr_base 117 k
basesystem noarch 11-14.fc37 fedora 7.0 k
bash x86_64 5.2.9-3.fc38 fedora 1.8 M
bzip2-libs x86_64 1.0.8-12.fc37 fedora 41 k
ca-certificates noarch 2022.2.54-5.fc37 fedora 829 k
coreutils x86_64 9.1-8.fc38 fedora 1.1 M
coreutils-common x86_64 9.1-8.fc38 fedora 2.0 M
crypto-policies noarch 20221110-1.git87a75f4.fc38 fedora 90 k
curl x86_64 7.86.0-4.fc38 fedora 335 k
cyrus-sasl-lib x86_64 2.1.28-8.fc38 fedora 792 k
dbus-libs x86_64 1:1.14.4-1.fc38 fedora 156 k
dnf-data noarch 4.14.0-1.fc38 fedora 43 k
elfutils-default-yama-scope noarch 0.188-3.fc38 fedora 15 k
elfutils-libelf x86_64 0.188-3.fc38 fedora 196 k
elfutils-libs x86_64 0.188-3.fc38 fedora 257 k
expat x86_64 2.5.0-1.fc38 fedora 110 k
fedora-gpg-keys noarch 38-0.3 fedora 125 k
fedora-release noarch 38-0.6 fedora 11 k
fedora-release-common noarch 38-0.6 fedora 21 k
fedora-release-identity-basic
noarch 38-0.6 fedora 11 k
fedora-repos noarch 38-0.3 fedora 10 k
fedora-repos-rawhide noarch 38-0.3 fedora 9.7 k
file-libs x86_64 5.42-4.fc37 fedora 676 k
filesystem x86_64 3.18-2.fc37 fedora 1.1 M
findutils x86_64 1:4.9.0-2.fc37 fedora 492 k
gawk x86_64 5.1.1-4.fc37 fedora 1.0 M
gdbm-libs x86_64 1:1.23-2.fc37 fedora 56 k
glib2 x86_64 2.74.1-2.fc38 fedora 2.7 M
glibc x86_64 2.36.9000-13.fc38 fedora 2.1 M
glibc-common x86_64 2.36.9000-13.fc38 fedora 304 k
glibc-minimal-langpack x86_64 2.36.9000-13.fc38 fedora 25 k
gmp x86_64 1:6.2.1-3.fc37 fedora 315 k
gnupg2 x86_64 2.3.8-1.fc38 fedora 2.6 M
gnutls x86_64 3.7.8-9.fc38 fedora 1.1 M
gpgme x86_64 1.17.1-3.fc38 fedora 210 k
grep x86_64 3.8-1.fc38 fedora 292 k
ima-evm-utils x86_64 1.4-6.fc37 fedora 63 k
json-c x86_64 0.16-3.fc38 fedora 41 k
keyutils-libs x86_64 1.6.1-5.fc37 fedora 31 k
krb5-libs x86_64 1.20.1-3.fc38 fedora 723 k
libacl x86_64 2.3.1-4.fc37 fedora 23 k
libarchive x86_64 3.6.1-3.fc38 fedora 397 k
libassuan x86_64 2.5.5-5.fc37 fedora 67 k
libattr x86_64 2.5.1-5.fc37 fedora 18 k
libb2 x86_64 0.98.1-7.fc37 fedora 25 k
libblkid x86_64 2.38.1-2.fc38 copr_base 107 k
libbrotli x86_64 1.0.9-10.fc38 copr_base 315 k
libcap x86_64 2.48-5.fc37 fedora 67 k
libcap-ng x86_64 0.8.3-3.fc37 fedora 33 k
libcom_err x86_64 1.46.5-3.fc37 fedora 25 k
libcomps x86_64 0.1.18-4.fc37 fedora 76 k
libcurl x86_64 7.86.0-4.fc38 fedora 305 k
libdnf x86_64 0.68.0-1.fc38 fedora 673 k
libevent x86_64 2.1.12-7.fc37 fedora 261 k
libffi x86_64 3.4.4-1.fc38 fedora 38 k
libfsverity x86_64 1.4-8.fc37 fedora 19 k
libgcc x86_64 12.2.1-4.fc38 fedora 108 k
libgcrypt x86_64 1.10.1-6.fc38 fedora 511 k
libgomp x86_64 12.2.1-4.fc38 fedora 296 k
libgpg-error x86_64 1.46-1.fc38 fedora 227 k
libidn2 x86_64 2.3.4-1.fc38 fedora 160 k
libksba x86_64 1.6.2-1.fc38 fedora 158 k
libmodulemd x86_64 2.14.0-4.fc37 fedora 234 k
libmount x86_64 2.38.1-2.fc38 copr_base 135 k
libnghttp2 x86_64 1.51.0-1.fc38 fedora 75 k
libnsl2 x86_64 2.0.0-4.fc37 fedora 30 k
libpsl x86_64 0.21.1-6.fc37 fedora 63 k
librepo x86_64 1.14.4-1.fc38 fedora 94 k
libreport-filesystem noarch 2.17.6-1.fc38 copr_base 14 k
libselinux x86_64 3.4-6.fc38 fedora 86 k
libsemanage x86_64 3.4-6.fc38 fedora 120 k
libsepol x86_64 3.4-4.fc38 fedora 322 k
libsigsegv x86_64 2.14-3.fc37 fedora 27 k
libsmartcols x86_64 2.38.1-2.fc38 copr_base 65 k
libsolv x86_64 0.7.22-3.fc37 fedora 405 k
libssh x86_64 0.10.4-2.fc38 fedora 209 k
libssh-config noarch 0.10.4-2.fc38 fedora 8.8 k
libstdc++ x86_64 12.2.1-4.fc38 fedora 800 k
libtasn1 x86_64 4.19.0-1.fc38 fedora 75 k
libtirpc x86_64 1.3.3-0.fc37 fedora 93 k
libunistring x86_64 1.0-2.fc37 fedora 549 k
libuuid x86_64 2.38.1-2.fc38 copr_base 28 k
libverto x86_64 0.3.2-4.fc37 fedora 21 k
libxcrypt x86_64 4.4.33-3.fc38 fedora 120 k
libxml2 x86_64 2.10.3-2.fc38 copr_base 705 k
libyaml x86_64 0.2.5-8.fc37 fedora 60 k
libzstd x86_64 1.5.2-3.fc37 fedora 294 k
lua-libs x86_64 5.4.4-6.fc38 fedora 131 k
lz4-libs x86_64 1.9.3-5.fc37 fedora 70 k
mpdecimal x86_64 2.5.1-4.fc37 fedora 102 k
mpfr x86_64 4.1.1-2.fc38 fedora 598 k
ncurses-base noarch 6.3-4.20221126.fc38 fedora 86 k
ncurses-libs x86_64 6.3-4.20221126.fc38 fedora 335 k
nettle x86_64 3.8-2.fc37 fedora 414 k
npth x86_64 1.6-10.fc38 fedora 24 k
openldap x86_64 2.6.3-1.fc38 fedora 254 k
openssl-libs x86_64 1:3.0.5-6.fc38 fedora 2.1 M
p11-kit x86_64 0.24.1-3.fc37 fedora 376 k
p11-kit-trust x86_64 0.24.1-3.fc37 fedora 138 k
pcre2 x86_64 10.40-1.fc37.1 fedora 236 k
pcre2-syntax noarch 10.40-1.fc37.1 fedora 142 k
popt x86_64 1.19-1.fc38 fedora 66 k
publicsuffix-list-dafsa noarch 20210518-5.fc37 fedora 58 k
python-pip-wheel noarch 22.3.1-1.fc38 copr_base 1.4 M
python-setuptools-wheel noarch 65.5.1-1.fc38 copr_base 716 k
python3 x86_64 3.11.0-1.fc38 fedora 27 k
python3-dateutil noarch 1:2.8.2-4.fc37 fedora 361 k
python3-dbus x86_64 1.3.2-1.fc38 copr_base 147 k
python3-distro noarch 1.8.0-1.fc38 fedora 49 k
python3-dnf noarch 4.14.0-1.fc38 fedora 607 k
python3-dnf-plugins-core noarch 4.3.1-1.fc38 copr_base 263 k
python3-gpg x86_64 1.17.1-3.fc38 fedora 296 k
python3-hawkey x86_64 0.68.0-1.fc38 fedora 108 k
python3-libcomps x86_64 0.1.18-4.fc37 fedora 48 k
python3-libdnf x86_64 0.68.0-1.fc38 fedora 818 k
python3-libs x86_64 3.11.0-1.fc38 fedora 9.6 M
python3-rpm x86_64 4.18.0-8.fc38 copr_base 95 k
python3-six noarch 1.16.0-8.fc37 copr_base 43 k
readline x86_64 8.2-2.fc38 fedora 211 k
rpm x86_64 4.18.0-8.fc38 copr_base 544 k
rpm-build-libs x86_64 4.18.0-8.fc38 copr_base 95 k
rpm-libs x86_64 4.18.0-8.fc38 copr_base 310 k
rpm-sequoia x86_64 1.2.0-1.fc38 fedora 829 k
rpm-sign-libs x86_64 4.18.0-8.fc38 copr_base 27 k
sed x86_64 4.8-11.fc37 fedora 306 k
setup noarch 2.14.3-1.fc38 fedora 152 k
shadow-utils x86_64 2:4.13-3.fc38 fedora 1.3 M
sqlite-libs x86_64 3.40.0-1.fc38 fedora 661 k
systemd-libs x86_64 252.2-591.fc38 fedora 632 k
tpm2-tss x86_64 3.2.0-3.fc37 fedora 600 k
tzdata noarch 2022f-1.fc38 fedora 715 k
xz-libs x86_64 5.2.9-1.fc38 fedora 93 k
zchunk-libs x86_64 1.2.3-1.fc38 fedora 51 k
zlib x86_64 1.2.12-5.fc38 fedora 94 k
Transaction Summary
================================================================================
Install 137 Packages
Total download size: 57 M
Installed size: 199 M
Downloading Packages:
(1/137): dnf-plugins-core-4.3.1-1.fc38.noarch.r 582 kB/s | 35 kB 00:00
(2/137): audit-libs-3.0.9-1.fc38.x86_64.rpm 1.9 MB/s | 117 kB 00:00
(3/137): libmount-2.38.1-2.fc38.x86_64.rpm 16 MB/s | 135 kB 00:00
(4/137): libbrotli-1.0.9-10.fc38.x86_64.rpm 29 MB/s | 315 kB 00:00
(5/137): libreport-filesystem-2.17.6-1.fc38.noa 5.5 MB/s | 14 kB 00:00
(6/137): libsmartcols-2.38.1-2.fc38.x86_64.rpm 17 MB/s | 65 kB 00:00
(7/137): libuuid-2.38.1-2.fc38.x86_64.rpm 9.5 MB/s | 28 kB 00:00
(8/137): libblkid-2.38.1-2.fc38.x86_64.rpm 1.4 MB/s | 107 kB 00:00
(9/137): libxml2-2.10.3-2.fc38.x86_64.rpm 54 MB/s | 705 kB 00:00
(10/137): python3-dbus-1.3.2-1.fc38.x86_64.rpm 31 MB/s | 147 kB 00:00
(11/137): python-setuptools-wheel-65.5.1-1.fc38 40 MB/s | 716 kB 00:00
(12/137): python3-rpm-4.18.0-8.fc38.x86_64.rpm 19 MB/s | 95 kB 00:00
(13/137): python3-dnf-plugins-core-4.3.1-1.fc38 33 MB/s | 263 kB 00:00
(14/137): python-pip-wheel-22.3.1-1.fc38.noarch 51 MB/s | 1.4 MB 00:00
(15/137): python3-six-1.16.0-8.fc37.noarch.rpm 10 MB/s | 43 kB 00:00
(16/137): rpm-4.18.0-8.fc38.x86_64.rpm 48 MB/s | 544 kB 00:00
(17/137): rpm-build-libs-4.18.0-8.fc38.x86_64.r 9.7 MB/s | 95 kB 00:00
(18/137): rpm-libs-4.18.0-8.fc38.x86_64.rpm 28 MB/s | 310 kB 00:00
(19/137): rpm-sign-libs-4.18.0-8.fc38.x86_64.rp 674 kB/s | 27 kB 00:00
(20/137): alternatives-1.21-1.fc38.x86_64.rpm 912 kB/s | 38 kB 00:00
(21/137): basesystem-11-14.fc37.noarch.rpm 173 kB/s | 7.0 kB 00:00
(22/137): bzip2-libs-1.0.8-12.fc37.x86_64.rpm 18 MB/s | 41 kB 00:00
(23/137): bash-5.2.9-3.fc38.x86_64.rpm 178 MB/s | 1.8 MB 00:00
(24/137): coreutils-9.1-8.fc38.x86_64.rpm 130 MB/s | 1.1 MB 00:00
(25/137): ca-certificates-2022.2.54-5.fc37.noar 64 MB/s | 829 kB 00:00
(26/137): coreutils-common-9.1-8.fc38.x86_64.rp 279 MB/s | 2.0 MB 00:00
(27/137): crypto-policies-20221110-1.git87a75f4 11 MB/s | 90 kB 00:00
(28/137): curl-7.86.0-4.fc38.x86_64.rpm 62 MB/s | 335 kB 00:00
(29/137): cyrus-sasl-lib-2.1.28-8.fc38.x86_64.r 148 MB/s | 792 kB 00:00
(30/137): dbus-libs-1.14.4-1.fc38.x86_64.rpm 25 MB/s | 156 kB 00:00
(31/137): dnf-4.14.0-1.fc38.noarch.rpm 78 MB/s | 480 kB 00:00
(32/137): dnf-data-4.14.0-1.fc38.noarch.rpm 17 MB/s | 43 kB 00:00
(33/137): elfutils-default-yama-scope-0.188-3.f 11 MB/s | 15 kB 00:00
(34/137): elfutils-libelf-0.188-3.fc38.x86_64.r 77 MB/s | 196 kB 00:00
(35/137): elfutils-libs-0.188-3.fc38.x86_64.rpm 79 MB/s | 257 kB 00:00
(36/137): expat-2.5.0-1.fc38.x86_64.rpm 41 MB/s | 110 kB 00:00
(37/137): fedora-gpg-keys-38-0.3.noarch.rpm 56 MB/s | 125 kB 00:00
(38/137): fedora-release-38-0.6.noarch.rpm 5.8 MB/s | 11 kB 00:00
(39/137): fedora-release-common-38-0.6.noarch.r 11 MB/s | 21 kB 00:00
(40/137): fedora-release-identity-basic-38-0.6. 6.7 MB/s | 11 kB 00:00
(41/137): fedora-repos-38-0.3.noarch.rpm 7.5 MB/s | 10 kB 00:00
(42/137): fedora-repos-rawhide-38-0.3.noarch.rp 8.4 MB/s | 9.7 kB 00:00
(43/137): findutils-4.9.0-2.fc37.x86_64.rpm 86 MB/s | 492 kB 00:00
(44/137): file-libs-5.42-4.fc37.x86_64.rpm 77 MB/s | 676 kB 00:00
(45/137): filesystem-3.18-2.fc37.x86_64.rpm 107 MB/s | 1.1 MB 00:00
(46/137): gawk-5.1.1-4.fc37.x86_64.rpm 158 MB/s | 1.0 MB 00:00
(47/137): gdbm-libs-1.23-2.fc37.x86_64.rpm 23 MB/s | 56 kB 00:00
(48/137): glib2-2.74.1-2.fc38.x86_64.rpm 164 MB/s | 2.7 MB 00:00
(49/137): glibc-2.36.9000-13.fc38.x86_64.rpm 118 MB/s | 2.1 MB 00:00
(50/137): glibc-common-2.36.9000-13.fc38.x86_64 19 MB/s | 304 kB 00:00
(51/137): glibc-minimal-langpack-2.36.9000-13.f 14 MB/s | 25 kB 00:00
(52/137): gmp-6.2.1-3.fc37.x86_64.rpm 81 MB/s | 315 kB 00:00
(53/137): gnutls-3.7.8-9.fc38.x86_64.rpm 143 MB/s | 1.1 MB 00:00
(54/137): gpgme-1.17.1-3.fc38.x86_64.rpm 30 MB/s | 210 kB 00:00
(55/137): gnupg2-2.3.8-1.fc38.x86_64.rpm 165 MB/s | 2.6 MB 00:00
(56/137): grep-3.8-1.fc38.x86_64.rpm 49 MB/s | 292 kB 00:00
(57/137): ima-evm-utils-1.4-6.fc37.x86_64.rpm 14 MB/s | 63 kB 00:00
(58/137): json-c-0.16-3.fc38.x86_64.rpm 31 MB/s | 41 kB 00:00
(59/137): keyutils-libs-1.6.1-5.fc37.x86_64.rpm 17 MB/s | 31 kB 00:00
(60/137): krb5-libs-1.20.1-3.fc38.x86_64.rpm 170 MB/s | 723 kB 00:00
(61/137): libacl-2.3.1-4.fc37.x86_64.rpm 5.7 MB/s | 23 kB 00:00
(62/137): libarchive-3.6.1-3.fc38.x86_64.rpm 128 MB/s | 397 kB 00:00
(63/137): libassuan-2.5.5-5.fc37.x86_64.rpm 36 MB/s | 67 kB 00:00
(64/137): libb2-0.98.1-7.fc37.x86_64.rpm 24 MB/s | 25 kB 00:00
(65/137): libattr-2.5.1-5.fc37.x86_64.rpm 11 MB/s | 18 kB 00:00
(66/137): libcap-2.48-5.fc37.x86_64.rpm 33 MB/s | 67 kB 00:00
(67/137): libcap-ng-0.8.3-3.fc37.x86_64.rpm 25 MB/s | 33 kB 00:00
(68/137): libcom_err-1.46.5-3.fc37.x86_64.rpm 21 MB/s | 25 kB 00:00
(69/137): libdnf-0.68.0-1.fc38.x86_64.rpm 217 MB/s | 673 kB 00:00
(70/137): libcurl-7.86.0-4.fc38.x86_64.rpm 64 MB/s | 305 kB 00:00
(71/137): libcomps-0.1.18-4.fc37.x86_64.rpm 13 MB/s | 76 kB 00:00
(72/137): libevent-2.1.12-7.fc37.x86_64.rpm 110 MB/s | 261 kB 00:00
(73/137): libffi-3.4.4-1.fc38.x86_64.rpm 23 MB/s | 38 kB 00:00
(74/137): libgcc-12.2.1-4.fc38.x86_64.rpm 70 MB/s | 108 kB 00:00
(75/137): libgcrypt-1.10.1-6.fc38.x86_64.rpm 162 MB/s | 511 kB 00:00
(76/137): libfsverity-1.4-8.fc37.x86_64.rpm 4.0 MB/s | 19 kB 00:00
(77/137): libgomp-12.2.1-4.fc38.x86_64.rpm 118 MB/s | 296 kB 00:00
(78/137): libgpg-error-1.46-1.fc38.x86_64.rpm 105 MB/s | 227 kB 00:00
(79/137): libidn2-2.3.4-1.fc38.x86_64.rpm 94 MB/s | 160 kB 00:00
(80/137): libksba-1.6.2-1.fc38.x86_64.rpm 74 MB/s | 158 kB 00:00
(81/137): libmodulemd-2.14.0-4.fc37.x86_64.rpm 89 MB/s | 234 kB 00:00
(82/137): libnghttp2-1.51.0-1.fc38.x86_64.rpm 58 MB/s | 75 kB 00:00
(83/137): libnsl2-2.0.0-4.fc37.x86_64.rpm 20 MB/s | 30 kB 00:00
(84/137): libpsl-0.21.1-6.fc37.x86_64.rpm 39 MB/s | 63 kB 00:00
(85/137): librepo-1.14.4-1.fc38.x86_64.rpm 55 MB/s | 94 kB 00:00
(86/137): libselinux-3.4-6.fc38.x86_64.rpm 42 MB/s | 86 kB 00:00
(87/137): libsemanage-3.4-6.fc38.x86_64.rpm 47 MB/s | 120 kB 00:00
(88/137): libsepol-3.4-4.fc38.x86_64.rpm 172 MB/s | 322 kB 00:00
(89/137): libsigsegv-2.14-3.fc37.x86_64.rpm 13 MB/s | 27 kB 00:00
(90/137): libsolv-0.7.22-3.fc37.x86_64.rpm 119 MB/s | 405 kB 00:00
(91/137): libssh-0.10.4-2.fc38.x86_64.rpm 115 MB/s | 209 kB 00:00
(92/137): libssh-config-0.10.4-2.fc38.noarch.rp 4.5 MB/s | 8.8 kB 00:00
(93/137): libstdc++-12.2.1-4.fc38.x86_64.rpm 209 MB/s | 800 kB 00:00
(94/137): libtasn1-4.19.0-1.fc38.x86_64.rpm 36 MB/s | 75 kB 00:00
(95/137): libtirpc-1.3.3-0.fc37.x86_64.rpm 40 MB/s | 93 kB 00:00
(96/137): libunistring-1.0-2.fc37.x86_64.rpm 197 MB/s | 549 kB 00:00
(97/137): libverto-0.3.2-4.fc37.x86_64.rpm 13 MB/s | 21 kB 00:00
(98/137): libxcrypt-4.4.33-3.fc38.x86_64.rpm 62 MB/s | 120 kB 00:00
(99/137): libyaml-0.2.5-8.fc37.x86_64.rpm 44 MB/s | 60 kB 00:00
(100/137): libzstd-1.5.2-3.fc37.x86_64.rpm 151 MB/s | 294 kB 00:00
(101/137): lua-libs-5.4.4-6.fc38.x86_64.rpm 55 MB/s | 131 kB 00:00
(102/137): lz4-libs-1.9.3-5.fc37.x86_64.rpm 26 MB/s | 70 kB 00:00
(103/137): mpdecimal-2.5.1-4.fc37.x86_64.rpm 85 MB/s | 102 kB 00:00
(104/137): mpfr-4.1.1-2.fc38.x86_64.rpm 174 MB/s | 598 kB 00:00
(105/137): ncurses-base-6.3-4.20221126.fc38.noa 26 MB/s | 86 kB 00:00
(106/137): ncurses-libs-6.3-4.20221126.fc38.x86 127 MB/s | 335 kB 00:00
(107/137): nettle-3.8-2.fc37.x86_64.rpm 178 MB/s | 414 kB 00:00
(108/137): npth-1.6-10.fc38.x86_64.rpm 8.6 MB/s | 24 kB 00:00
(109/137): openldap-2.6.3-1.fc38.x86_64.rpm 31 MB/s | 254 kB 00:00
(110/137): p11-kit-0.24.1-3.fc37.x86_64.rpm 47 MB/s | 376 kB 00:00
(111/137): openssl-libs-3.0.5-6.fc38.x86_64.rpm 185 MB/s | 2.1 MB 00:00
(112/137): p11-kit-trust-0.24.1-3.fc37.x86_64.r 29 MB/s | 138 kB 00:00
(113/137): pcre2-10.40-1.fc37.1.x86_64.rpm 53 MB/s | 236 kB 00:00
(114/137): pcre2-syntax-10.40-1.fc37.1.noarch.r 78 MB/s | 142 kB 00:00
(115/137): popt-1.19-1.fc38.x86_64.rpm 49 MB/s | 66 kB 00:00
(116/137): publicsuffix-list-dafsa-20210518-5.f 29 MB/s | 58 kB 00:00
(117/137): python3-3.11.0-1.fc38.x86_64.rpm 9.0 MB/s | 27 kB 00:00
(118/137): python3-dateutil-2.8.2-4.fc37.noarch 77 MB/s | 361 kB 00:00
(119/137): python3-distro-1.8.0-1.fc38.noarch.r 10 MB/s | 49 kB 00:00
(120/137): python3-gpg-1.17.1-3.fc38.x86_64.rpm 136 MB/s | 296 kB 00:00
(121/137): python3-dnf-4.14.0-1.fc38.noarch.rpm 81 MB/s | 607 kB 00:00
(122/137): python3-hawkey-0.68.0-1.fc38.x86_64. 27 MB/s | 108 kB 00:00
(123/137): python3-libcomps-0.1.18-4.fc37.x86_6 25 MB/s | 48 kB 00:00
(124/137): python3-libdnf-0.68.0-1.fc38.x86_64. 126 MB/s | 818 kB 00:00
(125/137): readline-8.2-2.fc38.x86_64.rpm 19 MB/s | 211 kB 00:00
(126/137): rpm-sequoia-1.2.0-1.fc38.x86_64.rpm 76 MB/s | 829 kB 00:00
(127/137): sed-4.8-11.fc37.x86_64.rpm 35 MB/s | 306 kB 00:00
(128/137): python3-libs-3.11.0-1.fc38.x86_64.rp 264 MB/s | 9.6 MB 00:00
(129/137): setup-2.14.3-1.fc38.noarch.rpm 10 MB/s | 152 kB 00:00
(130/137): shadow-utils-4.13-3.fc38.x86_64.rpm 80 MB/s | 1.3 MB 00:00
(131/137): sqlite-libs-3.40.0-1.fc38.x86_64.rpm 126 MB/s | 661 kB 00:00
(132/137): systemd-libs-252.2-591.fc38.x86_64.r 99 MB/s | 632 kB 00:00
(133/137): tpm2-tss-3.2.0-3.fc37.x86_64.rpm 145 MB/s | 600 kB 00:00
(134/137): tzdata-2022f-1.fc38.noarch.rpm 193 MB/s | 715 kB 00:00
(135/137): xz-libs-5.2.9-1.fc38.x86_64.rpm 23 MB/s | 93 kB 00:00
(136/137): zchunk-libs-1.2.3-1.fc38.x86_64.rpm 13 MB/s | 51 kB 00:00
(137/137): zlib-1.2.12-5.fc38.x86_64.rpm 56 MB/s | 94 kB 00:00
--------------------------------------------------------------------------------
Total 114 MB/s | 57 MB 00:00
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0xEB10B464:
Userid : "Fedora (38) <fedora-38-primary@fedoraproject.org>"
Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary
Key imported successfully
fedora 1.6 MB/s | 1.6 kB 00:00
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary (0xEB10B464) is already installed
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0x5323552A:
Userid : "Fedora (37) <fedora-37-primary@fedoraproject.org>"
Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Running scriptlet: filesystem-3.18-2.fc37.x86_64 1/1
Preparing : 1/1
Installing : libgcc-12.2.1-4.fc38.x86_64 1/137
Running scriptlet: libgcc-12.2.1-4.fc38.x86_64 1/137
Installing : crypto-policies-20221110-1.git87a75f4.fc38.noarc 2/137
Running scriptlet: crypto-policies-20221110-1.git87a75f4.fc38.noarc 2/137
Installing : tzdata-2022f-1.fc38.noarch 3/137
Installing : fedora-release-identity-basic-38-0.6.noarch 4/137
Installing : publicsuffix-list-dafsa-20210518-5.fc37.noarch 5/137
Installing : pcre2-syntax-10.40-1.fc37.1.noarch 6/137
Installing : ncurses-base-6.3-4.20221126.fc38.noarch 7/137
Installing : libssh-config-0.10.4-2.fc38.noarch 8/137
Installing : fedora-gpg-keys-38-0.3.noarch 9/137
Installing : fedora-release-38-0.6.noarch 10/137
Installing : fedora-release-common-38-0.6.noarch 11/137
Installing : fedora-repos-rawhide-38-0.3.noarch 12/137
Installing : fedora-repos-38-0.3.noarch 13/137
Installing : setup-2.14.3-1.fc38.noarch 14/137
Running scriptlet: setup-2.14.3-1.fc38.noarch 14/137
Installing : filesystem-3.18-2.fc37.x86_64 15/137
Installing : basesystem-11-14.fc37.noarch 16/137
Installing : glibc-minimal-langpack-2.36.9000-13.fc38.x86_64 17/137
Installing : glibc-common-2.36.9000-13.fc38.x86_64 18/137
Running scriptlet: glibc-2.36.9000-13.fc38.x86_64 19/137
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Running scriptlet: glibc-2.36.9000-13.fc38.x86_64 19/137
Installing : ncurses-libs-6.3-4.20221126.fc38.x86_64 20/137
Installing : bash-5.2.9-3.fc38.x86_64 21/137
Running scriptlet: bash-5.2.9-3.fc38.x86_64 21/137
Installing : zlib-1.2.12-5.fc38.x86_64 22/137
Installing : bzip2-libs-1.0.8-12.fc37.x86_64 23/137
Installing : xz-libs-5.2.9-1.fc38.x86_64 24/137
Installing : libzstd-1.5.2-3.fc37.x86_64 25/137
Installing : sqlite-libs-3.40.0-1.fc38.x86_64 26/137
Installing : gmp-1:6.2.1-3.fc37.x86_64 27/137
Installing : libcap-2.48-5.fc37.x86_64 28/137
Installing : libgpg-error-1.46-1.fc38.x86_64 29/137
Installing : popt-1.19-1.fc38.x86_64 30/137
Installing : libxml2-2.10.3-2.fc38.x86_64 31/137
Installing : libstdc++-12.2.1-4.fc38.x86_64 32/137
Installing : lua-libs-5.4.4-6.fc38.x86_64 33/137
Installing : elfutils-libelf-0.188-3.fc38.x86_64 34/137
Installing : file-libs-5.42-4.fc37.x86_64 35/137
Installing : readline-8.2-2.fc38.x86_64 36/137
Installing : libuuid-2.38.1-2.fc38.x86_64 37/137
Installing : libattr-2.5.1-5.fc37.x86_64 38/137
Installing : libacl-2.3.1-4.fc37.x86_64 39/137
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Installing : libidn2-2.3.4-1.fc38.x86_64 43/137
Installing : libxcrypt-4.4.33-3.fc38.x86_64 44/137
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Installing : libassuan-2.5.5-5.fc37.x86_64 46/137
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Installing : libsmartcols-2.38.1-2.fc38.x86_64 49/137
Installing : expat-2.5.0-1.fc38.x86_64 50/137
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Installing : json-c-0.16-3.fc38.x86_64 52/137
Installing : keyutils-libs-1.6.1-5.fc37.x86_64 53/137
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Installing : libgomp-12.2.1-4.fc38.x86_64 55/137
Installing : libsepol-3.4-4.fc38.x86_64 56/137
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Installing : sed-4.8-11.fc37.x86_64 58/137
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Installing : libb2-0.98.1-7.fc37.x86_64 64/137
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Installing : libgcrypt-1.10.1-6.fc38.x86_64 72/137
Installing : libksba-1.6.2-1.fc38.x86_64 73/137
Installing : mpfr-4.1.1-2.fc38.x86_64 74/137
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Installing : elfutils-libs-0.188-3.fc38.x86_64 76/137
Installing : libbrotli-1.0.9-10.fc38.x86_64 77/137
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Installing : gnutls-3.7.8-9.fc38.x86_64 80/137
Installing : glib2-2.74.1-2.fc38.x86_64 81/137
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Installing : libarchive-3.6.1-3.fc38.x86_64 107/137
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Installing : libdnf-0.68.0-1.fc38.x86_64 114/137
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warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew
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Running scriptlet: rpm-4.18.0-8.fc38.x86_64 137/137
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Verifying : fedora-release-identity-basic-38-0.6.noarch 40/137
Verifying : fedora-repos-38-0.3.noarch 41/137
Verifying : fedora-repos-rawhide-38-0.3.noarch 42/137
Verifying : file-libs-5.42-4.fc37.x86_64 43/137
Verifying : filesystem-3.18-2.fc37.x86_64 44/137
Verifying : findutils-1:4.9.0-2.fc37.x86_64 45/137
Verifying : gawk-5.1.1-4.fc37.x86_64 46/137
Verifying : gdbm-libs-1:1.23-2.fc37.x86_64 47/137
Verifying : glib2-2.74.1-2.fc38.x86_64 48/137
Verifying : glibc-2.36.9000-13.fc38.x86_64 49/137
Verifying : glibc-common-2.36.9000-13.fc38.x86_64 50/137
Verifying : glibc-minimal-langpack-2.36.9000-13.fc38.x86_64 51/137
Verifying : gmp-1:6.2.1-3.fc37.x86_64 52/137
Verifying : gnupg2-2.3.8-1.fc38.x86_64 53/137
Verifying : gnutls-3.7.8-9.fc38.x86_64 54/137
Verifying : gpgme-1.17.1-3.fc38.x86_64 55/137
Verifying : grep-3.8-1.fc38.x86_64 56/137
Verifying : ima-evm-utils-1.4-6.fc37.x86_64 57/137
Verifying : json-c-0.16-3.fc38.x86_64 58/137
Verifying : keyutils-libs-1.6.1-5.fc37.x86_64 59/137
Verifying : krb5-libs-1.20.1-3.fc38.x86_64 60/137
Verifying : libacl-2.3.1-4.fc37.x86_64 61/137
Verifying : libarchive-3.6.1-3.fc38.x86_64 62/137
Verifying : libassuan-2.5.5-5.fc37.x86_64 63/137
Verifying : libattr-2.5.1-5.fc37.x86_64 64/137
Verifying : libb2-0.98.1-7.fc37.x86_64 65/137
Verifying : libcap-2.48-5.fc37.x86_64 66/137
Verifying : libcap-ng-0.8.3-3.fc37.x86_64 67/137
Verifying : libcom_err-1.46.5-3.fc37.x86_64 68/137
Verifying : libcomps-0.1.18-4.fc37.x86_64 69/137
Verifying : libcurl-7.86.0-4.fc38.x86_64 70/137
Verifying : libdnf-0.68.0-1.fc38.x86_64 71/137
Verifying : libevent-2.1.12-7.fc37.x86_64 72/137
Verifying : libffi-3.4.4-1.fc38.x86_64 73/137
Verifying : libfsverity-1.4-8.fc37.x86_64 74/137
Verifying : libgcc-12.2.1-4.fc38.x86_64 75/137
Verifying : libgcrypt-1.10.1-6.fc38.x86_64 76/137
Verifying : libgomp-12.2.1-4.fc38.x86_64 77/137
Verifying : libgpg-error-1.46-1.fc38.x86_64 78/137
Verifying : libidn2-2.3.4-1.fc38.x86_64 79/137
Verifying : libksba-1.6.2-1.fc38.x86_64 80/137
Verifying : libmodulemd-2.14.0-4.fc37.x86_64 81/137
Verifying : libnghttp2-1.51.0-1.fc38.x86_64 82/137
Verifying : libnsl2-2.0.0-4.fc37.x86_64 83/137
Verifying : libpsl-0.21.1-6.fc37.x86_64 84/137
Verifying : librepo-1.14.4-1.fc38.x86_64 85/137
Verifying : libselinux-3.4-6.fc38.x86_64 86/137
Verifying : libsemanage-3.4-6.fc38.x86_64 87/137
Verifying : libsepol-3.4-4.fc38.x86_64 88/137
Verifying : libsigsegv-2.14-3.fc37.x86_64 89/137
Verifying : libsolv-0.7.22-3.fc37.x86_64 90/137
Verifying : libssh-0.10.4-2.fc38.x86_64 91/137
Verifying : libssh-config-0.10.4-2.fc38.noarch 92/137
Verifying : libstdc++-12.2.1-4.fc38.x86_64 93/137
Verifying : libtasn1-4.19.0-1.fc38.x86_64 94/137
Verifying : libtirpc-1.3.3-0.fc37.x86_64 95/137
Verifying : libunistring-1.0-2.fc37.x86_64 96/137
Verifying : libverto-0.3.2-4.fc37.x86_64 97/137
Verifying : libxcrypt-4.4.33-3.fc38.x86_64 98/137
Verifying : libyaml-0.2.5-8.fc37.x86_64 99/137
Verifying : libzstd-1.5.2-3.fc37.x86_64 100/137
Verifying : lua-libs-5.4.4-6.fc38.x86_64 101/137
Verifying : lz4-libs-1.9.3-5.fc37.x86_64 102/137
Verifying : mpdecimal-2.5.1-4.fc37.x86_64 103/137
Verifying : mpfr-4.1.1-2.fc38.x86_64 104/137
Verifying : ncurses-base-6.3-4.20221126.fc38.noarch 105/137
Verifying : ncurses-libs-6.3-4.20221126.fc38.x86_64 106/137
Verifying : nettle-3.8-2.fc37.x86_64 107/137
Verifying : npth-1.6-10.fc38.x86_64 108/137
Verifying : openldap-2.6.3-1.fc38.x86_64 109/137
Verifying : openssl-libs-1:3.0.5-6.fc38.x86_64 110/137
Verifying : p11-kit-0.24.1-3.fc37.x86_64 111/137
Verifying : p11-kit-trust-0.24.1-3.fc37.x86_64 112/137
Verifying : pcre2-10.40-1.fc37.1.x86_64 113/137
Verifying : pcre2-syntax-10.40-1.fc37.1.noarch 114/137
Verifying : popt-1.19-1.fc38.x86_64 115/137
Verifying : publicsuffix-list-dafsa-20210518-5.fc37.noarch 116/137
Verifying : python3-3.11.0-1.fc38.x86_64 117/137
Verifying : python3-dateutil-1:2.8.2-4.fc37.noarch 118/137
Verifying : python3-distro-1.8.0-1.fc38.noarch 119/137
Verifying : python3-dnf-4.14.0-1.fc38.noarch 120/137
Verifying : python3-gpg-1.17.1-3.fc38.x86_64 121/137
Verifying : python3-hawkey-0.68.0-1.fc38.x86_64 122/137
Verifying : python3-libcomps-0.1.18-4.fc37.x86_64 123/137
Verifying : python3-libdnf-0.68.0-1.fc38.x86_64 124/137
Verifying : python3-libs-3.11.0-1.fc38.x86_64 125/137
Verifying : readline-8.2-2.fc38.x86_64 126/137
Verifying : rpm-sequoia-1.2.0-1.fc38.x86_64 127/137
Verifying : sed-4.8-11.fc37.x86_64 128/137
Verifying : setup-2.14.3-1.fc38.noarch 129/137
Verifying : shadow-utils-2:4.13-3.fc38.x86_64 130/137
Verifying : sqlite-libs-3.40.0-1.fc38.x86_64 131/137
Verifying : systemd-libs-252.2-591.fc38.x86_64 132/137
Verifying : tpm2-tss-3.2.0-3.fc37.x86_64 133/137
Verifying : tzdata-2022f-1.fc38.noarch 134/137
Verifying : xz-libs-5.2.9-1.fc38.x86_64 135/137
Verifying : zchunk-libs-1.2.3-1.fc38.x86_64 136/137
Verifying : zlib-1.2.12-5.fc38.x86_64 137/137
Installed products updated.
Installed:
alternatives-1.21-1.fc38.x86_64
audit-libs-3.0.9-1.fc38.x86_64
basesystem-11-14.fc37.noarch
bash-5.2.9-3.fc38.x86_64
bzip2-libs-1.0.8-12.fc37.x86_64
ca-certificates-2022.2.54-5.fc37.noarch
coreutils-9.1-8.fc38.x86_64
coreutils-common-9.1-8.fc38.x86_64
crypto-policies-20221110-1.git87a75f4.fc38.noarch
curl-7.86.0-4.fc38.x86_64
cyrus-sasl-lib-2.1.28-8.fc38.x86_64
dbus-libs-1:1.14.4-1.fc38.x86_64
dnf-4.14.0-1.fc38.noarch
dnf-data-4.14.0-1.fc38.noarch
dnf-plugins-core-4.3.1-1.fc38.noarch
elfutils-default-yama-scope-0.188-3.fc38.noarch
elfutils-libelf-0.188-3.fc38.x86_64
elfutils-libs-0.188-3.fc38.x86_64
expat-2.5.0-1.fc38.x86_64
fedora-gpg-keys-38-0.3.noarch
fedora-release-38-0.6.noarch
fedora-release-common-38-0.6.noarch
fedora-release-identity-basic-38-0.6.noarch
fedora-repos-38-0.3.noarch
fedora-repos-rawhide-38-0.3.noarch
file-libs-5.42-4.fc37.x86_64
filesystem-3.18-2.fc37.x86_64
findutils-1:4.9.0-2.fc37.x86_64
gawk-5.1.1-4.fc37.x86_64
gdbm-libs-1:1.23-2.fc37.x86_64
glib2-2.74.1-2.fc38.x86_64
glibc-2.36.9000-13.fc38.x86_64
glibc-common-2.36.9000-13.fc38.x86_64
glibc-minimal-langpack-2.36.9000-13.fc38.x86_64
gmp-1:6.2.1-3.fc37.x86_64
gnupg2-2.3.8-1.fc38.x86_64
gnutls-3.7.8-9.fc38.x86_64
gpgme-1.17.1-3.fc38.x86_64
grep-3.8-1.fc38.x86_64
ima-evm-utils-1.4-6.fc37.x86_64
json-c-0.16-3.fc38.x86_64
keyutils-libs-1.6.1-5.fc37.x86_64
krb5-libs-1.20.1-3.fc38.x86_64
libacl-2.3.1-4.fc37.x86_64
libarchive-3.6.1-3.fc38.x86_64
libassuan-2.5.5-5.fc37.x86_64
libattr-2.5.1-5.fc37.x86_64
libb2-0.98.1-7.fc37.x86_64
libblkid-2.38.1-2.fc38.x86_64
libbrotli-1.0.9-10.fc38.x86_64
libcap-2.48-5.fc37.x86_64
libcap-ng-0.8.3-3.fc37.x86_64
libcom_err-1.46.5-3.fc37.x86_64
libcomps-0.1.18-4.fc37.x86_64
libcurl-7.86.0-4.fc38.x86_64
libdnf-0.68.0-1.fc38.x86_64
libevent-2.1.12-7.fc37.x86_64
libffi-3.4.4-1.fc38.x86_64
libfsverity-1.4-8.fc37.x86_64
libgcc-12.2.1-4.fc38.x86_64
libgcrypt-1.10.1-6.fc38.x86_64
libgomp-12.2.1-4.fc38.x86_64
libgpg-error-1.46-1.fc38.x86_64
libidn2-2.3.4-1.fc38.x86_64
libksba-1.6.2-1.fc38.x86_64
libmodulemd-2.14.0-4.fc37.x86_64
libmount-2.38.1-2.fc38.x86_64
libnghttp2-1.51.0-1.fc38.x86_64
libnsl2-2.0.0-4.fc37.x86_64
libpsl-0.21.1-6.fc37.x86_64
librepo-1.14.4-1.fc38.x86_64
libreport-filesystem-2.17.6-1.fc38.noarch
libselinux-3.4-6.fc38.x86_64
libsemanage-3.4-6.fc38.x86_64
libsepol-3.4-4.fc38.x86_64
libsigsegv-2.14-3.fc37.x86_64
libsmartcols-2.38.1-2.fc38.x86_64
libsolv-0.7.22-3.fc37.x86_64
libssh-0.10.4-2.fc38.x86_64
libssh-config-0.10.4-2.fc38.noarch
libstdc++-12.2.1-4.fc38.x86_64
libtasn1-4.19.0-1.fc38.x86_64
libtirpc-1.3.3-0.fc37.x86_64
libunistring-1.0-2.fc37.x86_64
libuuid-2.38.1-2.fc38.x86_64
libverto-0.3.2-4.fc37.x86_64
libxcrypt-4.4.33-3.fc38.x86_64
libxml2-2.10.3-2.fc38.x86_64
libyaml-0.2.5-8.fc37.x86_64
libzstd-1.5.2-3.fc37.x86_64
lua-libs-5.4.4-6.fc38.x86_64
lz4-libs-1.9.3-5.fc37.x86_64
mpdecimal-2.5.1-4.fc37.x86_64
mpfr-4.1.1-2.fc38.x86_64
ncurses-base-6.3-4.20221126.fc38.noarch
ncurses-libs-6.3-4.20221126.fc38.x86_64
nettle-3.8-2.fc37.x86_64
npth-1.6-10.fc38.x86_64
openldap-2.6.3-1.fc38.x86_64
openssl-libs-1:3.0.5-6.fc38.x86_64
p11-kit-0.24.1-3.fc37.x86_64
p11-kit-trust-0.24.1-3.fc37.x86_64
pcre2-10.40-1.fc37.1.x86_64
pcre2-syntax-10.40-1.fc37.1.noarch
popt-1.19-1.fc38.x86_64
publicsuffix-list-dafsa-20210518-5.fc37.noarch
python-pip-wheel-22.3.1-1.fc38.noarch
python-setuptools-wheel-65.5.1-1.fc38.noarch
python3-3.11.0-1.fc38.x86_64
python3-dateutil-1:2.8.2-4.fc37.noarch
python3-dbus-1.3.2-1.fc38.x86_64
python3-distro-1.8.0-1.fc38.noarch
python3-dnf-4.14.0-1.fc38.noarch
python3-dnf-plugins-core-4.3.1-1.fc38.noarch
python3-gpg-1.17.1-3.fc38.x86_64
python3-hawkey-0.68.0-1.fc38.x86_64
python3-libcomps-0.1.18-4.fc37.x86_64
python3-libdnf-0.68.0-1.fc38.x86_64
python3-libs-3.11.0-1.fc38.x86_64
python3-rpm-4.18.0-8.fc38.x86_64
python3-six-1.16.0-8.fc37.noarch
readline-8.2-2.fc38.x86_64
rpm-4.18.0-8.fc38.x86_64
rpm-build-libs-4.18.0-8.fc38.x86_64
rpm-libs-4.18.0-8.fc38.x86_64
rpm-sequoia-1.2.0-1.fc38.x86_64
rpm-sign-libs-4.18.0-8.fc38.x86_64
sed-4.8-11.fc37.x86_64
setup-2.14.3-1.fc38.noarch
shadow-utils-2:4.13-3.fc38.x86_64
sqlite-libs-3.40.0-1.fc38.x86_64
systemd-libs-252.2-591.fc38.x86_64
tpm2-tss-3.2.0-3.fc37.x86_64
tzdata-2022f-1.fc38.noarch
xz-libs-5.2.9-1.fc38.x86_64
zchunk-libs-1.2.3-1.fc38.x86_64
zlib-1.2.12-5.fc38.x86_64
Complete!
Finish(bootstrap): dnf install
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1670526512.550555/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 3.5
INFO: Mock Version: 3.5
Start: dnf install
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 114 MB/s | 14 MB 00:00
fedora 42 MB/s | 65 MB 00:01
Last metadata expiration check: 0:00:02 ago on Thu Dec 8 19:09:13 2022.
Dependencies resolved.
================================================================================
Package Arch Version Repo Size
================================================================================
Installing group/module packages:
bash x86_64 5.2.9-3.fc38 fedora 1.8 M
bzip2 x86_64 1.0.8-12.fc37 fedora 52 k
coreutils x86_64 9.1-8.fc38 fedora 1.1 M
cpio x86_64 2.13-13.fc38 fedora 276 k
diffutils x86_64 3.8-3.fc37 fedora 378 k
fedora-release-common noarch 38-0.6 fedora 21 k
findutils x86_64 1:4.9.0-2.fc37 fedora 492 k
gawk x86_64 5.1.1-4.fc37 fedora 1.0 M
glibc-minimal-langpack x86_64 2.36.9000-13.fc38 fedora 25 k
grep x86_64 3.8-1.fc38 fedora 292 k
gzip x86_64 1.12-2.fc37 fedora 166 k
info x86_64 7.0.1-1.fc38 fedora 181 k
patch x86_64 2.7.6-17.fc37 fedora 124 k
redhat-rpm-config noarch 233-1.fc38 fedora 81 k
rpm-build x86_64 4.18.0-8.fc38 copr_base 70 k
sed x86_64 4.8-11.fc37 fedora 306 k
shadow-utils x86_64 2:4.13-3.fc38 fedora 1.3 M
tar x86_64 2:1.34-5.fc38 fedora 885 k
unzip x86_64 6.0-58.fc38 fedora 182 k
util-linux x86_64 2.38.1-2.fc38 copr_base 2.3 M
which x86_64 2.21-36.fc38 fedora 41 k
xz x86_64 5.2.9-1.fc38 fedora 306 k
Installing dependencies:
alternatives x86_64 1.21-1.fc38 fedora 38 k
ansible-srpm-macros noarch 1-8.1.fc38 fedora 8.6 k
audit-libs x86_64 3.0.9-1.fc38 copr_base 117 k
authselect x86_64 1.4.2-1.fc38 fedora 144 k
authselect-libs x86_64 1.4.2-1.fc38 fedora 250 k
basesystem noarch 11-14.fc37 fedora 7.0 k
binutils x86_64 2.39-5.fc38 fedora 5.4 M
binutils-gold x86_64 2.39-5.fc38 fedora 777 k
bzip2-libs x86_64 1.0.8-12.fc37 fedora 41 k
ca-certificates noarch 2022.2.54-5.fc37 fedora 829 k
coreutils-common x86_64 9.1-8.fc38 fedora 2.0 M
cracklib x86_64 2.9.7-30.fc38 fedora 92 k
crypto-policies noarch 20221110-1.git87a75f4.fc38 fedora 90 k
curl x86_64 7.86.0-4.fc38 fedora 335 k
cyrus-sasl-lib x86_64 2.1.28-8.fc38 fedora 792 k
debugedit x86_64 5.0-5.fc37 fedora 77 k
dwz x86_64 0.15-1.fc38 fedora 136 k
ed x86_64 1.18-2.fc37 fedora 78 k
efi-srpm-macros noarch 5-6.fc37 fedora 22 k
elfutils x86_64 0.188-3.fc38 fedora 529 k
elfutils-debuginfod-client x86_64 0.188-3.fc38 fedora 40 k
elfutils-default-yama-scope noarch 0.188-3.fc38 fedora 15 k
elfutils-libelf x86_64 0.188-3.fc38 fedora 196 k
elfutils-libs x86_64 0.188-3.fc38 fedora 257 k
fedora-gpg-keys noarch 38-0.3 fedora 125 k
fedora-release noarch 38-0.6 fedora 11 k
fedora-release-identity-basic
noarch 38-0.6 fedora 11 k
fedora-repos noarch 38-0.3 fedora 10 k
fedora-repos-rawhide noarch 38-0.3 fedora 9.7 k
file x86_64 5.42-4.fc37 fedora 49 k
file-libs x86_64 5.42-4.fc37 fedora 676 k
filesystem x86_64 3.18-2.fc37 fedora 1.1 M
fonts-srpm-macros noarch 1:2.0.5-9.fc38 fedora 26 k
fpc-srpm-macros noarch 1.3-6.fc37 fedora 7.7 k
gdb-minimal x86_64 12.1-9.fc38 fedora 3.7 M
gdbm-libs x86_64 1:1.23-2.fc37 fedora 56 k
ghc-srpm-macros noarch 1.5.0-7.fc37 fedora 7.8 k
glibc x86_64 2.36.9000-13.fc38 fedora 2.1 M
glibc-common x86_64 2.36.9000-13.fc38 fedora 304 k
glibc-gconv-extra x86_64 2.36.9000-13.fc38 fedora 1.6 M
gmp x86_64 1:6.2.1-3.fc37 fedora 315 k
gnat-srpm-macros noarch 4-16.fc37 fedora 8.3 k
go-srpm-macros noarch 3.2.0-1.fc38 fedora 27 k
jansson x86_64 2.13.1-5.fc37 fedora 44 k
kernel-srpm-macros noarch 1.0-15.fc37 fedora 9.4 k
keyutils-libs x86_64 1.6.1-5.fc37 fedora 31 k
krb5-libs x86_64 1.20.1-3.fc38 fedora 723 k
libacl x86_64 2.3.1-4.fc37 fedora 23 k
libarchive x86_64 3.6.1-3.fc38 fedora 397 k
libattr x86_64 2.5.1-5.fc37 fedora 18 k
libblkid x86_64 2.38.1-2.fc38 copr_base 107 k
libbrotli x86_64 1.0.9-10.fc38 copr_base 315 k
libcap x86_64 2.48-5.fc37 fedora 67 k
libcap-ng x86_64 0.8.3-3.fc37 fedora 33 k
libcom_err x86_64 1.46.5-3.fc37 fedora 25 k
libcurl x86_64 7.86.0-4.fc38 fedora 305 k
libdb x86_64 5.3.28-53.fc37 fedora 760 k
libeconf x86_64 0.4.0-4.fc37 fedora 27 k
libevent x86_64 2.1.12-7.fc37 fedora 261 k
libfdisk x86_64 2.38.1-2.fc38 copr_base 161 k
libffi x86_64 3.4.4-1.fc38 fedora 38 k
libgcc x86_64 12.2.1-4.fc38 fedora 108 k
libgomp x86_64 12.2.1-4.fc38 fedora 296 k
libidn2 x86_64 2.3.4-1.fc38 fedora 160 k
libmount x86_64 2.38.1-2.fc38 copr_base 135 k
libnghttp2 x86_64 1.51.0-1.fc38 fedora 75 k
libnsl2 x86_64 2.0.0-4.fc37 fedora 30 k
libpkgconf x86_64 1.8.0-3.fc37 fedora 36 k
libpsl x86_64 0.21.1-6.fc37 fedora 63 k
libpwquality x86_64 1.4.4-11.fc37 fedora 116 k
libselinux x86_64 3.4-6.fc38 fedora 86 k
libsemanage x86_64 3.4-6.fc38 fedora 120 k
libsepol x86_64 3.4-4.fc38 fedora 322 k
libsigsegv x86_64 2.14-3.fc37 fedora 27 k
libsmartcols x86_64 2.38.1-2.fc38 copr_base 65 k
libssh x86_64 0.10.4-2.fc38 fedora 209 k
libssh-config noarch 0.10.4-2.fc38 fedora 8.8 k
libstdc++ x86_64 12.2.1-4.fc38 fedora 800 k
libtasn1 x86_64 4.19.0-1.fc38 fedora 75 k
libtirpc x86_64 1.3.3-0.fc37 fedora 93 k
libunistring x86_64 1.0-2.fc37 fedora 549 k
libutempter x86_64 1.2.1-7.fc37 fedora 26 k
libuuid x86_64 2.38.1-2.fc38 copr_base 28 k
libverto x86_64 0.3.2-4.fc37 fedora 21 k
libxcrypt x86_64 4.4.33-3.fc38 fedora 120 k
libxml2 x86_64 2.10.3-2.fc38 copr_base 705 k
libzstd x86_64 1.5.2-3.fc37 fedora 294 k
lua-libs x86_64 5.4.4-6.fc38 fedora 131 k
lua-srpm-macros noarch 1-7.fc37 fedora 8.8 k
lz4-libs x86_64 1.9.3-5.fc37 fedora 70 k
mpfr x86_64 4.1.1-2.fc38 fedora 598 k
ncurses-base noarch 6.3-4.20221126.fc38 fedora 86 k
ncurses-libs x86_64 6.3-4.20221126.fc38 fedora 335 k
nettle x86_64 3.8-2.fc37 fedora 414 k
nim-srpm-macros noarch 3-7.fc37 fedora 8.4 k
ocaml-srpm-macros noarch 7-2.fc37 fedora 13 k
openblas-srpm-macros noarch 2-12.fc37 fedora 7.5 k
openldap x86_64 2.6.3-1.fc38 fedora 254 k
openssl-libs x86_64 1:3.0.5-6.fc38 fedora 2.1 M
p11-kit x86_64 0.24.1-3.fc37 fedora 376 k
p11-kit-trust x86_64 0.24.1-3.fc37 fedora 138 k
package-notes-srpm-macros noarch 0.5-6.fc38 fedora 11 k
pam x86_64 1.5.2-14.fc37 fedora 560 k
pam-libs x86_64 1.5.2-14.fc37 fedora 58 k
pcre2 x86_64 10.40-1.fc37.1 fedora 236 k
pcre2-syntax noarch 10.40-1.fc37.1 fedora 142 k
perl-srpm-macros noarch 1-47.fc38 fedora 8.2 k
pkgconf x86_64 1.8.0-3.fc37 fedora 41 k
pkgconf-m4 noarch 1.8.0-3.fc37 fedora 14 k
pkgconf-pkg-config x86_64 1.8.0-3.fc37 fedora 10 k
popt x86_64 1.19-1.fc38 fedora 66 k
publicsuffix-list-dafsa noarch 20210518-5.fc37 fedora 58 k
python-srpm-macros noarch 3.11-5.fc38 fedora 24 k
qt5-srpm-macros noarch 5.15.7-1.fc38 fedora 7.9 k
readline x86_64 8.2-2.fc38 fedora 211 k
rpm x86_64 4.18.0-8.fc38 copr_base 544 k
rpm-build-libs x86_64 4.18.0-8.fc38 copr_base 95 k
rpm-libs x86_64 4.18.0-8.fc38 copr_base 310 k
rpm-sequoia x86_64 1.2.0-1.fc38 fedora 829 k
rpmautospec-rpm-macros noarch 0.3.1-1.fc38 copr_base 9.3 k
rust-srpm-macros noarch 23-1.fc38 fedora 9.4 k
setup noarch 2.14.3-1.fc38 fedora 152 k
sqlite-libs x86_64 3.40.0-1.fc38 fedora 661 k
systemd-libs x86_64 252.2-591.fc38 fedora 632 k
tzdata noarch 2022f-1.fc38 fedora 715 k
util-linux-core x86_64 2.38.1-2.fc38 copr_base 456 k
xxhash-libs x86_64 0.8.1-3.fc37 fedora 41 k
xz-libs x86_64 5.2.9-1.fc38 fedora 93 k
zip x86_64 3.0-35.fc38 fedora 259 k
zlib x86_64 1.2.12-5.fc38 fedora 94 k
zstd x86_64 1.5.2-3.fc37 fedora 447 k
Installing Groups:
Buildsystem building group
Transaction Summary
================================================================================
Install 153 Packages
Total download size: 52 M
Installed size: 181 M
Downloading Packages:
(1/153): audit-libs-3.0.9-1.fc38.x86_64.rpm 1.9 MB/s | 117 kB 00:00
(2/153): libblkid-2.38.1-2.fc38.x86_64.rpm 1.7 MB/s | 107 kB 00:00
(3/153): libmount-2.38.1-2.fc38.x86_64.rpm 46 MB/s | 135 kB 00:00
(4/153): libbrotli-1.0.9-10.fc38.x86_64.rpm 4.7 MB/s | 315 kB 00:00
(5/153): libsmartcols-2.38.1-2.fc38.x86_64.rpm 29 MB/s | 65 kB 00:00
(6/153): libfdisk-2.38.1-2.fc38.x86_64.rpm 24 MB/s | 161 kB 00:00
(7/153): libuuid-2.38.1-2.fc38.x86_64.rpm 11 MB/s | 28 kB 00:00
(8/153): libxml2-2.10.3-2.fc38.x86_64.rpm 114 MB/s | 705 kB 00:00
(9/153): rpm-4.18.0-8.fc38.x86_64.rpm 77 MB/s | 544 kB 00:00
(10/153): rpm-build-4.18.0-8.fc38.x86_64.rpm 10 MB/s | 70 kB 00:00
(11/153): rpm-build-libs-4.18.0-8.fc38.x86_64.r 43 MB/s | 95 kB 00:00
(12/153): rpm-libs-4.18.0-8.fc38.x86_64.rpm 79 MB/s | 310 kB 00:00
(13/153): rpmautospec-rpm-macros-0.3.1-1.fc38.n 2.1 MB/s | 9.3 kB 00:00
(14/153): util-linux-core-2.38.1-2.fc38.x86_64. 17 MB/s | 456 kB 00:00
(15/153): util-linux-2.38.1-2.fc38.x86_64.rpm 65 MB/s | 2.3 MB 00:00
(16/153): alternatives-1.21-1.fc38.x86_64.rpm 1.2 MB/s | 38 kB 00:00
(17/153): ansible-srpm-macros-1-8.1.fc38.noarch 2.2 MB/s | 8.6 kB 00:00
(18/153): basesystem-11-14.fc37.noarch.rpm 6.8 MB/s | 7.0 kB 00:00
(19/153): authselect-1.4.2-1.fc38.x86_64.rpm 48 MB/s | 144 kB 00:00
(20/153): authselect-libs-1.4.2-1.fc38.x86_64.r 48 MB/s | 250 kB 00:00
(21/153): bash-5.2.9-3.fc38.x86_64.rpm 74 MB/s | 1.8 MB 00:00
(22/153): binutils-gold-2.39-5.fc38.x86_64.rpm 29 MB/s | 777 kB 00:00
(23/153): bzip2-1.0.8-12.fc37.x86_64.rpm 7.7 MB/s | 52 kB 00:00
(24/153): bzip2-libs-1.0.8-12.fc37.x86_64.rpm 10 MB/s | 41 kB 00:00
(25/153): ca-certificates-2022.2.54-5.fc37.noar 77 MB/s | 829 kB 00:00
(26/153): coreutils-9.1-8.fc38.x86_64.rpm 73 MB/s | 1.1 MB 00:00
(27/153): binutils-2.39-5.fc38.x86_64.rpm 83 MB/s | 5.4 MB 00:00
(28/153): cpio-2.13-13.fc38.x86_64.rpm 14 MB/s | 276 kB 00:00
(29/153): coreutils-common-9.1-8.fc38.x86_64.rp 69 MB/s | 2.0 MB 00:00
(30/153): cracklib-2.9.7-30.fc38.x86_64.rpm 17 MB/s | 92 kB 00:00
(31/153): crypto-policies-20221110-1.git87a75f4 25 MB/s | 90 kB 00:00
(32/153): curl-7.86.0-4.fc38.x86_64.rpm 107 MB/s | 335 kB 00:00
(33/153): cyrus-sasl-lib-2.1.28-8.fc38.x86_64.r 133 MB/s | 792 kB 00:00
(34/153): debugedit-5.0-5.fc37.x86_64.rpm 13 MB/s | 77 kB 00:00
(35/153): diffutils-3.8-3.fc37.x86_64.rpm 29 MB/s | 378 kB 00:00
(36/153): dwz-0.15-1.fc38.x86_64.rpm 11 MB/s | 136 kB 00:00
(37/153): ed-1.18-2.fc37.x86_64.rpm 6.1 MB/s | 78 kB 00:00
(38/153): efi-srpm-macros-5-6.fc37.noarch.rpm 11 MB/s | 22 kB 00:00
(39/153): elfutils-debuginfod-client-0.188-3.fc 37 MB/s | 40 kB 00:00
(40/153): elfutils-0.188-3.fc38.x86_64.rpm 140 MB/s | 529 kB 00:00
(41/153): elfutils-default-yama-scope-0.188-3.f 5.1 MB/s | 15 kB 00:00
(42/153): elfutils-libelf-0.188-3.fc38.x86_64.r 63 MB/s | 196 kB 00:00
(43/153): fedora-gpg-keys-38-0.3.noarch.rpm 54 MB/s | 125 kB 00:00
(44/153): elfutils-libs-0.188-3.fc38.x86_64.rpm 62 MB/s | 257 kB 00:00
(45/153): fedora-release-38-0.6.noarch.rpm 5.8 MB/s | 11 kB 00:00
(46/153): fedora-release-common-38-0.6.noarch.r 14 MB/s | 21 kB 00:00
(47/153): fedora-release-identity-basic-38-0.6. 11 MB/s | 11 kB 00:00
(48/153): fedora-repos-38-0.3.noarch.rpm 6.4 MB/s | 10 kB 00:00
(49/153): fedora-repos-rawhide-38-0.3.noarch.rp 6.1 MB/s | 9.7 kB 00:00
(50/153): file-5.42-4.fc37.x86_64.rpm 28 MB/s | 49 kB 00:00
(51/153): file-libs-5.42-4.fc37.x86_64.rpm 83 MB/s | 676 kB 00:00
(52/153): filesystem-3.18-2.fc37.x86_64.rpm 109 MB/s | 1.1 MB 00:00
(53/153): findutils-4.9.0-2.fc37.x86_64.rpm 50 MB/s | 492 kB 00:00
(54/153): fonts-srpm-macros-2.0.5-9.fc38.noarch 8.6 MB/s | 26 kB 00:00
(55/153): fpc-srpm-macros-1.3-6.fc37.noarch.rpm 6.4 MB/s | 7.7 kB 00:00
(56/153): gawk-5.1.1-4.fc37.x86_64.rpm 141 MB/s | 1.0 MB 00:00
(57/153): gdbm-libs-1.23-2.fc37.x86_64.rpm 9.1 MB/s | 56 kB 00:00
(58/153): ghc-srpm-macros-1.5.0-7.fc37.noarch.r 1.6 MB/s | 7.8 kB 00:00
(59/153): gdb-minimal-12.1-9.fc38.x86_64.rpm 186 MB/s | 3.7 MB 00:00
(60/153): glibc-common-2.36.9000-13.fc38.x86_64 35 MB/s | 304 kB 00:00
(61/153): glibc-2.36.9000-13.fc38.x86_64.rpm 99 MB/s | 2.1 MB 00:00
(62/153): glibc-gconv-extra-2.36.9000-13.fc38.x 130 MB/s | 1.6 MB 00:00
(63/153): glibc-minimal-langpack-2.36.9000-13.f 4.3 MB/s | 25 kB 00:00
(64/153): gmp-6.2.1-3.fc37.x86_64.rpm 77 MB/s | 315 kB 00:00
(65/153): gnat-srpm-macros-4-16.fc37.noarch.rpm 7.1 MB/s | 8.3 kB 00:00
(66/153): go-srpm-macros-3.2.0-1.fc38.noarch.rp 15 MB/s | 27 kB 00:00
(67/153): grep-3.8-1.fc38.x86_64.rpm 135 MB/s | 292 kB 00:00
(68/153): gzip-1.12-2.fc37.x86_64.rpm 61 MB/s | 166 kB 00:00
(69/153): info-7.0.1-1.fc38.x86_64.rpm 68 MB/s | 181 kB 00:00
(70/153): jansson-2.13.1-5.fc37.x86_64.rpm 22 MB/s | 44 kB 00:00
(71/153): kernel-srpm-macros-1.0-15.fc37.noarch 6.1 MB/s | 9.4 kB 00:00
(72/153): keyutils-libs-1.6.1-5.fc37.x86_64.rpm 19 MB/s | 31 kB 00:00
(73/153): krb5-libs-1.20.1-3.fc38.x86_64.rpm 186 MB/s | 723 kB 00:00
(74/153): libacl-2.3.1-4.fc37.x86_64.rpm 4.8 MB/s | 23 kB 00:00
(75/153): libarchive-3.6.1-3.fc38.x86_64.rpm 115 MB/s | 397 kB 00:00
(76/153): libattr-2.5.1-5.fc37.x86_64.rpm 8.5 MB/s | 18 kB 00:00
(77/153): libcap-2.48-5.fc37.x86_64.rpm 38 MB/s | 67 kB 00:00
(78/153): libcap-ng-0.8.3-3.fc37.x86_64.rpm 26 MB/s | 33 kB 00:00
(79/153): libcom_err-1.46.5-3.fc37.x86_64.rpm 15 MB/s | 25 kB 00:00
(80/153): libcurl-7.86.0-4.fc38.x86_64.rpm 101 MB/s | 305 kB 00:00
(81/153): libdb-5.3.28-53.fc37.x86_64.rpm 132 MB/s | 760 kB 00:00
(82/153): libeconf-0.4.0-4.fc37.x86_64.rpm 6.6 MB/s | 27 kB 00:00
(83/153): libevent-2.1.12-7.fc37.x86_64.rpm 74 MB/s | 261 kB 00:00
(84/153): libffi-3.4.4-1.fc38.x86_64.rpm 27 MB/s | 38 kB 00:00
(85/153): libgcc-12.2.1-4.fc38.x86_64.rpm 38 MB/s | 108 kB 00:00
(86/153): libgomp-12.2.1-4.fc38.x86_64.rpm 109 MB/s | 296 kB 00:00
(87/153): libidn2-2.3.4-1.fc38.x86_64.rpm 81 MB/s | 160 kB 00:00
(88/153): libnghttp2-1.51.0-1.fc38.x86_64.rpm 54 MB/s | 75 kB 00:00
(89/153): libnsl2-2.0.0-4.fc37.x86_64.rpm 15 MB/s | 30 kB 00:00
(90/153): libpkgconf-1.8.0-3.fc37.x86_64.rpm 20 MB/s | 36 kB 00:00
(91/153): libpsl-0.21.1-6.fc37.x86_64.rpm 44 MB/s | 63 kB 00:00
(92/153): libselinux-3.4-6.fc38.x86_64.rpm 57 MB/s | 86 kB 00:00
(93/153): libsemanage-3.4-6.fc38.x86_64.rpm 58 MB/s | 120 kB 00:00
(94/153): libpwquality-1.4.4-11.fc37.x86_64.rpm 31 MB/s | 116 kB 00:00
(95/153): libsepol-3.4-4.fc38.x86_64.rpm 100 MB/s | 322 kB 00:00
(96/153): libsigsegv-2.14-3.fc37.x86_64.rpm 11 MB/s | 27 kB 00:00
(97/153): libssh-0.10.4-2.fc38.x86_64.rpm 86 MB/s | 209 kB 00:00
(98/153): libssh-config-0.10.4-2.fc38.noarch.rp 4.3 MB/s | 8.8 kB 00:00
(99/153): libstdc++-12.2.1-4.fc38.x86_64.rpm 127 MB/s | 800 kB 00:00
(100/153): libtasn1-4.19.0-1.fc38.x86_64.rpm 13 MB/s | 75 kB 00:00
(101/153): libtirpc-1.3.3-0.fc37.x86_64.rpm 16 MB/s | 93 kB 00:00
(102/153): libunistring-1.0-2.fc37.x86_64.rpm 111 MB/s | 549 kB 00:00
(103/153): libverto-0.3.2-4.fc37.x86_64.rpm 4.5 MB/s | 21 kB 00:00
(104/153): libutempter-1.2.1-7.fc37.x86_64.rpm 4.3 MB/s | 26 kB 00:00
(105/153): libxcrypt-4.4.33-3.fc38.x86_64.rpm 23 MB/s | 120 kB 00:00
(106/153): libzstd-1.5.2-3.fc37.x86_64.rpm 43 MB/s | 294 kB 00:00
(107/153): lua-libs-5.4.4-6.fc38.x86_64.rpm 20 MB/s | 131 kB 00:00
(108/153): lua-srpm-macros-1-7.fc37.noarch.rpm 3.6 MB/s | 8.8 kB 00:00
(109/153): lz4-libs-1.9.3-5.fc37.x86_64.rpm 30 MB/s | 70 kB 00:00
(110/153): mpfr-4.1.1-2.fc38.x86_64.rpm 125 MB/s | 598 kB 00:00
(111/153): ncurses-base-6.3-4.20221126.fc38.noa 21 MB/s | 86 kB 00:00
(112/153): ncurses-libs-6.3-4.20221126.fc38.x86 119 MB/s | 335 kB 00:00
(113/153): nettle-3.8-2.fc37.x86_64.rpm 167 MB/s | 414 kB 00:00
(114/153): nim-srpm-macros-3-7.fc37.noarch.rpm 2.8 MB/s | 8.4 kB 00:00
(115/153): ocaml-srpm-macros-7-2.fc37.noarch.rp 7.7 MB/s | 13 kB 00:00
(116/153): openblas-srpm-macros-2-12.fc37.noarc 5.8 MB/s | 7.5 kB 00:00
(117/153): openldap-2.6.3-1.fc38.x86_64.rpm 113 MB/s | 254 kB 00:00
(118/153): openssl-libs-3.0.5-6.fc38.x86_64.rpm 265 MB/s | 2.1 MB 00:00
(119/153): p11-kit-0.24.1-3.fc37.x86_64.rpm 39 MB/s | 376 kB 00:00
(120/153): p11-kit-trust-0.24.1-3.fc37.x86_64.r 24 MB/s | 138 kB 00:00
(121/153): package-notes-srpm-macros-0.5-6.fc38 5.6 MB/s | 11 kB 00:00
(122/153): pam-libs-1.5.2-14.fc37.x86_64.rpm 44 MB/s | 58 kB 00:00
(123/153): patch-2.7.6-17.fc37.x86_64.rpm 45 MB/s | 124 kB 00:00
(124/153): pam-1.5.2-14.fc37.x86_64.rpm 114 MB/s | 560 kB 00:00
(125/153): pcre2-10.40-1.fc37.1.x86_64.rpm 68 MB/s | 236 kB 00:00
(126/153): pcre2-syntax-10.40-1.fc37.1.noarch.r 59 MB/s | 142 kB 00:00
(127/153): perl-srpm-macros-1-47.fc38.noarch.rp 8.0 MB/s | 8.2 kB 00:00
(128/153): pkgconf-1.8.0-3.fc37.x86_64.rpm 25 MB/s | 41 kB 00:00
(129/153): pkgconf-m4-1.8.0-3.fc37.noarch.rpm 9.5 MB/s | 14 kB 00:00
(130/153): pkgconf-pkg-config-1.8.0-3.fc37.x86_ 7.6 MB/s | 10 kB 00:00
(131/153): popt-1.19-1.fc38.x86_64.rpm 42 MB/s | 66 kB 00:00
(132/153): publicsuffix-list-dafsa-20210518-5.f 41 MB/s | 58 kB 00:00
(133/153): python-srpm-macros-3.11-5.fc38.noarc 18 MB/s | 24 kB 00:00
(134/153): readline-8.2-2.fc38.x86_64.rpm 153 MB/s | 211 kB 00:00
(135/153): qt5-srpm-macros-5.15.7-1.fc38.noarch 3.6 MB/s | 7.9 kB 00:00
(136/153): redhat-rpm-config-233-1.fc38.noarch. 39 MB/s | 81 kB 00:00
(137/153): rpm-sequoia-1.2.0-1.fc38.x86_64.rpm 227 MB/s | 829 kB 00:00
(138/153): sed-4.8-11.fc37.x86_64.rpm 121 MB/s | 306 kB 00:00
(139/153): rust-srpm-macros-23-1.fc38.noarch.rp 2.7 MB/s | 9.4 kB 00:00
(140/153): setup-2.14.3-1.fc38.noarch.rpm 81 MB/s | 152 kB 00:00
(141/153): shadow-utils-4.13-3.fc38.x86_64.rpm 260 MB/s | 1.3 MB 00:00
(142/153): sqlite-libs-3.40.0-1.fc38.x86_64.rpm 127 MB/s | 661 kB 00:00
(143/153): systemd-libs-252.2-591.fc38.x86_64.r 100 MB/s | 632 kB 00:00
(144/153): tzdata-2022f-1.fc38.noarch.rpm 158 MB/s | 715 kB 00:00
(145/153): tar-1.34-5.fc38.x86_64.rpm 94 MB/s | 885 kB 00:00
(146/153): unzip-6.0-58.fc38.x86_64.rpm 23 MB/s | 182 kB 00:00
(147/153): which-2.21-36.fc38.x86_64.rpm 14 MB/s | 41 kB 00:00
(148/153): xxhash-libs-0.8.1-3.fc37.x86_64.rpm 21 MB/s | 41 kB 00:00
(149/153): xz-libs-5.2.9-1.fc38.x86_64.rpm 62 MB/s | 93 kB 00:00
(150/153): xz-5.2.9-1.fc38.x86_64.rpm 77 MB/s | 306 kB 00:00
(151/153): zlib-1.2.12-5.fc38.x86_64.rpm 31 MB/s | 94 kB 00:00
(152/153): zip-3.0-35.fc38.x86_64.rpm 40 MB/s | 259 kB 00:00
(153/153): zstd-1.5.2-3.fc37.x86_64.rpm 85 MB/s | 447 kB 00:00
--------------------------------------------------------------------------------
Total 109 MB/s | 52 MB 00:00
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0xEB10B464:
Userid : "Fedora (38) <fedora-38-primary@fedoraproject.org>"
Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary
Key imported successfully
fedora 1.6 MB/s | 1.6 kB 00:00
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary (0xEB10B464) is already installed
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0x5323552A:
Userid : "Fedora (37) <fedora-37-primary@fedoraproject.org>"
Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Running scriptlet: filesystem-3.18-2.fc37.x86_64 1/1
Preparing : 1/1
Installing : libgcc-12.2.1-4.fc38.x86_64 1/153
Running scriptlet: libgcc-12.2.1-4.fc38.x86_64 1/153
Installing : crypto-policies-20221110-1.git87a75f4.fc38.noarc 2/153
Running scriptlet: crypto-policies-20221110-1.git87a75f4.fc38.noarc 2/153
Installing : fedora-release-identity-basic-38-0.6.noarch 3/153
Installing : tzdata-2022f-1.fc38.noarch 4/153
Installing : rust-srpm-macros-23-1.fc38.noarch 5/153
Installing : qt5-srpm-macros-5.15.7-1.fc38.noarch 6/153
Installing : publicsuffix-list-dafsa-20210518-5.fc37.noarch 7/153
Installing : pkgconf-m4-1.8.0-3.fc37.noarch 8/153
Installing : perl-srpm-macros-1-47.fc38.noarch 9/153
Installing : pcre2-syntax-10.40-1.fc37.1.noarch 10/153
Installing : package-notes-srpm-macros-0.5-6.fc38.noarch 11/153
Installing : openblas-srpm-macros-2-12.fc37.noarch 12/153
Installing : ocaml-srpm-macros-7-2.fc37.noarch 13/153
Installing : nim-srpm-macros-3-7.fc37.noarch 14/153
Installing : ncurses-base-6.3-4.20221126.fc38.noarch 15/153
Installing : libssh-config-0.10.4-2.fc38.noarch 16/153
Installing : kernel-srpm-macros-1.0-15.fc37.noarch 17/153
Installing : gnat-srpm-macros-4-16.fc37.noarch 18/153
Installing : ghc-srpm-macros-1.5.0-7.fc37.noarch 19/153
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Verifying : zlib-1.2.12-5.fc38.x86_64 152/153
Verifying : zstd-1.5.2-3.fc37.x86_64 153/153
Installed:
alternatives-1.21-1.fc38.x86_64
ansible-srpm-macros-1-8.1.fc38.noarch
audit-libs-3.0.9-1.fc38.x86_64
authselect-1.4.2-1.fc38.x86_64
authselect-libs-1.4.2-1.fc38.x86_64
basesystem-11-14.fc37.noarch
bash-5.2.9-3.fc38.x86_64
binutils-2.39-5.fc38.x86_64
binutils-gold-2.39-5.fc38.x86_64
bzip2-1.0.8-12.fc37.x86_64
bzip2-libs-1.0.8-12.fc37.x86_64
ca-certificates-2022.2.54-5.fc37.noarch
coreutils-9.1-8.fc38.x86_64
coreutils-common-9.1-8.fc38.x86_64
cpio-2.13-13.fc38.x86_64
cracklib-2.9.7-30.fc38.x86_64
crypto-policies-20221110-1.git87a75f4.fc38.noarch
curl-7.86.0-4.fc38.x86_64
cyrus-sasl-lib-2.1.28-8.fc38.x86_64
debugedit-5.0-5.fc37.x86_64
diffutils-3.8-3.fc37.x86_64
dwz-0.15-1.fc38.x86_64
ed-1.18-2.fc37.x86_64
efi-srpm-macros-5-6.fc37.noarch
elfutils-0.188-3.fc38.x86_64
elfutils-debuginfod-client-0.188-3.fc38.x86_64
elfutils-default-yama-scope-0.188-3.fc38.noarch
elfutils-libelf-0.188-3.fc38.x86_64
elfutils-libs-0.188-3.fc38.x86_64
fedora-gpg-keys-38-0.3.noarch
fedora-release-38-0.6.noarch
fedora-release-common-38-0.6.noarch
fedora-release-identity-basic-38-0.6.noarch
fedora-repos-38-0.3.noarch
fedora-repos-rawhide-38-0.3.noarch
file-5.42-4.fc37.x86_64
file-libs-5.42-4.fc37.x86_64
filesystem-3.18-2.fc37.x86_64
findutils-1:4.9.0-2.fc37.x86_64
fonts-srpm-macros-1:2.0.5-9.fc38.noarch
fpc-srpm-macros-1.3-6.fc37.noarch
gawk-5.1.1-4.fc37.x86_64
gdb-minimal-12.1-9.fc38.x86_64
gdbm-libs-1:1.23-2.fc37.x86_64
ghc-srpm-macros-1.5.0-7.fc37.noarch
glibc-2.36.9000-13.fc38.x86_64
glibc-common-2.36.9000-13.fc38.x86_64
glibc-gconv-extra-2.36.9000-13.fc38.x86_64
glibc-minimal-langpack-2.36.9000-13.fc38.x86_64
gmp-1:6.2.1-3.fc37.x86_64
gnat-srpm-macros-4-16.fc37.noarch
go-srpm-macros-3.2.0-1.fc38.noarch
grep-3.8-1.fc38.x86_64
gzip-1.12-2.fc37.x86_64
info-7.0.1-1.fc38.x86_64
jansson-2.13.1-5.fc37.x86_64
kernel-srpm-macros-1.0-15.fc37.noarch
keyutils-libs-1.6.1-5.fc37.x86_64
krb5-libs-1.20.1-3.fc38.x86_64
libacl-2.3.1-4.fc37.x86_64
libarchive-3.6.1-3.fc38.x86_64
libattr-2.5.1-5.fc37.x86_64
libblkid-2.38.1-2.fc38.x86_64
libbrotli-1.0.9-10.fc38.x86_64
libcap-2.48-5.fc37.x86_64
libcap-ng-0.8.3-3.fc37.x86_64
libcom_err-1.46.5-3.fc37.x86_64
libcurl-7.86.0-4.fc38.x86_64
libdb-5.3.28-53.fc37.x86_64
libeconf-0.4.0-4.fc37.x86_64
libevent-2.1.12-7.fc37.x86_64
libfdisk-2.38.1-2.fc38.x86_64
libffi-3.4.4-1.fc38.x86_64
libgcc-12.2.1-4.fc38.x86_64
libgomp-12.2.1-4.fc38.x86_64
libidn2-2.3.4-1.fc38.x86_64
libmount-2.38.1-2.fc38.x86_64
libnghttp2-1.51.0-1.fc38.x86_64
libnsl2-2.0.0-4.fc37.x86_64
libpkgconf-1.8.0-3.fc37.x86_64
libpsl-0.21.1-6.fc37.x86_64
libpwquality-1.4.4-11.fc37.x86_64
libselinux-3.4-6.fc38.x86_64
libsemanage-3.4-6.fc38.x86_64
libsepol-3.4-4.fc38.x86_64
libsigsegv-2.14-3.fc37.x86_64
libsmartcols-2.38.1-2.fc38.x86_64
libssh-0.10.4-2.fc38.x86_64
libssh-config-0.10.4-2.fc38.noarch
libstdc++-12.2.1-4.fc38.x86_64
libtasn1-4.19.0-1.fc38.x86_64
libtirpc-1.3.3-0.fc37.x86_64
libunistring-1.0-2.fc37.x86_64
libutempter-1.2.1-7.fc37.x86_64
libuuid-2.38.1-2.fc38.x86_64
libverto-0.3.2-4.fc37.x86_64
libxcrypt-4.4.33-3.fc38.x86_64
libxml2-2.10.3-2.fc38.x86_64
libzstd-1.5.2-3.fc37.x86_64
lua-libs-5.4.4-6.fc38.x86_64
lua-srpm-macros-1-7.fc37.noarch
lz4-libs-1.9.3-5.fc37.x86_64
mpfr-4.1.1-2.fc38.x86_64
ncurses-base-6.3-4.20221126.fc38.noarch
ncurses-libs-6.3-4.20221126.fc38.x86_64
nettle-3.8-2.fc37.x86_64
nim-srpm-macros-3-7.fc37.noarch
ocaml-srpm-macros-7-2.fc37.noarch
openblas-srpm-macros-2-12.fc37.noarch
openldap-2.6.3-1.fc38.x86_64
openssl-libs-1:3.0.5-6.fc38.x86_64
p11-kit-0.24.1-3.fc37.x86_64
p11-kit-trust-0.24.1-3.fc37.x86_64
package-notes-srpm-macros-0.5-6.fc38.noarch
pam-1.5.2-14.fc37.x86_64
pam-libs-1.5.2-14.fc37.x86_64
patch-2.7.6-17.fc37.x86_64
pcre2-10.40-1.fc37.1.x86_64
pcre2-syntax-10.40-1.fc37.1.noarch
perl-srpm-macros-1-47.fc38.noarch
pkgconf-1.8.0-3.fc37.x86_64
pkgconf-m4-1.8.0-3.fc37.noarch
pkgconf-pkg-config-1.8.0-3.fc37.x86_64
popt-1.19-1.fc38.x86_64
publicsuffix-list-dafsa-20210518-5.fc37.noarch
python-srpm-macros-3.11-5.fc38.noarch
qt5-srpm-macros-5.15.7-1.fc38.noarch
readline-8.2-2.fc38.x86_64
redhat-rpm-config-233-1.fc38.noarch
rpm-4.18.0-8.fc38.x86_64
rpm-build-4.18.0-8.fc38.x86_64
rpm-build-libs-4.18.0-8.fc38.x86_64
rpm-libs-4.18.0-8.fc38.x86_64
rpm-sequoia-1.2.0-1.fc38.x86_64
rpmautospec-rpm-macros-0.3.1-1.fc38.noarch
rust-srpm-macros-23-1.fc38.noarch
sed-4.8-11.fc37.x86_64
setup-2.14.3-1.fc38.noarch
shadow-utils-2:4.13-3.fc38.x86_64
sqlite-libs-3.40.0-1.fc38.x86_64
systemd-libs-252.2-591.fc38.x86_64
tar-2:1.34-5.fc38.x86_64
tzdata-2022f-1.fc38.noarch
unzip-6.0-58.fc38.x86_64
util-linux-2.38.1-2.fc38.x86_64
util-linux-core-2.38.1-2.fc38.x86_64
which-2.21-36.fc38.x86_64
xxhash-libs-0.8.1-3.fc37.x86_64
xz-5.2.9-1.fc38.x86_64
xz-libs-5.2.9-1.fc38.x86_64
zip-3.0-35.fc38.x86_64
zlib-1.2.12-5.fc38.x86_64
zstd-1.5.2-3.fc37.x86_64
Complete!
Finish: dnf install
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: findutils-4.9.0-2.fc37.x86_64
dwz-0.15-1.fc38.x86_64
rpm-libs-4.18.0-8.fc38.x86_64
popt-1.19-1.fc38.x86_64
fpc-srpm-macros-1.3-6.fc37.noarch
libarchive-3.6.1-3.fc38.x86_64
krb5-libs-1.20.1-3.fc38.x86_64
libidn2-2.3.4-1.fc38.x86_64
nim-srpm-macros-3-7.fc37.noarch
p11-kit-0.24.1-3.fc37.x86_64
gmp-6.2.1-3.fc37.x86_64
which-2.21-36.fc38.x86_64
libeconf-0.4.0-4.fc37.x86_64
libssh-0.10.4-2.fc38.x86_64
libblkid-2.38.1-2.fc38.x86_64
libacl-2.3.1-4.fc37.x86_64
audit-libs-3.0.9-1.fc38.x86_64
gnat-srpm-macros-4-16.fc37.noarch
p11-kit-trust-0.24.1-3.fc37.x86_64
openssl-libs-3.0.5-6.fc38.x86_64
publicsuffix-list-dafsa-20210518-5.fc37.noarch
bash-5.2.9-3.fc38.x86_64
libdb-5.3.28-53.fc37.x86_64
package-notes-srpm-macros-0.5-6.fc38.noarch
coreutils-9.1-8.fc38.x86_64
grep-3.8-1.fc38.x86_64
gdb-minimal-12.1-9.fc38.x86_64
libselinux-3.4-6.fc38.x86_64
fedora-repos-rawhide-38-0.3.noarch
kernel-srpm-macros-1.0-15.fc37.noarch
sqlite-libs-3.40.0-1.fc38.x86_64
pcre2-10.40-1.fc37.1.x86_64
libfdisk-2.38.1-2.fc38.x86_64
glibc-minimal-langpack-2.36.9000-13.fc38.x86_64
libxcrypt-4.4.33-3.fc38.x86_64
libsepol-3.4-4.fc38.x86_64
pkgconf-1.8.0-3.fc37.x86_64
elfutils-0.188-3.fc38.x86_64
fonts-srpm-macros-2.0.5-9.fc38.noarch
openldap-2.6.3-1.fc38.x86_64
binutils-2.39-5.fc38.x86_64
elfutils-libelf-0.188-3.fc38.x86_64
elfutils-libs-0.188-3.fc38.x86_64
libnghttp2-1.51.0-1.fc38.x86_64
libattr-2.5.1-5.fc37.x86_64
zip-3.0-35.fc38.x86_64
lua-srpm-macros-1-7.fc37.noarch
coreutils-common-9.1-8.fc38.x86_64
shadow-utils-4.13-3.fc38.x86_64
authselect-libs-1.4.2-1.fc38.x86_64
fedora-repos-38-0.3.noarch
ca-certificates-2022.2.54-5.fc37.noarch
libcurl-7.86.0-4.fc38.x86_64
rpmautospec-rpm-macros-0.3.1-1.fc38.noarch
glibc-gconv-extra-2.36.9000-13.fc38.x86_64
libcap-2.48-5.fc37.x86_64
pam-libs-1.5.2-14.fc37.x86_64
file-5.42-4.fc37.x86_64
authselect-1.4.2-1.fc38.x86_64
unzip-6.0-58.fc38.x86_64
libpkgconf-1.8.0-3.fc37.x86_64
libevent-2.1.12-7.fc37.x86_64
pkgconf-m4-1.8.0-3.fc37.noarch
gawk-5.1.1-4.fc37.x86_64
cracklib-2.9.7-30.fc38.x86_64
pcre2-syntax-10.40-1.fc37.1.noarch
libpwquality-1.4.4-11.fc37.x86_64
rust-srpm-macros-23-1.fc38.noarch
sed-4.8-11.fc37.x86_64
rpm-build-4.18.0-8.fc38.x86_64
perl-srpm-macros-1-47.fc38.noarch
basesystem-11-14.fc37.noarch
libtirpc-1.3.3-0.fc37.x86_64
libstdc++-12.2.1-4.fc38.x86_64
systemd-libs-252.2-591.fc38.x86_64
ocaml-srpm-macros-7-2.fc37.noarch
qt5-srpm-macros-5.15.7-1.fc38.noarch
fedora-release-identity-basic-38-0.6.noarch
gpg-pubkey-5323552a-6112bcdc
curl-7.86.0-4.fc38.x86_64
jansson-2.13.1-5.fc37.x86_64
alternatives-1.21-1.fc38.x86_64
libbrotli-1.0.9-10.fc38.x86_64
rpm-build-libs-4.18.0-8.fc38.x86_64
lua-libs-5.4.4-6.fc38.x86_64
fedora-release-38-0.6.noarch
libxml2-2.10.3-2.fc38.x86_64
cyrus-sasl-lib-2.1.28-8.fc38.x86_64
pam-1.5.2-14.fc37.x86_64
gpg-pubkey-eb10b464-6202d9c6
binutils-gold-2.39-5.fc38.x86_64
redhat-rpm-config-233-1.fc38.noarch
tar-1.34-5.fc38.x86_64
cpio-2.13-13.fc38.x86_64
gzip-1.12-2.fc37.x86_64
libpsl-0.21.1-6.fc37.x86_64
crypto-policies-20221110-1.git87a75f4.fc38.noarch
pkgconf-pkg-config-1.8.0-3.fc37.x86_64
tzdata-2022f-1.fc38.noarch
glibc-common-2.36.9000-13.fc38.x86_64
libutempter-1.2.1-7.fc37.x86_64
nettle-3.8-2.fc37.x86_64
fedora-release-common-38-0.6.noarch
libsigsegv-2.14-3.fc37.x86_64
libnsl2-2.0.0-4.fc37.x86_64
elfutils-default-yama-scope-0.188-3.fc38.noarch
gdbm-libs-1.23-2.fc37.x86_64
libgomp-12.2.1-4.fc38.x86_64
libmount-2.38.1-2.fc38.x86_64
python-srpm-macros-3.11-5.fc38.noarch
mpfr-4.1.1-2.fc38.x86_64
rpm-sequoia-1.2.0-1.fc38.x86_64
glibc-2.36.9000-13.fc38.x86_64
libsemanage-3.4-6.fc38.x86_64
patch-2.7.6-17.fc37.x86_64
util-linux-2.38.1-2.fc38.x86_64
bzip2-1.0.8-12.fc37.x86_64
util-linux-core-2.38.1-2.fc38.x86_64
zlib-1.2.12-5.fc38.x86_64
libverto-0.3.2-4.fc37.x86_64
libcom_err-1.46.5-3.fc37.x86_64
libtasn1-4.19.0-1.fc38.x86_64
libzstd-1.5.2-3.fc37.x86_64
ghc-srpm-macros-1.5.0-7.fc37.noarch
debugedit-5.0-5.fc37.x86_64
info-7.0.1-1.fc38.x86_64
libsmartcols-2.38.1-2.fc38.x86_64
keyutils-libs-1.6.1-5.fc37.x86_64
go-srpm-macros-3.2.0-1.fc38.noarch
filesystem-3.18-2.fc37.x86_64
libunistring-1.0-2.fc37.x86_64
rpm-4.18.0-8.fc38.x86_64
ansible-srpm-macros-1-8.1.fc38.noarch
readline-8.2-2.fc38.x86_64
setup-2.14.3-1.fc38.noarch
libgcc-12.2.1-4.fc38.x86_64
diffutils-3.8-3.fc37.x86_64
elfutils-debuginfod-client-0.188-3.fc38.x86_64
bzip2-libs-1.0.8-12.fc37.x86_64
ncurses-base-6.3-4.20221126.fc38.noarch
ncurses-libs-6.3-4.20221126.fc38.x86_64
xz-libs-5.2.9-1.fc38.x86_64
file-libs-5.42-4.fc37.x86_64
libssh-config-0.10.4-2.fc38.noarch
efi-srpm-macros-5-6.fc37.noarch
xz-5.2.9-1.fc38.x86_64
ed-1.18-2.fc37.x86_64
xxhash-libs-0.8.1-3.fc37.x86_64
libuuid-2.38.1-2.fc38.x86_64
libcap-ng-0.8.3-3.fc37.x86_64
zstd-1.5.2-3.fc37.x86_64
libffi-3.4.4-1.fc38.x86_64
fedora-gpg-keys-38-0.3.noarch
openblas-srpm-macros-2-12.fc37.noarch
lz4-libs-1.9.3-5.fc37.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1670457600
Wrote: /builddir/build/SRPMS/snakemake-7.18.1-1.fc38.src.rpm
Finish: rpmbuild -bs
cp: ‘var/lib/mock/fedora-rawhide-x86_64-1670526512.550555/root/var/log’: No such file or directory
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1670526512.550555/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1670526512.550555/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1670526512.550555/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-jh8vbzty/snakemake/snakemake.spec) Config(child) 1 minutes 9 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/snakemake-7.18.1-1.fc38.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1670526512.550555 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 3.5 starting (python version = 3.11.0, NVR = mock-3.5-1.fc37)...
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-7.18.1-1.fc38.src.rpm) Config(fedora-rawhide-x86_64)
Start: clean chroot
Finish: clean chroot
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1670526512.550555/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1670526512.550555/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 3.5
INFO: Mock Version: 3.5
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1670526512.550555/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 3.5
INFO: Mock Version: 3.5
Start: dnf update
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 95 kB/s | 3.7 kB 00:00
fedora 239 kB/s | 20 kB 00:00
Dependencies resolved.
Nothing to do.
Complete!
Finish: dnf update
Finish: chroot init
Start: build phase for snakemake-7.18.1-1.fc38.src.rpm
Start: build setup for snakemake-7.18.1-1.fc38.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1670457600
Wrote: /builddir/build/SRPMS/snakemake-7.18.1-1.fc38.src.rpm
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 138 kB/s | 3.7 kB 00:00
fedora 210 kB/s | 20 kB 00:00
Dependencies resolved.
====================================================================================================
Package Arch Version Repo Size
====================================================================================================
Installing:
latexmk noarch 4.78-1.fc38 fedora 397 k
librsvg2-tools x86_64 2.55.1-3.fc38 fedora 1.8 M
make x86_64 1:4.3-11.fc37 fedora 542 k
python3-boto3 noarch 1.26.25-1.fc38 copr_base 185 k
python3-configargparse noarch 1.5.3-3.fc37 copr_base 46 k
python3-devel x86_64 3.11.0-1.fc38 fedora 269 k
python3-pandas x86_64 1.3.5-2.fc37~bootstrap fedora 6.9 M
python3-pytest noarch 7.2.0-1.fc38 fedora 2.0 M
python3-requests-mock noarch 1.9.3-3.fc37 fedora 60 k
python3-sphinx-latex noarch 1:5.3.0-1.fc38 copr_base 11 k
texlive-xetex x86_64 9:20210325-52.fc38 fedora 1.2 M
texlive-xindy x86_64 9:20210325-52.fc38 fedora 1.7 M
Installing dependencies:
adobe-mappings-cmap noarch 20190730-4.fc37 fedora 2.1 M
adobe-mappings-cmap-deprecated noarch 20190730-4.fc37 fedora 113 k
adobe-mappings-pdf noarch 20190401-2.fc37 fedora 697 k
at-spi2-core x86_64 2.46.0-2.fc38 fedora 371 k
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avahi-libs x86_64 0.8-19.fc38 fedora 67 k
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python3-idna noarch 3.4-1.fc38 copr_base 105 k
python3-imagesize noarch 1.4.1-1.fc38 copr_base 23 k
python3-iniconfig noarch 1.1.1-9.fc37 fedora 18 k
python3-jinja2 noarch 3.0.3-6.fc38 copr_base 606 k
python3-jmespath noarch 1.0.1-1.fc38 copr_base 55 k
python3-libs x86_64 3.11.0-1.fc38 fedora 9.6 M
python3-markupsafe x86_64 2.1.1-3.fc37 fedora 30 k
python3-numpy x86_64 1:1.23.5-1.fc38 fedora 7.6 M
python3-packaging noarch 21.3-7.fc38 copr_base 90 k
python3-pluggy noarch 1.0.0-5.fc38 copr_base 40 k
python3-pygments noarch 2.13.0-1.fc38 copr_base 2.3 M
python3-pyparsing noarch 3.0.9-2.fc37 fedora 262 k
python3-pysocks noarch 1.7.1-15.fc37 copr_base 40 k
python3-pytz noarch 2022.6-2.fc38 fedora 65 k
python3-requests noarch 2.28.1-3.fc38 copr_base 145 k
python3-rpm-generators noarch 13-2.fc37 fedora 30 k
python3-rpm-macros noarch 3.11-5.fc38 fedora 14 k
python3-s3transfer noarch 0.6.0-3.fc37 fedora 151 k
python3-setuptools noarch 65.5.1-1.fc38 copr_base 1.5 M
python3-six noarch 1.16.0-8.fc37 copr_base 43 k
python3-snowballstemmer noarch 2.2.0-4.fc38 fedora 260 k
python3-sphinx noarch 1:5.3.0-1.fc38 copr_base 2.6 M
python3-sphinx-theme-alabaster noarch 0.7.12-16.fc37 copr_base 24 k
python3-sphinxcontrib-applehelp noarch 1.0.2-10.fc37 copr_base 37 k
python3-sphinxcontrib-devhelp noarch 1.0.2-10.fc37 copr_base 31 k
python3-sphinxcontrib-htmlhelp noarch 2.0.0-7.fc37 fedora 55 k
python3-sphinxcontrib-jsmath noarch 1.0.1-18.fc37 copr_base 18 k
python3-sphinxcontrib-qthelp noarch 1.0.3-11.fc37 copr_base 37 k
python3-sphinxcontrib-serializinghtml noarch 1.1.5-6.fc37 copr_base 36 k
python3-urllib3 noarch 1.26.12-1.fc38 copr_base 233 k
rav1e-libs x86_64 0.5.1-5.fc37 fedora 910 k
shared-mime-info x86_64 2.2-2.fc37 fedora 381 k
sombok x86_64 2.4.0-17.fc37 fedora 47 k
svt-av1-libs x86_64 1.3.0-1.fc38 fedora 2.1 M
teckit x86_64 2.5.9-9.fc37 fedora 433 k
texlive-ae noarch 9:svn15878.1.4-61.fc38 fedora 116 k
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texlive-amscls noarch 9:svn55378-61.fc38 fedora 1.1 M
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texlive-dvipdfmx x86_64 9:20210325-52.fc38 fedora 3.0 M
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texlive-ec noarch 9:svn25033.1.0-61.fc38 fedora 682 k
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texlive-gsftopk x86_64 9:20210325-52.fc38 fedora 35 k
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texlive-luahbtex x86_64 9:20210325-52.fc38 fedora 2.0 M
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texlive-luaotfload noarch 9:20210325-52.fc38 fedora 1.2 M
texlive-luatex x86_64 9:20210325-52.fc38 fedora 3.8 M
texlive-luatex85 noarch 9:svn41456-61.fc38 fedora 19 k
texlive-luatexbase noarch 9:svn52663-61.fc38 fedora 17 k
texlive-makecmds noarch 9:svn15878.0-61.fc38 fedora 16 k
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texlive-metafont x86_64 9:20210325-52.fc38 fedora 264 k
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texlive-mflogo-font noarch 9:svn54512-61.fc38 fedora 32 k
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texlive-mfware x86_64 9:20210325-52.fc38 fedora 100 k
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texlive-modes noarch 9:svn56303-61.fc38 fedora 306 k
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texlive-ms noarch 9:svn57473-61.fc38 fedora 18 k
texlive-multido noarch 9:svn18302.1.42-61.fc38 fedora 18 k
texlive-natbib noarch 9:svn20668.8.31b-61.fc38 fedora 32 k
texlive-ncntrsbk noarch 9:svn31835.0-61.fc38 fedora 367 k
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texlive-notoccite noarch 9:svn18129.0-61.fc38 fedora 13 k
texlive-oberdiek noarch 9:20210325-52.fc38 fedora 8.6 M
texlive-pagesel noarch 9:svn56105-61.fc38 fedora 341 k
texlive-palatino noarch 9:svn31835.0-61.fc38 fedora 428 k
texlive-paralist noarch 9:svn43021-61.fc38 fedora 18 k
texlive-parallel noarch 9:svn15878.0-61.fc38 fedora 18 k
texlive-parskip noarch 9:svn58358-61.fc38 fedora 17 k
texlive-pdfcolmk noarch 9:svn52912-61.fc38 fedora 19 k
texlive-pdfescape noarch 9:svn53082-61.fc38 fedora 353 k
texlive-pdftex x86_64 9:20210325-52.fc38 fedora 2.0 M
texlive-pdftexcmds noarch 9:svn55777-61.fc38 fedora 391 k
texlive-pgf noarch 9:svn57240-61.fc38 fedora 902 k
texlive-picture noarch 9:svn54867-61.fc38 fedora 313 k
texlive-placeins noarch 9:svn19848.2.2-61.fc38 fedora 14 k
texlive-plain noarch 9:svn57963-61.fc38 fedora 49 k
texlive-polyglossia noarch 9:svn58869-61.fc38 fedora 212 k
texlive-pslatex noarch 9:svn57434-61.fc38 fedora 23 k
texlive-psnfss noarch 9:svn54694-61.fc38 fedora 60 k
texlive-pspicture noarch 9:svn15878.0-61.fc38 fedora 17 k
texlive-pst-3d noarch 9:svn17257.1.10-61.fc38 fedora 19 k
texlive-pst-coil noarch 9:svn37377.1.07-61.fc38 fedora 19 k
texlive-pst-eps noarch 9:svn15878.1.0-61.fc38 fedora 18 k
texlive-pst-fill noarch 9:svn15878.1.01-61.fc38 fedora 19 k
texlive-pst-grad noarch 9:svn15878.1.06-61.fc38 fedora 19 k
texlive-pst-math noarch 9:svn49425-61.fc38 fedora 21 k
texlive-pst-node noarch 9:svn54687-61.fc38 fedora 41 k
texlive-pst-ovl noarch 9:svn54963-61.fc38 fedora 17 k
texlive-pst-plot noarch 9:svn54080-61.fc38 fedora 38 k
texlive-pst-text noarch 9:svn49542-61.fc38 fedora 19 k
texlive-pst-tools noarch 9:svn54518-61.fc38 fedora 21 k
texlive-pst-tree noarch 9:svn43272-61.fc38 fedora 21 k
texlive-pstricks noarch 9:svn58371-61.fc38 fedora 105 k
texlive-pstricks-add noarch 9:svn53763-61.fc38 fedora 37 k
texlive-pxfonts noarch 9:svn15878.0-61.fc38 fedora 524 k
texlive-qstest noarch 9:svn15878.0-61.fc38 fedora 20 k
texlive-ragged2e noarch 9:svn57638-61.fc38 fedora 664 k
texlive-refcount noarch 9:svn53164-61.fc38 fedora 335 k
texlive-rerunfilecheck noarch 9:svn54841-61.fc38 fedora 324 k
texlive-rsfs noarch 9:svn15878.0-61.fc38 fedora 74 k
texlive-sauerj noarch 9:svn15878.0-61.fc38 fedora 20 k
texlive-setspace noarch 9:svn24881.6.7a-61.fc38 fedora 19 k
texlive-showexpl noarch 9:svn57414-61.fc38 fedora 19 k
texlive-soul noarch 9:svn56495-61.fc38 fedora 21 k
texlive-stringenc noarch 9:svn52982-61.fc38 fedora 703 k
texlive-subfig noarch 9:svn15878.1.3-61.fc38 fedora 22 k
texlive-symbol noarch 9:svn31835.0-61.fc38 fedora 55 k
texlive-tabulary noarch 9:svn34368.0.10-61.fc38 fedora 19 k
texlive-tex x86_64 9:20210325-52.fc38 fedora 210 k
texlive-tex-gyre noarch 9:svn48058-61.fc38 fedora 8.0 M
texlive-tex-gyre-math noarch 9:svn41264-61.fc38 fedora 1.4 M
texlive-tex-ini-files noarch 9:svn40533-61.fc38 fedora 16 k
texlive-texlive-common-doc noarch 9:svn54176-61.fc38 fedora 106 k
texlive-texlive-en noarch 9:20210325-52.fc38 fedora 1.9 M
texlive-texlive-msg-translations noarch 9:svn59096-61.fc38 fedora 162 k
texlive-texlive-scripts noarch 9:20210325-52.fc38 fedora 116 k
texlive-texlive.infra noarch 9:20210325-52.fc38 fedora 288 k
texlive-thumbpdf noarch 9:20210325-52.fc38 fedora 40 k
texlive-times noarch 9:svn35058.0-61.fc38 fedora 371 k
texlive-tipa noarch 9:svn29349.1.3-61.fc38 fedora 2.8 M
texlive-titlesec noarch 9:svn52413-61.fc38 fedora 35 k
texlive-tools noarch 9:svn56514-61.fc38 fedora 73 k
texlive-txfonts noarch 9:svn15878.0-61.fc38 fedora 817 k
texlive-ucharcat noarch 9:svn38907-61.fc38 fedora 16 k
texlive-ucs noarch 9:svn35853.2.2-61.fc38 fedora 383 k
texlive-underscore noarch 9:svn18261.0-61.fc38 fedora 19 k
texlive-unicode-data noarch 9:svn56768-61.fc38 fedora 360 k
texlive-unicode-math noarch 9:svn56594-61.fc38 fedora 64 k
texlive-uniquecounter noarch 9:svn53162-61.fc38 fedora 301 k
texlive-upquote noarch 9:svn26059.v1.3-61.fc38 fedora 17 k
texlive-url noarch 9:svn32528.3.4-61.fc38 fedora 20 k
texlive-utopia noarch 9:svn15878.0-61.fc38 fedora 240 k
texlive-varwidth noarch 9:svn24104.0.92-61.fc38 fedora 18 k
texlive-wasy noarch 9:svn53533-61.fc38 fedora 44 k
texlive-wasy-type1 noarch 9:svn53534-61.fc38 fedora 272 k
texlive-wasysym noarch 9:svn54080-61.fc38 fedora 19 k
texlive-wrapfig noarch 9:svn22048.3.6-61.fc38 fedora 24 k
texlive-xcolor noarch 9:svn41044-61.fc38 fedora 33 k
texlive-xdvi x86_64 9:20210325-52.fc38 fedora 354 k
texlive-xetexconfig noarch 9:svn45845-61.fc38 fedora 12 k
texlive-xifthen noarch 9:svn38929-61.fc38 fedora 17 k
texlive-xkeyval noarch 9:svn57006-61.fc38 fedora 28 k
texlive-xpatch noarch 9:svn54563-61.fc38 fedora 19 k
texlive-xstring noarch 9:svn49946-61.fc38 fedora 26 k
texlive-xunicode noarch 9:svn30466.0.981-61.fc38 fedora 45 k
texlive-zapfchan noarch 9:svn31835.0-61.fc38 fedora 110 k
texlive-zapfding noarch 9:svn31835.0-61.fc38 fedora 65 k
texlive-zref noarch 9:svn56611-61.fc38 fedora 672 k
urw-base35-bookman-fonts noarch 20200910-15.fc37 fedora 848 k
urw-base35-c059-fonts noarch 20200910-15.fc37 fedora 875 k
urw-base35-d050000l-fonts noarch 20200910-15.fc37 fedora 76 k
urw-base35-fonts noarch 20200910-15.fc37 fedora 11 k
urw-base35-fonts-common noarch 20200910-15.fc37 fedora 21 k
urw-base35-gothic-fonts noarch 20200910-15.fc37 fedora 643 k
urw-base35-nimbus-mono-ps-fonts noarch 20200910-15.fc37 fedora 796 k
urw-base35-nimbus-roman-fonts noarch 20200910-15.fc37 fedora 857 k
urw-base35-nimbus-sans-fonts noarch 20200910-15.fc37 fedora 1.3 M
urw-base35-p052-fonts noarch 20200910-15.fc37 fedora 974 k
urw-base35-standard-symbols-ps-fonts noarch 20200910-15.fc37 fedora 42 k
urw-base35-z003-fonts noarch 20200910-15.fc37 fedora 276 k
vim-filesystem noarch 2:9.0.1006-1.fc38 fedora 19 k
xdg-utils noarch 1.1.3-12.fc37 fedora 77 k
xml-common noarch 0.6.3-59.fc37 fedora 31 k
xprop x86_64 1.2.5-2.fc37 fedora 35 k
zziplib x86_64 0.13.72-2.fc37 fedora 86 k
Transaction Summary
====================================================================================================
Install 665 Packages
Total download size: 355 M
Installed size: 1.1 G
Downloading Packages:
(1/665): python-pip-wheel-22.3.1-1.fc38.noarch. 22 MB/s | 1.4 MB 00:00
(2/665): python-setuptools-wheel-65.5.1-1.fc38. 10 MB/s | 716 kB 00:00
(3/665): python3-attrs-22.1.0-1.fc37.noarch.rpm 39 MB/s | 110 kB 00:00
(4/665): python3-boto3-1.26.25-1.fc38.noarch.rp 16 MB/s | 185 kB 00:00
(5/665): python3-botocore-1.29.25-1.fc38.noarch 124 MB/s | 5.7 MB 00:00
(6/665): python3-docutils-0.19-1.fc38.noarch.rp 155 MB/s | 1.0 MB 00:00
(7/665): python3-configargparse-1.5.3-3.fc37.no 1.0 MB/s | 46 kB 00:00
(8/665): python3-idna-3.4-1.fc38.noarch.rpm 43 MB/s | 105 kB 00:00
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Verifying : xprop-1.2.5-2.fc37.x86_64 664/665
Verifying : zziplib-0.13.72-2.fc37.x86_64 665/665
Installed:
adobe-mappings-cmap-20190730-4.fc37.noarch
adobe-mappings-cmap-deprecated-20190730-4.fc37.noarch
adobe-mappings-pdf-20190401-2.fc37.noarch
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cups-libs-1:2.4.2-5.fc38.x86_64
dbus-1:1.14.4-1.fc38.x86_64
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fcgi-2.4.0-45.fc38.x86_64
ffcall-2.4-4.fc37.x86_64
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fontconfig-2.14.1-2.fc38.x86_64
fonts-filesystem-1:2.0.5-9.fc38.noarch
freetype-2.12.1-3.fc37.x86_64
fribidi-1.0.12-2.fc37.x86_64
gc-8.2.2-1.fc38.x86_64
gd-2.3.3-9.fc38.x86_64
gdk-pixbuf2-2.42.10-1.fc38.x86_64
gdk-pixbuf2-modules-2.42.10-1.fc38.x86_64
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ghostscript-tools-fonts-9.56.1-5.fc38.x86_64
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glib2-2.74.1-2.fc38.x86_64
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zziplib-0.13.72-2.fc37.x86_64
Complete!
Finish: build setup for snakemake-7.18.1-1.fc38.src.rpm
Start: rpmbuild snakemake-7.18.1-1.fc38.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1670457600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.qLkDw0
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf snakemake-7.18.1
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-7.18.1.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd snakemake-7.18.1
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/snakemake-7.11.0-docs-no-animated-demo.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ '[' -z sP ']'
+ shebang_flags=-kasP
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP .
recursedown('.')
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recursedown('./misc/vim/ftdetect')
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recursedown('./snakemake/executors')
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recursedown('./snakemake/report')
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recursedown('./snakemake/unit_tests/templates')
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recursedown('./tests/linting/log_directive')
recursedown('./tests/linting/long_run')
recursedown('./tests/linting/missing_software_definition')
recursedown('./tests/linting/mixed_func_and_rules')
recursedown('./tests/linting/not_used_params')
recursedown('./tests/linting/params_prefix')
recursedown('./tests/linting/path_add')
recursedown('./tests/linting/singularity')
recursedown('./tests/linting/tab_usage')
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recursedown('./tests/profile')
recursedown("./tests/test (with parenthese's)")
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recursedown('./tests/test01')
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recursedown('./tests/test01/expected-results/dir')
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recursedown('./tests/test_srcdir/expected-results')
recursedown('./tests/test_static_remote')
recursedown('./tests/test_static_remote/expected-results')
recursedown('./tests/test_strict_mode')
recursedown('./tests/test_strict_mode/expected-results')
recursedown('./tests/test_string_resources')
recursedown('./tests/test_string_resources/expected-results')
recursedown('./tests/test_subworkflow_config')
recursedown('./tests/test_subworkflow_config/expected-results')
recursedown('./tests/test_subworkflows')
recursedown('./tests/test_subworkflows/expected-results')
recursedown('./tests/test_symlink_temp')
recursedown('./tests/test_symlink_temp/expected-results')
recursedown('./tests/test_symlink_time_handling')
recursedown('./tests/test_symlink_time_handling/expected-results')
recursedown('./tests/test_temp')
recursedown('./tests/test_temp/expected-results')
recursedown('./tests/test_temp_expand')
recursedown('./tests/test_temp_expand/expected-results')
recursedown('./tests/test_template_engine')
recursedown('./tests/test_template_engine/expected-results')
recursedown('./tests/test_tes')
recursedown('./tests/test_tes/expected-results')
recursedown('./tests/test_threads')
recursedown('./tests/test_threads/expected-results')
recursedown('./tests/test_threads0')
recursedown('./tests/test_threads0/expected-results')
recursedown('./tests/test_tibanna')
recursedown('./tests/test_tibanna/expected-results')
recursedown('./tests/test_tibanna/scripts')
recursedown('./tests/test_tmpdir')
recursedown('./tests/test_tmpdir/expected-results')
recursedown('./tests/test_touch')
recursedown('./tests/test_touch/expected-results')
recursedown('./tests/test_touch_pipeline_with_temp_dir')
recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results')
recursedown('./tests/test_touch_remote_prefix')
recursedown('./tests/test_touch_remote_prefix/expected-results')
recursedown('./tests/test_unpack_dict')
recursedown('./tests/test_unpack_dict/expected-results')
recursedown('./tests/test_unpack_list')
recursedown('./tests/test_unpack_list/expected-results')
recursedown('./tests/test_until')
recursedown('./tests/test_until/expected-results')
recursedown('./tests/test_update_config')
recursedown('./tests/test_update_config/expected-results')
recursedown('./tests/test_url_include')
recursedown('./tests/test_url_include/expected-results')
recursedown('./tests/test_use_rule_same_module')
recursedown('./tests/test_use_rule_same_module/expected-results')
recursedown('./tests/test_validate')
recursedown('./tests/test_validate/expected-results')
recursedown('./tests/test_wildcard_count_ambiguity')
recursedown('./tests/test_wildcard_count_ambiguity/expected-results')
recursedown('./tests/test_wildcard_keyword')
recursedown('./tests/test_wildcard_keyword/expected-results')
recursedown('./tests/test_wrapper')
recursedown('./tests/test_wrapper/expected-results')
recursedown('./tests/test_xrootd')
recursedown('./tests/test_yaml_config')
recursedown('./tests/test_yaml_config/expected-results')
+ sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py
+ sed -r -i 's@"python"@"/usr/bin/python3"@g' tests/test_linting.py
+ sed -r -i /sphinxcontrib-napoleon/d docs/requirements.txt
+ echo 'latex_engine = '\''xelatex'\'''
+ RPM_EC=0
++ jobs -p
+ exit 0
+ umask 022
+ cd /builddir/build/BUILD
+ cd snakemake-7.18.1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(pip) >= 19'
+ echo 'python3dist(packaging)'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(toml) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ TMPDIR=/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ RPM_TOXENV=py311
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.18.1/pyproject-wheeldir -x reports,messaging,google-cloud docs/requirements.txt
Handling sphinx >=3 from requirements file docs/requirements.txt
Requirement satisfied: sphinx >=3
(installed: sphinx 5.3.0)
Handling sphinx-argparse from requirements file docs/requirements.txt
Requirement not satisfied: sphinx-argparse
Handling sphinx_rtd_theme from requirements file docs/requirements.txt
Requirement not satisfied: sphinx_rtd_theme
Handling docutils from requirements file docs/requirements.txt
Requirement satisfied: docutils
(installed: docutils 0.19)
Handling myst-parser from requirements file docs/requirements.txt
Requirement not satisfied: myst-parser
Handling configargparse from requirements file docs/requirements.txt
Requirement satisfied: configargparse
(installed: configargparse 1.5.3)
Handling appdirs from requirements file docs/requirements.txt
Requirement not satisfied: appdirs
Exiting dependency generation pass: all requirements files
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/snakemake-7.18.1-1.fc38.buildreqs.nosrc.rpm
INFO: Going to install missing dynamic buildrequires
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 133 kB/s | 3.7 kB 00:00
fedora 445 kB/s | 20 kB 00:00
Package librsvg2-tools-2.55.1-3.fc38.x86_64 is already installed.
Package texlive-xindy-9:20210325-52.fc38.x86_64 is already installed.
Package latexmk-4.78-1.fc38.noarch is already installed.
Package make-1:4.3-11.fc37.x86_64 is already installed.
Package pyproject-rpm-macros-1.4.0-1.fc38.noarch is already installed.
Package python3-devel-3.11.0-1.fc38.x86_64 is already installed.
Package python3-devel-3.11.0-1.fc38.x86_64 is already installed.
Package python3-sphinx-latex-1:5.3.0-1.fc38.noarch is already installed.
Package python3-boto3-1.26.25-1.fc38.noarch is already installed.
Package python3-configargparse-1.5.3-3.fc37.noarch is already installed.
Package python3-configargparse-1.5.3-3.fc37.noarch is already installed.
Package python3-docutils-0.19-1.fc38.noarch is already installed.
Package python3-packaging-21.3-7.fc38.noarch is already installed.
Package python3-pandas-1.3.5-2.fc37~bootstrap.x86_64 is already installed.
Package python3-pytest-7.2.0-1.fc38.noarch is already installed.
Package python3-requests-mock-1.9.3-3.fc37.noarch is already installed.
Package python3-sphinx-1:5.3.0-1.fc38.noarch is already installed.
Package texlive-xetex-9:20210325-52.fc38.x86_64 is already installed.
Dependencies resolved.
================================================================================
Package Arch Version Repo Size
================================================================================
Installing:
python3-appdirs noarch 1.4.4-7.fc38 copr_base 24 k
python3-myst-parser noarch 0.18.1-3.fc38 copr_base 146 k
python3-pip noarch 22.3.1-1.fc38 copr_base 2.9 M
python3-sphinx-argparse noarch 0.4.0-1.fc38 copr_base 40 k
python3-sphinx_rtd_theme noarch 1.1.1-1.fc38 copr_base 72 k
Installing dependencies:
fontawesome-fonts noarch 1:4.7.0-14.fc37 fedora 204 k
google-roboto-slab-fonts noarch 1.100263-0.19.20150923git.fc38 fedora 239 k
lato-fonts noarch 2.015-14.fc37 fedora 3.1 M
libyaml x86_64 0.2.5-8.fc37 fedora 60 k
python3-markdown-it-py noarch 2.1.0-3.fc37 fedora 195 k
python3-mdit-py-plugins noarch 0.3.1-1.fc38 copr_base 91 k
python3-mdurl noarch 0.1.2-1.fc38 fedora 31 k
python3-pyyaml x86_64 6.0-5.fc37 fedora 224 k
python3-typing-extensions
noarch 4.4.0-1.fc38 copr_base 62 k
Transaction Summary
================================================================================
Install 14 Packages
Total download size: 7.3 M
Installed size: 30 M
Downloading Packages:
(1/14): python3-appdirs-1.4.4-7.fc38.noarch.rpm 331 kB/s | 24 kB 00:00
(2/14): python3-mdit-py-plugins-0.3.1-1.fc38.no 1.1 MB/s | 91 kB 00:00
(3/14): python3-pip-22.3.1-1.fc38.noarch.rpm 149 MB/s | 2.9 MB 00:00
(4/14): python3-sphinx_rtd_theme-1.1.1-1.fc38.n 16 MB/s | 72 kB 00:00
(5/14): python3-typing-extensions-4.4.0-1.fc38. 25 MB/s | 62 kB 00:00
(6/14): python3-myst-parser-0.18.1-3.fc38.noarc 1.2 MB/s | 146 kB 00:00
(7/14): python3-sphinx-argparse-0.4.0-1.fc38.no 960 kB/s | 40 kB 00:00
(8/14): fontawesome-fonts-4.7.0-14.fc37.noarch. 3.0 MB/s | 204 kB 00:00
(9/14): google-roboto-slab-fonts-1.100263-0.19. 5.2 MB/s | 239 kB 00:00
(10/14): libyaml-0.2.5-8.fc37.x86_64.rpm 46 MB/s | 60 kB 00:00
(11/14): lato-fonts-2.015-14.fc37.noarch.rpm 56 MB/s | 3.1 MB 00:00
(12/14): python3-pyyaml-6.0-5.fc37.x86_64.rpm 68 MB/s | 224 kB 00:00
(13/14): python3-mdurl-0.1.2-1.fc38.noarch.rpm 2.3 MB/s | 31 kB 00:00
(14/14): python3-markdown-it-py-2.1.0-3.fc37.no 12 MB/s | 195 kB 00:00
--------------------------------------------------------------------------------
Total 32 MB/s | 7.3 MB 00:00
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Preparing : 1/1
Installing : python3-mdurl-0.1.2-1.fc38.noarch 1/14
Installing : python3-markdown-it-py-2.1.0-3.fc37.noarch 2/14
Installing : python3-mdit-py-plugins-0.3.1-1.fc38.noarch 3/14
Installing : libyaml-0.2.5-8.fc37.x86_64 4/14
Installing : python3-pyyaml-6.0-5.fc37.x86_64 5/14
Installing : lato-fonts-2.015-14.fc37.noarch 6/14
Installing : google-roboto-slab-fonts-1.100263-0.19.20150923git 7/14
Installing : fontawesome-fonts-1:4.7.0-14.fc37.noarch 8/14
Installing : python3-typing-extensions-4.4.0-1.fc38.noarch 9/14
Installing : python3-myst-parser-0.18.1-3.fc38.noarch 10/14
Installing : python3-sphinx_rtd_theme-1.1.1-1.fc38.noarch 11/14
Installing : python3-sphinx-argparse-0.4.0-1.fc38.noarch 12/14
Installing : python3-pip-22.3.1-1.fc38.noarch 13/14
Installing : python3-appdirs-1.4.4-7.fc38.noarch 14/14
Running scriptlet: python3-appdirs-1.4.4-7.fc38.noarch 14/14
Verifying : python3-appdirs-1.4.4-7.fc38.noarch 1/14
Verifying : python3-mdit-py-plugins-0.3.1-1.fc38.noarch 2/14
Verifying : python3-myst-parser-0.18.1-3.fc38.noarch 3/14
Verifying : python3-pip-22.3.1-1.fc38.noarch 4/14
Verifying : python3-sphinx-argparse-0.4.0-1.fc38.noarch 5/14
Verifying : python3-sphinx_rtd_theme-1.1.1-1.fc38.noarch 6/14
Verifying : python3-typing-extensions-4.4.0-1.fc38.noarch 7/14
Verifying : fontawesome-fonts-1:4.7.0-14.fc37.noarch 8/14
Verifying : google-roboto-slab-fonts-1.100263-0.19.20150923git 9/14
Verifying : lato-fonts-2.015-14.fc37.noarch 10/14
Verifying : libyaml-0.2.5-8.fc37.x86_64 11/14
Verifying : python3-markdown-it-py-2.1.0-3.fc37.noarch 12/14
Verifying : python3-mdurl-0.1.2-1.fc38.noarch 13/14
Verifying : python3-pyyaml-6.0-5.fc37.x86_64 14/14
Installed:
fontawesome-fonts-1:4.7.0-14.fc37.noarch
google-roboto-slab-fonts-1.100263-0.19.20150923git.fc38.noarch
lato-fonts-2.015-14.fc37.noarch
libyaml-0.2.5-8.fc37.x86_64
python3-appdirs-1.4.4-7.fc38.noarch
python3-markdown-it-py-2.1.0-3.fc37.noarch
python3-mdit-py-plugins-0.3.1-1.fc38.noarch
python3-mdurl-0.1.2-1.fc38.noarch
python3-myst-parser-0.18.1-3.fc38.noarch
python3-pip-22.3.1-1.fc38.noarch
python3-pyyaml-6.0-5.fc37.x86_64
python3-sphinx-argparse-0.4.0-1.fc38.noarch
python3-sphinx_rtd_theme-1.1.1-1.fc38.noarch
python3-typing-extensions-4.4.0-1.fc38.noarch
Complete!
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1670457600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.sOg1jb
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf snakemake-7.18.1
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-7.18.1.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd snakemake-7.18.1
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/snakemake-7.11.0-docs-no-animated-demo.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ '[' -z sP ']'
+ shebang_flags=-kasP
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP .
recursedown('.')
recursedown('./.github')
recursedown('./.github/ISSUE_TEMPLATE')
recursedown('./.github/workflows')
recursedown('./docs')
recursedown('./docs/_static')
recursedown('./docs/apidocs')
recursedown('./docs/apidocs/api_reference')
recursedown('./docs/apidocs/api_reference/internal')
recursedown('./docs/executing')
recursedown('./docs/executor_tutorial')
recursedown('./docs/executor_tutorial/workflow')
recursedown('./docs/getting_started')
recursedown('./docs/getting_started/img')
recursedown('./docs/project_info')
recursedown('./docs/project_info/img')
recursedown('./docs/snakefiles')
recursedown('./docs/snakefiles/images')
recursedown('./docs/tutorial')
recursedown('./docs/tutorial/workflow')
recursedown('./examples')
recursedown('./examples/c')
recursedown('./examples/c/include')
recursedown('./examples/c/src')
recursedown('./examples/cufflinks')
recursedown('./examples/cufflinks/mapped')
recursedown('./examples/flux')
recursedown('./examples/hello-world')
recursedown('./examples/hello-world/envs')
recursedown('./examples/hello-world/scripts')
recursedown('./examples/idea')
recursedown('./examples/latex')
recursedown('./examples/mirna')
recursedown('./images')
recursedown('./misc')
recursedown('./misc/nano')
recursedown('./misc/nano/syntax')
recursedown('./misc/vim')
recursedown('./misc/vim/ftdetect')
recursedown('./misc/vim/ftplugin')
recursedown('./misc/vim/ftplugin/snakemake')
recursedown('./misc/vim/syntax')
recursedown('./playground')
recursedown('./playground/iteration')
recursedown('./snakemake')
recursedown('./snakemake/caching')
recursedown('./snakemake/common')
recursedown('./snakemake/deployment')
recursedown('./snakemake/executors')
recursedown('./snakemake/linting')
recursedown('./snakemake/remote')
recursedown('./snakemake/report')
recursedown('./snakemake/report/data')
recursedown('./snakemake/report/template')
recursedown('./snakemake/report/template/components')
recursedown('./snakemake/template_rendering')
recursedown('./snakemake/unit_tests')
recursedown('./snakemake/unit_tests/templates')
recursedown('./tests')
recursedown('./tests/knapsack')
recursedown('./tests/linting')
recursedown('./tests/linting/absolute_paths')
recursedown('./tests/linting/dynamic')
recursedown('./tests/linting/envvars')
recursedown('./tests/linting/iofile_by_index')
recursedown('./tests/linting/log_directive')
recursedown('./tests/linting/long_run')
recursedown('./tests/linting/missing_software_definition')
recursedown('./tests/linting/mixed_func_and_rules')
recursedown('./tests/linting/not_used_params')
recursedown('./tests/linting/params_prefix')
recursedown('./tests/linting/path_add')
recursedown('./tests/linting/singularity')
recursedown('./tests/linting/tab_usage')
recursedown('./tests/linting/version')
recursedown('./tests/profile')
recursedown("./tests/test (with parenthese's)")
recursedown("./tests/test (with parenthese's)/expected-results")
recursedown('./tests/test01')
recursedown('./tests/test01/expected-results')
recursedown('./tests/test01/expected-results/dir')
recursedown('./tests/test02')
recursedown('./tests/test02/expected-results')
recursedown('./tests/test03')
recursedown('./tests/test03/expected-results')
recursedown('./tests/test04')
recursedown('./tests/test04/expected-results')
recursedown('./tests/test05')
recursedown('./tests/test05/expected-results')
recursedown('./tests/test06')
recursedown('./tests/test06/expected-results')
recursedown('./tests/test07')
recursedown('./tests/test07/expected-results')
recursedown('./tests/test08')
recursedown('./tests/test08/expected-results')
recursedown('./tests/test09')
recursedown('./tests/test09/expected-results')
recursedown('./tests/test10')
recursedown('./tests/test10/expected-results')
recursedown('./tests/test11')
recursedown('./tests/test11/expected-results')
recursedown('./tests/test12')
recursedown('./tests/test12/expected-results')
recursedown('./tests/test13')
recursedown('./tests/test13/expected-results')
recursedown('./tests/test14')
recursedown('./tests/test14/expected-results')
recursedown('./tests/test15')
recursedown('./tests/test15/expected-results')
recursedown('./tests/testHighWorkload')
recursedown('./tests/testHighWorkload/mfa')
recursedown('./tests/test_all_temp')
recursedown('./tests/test_all_temp/expected-results')
recursedown('./tests/test_ancient')
recursedown('./tests/test_ancient/expected-results')
recursedown('./tests/test_ancient_dag')
recursedown('./tests/test_ancient_dag/expected-results')
recursedown('./tests/test_archive')
recursedown('./tests/test_archive/expected-results')
recursedown('./tests/test_bash')
recursedown('./tests/test_bash/expected-results')
recursedown('./tests/test_batch')
recursedown('./tests/test_batch/expected-results')
recursedown('./tests/test_batch_final')
recursedown('./tests/test_batch_final/expected-results')
recursedown('./tests/test_benchmark')
recursedown('./tests/test_benchmark/expected-results')
recursedown('./tests/test_cache_multioutput')
recursedown('./tests/test_cache_multioutput/expected-results')
recursedown('./tests/test_checkpoint_allowed_rules')
recursedown('./tests/test_checkpoint_allowed_rules/expected-results')
recursedown('./tests/test_checkpoints')
recursedown('./tests/test_checkpoints/expected-results')
recursedown('./tests/test_checkpoints/expected-results/aggregated')
recursedown('./tests/test_checkpoints/samples')
recursedown('./tests/test_checkpoints_dir')
recursedown('./tests/test_checkpoints_dir/expected-results')
recursedown('./tests/test_checkpoints_dir/expected-results/aggregated')
recursedown('./tests/test_checkpoints_dir/samples')
recursedown('./tests/test_cloud_checkpoints_issue574')
recursedown('./tests/test_cloud_checkpoints_issue574/expected-results')
recursedown('./tests/test_cluster_cancelscript')
recursedown('./tests/test_cluster_cancelscript/expected-results')
recursedown('./tests/test_cluster_sidecar')
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recursedown('./tests/test_template_engine')
recursedown('./tests/test_template_engine/expected-results')
recursedown('./tests/test_tes')
recursedown('./tests/test_tes/expected-results')
recursedown('./tests/test_threads')
recursedown('./tests/test_threads/expected-results')
recursedown('./tests/test_threads0')
recursedown('./tests/test_threads0/expected-results')
recursedown('./tests/test_tibanna')
recursedown('./tests/test_tibanna/expected-results')
recursedown('./tests/test_tibanna/scripts')
recursedown('./tests/test_tmpdir')
recursedown('./tests/test_tmpdir/expected-results')
recursedown('./tests/test_touch')
recursedown('./tests/test_touch/expected-results')
recursedown('./tests/test_touch_pipeline_with_temp_dir')
recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results')
recursedown('./tests/test_touch_remote_prefix')
recursedown('./tests/test_touch_remote_prefix/expected-results')
recursedown('./tests/test_unpack_dict')
recursedown('./tests/test_unpack_dict/expected-results')
recursedown('./tests/test_unpack_list')
recursedown('./tests/test_unpack_list/expected-results')
recursedown('./tests/test_until')
recursedown('./tests/test_until/expected-results')
recursedown('./tests/test_update_config')
recursedown('./tests/test_update_config/expected-results')
recursedown('./tests/test_url_include')
recursedown('./tests/test_url_include/expected-results')
recursedown('./tests/test_use_rule_same_module')
recursedown('./tests/test_use_rule_same_module/expected-results')
recursedown('./tests/test_validate')
recursedown('./tests/test_validate/expected-results')
recursedown('./tests/test_wildcard_count_ambiguity')
recursedown('./tests/test_wildcard_count_ambiguity/expected-results')
recursedown('./tests/test_wildcard_keyword')
recursedown('./tests/test_wildcard_keyword/expected-results')
recursedown('./tests/test_wrapper')
recursedown('./tests/test_wrapper/expected-results')
recursedown('./tests/test_xrootd')
recursedown('./tests/test_yaml_config')
recursedown('./tests/test_yaml_config/expected-results')
+ sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py
+ sed -r -i 's@"python"@"/usr/bin/python3"@g' tests/test_linting.py
+ sed -r -i /sphinxcontrib-napoleon/d docs/requirements.txt
+ echo 'latex_engine = '\''xelatex'\'''
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Ir6t35
+ umask 022
+ cd /builddir/build/BUILD
+ cd snakemake-7.18.1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(pip) >= 19'
+ echo 'python3dist(packaging)'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(toml) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ TMPDIR=/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ RPM_TOXENV=py311
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.18.1/pyproject-wheeldir -x reports,messaging,google-cloud docs/requirements.txt
Handling sphinx >=3 from requirements file docs/requirements.txt
Requirement satisfied: sphinx >=3
(installed: sphinx 5.3.0)
Handling sphinx-argparse from requirements file docs/requirements.txt
Requirement satisfied: sphinx-argparse
(installed: sphinx-argparse 0.4.0)
Handling sphinx_rtd_theme from requirements file docs/requirements.txt
Requirement satisfied: sphinx_rtd_theme
(installed: sphinx_rtd_theme 1.1.1)
Handling docutils from requirements file docs/requirements.txt
Requirement satisfied: docutils
(installed: docutils 0.19)
Handling myst-parser from requirements file docs/requirements.txt
Requirement satisfied: myst-parser
(installed: myst-parser 0.18.1)
Handling configargparse from requirements file docs/requirements.txt
Requirement satisfied: configargparse
(installed: configargparse 1.5.3)
Handling appdirs from requirements file docs/requirements.txt
Requirement satisfied: appdirs
(installed: appdirs 1.4.4)
Handling setuptools>=42 from build-system.requires
Requirement satisfied: setuptools>=42
(installed: setuptools 65.5.1)
HOOK STDOUT: running egg_info
HOOK STDOUT: creating snakemake.egg-info
HOOK STDOUT: writing snakemake.egg-info/PKG-INFO
HOOK STDOUT: writing dependency_links to snakemake.egg-info/dependency_links.txt
HOOK STDOUT: writing entry points to snakemake.egg-info/entry_points.txt
HOOK STDOUT: writing requirements to snakemake.egg-info/requires.txt
HOOK STDOUT: writing top-level names to snakemake.egg-info/top_level.txt
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest template 'MANIFEST.in'
HOOK STDOUT: adding license file 'LICENSE.md'
HOOK STDOUT: adding license file 'AUTHORS.rst'
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
Handling wheel from get_requires_for_build_wheel
Requirement not satisfied: wheel
Exiting dependency generation pass: get_requires_for_build_wheel
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/snakemake-7.18.1-1.fc38.buildreqs.nosrc.rpm
INFO: Going to install missing dynamic buildrequires
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 137 kB/s | 3.7 kB 00:00
fedora 69 kB/s | 20 kB 00:00
Package librsvg2-tools-2.55.1-3.fc38.x86_64 is already installed.
Package texlive-xindy-9:20210325-52.fc38.x86_64 is already installed.
Package latexmk-4.78-1.fc38.noarch is already installed.
Package make-1:4.3-11.fc37.x86_64 is already installed.
Package pyproject-rpm-macros-1.4.0-1.fc38.noarch is already installed.
Package python3-devel-3.11.0-1.fc38.x86_64 is already installed.
Package python3-devel-3.11.0-1.fc38.x86_64 is already installed.
Package python3-sphinx-latex-1:5.3.0-1.fc38.noarch is already installed.
Package python3-appdirs-1.4.4-7.fc38.noarch is already installed.
Package python3-boto3-1.26.25-1.fc38.noarch is already installed.
Package python3-configargparse-1.5.3-3.fc37.noarch is already installed.
Package python3-configargparse-1.5.3-3.fc37.noarch is already installed.
Package python3-docutils-0.19-1.fc38.noarch is already installed.
Package python3-myst-parser-0.18.1-3.fc38.noarch is already installed.
Package python3-packaging-21.3-7.fc38.noarch is already installed.
Package python3-pandas-1.3.5-2.fc37~bootstrap.x86_64 is already installed.
Package python3-pip-22.3.1-1.fc38.noarch is already installed.
Package python3-pytest-7.2.0-1.fc38.noarch is already installed.
Package python3-requests-mock-1.9.3-3.fc37.noarch is already installed.
Package python3-setuptools-65.5.1-1.fc38.noarch is already installed.
Package python3-sphinx-1:5.3.0-1.fc38.noarch is already installed.
Package python3-sphinx-argparse-0.4.0-1.fc38.noarch is already installed.
Package python3-sphinx_rtd_theme-1.1.1-1.fc38.noarch is already installed.
Package texlive-xetex-9:20210325-52.fc38.x86_64 is already installed.
Dependencies resolved.
================================================================================
Package Architecture Version Repository Size
================================================================================
Installing:
python3-wheel noarch 1:0.37.1-4.fc37 fedora 102 k
Transaction Summary
================================================================================
Install 1 Package
Total download size: 102 k
Installed size: 301 k
Downloading Packages:
python3-wheel-0.37.1-4.fc37.noarch.rpm 3.8 MB/s | 102 kB 00:00
--------------------------------------------------------------------------------
Total 561 kB/s | 102 kB 00:00
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Preparing : 1/1
Installing : python3-wheel-1:0.37.1-4.fc37.noarch 1/1
Running scriptlet: python3-wheel-1:0.37.1-4.fc37.noarch 1/1
Verifying : python3-wheel-1:0.37.1-4.fc37.noarch 1/1
Installed:
python3-wheel-1:0.37.1-4.fc37.noarch
Complete!
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1670457600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.zAXUNX
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf snakemake-7.18.1
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-7.18.1.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd snakemake-7.18.1
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/snakemake-7.11.0-docs-no-animated-demo.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ '[' -z sP ']'
+ shebang_flags=-kasP
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP .
recursedown('.')
recursedown('./.github')
recursedown('./.github/ISSUE_TEMPLATE')
recursedown('./.github/workflows')
recursedown('./docs')
recursedown('./docs/_static')
recursedown('./docs/apidocs')
recursedown('./docs/apidocs/api_reference')
recursedown('./docs/apidocs/api_reference/internal')
recursedown('./docs/executing')
recursedown('./docs/executor_tutorial')
recursedown('./docs/executor_tutorial/workflow')
recursedown('./docs/getting_started')
recursedown('./docs/getting_started/img')
recursedown('./docs/project_info')
recursedown('./docs/project_info/img')
recursedown('./docs/snakefiles')
recursedown('./docs/snakefiles/images')
recursedown('./docs/tutorial')
recursedown('./docs/tutorial/workflow')
recursedown('./examples')
recursedown('./examples/c')
recursedown('./examples/c/include')
recursedown('./examples/c/src')
recursedown('./examples/cufflinks')
recursedown('./examples/cufflinks/mapped')
recursedown('./examples/flux')
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recursedown('./examples/hello-world/envs')
recursedown('./examples/hello-world/scripts')
recursedown('./examples/idea')
recursedown('./examples/latex')
recursedown('./examples/mirna')
recursedown('./images')
recursedown('./misc')
recursedown('./misc/nano')
recursedown('./misc/nano/syntax')
recursedown('./misc/vim')
recursedown('./misc/vim/ftdetect')
recursedown('./misc/vim/ftplugin')
recursedown('./misc/vim/ftplugin/snakemake')
recursedown('./misc/vim/syntax')
recursedown('./playground')
recursedown('./playground/iteration')
recursedown('./snakemake')
recursedown('./snakemake/caching')
recursedown('./snakemake/common')
recursedown('./snakemake/deployment')
recursedown('./snakemake/executors')
recursedown('./snakemake/linting')
recursedown('./snakemake/remote')
recursedown('./snakemake/report')
recursedown('./snakemake/report/data')
recursedown('./snakemake/report/template')
recursedown('./snakemake/report/template/components')
recursedown('./snakemake/template_rendering')
recursedown('./snakemake/unit_tests')
recursedown('./snakemake/unit_tests/templates')
recursedown('./tests')
recursedown('./tests/knapsack')
recursedown('./tests/linting')
recursedown('./tests/linting/absolute_paths')
recursedown('./tests/linting/dynamic')
recursedown('./tests/linting/envvars')
recursedown('./tests/linting/iofile_by_index')
recursedown('./tests/linting/log_directive')
recursedown('./tests/linting/long_run')
recursedown('./tests/linting/missing_software_definition')
recursedown('./tests/linting/mixed_func_and_rules')
recursedown('./tests/linting/not_used_params')
recursedown('./tests/linting/params_prefix')
recursedown('./tests/linting/path_add')
recursedown('./tests/linting/singularity')
recursedown('./tests/linting/tab_usage')
recursedown('./tests/linting/version')
recursedown('./tests/profile')
recursedown("./tests/test (with parenthese's)")
recursedown("./tests/test (with parenthese's)/expected-results")
recursedown('./tests/test01')
recursedown('./tests/test01/expected-results')
recursedown('./tests/test01/expected-results/dir')
recursedown('./tests/test02')
recursedown('./tests/test02/expected-results')
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recursedown('./tests/test15')
recursedown('./tests/test15/expected-results')
recursedown('./tests/testHighWorkload')
recursedown('./tests/testHighWorkload/mfa')
recursedown('./tests/test_all_temp')
recursedown('./tests/test_all_temp/expected-results')
recursedown('./tests/test_ancient')
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recursedown('./tests/test_ancient_dag')
recursedown('./tests/test_ancient_dag/expected-results')
recursedown('./tests/test_archive')
recursedown('./tests/test_archive/expected-results')
recursedown('./tests/test_bash')
recursedown('./tests/test_bash/expected-results')
recursedown('./tests/test_batch')
recursedown('./tests/test_batch/expected-results')
recursedown('./tests/test_batch_final')
recursedown('./tests/test_batch_final/expected-results')
recursedown('./tests/test_benchmark')
recursedown('./tests/test_benchmark/expected-results')
recursedown('./tests/test_cache_multioutput')
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recursedown('./tests/test_checkpoint_allowed_rules')
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recursedown('./tests/test_checkpoints')
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recursedown('./tests/test_checkpoints/samples')
recursedown('./tests/test_checkpoints_dir')
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recursedown('./tests/test_cloud_checkpoints_issue574')
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recursedown('./tests/test_cluster_cancelscript')
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recursedown('./tests/test_conda_cmd_exe')
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recursedown('./tests/test_config_merging')
recursedown('./tests/test_config_merging/expected-results')
recursedown('./tests/test_container')
recursedown('./tests/test_container/expected-results')
recursedown('./tests/test_containerized')
recursedown('./tests/test_containerized/expected-results')
recursedown('./tests/test_convert_to_cwl')
recursedown('./tests/test_converting_path_for_r_script')
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recursedown('./tests/test_core_dependent_threads')
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recursedown('./tests/test_cwl')
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recursedown('./tests/test_empty_include')
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recursedown('./tests/test_filesep_windows')
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recursedown('./tests/test_module_input_func')
recursedown('./tests/test_module_input_func/expected-results')
recursedown('./tests/test_module_input_func/expected-results/test')
recursedown('./tests/test_module_input_func/expected-results/test/results')
recursedown('./tests/test_module_input_func/module1')
recursedown('./tests/test_module_local_git')
recursedown('./tests/test_module_local_git/data')
recursedown('./tests/test_module_local_git/expected-results')
recursedown('./tests/test_module_no_prefixing_modified_paths')
recursedown('./tests/test_module_no_prefixing_modified_paths/expected-results')
recursedown('./tests/test_module_no_prefixing_modified_paths/expected-results/module2')
recursedown('./tests/test_module_no_prefixing_modified_paths/module1')
recursedown('./tests/test_module_no_prefixing_modified_paths/module2')
recursedown('./tests/test_module_report')
recursedown('./tests/test_module_report/.snakemake')
recursedown('./tests/test_module_report/.snakemake/metadata')
recursedown('./tests/test_module_report/expected-results')
recursedown('./tests/test_module_report/testdir')
recursedown('./tests/test_module_with_script')
recursedown('./tests/test_module_with_script/expected-results')
recursedown('./tests/test_module_workflow_snakefile_usage')
recursedown('./tests/test_module_workflow_snakefile_usage/config')
recursedown('./tests/test_module_workflow_snakefile_usage/expected-results')
recursedown('./tests/test_module_workflow_snakefile_usage/expected-results/results')
recursedown('./tests/test_module_workflow_snakefile_usage/expected-results/results/testmodule')
recursedown('./tests/test_module_workflow_snakefile_usage/module-test')
recursedown('./tests/test_modules_all')
recursedown('./tests/test_modules_all/config')
recursedown('./tests/test_modules_all/expected-results')
recursedown('./tests/test_modules_all/expected-results/results')
recursedown('./tests/test_modules_all/expected-results/results/testmodule')
recursedown('./tests/test_modules_all/module-test')
recursedown('./tests/test_modules_all_exclude')
recursedown('./tests/test_modules_all_exclude/config')
recursedown('./tests/test_modules_all_exclude/expected-results')
recursedown('./tests/test_modules_all_exclude/expected-results/results')
recursedown('./tests/test_modules_all_exclude/expected-results/results/testmodule')
recursedown('./tests/test_modules_all_exclude/module-test')
recursedown('./tests/test_modules_meta_wrapper')
recursedown('./tests/test_modules_meta_wrapper/expected-results')
recursedown('./tests/test_modules_peppy')
recursedown('./tests/test_modules_peppy/config')
recursedown('./tests/test_modules_peppy/expected-results')
recursedown('./tests/test_modules_peppy/expected-results/foo')
recursedown('./tests/test_modules_peppy/expected-results/foo/results')
recursedown('./tests/test_modules_peppy/module-test')
recursedown('./tests/test_modules_peppy/pep')
recursedown('./tests/test_modules_prefix')
recursedown('./tests/test_modules_prefix/config')
recursedown('./tests/test_modules_prefix/expected-results')
recursedown('./tests/test_modules_prefix/expected-results/foo')
recursedown('./tests/test_modules_prefix/expected-results/foo/results')
recursedown('./tests/test_modules_prefix/module-test')
recursedown('./tests/test_modules_ruledeps_inheritance')
recursedown('./tests/test_modules_ruledeps_inheritance/expected-results')
recursedown('./tests/test_modules_ruledeps_inheritance/module')
recursedown('./tests/test_modules_ruledeps_inheritance/module2')
recursedown('./tests/test_modules_specific')
recursedown('./tests/test_modules_specific/expected-results')
recursedown('./tests/test_modules_specific/module-test')
recursedown('./tests/test_multicomp_group_jobs')
recursedown('./tests/test_multicomp_group_jobs/expected-results')
recursedown('./tests/test_multiext')
recursedown('./tests/test_multiext/expected-results')
recursedown('./tests/test_multiext/expected-results/ref')
recursedown('./tests/test_multiple_includes')
recursedown('./tests/test_multiple_includes/expected-results')
recursedown('./tests/test_name_override')
recursedown('./tests/test_name_override/expected-results')
recursedown('./tests/test_nonstr_params')
recursedown('./tests/test_nonstr_params/expected-results')
recursedown('./tests/test_omitfrom')
recursedown('./tests/test_omitfrom/expected-results')
recursedown('./tests/test_output_file_cache')
recursedown('./tests/test_output_file_cache/cache')
recursedown('./tests/test_output_file_cache/expected-results')
recursedown('./tests/test_output_file_cache/expected-results/cache')
recursedown('./tests/test_output_file_cache_remote')
recursedown('./tests/test_output_file_cache_remote/expected-results')
recursedown('./tests/test_output_file_cache_remote/expected-results/cache')
recursedown('./tests/test_params')
recursedown('./tests/test_params/expected-results')
recursedown('./tests/test_params/expected-results/somedir')
recursedown('./tests/test_paramspace')
recursedown('./tests/test_paramspace/expected-results')
recursedown('./tests/test_paramspace/expected-results/results')
recursedown('./tests/test_paramspace/expected-results/results/default')
recursedown('./tests/test_paramspace/expected-results/results/default/plots')
recursedown('./tests/test_paramspace/expected-results/results/default/plots/alpha~1')
recursedown('./tests/test_paramspace/expected-results/results/default/plots/alpha~1/beta~0.1')
recursedown('./tests/test_paramspace/expected-results/results/default/plots/alpha~2')
recursedown('./tests/test_paramspace/expected-results/results/default/plots/alpha~2/beta~0.0')
recursedown('./tests/test_paramspace/expected-results/results/default/simulations')
recursedown('./tests/test_paramspace/expected-results/results/default/simulations/alpha~1')
recursedown('./tests/test_paramspace/expected-results/results/default/simulations/alpha~1/beta~0.1')
recursedown('./tests/test_paramspace/expected-results/results/default/simulations/alpha~2')
recursedown('./tests/test_paramspace/expected-results/results/default/simulations/alpha~2/beta~0.0')
recursedown('./tests/test_paramspace/expected-results/results/empty')
recursedown('./tests/test_paramspace/expected-results/results/empty/plots')
recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~1')
recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~1/beta~0.1')
recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~2')
recursedown('./tests/test_paramspace/expected-results/results/empty/plots/alpha~2/beta~0.0')
recursedown('./tests/test_paramspace/expected-results/results/empty/simulations')
recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~1')
recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~1/beta~0.1')
recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~2')
recursedown('./tests/test_paramspace/expected-results/results/empty/simulations/alpha~2/beta~0.0')
recursedown('./tests/test_paramspace/expected-results/results/filenamesep')
recursedown('./tests/test_paramspace/expected-results/results/filenamesep/plots')
recursedown('./tests/test_paramspace/expected-results/results/filenamesep/simulations')
recursedown('./tests/test_paramspace/expected-results/results/full')
recursedown('./tests/test_paramspace/expected-results/results/full/plots')
recursedown('./tests/test_paramspace/expected-results/results/full/simulations')
recursedown('./tests/test_paramspace/expected-results/results/full_reorder')
recursedown('./tests/test_paramspace/expected-results/results/full_reorder/plots')
recursedown('./tests/test_paramspace/expected-results/results/full_reorder/simulations')
recursedown('./tests/test_paramspace/expected-results/results/one')
recursedown('./tests/test_paramspace/expected-results/results/one/plots')
recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~1')
recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~1/gamma~0.99')
recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~2')
recursedown('./tests/test_paramspace/expected-results/results/one/plots/alpha~2/gamma~3.9')
recursedown('./tests/test_paramspace/expected-results/results/one/simulations')
recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~1')
recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~1/gamma~0.99')
recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~2')
recursedown('./tests/test_paramspace/expected-results/results/one/simulations/alpha~2/gamma~3.9')
recursedown('./tests/test_paramspace/expected-results/results/sep')
recursedown('./tests/test_paramspace/expected-results/results/sep/plots')
recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_1')
recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_1/beta_is_0.1')
recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_2')
recursedown('./tests/test_paramspace/expected-results/results/sep/plots/alpha_is_2/beta_is_0.0')
recursedown('./tests/test_paramspace/expected-results/results/sep/simulations')
recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_1')
recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_1/beta_is_0.1')
recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_2')
recursedown('./tests/test_paramspace/expected-results/results/sep/simulations/alpha_is_2/beta_is_0.0')
recursedown('./tests/test_paramspace/expected-results/results/sep_and_pattern')
recursedown('./tests/test_paramspace/expected-results/results/sep_and_pattern/plots')
recursedown('./tests/test_paramspace/expected-results/results/sep_and_pattern/simulations')
recursedown('./tests/test_paramspace/expected-results/results/two')
recursedown('./tests/test_paramspace/expected-results/results/two/plots')
recursedown('./tests/test_paramspace/expected-results/results/two/plots/alpha~1')
recursedown('./tests/test_paramspace/expected-results/results/two/plots/alpha~2')
recursedown('./tests/test_paramspace/expected-results/results/two/simulations')
recursedown('./tests/test_paramspace/expected-results/results/two/simulations/alpha~1')
recursedown('./tests/test_paramspace/expected-results/results/two/simulations/alpha~2')
recursedown('./tests/test_paramspace/scripts')
recursedown('./tests/test_parser')
recursedown('./tests/test_parser/expected-results')
recursedown('./tests/test_pathlib')
recursedown('./tests/test_pathlib/expected-results')
recursedown('./tests/test_pathlib/expected-results/outdir')
recursedown('./tests/test_pathlib/expected-results/outdir/function_unpacking')
recursedown('./tests/test_pathlib_missing_file')
recursedown('./tests/test_pathlib_missing_file/expected-results')
recursedown('./tests/test_peppy')
recursedown('./tests/test_peppy/expected-results')
recursedown('./tests/test_peppy/pep')
recursedown('./tests/test_peppy/workflow')
recursedown('./tests/test_peppy/workflow/schemas')
recursedown('./tests/test_persistent_dict')
recursedown('./tests/test_persistent_dict/expected-results')
recursedown('./tests/test_pipe_depend')
recursedown('./tests/test_pipe_depend/expected-results')
recursedown('./tests/test_pipes')
recursedown('./tests/test_pipes/expected-results')
recursedown('./tests/test_pipes2')
recursedown('./tests/test_pipes2/expected-results')
recursedown('./tests/test_pipes_fail')
recursedown('./tests/test_pipes_fail/expected-results')
recursedown('./tests/test_pipes_multiple')
recursedown('./tests/test_pipes_multiple/expected-results')
recursedown('./tests/test_profile')
recursedown('./tests/test_profile/expected-results')
recursedown('./tests/test_protected_symlink_output')
recursedown('./tests/test_protected_symlink_output/expected-results')
recursedown('./tests/test_r_wrapper')
recursedown('./tests/test_remote')
recursedown('./tests/test_remote/expected-results')
recursedown('./tests/test_remote_auto')
recursedown('./tests/test_remote_auto/expected-results')
recursedown('./tests/test_remote_azure')
recursedown('./tests/test_remote_gs')
recursedown('./tests/test_remote_gs/expected-results')
recursedown('./tests/test_remote_http')
recursedown('./tests/test_remote_http/expected-results')
recursedown('./tests/test_remote_irods')
recursedown('./tests/test_remote_irods/expected-results')
recursedown('./tests/test_remote_irods/setup-data')
recursedown('./tests/test_remote_irods/test-data')
recursedown('./tests/test_remote_log')
recursedown('./tests/test_remote_log/expected-results')
recursedown('./tests/test_remote_ncbi')
recursedown('./tests/test_remote_ncbi/expected-results')
recursedown('./tests/test_remote_ncbi_simple')
recursedown('./tests/test_remote_ncbi_simple/expected-results')
recursedown('./tests/test_remote_sftp')
recursedown('./tests/test_remote_sftp/expected-results')
recursedown('./tests/test_remote_zenodo')
recursedown('./tests/test_remote_zenodo/expected-results')
recursedown('./tests/test_report')
recursedown('./tests/test_report/.snakemake')
recursedown('./tests/test_report/.snakemake/metadata')
recursedown('./tests/test_report/data')
recursedown('./tests/test_report/envs')
recursedown('./tests/test_report/expected-results')
recursedown('./tests/test_report/report')
recursedown('./tests/test_report/testdir')
recursedown('./tests/test_report_dir')
recursedown('./tests/test_report_dir/expected-results')
recursedown('./tests/test_report_dir/test')
recursedown('./tests/test_report_dir/test/js')
recursedown('./tests/test_report_display_code')
recursedown('./tests/test_report_display_code/expected-results')
recursedown('./tests/test_report_zip')
recursedown('./tests/test_report_zip/.snakemake')
recursedown('./tests/test_report_zip/.snakemake/metadata')
recursedown('./tests/test_report_zip/data')
recursedown('./tests/test_report_zip/envs')
recursedown('./tests/test_report_zip/expected-results')
recursedown('./tests/test_report_zip/report')
recursedown('./tests/test_report_zip/testdir')
recursedown('./tests/test_restartable_job_cmd_exit_1')
recursedown('./tests/test_restartable_job_cmd_exit_1/expected-results')
recursedown('./tests/test_restartable_job_qsub_exit_1')
recursedown('./tests/test_restartable_job_qsub_exit_1/expected-results')
recursedown('./tests/test_retries')
recursedown('./tests/test_retries/expected-results')
recursedown('./tests/test_rule_defined_in_for_loop')
recursedown('./tests/test_rule_defined_in_for_loop/expected-results')
recursedown('./tests/test_rule_inheritance_globals')
recursedown('./tests/test_rule_inheritance_globals/.snakemake')
recursedown('./tests/test_rule_inheritance_globals/.snakemake/metadata')
recursedown('./tests/test_rule_inheritance_globals/expected-results')
recursedown('./tests/test_ruledag')
recursedown('./tests/test_ruledeps')
recursedown('./tests/test_ruledeps/expected-results')
recursedown('./tests/test_run_namedlist')
recursedown('./tests/test_run_namedlist/expected-results')
recursedown('./tests/test_same_wildcard')
recursedown('./tests/test_same_wildcard/expected-results')
recursedown('./tests/test_scatter_gather')
recursedown('./tests/test_scatter_gather/expected-results')
recursedown('./tests/test_scatter_gather/expected-results/gathered')
recursedown('./tests/test_scatter_gather/expected-results/splitted')
recursedown('./tests/test_scatter_gather_multiple_processes')
recursedown('./tests/test_scatter_gather_multiple_processes/expected-results')
recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/gathered')
recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_a')
recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_b')
recursedown('./tests/test_script')
recursedown('./tests/test_script/envs')
recursedown('./tests/test_script/expected-results')
recursedown('./tests/test_script/scripts')
recursedown('./tests/test_script_py')
recursedown('./tests/test_script_py/expected-results')
recursedown('./tests/test_script_py/scripts')
recursedown('./tests/test_service_jobs')
recursedown('./tests/test_service_jobs/expected-results')
recursedown('./tests/test_set_resources')
recursedown('./tests/test_set_resources/expected-results')
recursedown('./tests/test_shadow')
recursedown('./tests/test_shadow/expected-results')
recursedown('./tests/test_shadow_copy')
recursedown('./tests/test_shadow_copy/expected-results')
recursedown('./tests/test_shadow_prefix')
recursedown('./tests/test_shadow_prefix/expected-results')
recursedown('./tests/test_shadowed_log')
recursedown('./tests/test_shadowed_log/expected-results')
recursedown('./tests/test_shell')
recursedown('./tests/test_shell/expected-results')
recursedown('./tests/test_singularity')
recursedown('./tests/test_singularity/expected-results')
recursedown('./tests/test_singularity_conda')
recursedown('./tests/test_singularity_conda/expected-results')
recursedown('./tests/test_singularity_global')
recursedown('./tests/test_singularity_global/expected-results')
recursedown('./tests/test_singularity_module')
recursedown('./tests/test_singularity_module/expected-results')
recursedown('./tests/test_singularity_none')
recursedown('./tests/test_singularity_none/expected-results')
recursedown('./tests/test_solver')
recursedown('./tests/test_solver/expected-results')
recursedown('./tests/test_source_path')
recursedown('./tests/test_source_path/expected-results')
recursedown('./tests/test_source_path/workflow')
recursedown('./tests/test_source_path/workflow/resources')
recursedown('./tests/test_spaces_in_fnames')
recursedown('./tests/test_spaces_in_fnames/expected-results')
recursedown('./tests/test_speed')
recursedown('./tests/test_srcdir')
recursedown('./tests/test_srcdir/expected-results')
recursedown('./tests/test_static_remote')
recursedown('./tests/test_static_remote/expected-results')
recursedown('./tests/test_strict_mode')
recursedown('./tests/test_strict_mode/expected-results')
recursedown('./tests/test_string_resources')
recursedown('./tests/test_string_resources/expected-results')
recursedown('./tests/test_subworkflow_config')
recursedown('./tests/test_subworkflow_config/expected-results')
recursedown('./tests/test_subworkflows')
recursedown('./tests/test_subworkflows/expected-results')
recursedown('./tests/test_symlink_temp')
recursedown('./tests/test_symlink_temp/expected-results')
recursedown('./tests/test_symlink_time_handling')
recursedown('./tests/test_symlink_time_handling/expected-results')
recursedown('./tests/test_temp')
recursedown('./tests/test_temp/expected-results')
recursedown('./tests/test_temp_expand')
recursedown('./tests/test_temp_expand/expected-results')
recursedown('./tests/test_template_engine')
recursedown('./tests/test_template_engine/expected-results')
recursedown('./tests/test_tes')
recursedown('./tests/test_tes/expected-results')
recursedown('./tests/test_threads')
recursedown('./tests/test_threads/expected-results')
recursedown('./tests/test_threads0')
recursedown('./tests/test_threads0/expected-results')
recursedown('./tests/test_tibanna')
recursedown('./tests/test_tibanna/expected-results')
recursedown('./tests/test_tibanna/scripts')
recursedown('./tests/test_tmpdir')
recursedown('./tests/test_tmpdir/expected-results')
recursedown('./tests/test_touch')
recursedown('./tests/test_touch/expected-results')
recursedown('./tests/test_touch_pipeline_with_temp_dir')
recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results')
recursedown('./tests/test_touch_remote_prefix')
recursedown('./tests/test_touch_remote_prefix/expected-results')
recursedown('./tests/test_unpack_dict')
recursedown('./tests/test_unpack_dict/expected-results')
recursedown('./tests/test_unpack_list')
recursedown('./tests/test_unpack_list/expected-results')
recursedown('./tests/test_until')
recursedown('./tests/test_until/expected-results')
recursedown('./tests/test_update_config')
recursedown('./tests/test_update_config/expected-results')
recursedown('./tests/test_url_include')
recursedown('./tests/test_url_include/expected-results')
recursedown('./tests/test_use_rule_same_module')
recursedown('./tests/test_use_rule_same_module/expected-results')
recursedown('./tests/test_validate')
recursedown('./tests/test_validate/expected-results')
recursedown('./tests/test_wildcard_count_ambiguity')
recursedown('./tests/test_wildcard_count_ambiguity/expected-results')
recursedown('./tests/test_wildcard_keyword')
recursedown('./tests/test_wildcard_keyword/expected-results')
recursedown('./tests/test_wrapper')
recursedown('./tests/test_wrapper/expected-results')
recursedown('./tests/test_xrootd')
recursedown('./tests/test_yaml_config')
recursedown('./tests/test_yaml_config/expected-results')
+ sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py
+ sed -r -i 's@"python"@"/usr/bin/python3"@g' tests/test_linting.py
+ sed -r -i /sphinxcontrib-napoleon/d docs/requirements.txt
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.MEPdHo
+ echo 'latex_engine = '\''xelatex'\'''
+ RPM_EC=0
++ jobs -p
+ exit 0
+ umask 022
+ cd /builddir/build/BUILD
+ cd snakemake-7.18.1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(pip) >= 19'
+ echo 'python3dist(packaging)'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(toml) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ TMPDIR=/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ RPM_TOXENV=py311
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.18.1/pyproject-wheeldir -x reports,messaging,google-cloud docs/requirements.txt
Handling sphinx >=3 from requirements file docs/requirements.txt
Requirement satisfied: sphinx >=3
(installed: sphinx 5.3.0)
Handling sphinx-argparse from requirements file docs/requirements.txt
Requirement satisfied: sphinx-argparse
(installed: sphinx-argparse 0.4.0)
Handling sphinx_rtd_theme from requirements file docs/requirements.txt
Requirement satisfied: sphinx_rtd_theme
(installed: sphinx_rtd_theme 1.1.1)
Handling docutils from requirements file docs/requirements.txt
Requirement satisfied: docutils
(installed: docutils 0.19)
Handling myst-parser from requirements file docs/requirements.txt
Requirement satisfied: myst-parser
(installed: myst-parser 0.18.1)
Handling configargparse from requirements file docs/requirements.txt
Requirement satisfied: configargparse
(installed: configargparse 1.5.3)
Handling appdirs from requirements file docs/requirements.txt
Requirement satisfied: appdirs
(installed: appdirs 1.4.4)
Handling setuptools>=42 from build-system.requires
Requirement satisfied: setuptools>=42
(installed: setuptools 65.5.1)
HOOK STDOUT: running egg_info
HOOK STDOUT: creating snakemake.egg-info
HOOK STDOUT: writing snakemake.egg-info/PKG-INFO
HOOK STDOUT: writing dependency_links to snakemake.egg-info/dependency_links.txt
HOOK STDOUT: writing entry points to snakemake.egg-info/entry_points.txt
HOOK STDOUT: writing requirements to snakemake.egg-info/requires.txt
HOOK STDOUT: writing top-level names to snakemake.egg-info/top_level.txt
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest template 'MANIFEST.in'
HOOK STDOUT: adding license file 'LICENSE.md'
HOOK STDOUT: adding license file 'AUTHORS.rst'
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
Handling wheel from get_requires_for_build_wheel
Requirement satisfied: wheel
(installed: wheel 0.37.1)
HOOK STDOUT: running dist_info
HOOK STDOUT: writing snakemake.egg-info/PKG-INFO
HOOK STDOUT: writing dependency_links to snakemake.egg-info/dependency_links.txt
HOOK STDOUT: writing entry points to snakemake.egg-info/entry_points.txt
HOOK STDOUT: writing requirements to snakemake.egg-info/requires.txt
HOOK STDOUT: writing top-level names to snakemake.egg-info/top_level.txt
HOOK STDOUT: reading manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest template 'MANIFEST.in'
HOOK STDOUT: adding license file 'LICENSE.md'
HOOK STDOUT: adding license file 'AUTHORS.rst'
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: creating '/builddir/build/BUILD/snakemake-7.18.1/snakemake-7.18.1.dist-info'
HOOK STDOUT: adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*")
HOOK STDOUT: adding license file "AUTHORS.rst" (matched pattern "AUTHORS*")
Handling wrapt from hook generated metadata: Requires-Dist
Requirement not satisfied: wrapt
Handling requests from hook generated metadata: Requires-Dist
Requirement satisfied: requests
(installed: requests 2.28.1)
Handling ratelimiter from hook generated metadata: Requires-Dist
Requirement not satisfied: ratelimiter
Handling pyyaml from hook generated metadata: Requires-Dist
Requirement satisfied: pyyaml
(installed: pyyaml 6.0)
Handling configargparse from hook generated metadata: Requires-Dist
Requirement satisfied: configargparse
(installed: configargparse 1.5.3)
Handling appdirs from hook generated metadata: Requires-Dist
Requirement satisfied: appdirs
(installed: appdirs 1.4.4)
Handling datrie from hook generated metadata: Requires-Dist
Requirement not satisfied: datrie
Handling jsonschema from hook generated metadata: Requires-Dist
Requirement not satisfied: jsonschema
Handling docutils from hook generated metadata: Requires-Dist
Requirement satisfied: docutils
(installed: docutils 0.19)
Handling gitpython from hook generated metadata: Requires-Dist
Requirement not satisfied: gitpython
Handling psutil from hook generated metadata: Requires-Dist
Requirement not satisfied: psutil
Handling nbformat from hook generated metadata: Requires-Dist
Requirement not satisfied: nbformat
Handling toposort from hook generated metadata: Requires-Dist
Requirement not satisfied: toposort
Handling connection-pool (>=0.0.3) from hook generated metadata: Requires-Dist
Requirement not satisfied: connection-pool (>=0.0.3)
Handling pulp (>=2.0) from hook generated metadata: Requires-Dist
Requirement not satisfied: pulp (>=2.0)
Handling smart-open (>=3.0) from hook generated metadata: Requires-Dist
Requirement not satisfied: smart-open (>=3.0)
Handling stopit from hook generated metadata: Requires-Dist
Requirement not satisfied: stopit
Handling tabulate from hook generated metadata: Requires-Dist
Requirement not satisfied: tabulate
Handling yte (<2.0,>=1.0) from hook generated metadata: Requires-Dist
Requirement not satisfied: yte (<2.0,>=1.0)
Handling jinja2 (<4.0,>=3.0) from hook generated metadata: Requires-Dist
Requirement satisfied: jinja2 (<4.0,>=3.0)
(installed: jinja2 3.0.3)
Handling reretry from hook generated metadata: Requires-Dist
Requirement not satisfied: reretry
Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement not satisfied: oauth2client ; extra == 'google-cloud'
Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement not satisfied: google-crc32c ; extra == 'google-cloud'
Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement not satisfied: google-api-python-client ; extra == 'google-cloud'
Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement not satisfied: google-cloud-storage ; extra == 'google-cloud'
Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist
Requirement not satisfied: slacker ; extra == 'messaging'
Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist
Ignoring alien requirement: peppy ; extra == 'pep'
Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist
Ignoring alien requirement: eido ; extra == 'pep'
Handling jinja2 ; extra == 'reports' from hook generated metadata: Requires-Dist
Requirement satisfied: jinja2 ; extra == 'reports'
(installed: jinja2 3.0.3)
Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist
Requirement satisfied: pygments ; extra == 'reports'
(installed: pygments 2.13.0)
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/snakemake-7.18.1-1.fc38.buildreqs.nosrc.rpm
INFO: Going to install missing dynamic buildrequires
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 139 kB/s | 3.7 kB 00:00
fedora 70 kB/s | 20 kB 00:00
Package python3-jinja2-3.0.3-6.fc38.noarch is already installed.
Package librsvg2-tools-2.55.1-3.fc38.x86_64 is already installed.
Package texlive-xindy-9:20210325-52.fc38.x86_64 is already installed.
Package latexmk-4.78-1.fc38.noarch is already installed.
Package make-1:4.3-11.fc37.x86_64 is already installed.
Package pyproject-rpm-macros-1.4.0-1.fc38.noarch is already installed.
Package python3-devel-3.11.0-1.fc38.x86_64 is already installed.
Package python3-devel-3.11.0-1.fc38.x86_64 is already installed.
Package python3-sphinx-latex-1:5.3.0-1.fc38.noarch is already installed.
Package python3-appdirs-1.4.4-7.fc38.noarch is already installed.
Package python3-boto3-1.26.25-1.fc38.noarch is already installed.
Package python3-configargparse-1.5.3-3.fc37.noarch is already installed.
Package python3-configargparse-1.5.3-3.fc37.noarch is already installed.
Package python3-docutils-0.19-1.fc38.noarch is already installed.
Package python3-jinja2-3.0.3-6.fc38.noarch is already installed.
Package python3-myst-parser-0.18.1-3.fc38.noarch is already installed.
Package python3-packaging-21.3-7.fc38.noarch is already installed.
Package python3-pandas-1.3.5-2.fc37~bootstrap.x86_64 is already installed.
Package python3-pip-22.3.1-1.fc38.noarch is already installed.
Package python3-pygments-2.13.0-1.fc38.noarch is already installed.
Package python3-pytest-7.2.0-1.fc38.noarch is already installed.
Package python3-pyyaml-6.0-5.fc37.x86_64 is already installed.
Package python3-requests-2.28.1-3.fc38.noarch is already installed.
Package python3-requests-mock-1.9.3-3.fc37.noarch is already installed.
Package python3-setuptools-65.5.1-1.fc38.noarch is already installed.
Package python3-sphinx-1:5.3.0-1.fc38.noarch is already installed.
Package python3-sphinx-argparse-0.4.0-1.fc38.noarch is already installed.
Package python3-sphinx_rtd_theme-1.1.1-1.fc38.noarch is already installed.
Package python3-wheel-1:0.37.1-4.fc37.noarch is already installed.
Package texlive-xetex-9:20210325-52.fc38.x86_64 is already installed.
Dependencies resolved.
================================================================================
Package Arch Version Repo Size
================================================================================
Installing:
python3-GitPython noarch 3.1.27-3.fc37 fedora 380 k
python3-connection_pool noarch 0.0.3-6.fc37 copr_base 17 k
python3-datrie x86_64 0.8.2-7.fc37 fedora 133 k
python3-google-api-client noarch 2:2.68.0-1.fc38 fedora 4.0 M
python3-google-cloud-storage noarch 2.7.0-1.fc38 copr_base 176 k
python3-google-crc32c x86_64 1.1.2-5.fc37 fedora 36 k
python3-jsonschema noarch 4.17.0-1.fc38 copr_base 181 k
python3-nbformat noarch 5.7.0-1.fc38 fedora 153 k
python3-oauth2client noarch 4.1.3-19.fc37 fedora 188 k
python3-psutil x86_64 5.9.2-1.fc38 copr_base 264 k
python3-pulp noarch 2.6.0-4.fc37 fedora 197 k
python3-ratelimiter noarch 1.2.0-9.post0.fc37 copr_base 20 k
python3-reretry noarch 0.11.2-2.fc38 fedora 17 k
python3-slacker noarch 0.14.0-9.fc37 fedora 36 k
python3-smart_open noarch 5.2.1-4.fc37 copr_base 110 k
python3-stopit noarch 1.1.2-5.fc37 copr_base 26 k
python3-tabulate noarch 0.9.0-1.fc38 copr_base 73 k
python3-toposort noarch 1.7-4.fc37 copr_base 20 k
python3-wrapt x86_64 1.14.1-1.fc38 copr_base 65 k
python3-yte noarch 1.5.1-2.fc38 fedora 35 k
Installing dependencies:
abseil-cpp x86_64 20220623.1-2.fc38 fedora 561 k
c-ares x86_64 1.17.2-3.fc37 fedora 105 k
git-core x86_64 2.38.1-3.fc38 fedora 4.2 M
google-crc32c x86_64 1.1.2-4.fc37 fedora 22 k
grpc-data noarch 1.48.1-4.fc38 copr_base 27 k
less x86_64 608-1.fc38 fedora 167 k
libcbor x86_64 0.7.0-8.fc38 fedora 55 k
libedit x86_64 3.1-44.20221030cvs.fc38 fedora 106 k
libfido2 x86_64 1.12.0-2.fc38 fedora 99 k
openssh x86_64 9.0p1-8.fc38 fedora 441 k
openssh-clients x86_64 9.0p1-8.fc38 fedora 718 k
python3-boto noarch 2.49.0-13.fc37 fedora 1.8 M
python3-cachetools noarch 5.2.0-3.fc37 copr_base 38 k
python3-cffi x86_64 1.15.1-3.fc38 copr_base 301 k
python3-cryptography x86_64 37.0.2-5.fc38 fedora 1.2 M
python3-dpath noarch 2.0.6-3.fc37 copr_base 34 k
python3-fasteners noarch 0.18-1.fc38 copr_base 44 k
python3-fastjsonschema noarch 2.16.1-1.fc37 copr_base 59 k
python3-gitdb noarch 4.0.9-4.fc37 fedora 147 k
python3-google-api-core noarch 1:2.10.2-1.fc38 copr_base 175 k
python3-google-auth noarch 1:2.15.0-1.fc38 fedora 262 k
python3-google-auth-httplib2 noarch 0.1.0-4.fc37 fedora 21 k
python3-google-cloud-core noarch 2.3.2-1.fc37 fedora 72 k
python3-google-resumable-media noarch 2.4.0-1.fc38 fedora 93 k
python3-googleapis-common-protos
noarch 1.56.4-2.fc37 fedora 216 k
python3-grpcio x86_64 1.48.1-4.fc38 copr_base 2.2 M
python3-grpcio-status noarch 1.48.1-4.fc38 copr_base 26 k
python3-httplib2 noarch 0.20.4-6.fc37 fedora 143 k
python3-jupyter-core noarch 5.1.0-1.fc38 fedora 144 k
python3-plac noarch 1.3.5-3.fc38 fedora 67 k
python3-platformdirs noarch 2.6.0-1.fc38 copr_base 37 k
python3-ply noarch 3.11-17.fc37 copr_base 134 k
python3-protobuf noarch 3.19.4-6.fc38 copr_base 290 k
python3-pyOpenSSL noarch 21.0.0-4.fc37 copr_base 111 k
python3-pyasn1 noarch 0.4.8-11.fc37 copr_base 175 k
python3-pyasn1-modules noarch 0.4.8-11.fc37 copr_base 273 k
python3-pycparser noarch 2.20-8.fc37 copr_base 146 k
python3-pyrsistent x86_64 0.19.2-2.fc38 fedora 140 k
python3-rsa noarch 4.8-4.fc37 fedora 81 k
python3-smmap noarch 5.0.0-3.fc37 copr_base 57 k
python3-traitlets noarch 5.6.0-1.fc38 copr_base 285 k
python3-uritemplate noarch 4.1.1-3.fc37 copr_base 36 k
re2 x86_64 1:20220601-1.fc38 fedora 194 k
Transaction Summary
================================================================================
Install 63 Packages
Total download size: 21 M
Installed size: 147 M
Downloading Packages:
(1/63): grpc-data-1.48.1-4.fc38.noarch.rpm 471 kB/s | 27 kB 00:00
(2/63): python3-cachetools-5.2.0-3.fc37.noarch. 616 kB/s | 38 kB 00:00
(3/63): python3-cffi-1.15.1-3.fc38.x86_64.rpm 4.3 MB/s | 301 kB 00:00
(4/63): python3-connection_pool-0.0.3-6.fc37.no 376 kB/s | 17 kB 00:00
(5/63): python3-fasteners-0.18-1.fc38.noarch.rp 1.1 MB/s | 44 kB 00:00
(6/63): python3-dpath-2.0.6-3.fc37.noarch.rpm 565 kB/s | 34 kB 00:00
(7/63): python3-google-api-core-2.10.2-1.fc38.n 3.6 MB/s | 175 kB 00:00
(8/63): python3-grpcio-1.48.1-4.fc38.x86_64.rpm 148 MB/s | 2.2 MB 00:00
(9/63): python3-google-cloud-storage-2.7.0-1.fc 3.4 MB/s | 176 kB 00:00
(10/63): python3-grpcio-status-1.48.1-4.fc38.no 5.3 MB/s | 26 kB 00:00
(11/63): python3-platformdirs-2.6.0-1.fc38.noar 18 MB/s | 37 kB 00:00
(12/63): python3-ply-3.11-17.fc37.noarch.rpm 61 MB/s | 134 kB 00:00
(13/63): python3-protobuf-3.19.4-6.fc38.noarch. 61 MB/s | 290 kB 00:00
(14/63): python3-psutil-5.9.2-1.fc38.x86_64.rpm 38 MB/s | 264 kB 00:00
(15/63): python3-pyOpenSSL-21.0.0-4.fc37.noarch 50 MB/s | 111 kB 00:00
(16/63): python3-pyasn1-0.4.8-11.fc37.noarch.rp 53 MB/s | 175 kB 00:00
(17/63): python3-pyasn1-modules-0.4.8-11.fc37.n 41 MB/s | 273 kB 00:00
(18/63): python3-pycparser-2.20-8.fc37.noarch.r 59 MB/s | 146 kB 00:00
(19/63): python3-jsonschema-4.17.0-1.fc38.noarc 4.4 MB/s | 181 kB 00:00
(20/63): python3-fastjsonschema-2.16.1-1.fc37.n 497 kB/s | 59 kB 00:00
(21/63): python3-ratelimiter-1.2.0-9.post0.fc37 1.2 MB/s | 20 kB 00:00
(22/63): python3-smart_open-5.2.1-4.fc37.noarch 2.1 MB/s | 110 kB 00:00
(23/63): python3-smmap-5.0.0-3.fc37.noarch.rpm 1.2 MB/s | 57 kB 00:00
(24/63): python3-tabulate-0.9.0-1.fc38.noarch.r 9.6 MB/s | 73 kB 00:00
(25/63): python3-traitlets-5.6.0-1.fc38.noarch. 7.4 MB/s | 285 kB 00:00
(26/63): python3-uritemplate-4.1.1-3.fc37.noarc 3.6 MB/s | 36 kB 00:00
(27/63): python3-stopit-1.1.2-5.fc37.noarch.rpm 266 kB/s | 26 kB 00:00
(28/63): python3-toposort-1.7-4.fc37.noarch.rpm 356 kB/s | 20 kB 00:00
(29/63): python3-wrapt-1.14.1-1.fc38.x86_64.rpm 1.6 MB/s | 65 kB 00:00
(30/63): c-ares-1.17.2-3.fc37.x86_64.rpm 3.8 MB/s | 105 kB 00:00
(31/63): git-core-2.38.1-3.fc38.x86_64.rpm 234 MB/s | 4.2 MB 00:00
(32/63): less-608-1.fc38.x86_64.rpm 82 MB/s | 167 kB 00:00
(33/63): libcbor-0.7.0-8.fc38.x86_64.rpm 54 MB/s | 55 kB 00:00
(34/63): libedit-3.1-44.20221030cvs.fc38.x86_64 99 MB/s | 106 kB 00:00
(35/63): google-crc32c-1.1.2-4.fc37.x86_64.rpm 1.3 MB/s | 22 kB 00:00
(36/63): libfido2-1.12.0-2.fc38.x86_64.rpm 81 MB/s | 99 kB 00:00
(37/63): openssh-9.0p1-8.fc38.x86_64.rpm 188 MB/s | 441 kB 00:00
(38/63): openssh-clients-9.0p1-8.fc38.x86_64.rp 170 MB/s | 718 kB 00:00
(39/63): python3-GitPython-3.1.27-3.fc37.noarch 105 MB/s | 380 kB 00:00
(40/63): python3-cryptography-37.0.2-5.fc38.x86 230 MB/s | 1.2 MB 00:00
(41/63): python3-boto-2.49.0-13.fc37.noarch.rpm 79 MB/s | 1.8 MB 00:00
(42/63): python3-datrie-0.8.2-7.fc37.x86_64.rpm 8.0 MB/s | 133 kB 00:00
(43/63): python3-gitdb-4.0.9-4.fc37.noarch.rpm 67 MB/s | 147 kB 00:00
(44/63): python3-google-auth-2.15.0-1.fc38.noar 54 MB/s | 262 kB 00:00
(45/63): python3-google-auth-httplib2-0.1.0-4.f 2.1 MB/s | 21 kB 00:00
(46/63): python3-google-api-client-2.68.0-1.fc3 136 MB/s | 4.0 MB 00:00
(47/63): python3-google-cloud-core-2.3.2-1.fc37 5.5 MB/s | 72 kB 00:00
(48/63): python3-google-resumable-media-2.4.0-1 8.8 MB/s | 93 kB 00:00
(49/63): python3-google-crc32c-1.1.2-5.fc37.x86 3.0 MB/s | 36 kB 00:00
(50/63): python3-googleapis-common-protos-1.56. 40 MB/s | 216 kB 00:00
(51/63): python3-httplib2-0.20.4-6.fc37.noarch. 9.5 MB/s | 143 kB 00:00
(52/63): python3-jupyter-core-5.1.0-1.fc38.noar 9.4 MB/s | 144 kB 00:00
(53/63): python3-nbformat-5.7.0-1.fc38.noarch.r 11 MB/s | 153 kB 00:00
(54/63): python3-oauth2client-4.1.3-19.fc37.noa 11 MB/s | 188 kB 00:00
(55/63): abseil-cpp-20220623.1-2.fc38.x86_64.rp 3.1 MB/s | 561 kB 00:00
(56/63): python3-pyrsistent-0.19.2-2.fc38.x86_6 35 MB/s | 140 kB 00:00
(57/63): python3-plac-1.3.5-3.fc38.noarch.rpm 2.8 MB/s | 67 kB 00:00
(58/63): python3-reretry-0.11.2-2.fc38.noarch.r 1.6 MB/s | 17 kB 00:00
(59/63): python3-rsa-4.8-4.fc37.noarch.rpm 20 MB/s | 81 kB 00:00
(60/63): python3-pulp-2.6.0-4.fc37.noarch.rpm 8.7 MB/s | 197 kB 00:00
(61/63): re2-20220601-1.fc38.x86_64.rpm 109 MB/s | 194 kB 00:00
(62/63): python3-slacker-0.14.0-9.fc37.noarch.r 3.0 MB/s | 36 kB 00:00
(63/63): python3-yte-1.5.1-2.fc38.noarch.rpm 2.4 MB/s | 35 kB 00:00
--------------------------------------------------------------------------------
Total 33 MB/s | 21 MB 00:00
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Preparing : 1/1
Installing : python3-httplib2-0.20.4-6.fc37.noarch 1/63
Installing : python3-pyasn1-0.4.8-11.fc37.noarch 2/63
Installing : python3-rsa-4.8-4.fc37.noarch 3/63
Installing : python3-protobuf-3.19.4-6.fc38.noarch 4/63
Installing : python3-googleapis-common-protos-1.56.4-2.fc37.noa 5/63
Installing : python3-pyasn1-modules-0.4.8-11.fc37.noarch 6/63
Installing : python3-traitlets-5.6.0-1.fc38.noarch 7/63
Installing : python3-boto-2.49.0-13.fc37.noarch 8/63
Installing : re2-1:20220601-1.fc38.x86_64 9/63
Installing : python3-pyrsistent-0.19.2-2.fc38.x86_64 10/63
Installing : python3-jsonschema-4.17.0-1.fc38.noarch 11/63
Installing : python3-plac-1.3.5-3.fc38.noarch 12/63
Running scriptlet: openssh-9.0p1-8.fc38.x86_64 13/63
Installing : openssh-9.0p1-8.fc38.x86_64 13/63
Installing : libedit-3.1-44.20221030cvs.fc38.x86_64 14/63
Installing : libcbor-0.7.0-8.fc38.x86_64 15/63
Installing : libfido2-1.12.0-2.fc38.x86_64 16/63
Installing : openssh-clients-9.0p1-8.fc38.x86_64 17/63
Running scriptlet: openssh-clients-9.0p1-8.fc38.x86_64 17/63
Installing : less-608-1.fc38.x86_64 18/63
Installing : git-core-2.38.1-3.fc38.x86_64 19/63
Installing : google-crc32c-1.1.2-4.fc37.x86_64 20/63
Installing : c-ares-1.17.2-3.fc37.x86_64 21/63
Installing : abseil-cpp-20220623.1-2.fc38.x86_64 22/63
Installing : python3-uritemplate-4.1.1-3.fc37.noarch 23/63
Installing : python3-smmap-5.0.0-3.fc37.noarch 24/63
Installing : python3-gitdb-4.0.9-4.fc37.noarch 25/63
Installing : python3-ply-3.11-17.fc37.noarch 26/63
Installing : python3-pycparser-2.20-8.fc37.noarch 27/63
Installing : python3-cffi-1.15.1-3.fc38.x86_64 28/63
Installing : python3-cryptography-37.0.2-5.fc38.x86_64 29/63
Installing : python3-pyOpenSSL-21.0.0-4.fc37.noarch 30/63
Installing : python3-google-crc32c-1.1.2-5.fc37.x86_64 31/63
Installing : python3-google-resumable-media-2.4.0-1.fc38.noarch 32/63
Installing : python3-platformdirs-2.6.0-1.fc38.noarch 33/63
Installing : python3-jupyter-core-5.1.0-1.fc38.noarch 34/63
Installing : python3-fastjsonschema-2.16.1-1.fc37.noarch 35/63
Installing : python3-fasteners-0.18-1.fc38.noarch 36/63
Installing : python3-dpath-2.0.6-3.fc37.noarch 37/63
Installing : python3-cachetools-5.2.0-3.fc37.noarch 38/63
Installing : python3-google-auth-1:2.15.0-1.fc38.noarch 39/63
Installing : python3-google-auth-httplib2-0.1.0-4.fc37.noarch 40/63
Installing : grpc-data-1.48.1-4.fc38.noarch 41/63
Installing : python3-grpcio-1.48.1-4.fc38.x86_64 42/63
Installing : python3-grpcio-status-1.48.1-4.fc38.noarch 43/63
Installing : python3-google-api-core-1:2.10.2-1.fc38.noarch 44/63
Installing : python3-google-cloud-core-2.3.2-1.fc37.noarch 45/63
Installing : python3-google-cloud-storage-2.7.0-1.fc38.noarch 46/63
Installing : python3-google-api-client-2:2.68.0-1.fc38.noarch 47/63
Installing : python3-yte-1.5.1-2.fc38.noarch 48/63
Installing : python3-oauth2client-4.1.3-19.fc37.noarch 49/63
Installing : python3-nbformat-5.7.0-1.fc38.noarch 50/63
Installing : python3-GitPython-3.1.27-3.fc37.noarch 51/63
Installing : python3-smart_open-5.2.1-4.fc37.noarch 52/63
Installing : python3-slacker-0.14.0-9.fc37.noarch 53/63
Installing : python3-reretry-0.11.2-2.fc38.noarch 54/63
Installing : python3-pulp-2.6.0-4.fc37.noarch 55/63
Installing : python3-datrie-0.8.2-7.fc37.x86_64 56/63
Installing : python3-wrapt-1.14.1-1.fc38.x86_64 57/63
Installing : python3-toposort-1.7-4.fc37.noarch 58/63
Installing : python3-tabulate-0.9.0-1.fc38.noarch 59/63
Installing : python3-stopit-1.1.2-5.fc37.noarch 60/63
Installing : python3-ratelimiter-1.2.0-9.post0.fc37.noarch 61/63
Installing : python3-psutil-5.9.2-1.fc38.x86_64 62/63
Installing : python3-connection_pool-0.0.3-6.fc37.noarch 63/63
Running scriptlet: python3-connection_pool-0.0.3-6.fc37.noarch 63/63
Verifying : grpc-data-1.48.1-4.fc38.noarch 1/63
Verifying : python3-cachetools-5.2.0-3.fc37.noarch 2/63
Verifying : python3-cffi-1.15.1-3.fc38.x86_64 3/63
Verifying : python3-connection_pool-0.0.3-6.fc37.noarch 4/63
Verifying : python3-dpath-2.0.6-3.fc37.noarch 5/63
Verifying : python3-fasteners-0.18-1.fc38.noarch 6/63
Verifying : python3-fastjsonschema-2.16.1-1.fc37.noarch 7/63
Verifying : python3-google-api-core-1:2.10.2-1.fc38.noarch 8/63
Verifying : python3-google-cloud-storage-2.7.0-1.fc38.noarch 9/63
Verifying : python3-grpcio-1.48.1-4.fc38.x86_64 10/63
Verifying : python3-grpcio-status-1.48.1-4.fc38.noarch 11/63
Verifying : python3-jsonschema-4.17.0-1.fc38.noarch 12/63
Verifying : python3-platformdirs-2.6.0-1.fc38.noarch 13/63
Verifying : python3-ply-3.11-17.fc37.noarch 14/63
Verifying : python3-protobuf-3.19.4-6.fc38.noarch 15/63
Verifying : python3-psutil-5.9.2-1.fc38.x86_64 16/63
Verifying : python3-pyOpenSSL-21.0.0-4.fc37.noarch 17/63
Verifying : python3-pyasn1-0.4.8-11.fc37.noarch 18/63
Verifying : python3-pyasn1-modules-0.4.8-11.fc37.noarch 19/63
Verifying : python3-pycparser-2.20-8.fc37.noarch 20/63
Verifying : python3-ratelimiter-1.2.0-9.post0.fc37.noarch 21/63
Verifying : python3-smart_open-5.2.1-4.fc37.noarch 22/63
Verifying : python3-smmap-5.0.0-3.fc37.noarch 23/63
Verifying : python3-stopit-1.1.2-5.fc37.noarch 24/63
Verifying : python3-tabulate-0.9.0-1.fc38.noarch 25/63
Verifying : python3-toposort-1.7-4.fc37.noarch 26/63
Verifying : python3-traitlets-5.6.0-1.fc38.noarch 27/63
Verifying : python3-uritemplate-4.1.1-3.fc37.noarch 28/63
Verifying : python3-wrapt-1.14.1-1.fc38.x86_64 29/63
Verifying : abseil-cpp-20220623.1-2.fc38.x86_64 30/63
Verifying : c-ares-1.17.2-3.fc37.x86_64 31/63
Verifying : git-core-2.38.1-3.fc38.x86_64 32/63
Verifying : google-crc32c-1.1.2-4.fc37.x86_64 33/63
Verifying : less-608-1.fc38.x86_64 34/63
Verifying : libcbor-0.7.0-8.fc38.x86_64 35/63
Verifying : libedit-3.1-44.20221030cvs.fc38.x86_64 36/63
Verifying : libfido2-1.12.0-2.fc38.x86_64 37/63
Verifying : openssh-9.0p1-8.fc38.x86_64 38/63
Verifying : openssh-clients-9.0p1-8.fc38.x86_64 39/63
Verifying : python3-GitPython-3.1.27-3.fc37.noarch 40/63
Verifying : python3-boto-2.49.0-13.fc37.noarch 41/63
Verifying : python3-cryptography-37.0.2-5.fc38.x86_64 42/63
Verifying : python3-datrie-0.8.2-7.fc37.x86_64 43/63
Verifying : python3-gitdb-4.0.9-4.fc37.noarch 44/63
Verifying : python3-google-api-client-2:2.68.0-1.fc38.noarch 45/63
Verifying : python3-google-auth-1:2.15.0-1.fc38.noarch 46/63
Verifying : python3-google-auth-httplib2-0.1.0-4.fc37.noarch 47/63
Verifying : python3-google-cloud-core-2.3.2-1.fc37.noarch 48/63
Verifying : python3-google-crc32c-1.1.2-5.fc37.x86_64 49/63
Verifying : python3-google-resumable-media-2.4.0-1.fc38.noarch 50/63
Verifying : python3-googleapis-common-protos-1.56.4-2.fc37.noa 51/63
Verifying : python3-httplib2-0.20.4-6.fc37.noarch 52/63
Verifying : python3-jupyter-core-5.1.0-1.fc38.noarch 53/63
Verifying : python3-nbformat-5.7.0-1.fc38.noarch 54/63
Verifying : python3-oauth2client-4.1.3-19.fc37.noarch 55/63
Verifying : python3-plac-1.3.5-3.fc38.noarch 56/63
Verifying : python3-pulp-2.6.0-4.fc37.noarch 57/63
Verifying : python3-pyrsistent-0.19.2-2.fc38.x86_64 58/63
Verifying : python3-reretry-0.11.2-2.fc38.noarch 59/63
Verifying : python3-rsa-4.8-4.fc37.noarch 60/63
Verifying : python3-slacker-0.14.0-9.fc37.noarch 61/63
Verifying : python3-yte-1.5.1-2.fc38.noarch 62/63
Verifying : re2-1:20220601-1.fc38.x86_64 63/63
Installed:
abseil-cpp-20220623.1-2.fc38.x86_64
c-ares-1.17.2-3.fc37.x86_64
git-core-2.38.1-3.fc38.x86_64
google-crc32c-1.1.2-4.fc37.x86_64
grpc-data-1.48.1-4.fc38.noarch
less-608-1.fc38.x86_64
libcbor-0.7.0-8.fc38.x86_64
libedit-3.1-44.20221030cvs.fc38.x86_64
libfido2-1.12.0-2.fc38.x86_64
openssh-9.0p1-8.fc38.x86_64
openssh-clients-9.0p1-8.fc38.x86_64
python3-GitPython-3.1.27-3.fc37.noarch
python3-boto-2.49.0-13.fc37.noarch
python3-cachetools-5.2.0-3.fc37.noarch
python3-cffi-1.15.1-3.fc38.x86_64
python3-connection_pool-0.0.3-6.fc37.noarch
python3-cryptography-37.0.2-5.fc38.x86_64
python3-datrie-0.8.2-7.fc37.x86_64
python3-dpath-2.0.6-3.fc37.noarch
python3-fasteners-0.18-1.fc38.noarch
python3-fastjsonschema-2.16.1-1.fc37.noarch
python3-gitdb-4.0.9-4.fc37.noarch
python3-google-api-client-2:2.68.0-1.fc38.noarch
python3-google-api-core-1:2.10.2-1.fc38.noarch
python3-google-auth-1:2.15.0-1.fc38.noarch
python3-google-auth-httplib2-0.1.0-4.fc37.noarch
python3-google-cloud-core-2.3.2-1.fc37.noarch
python3-google-cloud-storage-2.7.0-1.fc38.noarch
python3-google-crc32c-1.1.2-5.fc37.x86_64
python3-google-resumable-media-2.4.0-1.fc38.noarch
python3-googleapis-common-protos-1.56.4-2.fc37.noarch
python3-grpcio-1.48.1-4.fc38.x86_64
python3-grpcio-status-1.48.1-4.fc38.noarch
python3-httplib2-0.20.4-6.fc37.noarch
python3-jsonschema-4.17.0-1.fc38.noarch
python3-jupyter-core-5.1.0-1.fc38.noarch
python3-nbformat-5.7.0-1.fc38.noarch
python3-oauth2client-4.1.3-19.fc37.noarch
python3-plac-1.3.5-3.fc38.noarch
python3-platformdirs-2.6.0-1.fc38.noarch
python3-ply-3.11-17.fc37.noarch
python3-protobuf-3.19.4-6.fc38.noarch
python3-psutil-5.9.2-1.fc38.x86_64
python3-pulp-2.6.0-4.fc37.noarch
python3-pyOpenSSL-21.0.0-4.fc37.noarch
python3-pyasn1-0.4.8-11.fc37.noarch
python3-pyasn1-modules-0.4.8-11.fc37.noarch
python3-pycparser-2.20-8.fc37.noarch
python3-pyrsistent-0.19.2-2.fc38.x86_64
python3-ratelimiter-1.2.0-9.post0.fc37.noarch
python3-reretry-0.11.2-2.fc38.noarch
python3-rsa-4.8-4.fc37.noarch
python3-slacker-0.14.0-9.fc37.noarch
python3-smart_open-5.2.1-4.fc37.noarch
python3-smmap-5.0.0-3.fc37.noarch
python3-stopit-1.1.2-5.fc37.noarch
python3-tabulate-0.9.0-1.fc38.noarch
python3-toposort-1.7-4.fc37.noarch
python3-traitlets-5.6.0-1.fc38.noarch
python3-uritemplate-4.1.1-3.fc37.noarch
python3-wrapt-1.14.1-1.fc38.x86_64
python3-yte-1.5.1-2.fc38.noarch
re2-1:20220601-1.fc38.x86_64
Complete!
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1670457600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.s2MeOU
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf snakemake-7.18.1
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-7.18.1.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd snakemake-7.18.1
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/snakemake-7.11.0-docs-no-animated-demo.patch
+ '[' -z sP ']'
+ shebang_flags=-kasP
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP .
recursedown('.')
recursedown('./.github')
recursedown('./.github/ISSUE_TEMPLATE')
recursedown('./.github/workflows')
recursedown('./docs')
recursedown('./docs/_static')
recursedown('./docs/apidocs')
recursedown('./docs/apidocs/api_reference')
recursedown('./docs/apidocs/api_reference/internal')
recursedown('./docs/executing')
recursedown('./docs/executor_tutorial')
recursedown('./docs/executor_tutorial/workflow')
recursedown('./docs/getting_started')
recursedown('./docs/getting_started/img')
recursedown('./docs/project_info')
recursedown('./docs/project_info/img')
recursedown('./docs/snakefiles')
recursedown('./docs/snakefiles/images')
recursedown('./docs/tutorial')
recursedown('./docs/tutorial/workflow')
recursedown('./examples')
recursedown('./examples/c')
recursedown('./examples/c/include')
recursedown('./examples/c/src')
recursedown('./examples/cufflinks')
recursedown('./examples/cufflinks/mapped')
recursedown('./examples/flux')
recursedown('./examples/hello-world')
recursedown('./examples/hello-world/envs')
recursedown('./examples/hello-world/scripts')
recursedown('./examples/idea')
recursedown('./examples/latex')
recursedown('./examples/mirna')
recursedown('./images')
recursedown('./misc')
recursedown('./misc/nano')
recursedown('./misc/nano/syntax')
recursedown('./misc/vim')
recursedown('./misc/vim/ftdetect')
recursedown('./misc/vim/ftplugin')
recursedown('./misc/vim/ftplugin/snakemake')
recursedown('./misc/vim/syntax')
recursedown('./playground')
recursedown('./playground/iteration')
recursedown('./snakemake')
recursedown('./snakemake/caching')
recursedown('./snakemake/common')
recursedown('./snakemake/deployment')
recursedown('./snakemake/executors')
recursedown('./snakemake/linting')
recursedown('./snakemake/remote')
recursedown('./snakemake/report')
recursedown('./snakemake/report/data')
recursedown('./snakemake/report/template')
recursedown('./snakemake/report/template/components')
recursedown('./snakemake/template_rendering')
recursedown('./snakemake/unit_tests')
recursedown('./snakemake/unit_tests/templates')
recursedown('./tests')
recursedown('./tests/knapsack')
recursedown('./tests/linting')
recursedown('./tests/linting/absolute_paths')
recursedown('./tests/linting/dynamic')
recursedown('./tests/linting/envvars')
recursedown('./tests/linting/iofile_by_index')
recursedown('./tests/linting/log_directive')
recursedown('./tests/linting/long_run')
recursedown('./tests/linting/missing_software_definition')
recursedown('./tests/linting/mixed_func_and_rules')
recursedown('./tests/linting/not_used_params')
recursedown('./tests/linting/params_prefix')
recursedown('./tests/linting/path_add')
recursedown('./tests/linting/singularity')
recursedown('./tests/linting/tab_usage')
recursedown('./tests/linting/version')
recursedown('./tests/profile')
recursedown("./tests/test (with parenthese's)")
recursedown("./tests/test (with parenthese's)/expected-results")
recursedown('./tests/test01')
recursedown('./tests/test01/expected-results')
recursedown('./tests/test01/expected-results/dir')
recursedown('./tests/test02')
recursedown('./tests/test02/expected-results')
recursedown('./tests/test03')
recursedown('./tests/test03/expected-results')
recursedown('./tests/test04')
recursedown('./tests/test04/expected-results')
recursedown('./tests/test05')
recursedown('./tests/test05/expected-results')
recursedown('./tests/test06')
recursedown('./tests/test06/expected-results')
recursedown('./tests/test07')
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recursedown('./tests/test08')
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recursedown('./tests/test09')
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recursedown('./tests/test10')
recursedown('./tests/test10/expected-results')
recursedown('./tests/test11')
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recursedown('./tests/test12')
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recursedown('./tests/test14')
recursedown('./tests/test14/expected-results')
recursedown('./tests/test15')
recursedown('./tests/test15/expected-results')
recursedown('./tests/testHighWorkload')
recursedown('./tests/testHighWorkload/mfa')
recursedown('./tests/test_all_temp')
recursedown('./tests/test_all_temp/expected-results')
recursedown('./tests/test_ancient')
recursedown('./tests/test_ancient/expected-results')
recursedown('./tests/test_ancient_dag')
recursedown('./tests/test_ancient_dag/expected-results')
recursedown('./tests/test_archive')
recursedown('./tests/test_archive/expected-results')
recursedown('./tests/test_bash')
recursedown('./tests/test_bash/expected-results')
recursedown('./tests/test_batch')
recursedown('./tests/test_batch/expected-results')
recursedown('./tests/test_batch_final')
recursedown('./tests/test_batch_final/expected-results')
recursedown('./tests/test_benchmark')
recursedown('./tests/test_benchmark/expected-results')
recursedown('./tests/test_cache_multioutput')
recursedown('./tests/test_cache_multioutput/expected-results')
recursedown('./tests/test_checkpoint_allowed_rules')
recursedown('./tests/test_checkpoint_allowed_rules/expected-results')
recursedown('./tests/test_checkpoints')
recursedown('./tests/test_checkpoints/expected-results')
recursedown('./tests/test_checkpoints/expected-results/aggregated')
recursedown('./tests/test_checkpoints/samples')
recursedown('./tests/test_checkpoints_dir')
recursedown('./tests/test_checkpoints_dir/expected-results')
recursedown('./tests/test_checkpoints_dir/expected-results/aggregated')
recursedown('./tests/test_checkpoints_dir/samples')
recursedown('./tests/test_cloud_checkpoints_issue574')
recursedown('./tests/test_cloud_checkpoints_issue574/expected-results')
recursedown('./tests/test_cluster_cancelscript')
recursedown('./tests/test_cluster_cancelscript/expected-results')
recursedown('./tests/test_cluster_sidecar')
recursedown('./tests/test_cluster_sidecar/expected-results')
recursedown('./tests/test_cluster_statusscript')
recursedown('./tests/test_cluster_statusscript/expected-results')
recursedown('./tests/test_cluster_statusscript_multi')
recursedown('./tests/test_cluster_statusscript_multi/expected-results')
recursedown('./tests/test_conda')
recursedown('./tests/test_conda/expected-results')
recursedown('./tests/test_conda_cmd_exe')
recursedown('./tests/test_conda_cmd_exe/expected-results')
recursedown('./tests/test_conda_custom_prefix')
recursedown('./tests/test_conda_custom_prefix/expected-results')
recursedown('./tests/test_conda_function')
recursedown('./tests/test_conda_function/expected-results')
recursedown('./tests/test_conda_named')
recursedown('./tests/test_conda_named/expected-results')
recursedown('./tests/test_conda_pin_file')
recursedown('./tests/test_conda_pin_file/expected-results')
recursedown('./tests/test_conda_python_script')
recursedown('./tests/test_conda_python_script/expected-results')
recursedown('./tests/test_conditional')
recursedown('./tests/test_conditional/expected-results')
recursedown('./tests/test_config')
recursedown('./tests/test_config/expected-results')
recursedown('./tests/test_config_merging')
recursedown('./tests/test_config_merging/expected-results')
recursedown('./tests/test_container')
recursedown('./tests/test_container/expected-results')
recursedown('./tests/test_containerized')
recursedown('./tests/test_containerized/expected-results')
recursedown('./tests/test_convert_to_cwl')
recursedown('./tests/test_converting_path_for_r_script')
recursedown('./tests/test_converting_path_for_r_script/expected-results')
recursedown('./tests/test_core_dependent_threads')
recursedown('./tests/test_core_dependent_threads/expected-results')
recursedown('./tests/test_cwl')
recursedown('./tests/test_cwl/expected-results')
recursedown('./tests/test_default_remote')
recursedown('./tests/test_default_remote/expected-results')
recursedown('./tests/test_default_resources')
recursedown('./tests/test_default_resources/expected-results')
recursedown('./tests/test_default_target')
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recursedown('./tests/test_deferred_func_eval')
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recursedown('./tests/test_delete_all_output')
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+ sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py
+ sed -r -i 's@"python"@"/usr/bin/python3"@g' tests/test_linting.py
+ sed -r -i /sphinxcontrib-napoleon/d docs/requirements.txt
+ echo 'latex_engine = '\''xelatex'\'''
+ RPM_EC=0
++ jobs -p
+ exit 0
+ umask 022
+ cd /builddir/build/BUILD
+ cd snakemake-7.18.1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(pip) >= 19'
+ echo 'python3dist(packaging)'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(toml) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ TMPDIR=/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ RPM_TOXENV=py311
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.18.1/pyproject-wheeldir -x reports,messaging,google-cloud docs/requirements.txt
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Aq4xrT
Handling sphinx >=3 from requirements file docs/requirements.txt
Requirement satisfied: sphinx >=3
(installed: sphinx 5.3.0)
Handling sphinx-argparse from requirements file docs/requirements.txt
Requirement satisfied: sphinx-argparse
(installed: sphinx-argparse 0.4.0)
Handling sphinx_rtd_theme from requirements file docs/requirements.txt
Requirement satisfied: sphinx_rtd_theme
(installed: sphinx_rtd_theme 1.1.1)
Handling docutils from requirements file docs/requirements.txt
Requirement satisfied: docutils
(installed: docutils 0.19)
Handling myst-parser from requirements file docs/requirements.txt
Requirement satisfied: myst-parser
(installed: myst-parser 0.18.1)
Handling configargparse from requirements file docs/requirements.txt
Requirement satisfied: configargparse
(installed: configargparse 1.5.3)
Handling appdirs from requirements file docs/requirements.txt
Requirement satisfied: appdirs
(installed: appdirs 1.4.4)
Handling setuptools>=42 from build-system.requires
Requirement satisfied: setuptools>=42
(installed: setuptools 65.5.1)
HOOK STDOUT: running egg_info
HOOK STDOUT: creating snakemake.egg-info
HOOK STDOUT: writing snakemake.egg-info/PKG-INFO
HOOK STDOUT: writing dependency_links to snakemake.egg-info/dependency_links.txt
HOOK STDOUT: writing entry points to snakemake.egg-info/entry_points.txt
HOOK STDOUT: writing requirements to snakemake.egg-info/requires.txt
HOOK STDOUT: writing top-level names to snakemake.egg-info/top_level.txt
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest template 'MANIFEST.in'
HOOK STDOUT: adding license file 'LICENSE.md'
HOOK STDOUT: adding license file 'AUTHORS.rst'
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
Handling wheel from get_requires_for_build_wheel
Requirement satisfied: wheel
(installed: wheel 0.37.1)
HOOK STDOUT: running dist_info
HOOK STDOUT: writing snakemake.egg-info/PKG-INFO
HOOK STDOUT: writing dependency_links to snakemake.egg-info/dependency_links.txt
HOOK STDOUT: writing entry points to snakemake.egg-info/entry_points.txt
HOOK STDOUT: writing requirements to snakemake.egg-info/requires.txt
HOOK STDOUT: writing top-level names to snakemake.egg-info/top_level.txt
HOOK STDOUT: reading manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest template 'MANIFEST.in'
HOOK STDOUT: adding license file 'LICENSE.md'
HOOK STDOUT: adding license file 'AUTHORS.rst'
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: creating '/builddir/build/BUILD/snakemake-7.18.1/snakemake-7.18.1.dist-info'
HOOK STDOUT: adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*")
HOOK STDOUT: adding license file "AUTHORS.rst" (matched pattern "AUTHORS*")
Handling wrapt from hook generated metadata: Requires-Dist
Requirement satisfied: wrapt
(installed: wrapt 1.14.1)
Handling requests from hook generated metadata: Requires-Dist
Requirement satisfied: requests
(installed: requests 2.28.1)
Handling ratelimiter from hook generated metadata: Requires-Dist
Requirement satisfied: ratelimiter
(installed: ratelimiter 1.2.0.post0)
Handling pyyaml from hook generated metadata: Requires-Dist
Requirement satisfied: pyyaml
(installed: pyyaml 6.0)
Handling configargparse from hook generated metadata: Requires-Dist
Requirement satisfied: configargparse
(installed: configargparse 1.5.3)
Handling appdirs from hook generated metadata: Requires-Dist
Requirement satisfied: appdirs
(installed: appdirs 1.4.4)
Handling datrie from hook generated metadata: Requires-Dist
Requirement satisfied: datrie
(installed: datrie 0.8.2)
Handling jsonschema from hook generated metadata: Requires-Dist
Requirement satisfied: jsonschema
(installed: jsonschema 4.17.0)
Handling docutils from hook generated metadata: Requires-Dist
Requirement satisfied: docutils
(installed: docutils 0.19)
Handling gitpython from hook generated metadata: Requires-Dist
Requirement satisfied: gitpython
(installed: gitpython 3.1.27)
Handling psutil from hook generated metadata: Requires-Dist
Requirement satisfied: psutil
(installed: psutil 5.9.2)
Handling nbformat from hook generated metadata: Requires-Dist
Requirement satisfied: nbformat
(installed: nbformat 5.7.0)
Handling toposort from hook generated metadata: Requires-Dist
Requirement satisfied: toposort
(installed: toposort 1.7)
Handling connection-pool (>=0.0.3) from hook generated metadata: Requires-Dist
Requirement satisfied: connection-pool (>=0.0.3)
(installed: connection-pool 0.0.3)
Handling pulp (>=2.0) from hook generated metadata: Requires-Dist
Requirement satisfied: pulp (>=2.0)
(installed: pulp 2.6.0)
Handling smart-open (>=3.0) from hook generated metadata: Requires-Dist
Requirement satisfied: smart-open (>=3.0)
(installed: smart-open 5.2.1)
Handling stopit from hook generated metadata: Requires-Dist
Requirement satisfied: stopit
(installed: stopit 1.1.2)
Handling tabulate from hook generated metadata: Requires-Dist
Requirement satisfied: tabulate
(installed: tabulate 0.9.0)
Handling yte (<2.0,>=1.0) from hook generated metadata: Requires-Dist
Requirement satisfied: yte (<2.0,>=1.0)
(installed: yte 1.5.1)
Handling jinja2 (<4.0,>=3.0) from hook generated metadata: Requires-Dist
Requirement satisfied: jinja2 (<4.0,>=3.0)
(installed: jinja2 3.0.3)
Handling reretry from hook generated metadata: Requires-Dist
Requirement satisfied: reretry
(installed: reretry 0.11.2)
Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement satisfied: oauth2client ; extra == 'google-cloud'
(installed: oauth2client 4.1.3)
Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement satisfied: google-crc32c ; extra == 'google-cloud'
(installed: google-crc32c 1.1.2)
Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement satisfied: google-api-python-client ; extra == 'google-cloud'
(installed: google-api-python-client 2.68.0)
Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement satisfied: google-cloud-storage ; extra == 'google-cloud'
(installed: google-cloud-storage 2.7.0)
Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist
Requirement satisfied: slacker ; extra == 'messaging'
(installed: slacker 0.14.0)
Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist
Ignoring alien requirement: peppy ; extra == 'pep'
Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist
Ignoring alien requirement: eido ; extra == 'pep'
Handling jinja2 ; extra == 'reports' from hook generated metadata: Requires-Dist
Requirement satisfied: jinja2 ; extra == 'reports'
(installed: jinja2 3.0.3)
Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist
Requirement satisfied: pygments ; extra == 'reports'
(installed: pygments 2.13.0)
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/snakemake-7.18.1-1.fc38.buildreqs.nosrc.rpm
INFO: Going to install missing dynamic buildrequires
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 128 kB/s | 3.7 kB 00:00
fedora 70 kB/s | 20 kB 00:00
Package python3-jinja2-3.0.3-6.fc38.noarch is already installed.
Package python3-yte-1.5.1-2.fc38.noarch is already installed.
Package librsvg2-tools-2.55.1-3.fc38.x86_64 is already installed.
Package texlive-xindy-9:20210325-52.fc38.x86_64 is already installed.
Package latexmk-4.78-1.fc38.noarch is already installed.
Package make-1:4.3-11.fc37.x86_64 is already installed.
Package pyproject-rpm-macros-1.4.0-1.fc38.noarch is already installed.
Package python3-devel-3.11.0-1.fc38.x86_64 is already installed.
Package python3-devel-3.11.0-1.fc38.x86_64 is already installed.
Package python3-sphinx-latex-1:5.3.0-1.fc38.noarch is already installed.
Package python3-appdirs-1.4.4-7.fc38.noarch is already installed.
Package python3-boto3-1.26.25-1.fc38.noarch is already installed.
Package python3-configargparse-1.5.3-3.fc37.noarch is already installed.
Package python3-configargparse-1.5.3-3.fc37.noarch is already installed.
Package python3-connection_pool-0.0.3-6.fc37.noarch is already installed.
Package python3-datrie-0.8.2-7.fc37.x86_64 is already installed.
Package python3-docutils-0.19-1.fc38.noarch is already installed.
Package python3-GitPython-3.1.27-3.fc37.noarch is already installed.
Package python3-google-api-client-2:2.68.0-1.fc38.noarch is already installed.
Package python3-google-cloud-storage-2.7.0-1.fc38.noarch is already installed.
Package python3-google-crc32c-1.1.2-5.fc37.x86_64 is already installed.
Package python3-jinja2-3.0.3-6.fc38.noarch is already installed.
Package python3-jsonschema-4.17.0-1.fc38.noarch is already installed.
Package python3-myst-parser-0.18.1-3.fc38.noarch is already installed.
Package python3-nbformat-5.7.0-1.fc38.noarch is already installed.
Package python3-oauth2client-4.1.3-19.fc37.noarch is already installed.
Package python3-packaging-21.3-7.fc38.noarch is already installed.
Package python3-pandas-1.3.5-2.fc37~bootstrap.x86_64 is already installed.
Package python3-pip-22.3.1-1.fc38.noarch is already installed.
Package python3-psutil-5.9.2-1.fc38.x86_64 is already installed.
Package python3-pulp-2.6.0-4.fc37.noarch is already installed.
Package python3-pygments-2.13.0-1.fc38.noarch is already installed.
Package python3-pytest-7.2.0-1.fc38.noarch is already installed.
Package python3-pyyaml-6.0-5.fc37.x86_64 is already installed.
Package python3-ratelimiter-1.2.0-9.post0.fc37.noarch is already installed.
Package python3-requests-2.28.1-3.fc38.noarch is already installed.
Package python3-requests-mock-1.9.3-3.fc37.noarch is already installed.
Package python3-reretry-0.11.2-2.fc38.noarch is already installed.
Package python3-setuptools-65.5.1-1.fc38.noarch is already installed.
Package python3-slacker-0.14.0-9.fc37.noarch is already installed.
Package python3-smart_open-5.2.1-4.fc37.noarch is already installed.
Package python3-sphinx-1:5.3.0-1.fc38.noarch is already installed.
Package python3-sphinx-argparse-0.4.0-1.fc38.noarch is already installed.
Package python3-sphinx_rtd_theme-1.1.1-1.fc38.noarch is already installed.
Package python3-stopit-1.1.2-5.fc37.noarch is already installed.
Package python3-tabulate-0.9.0-1.fc38.noarch is already installed.
Package python3-toposort-1.7-4.fc37.noarch is already installed.
Package python3-wheel-1:0.37.1-4.fc37.noarch is already installed.
Package python3-wrapt-1.14.1-1.fc38.x86_64 is already installed.
Package texlive-xetex-9:20210325-52.fc38.x86_64 is already installed.
Dependencies resolved.
Nothing to do.
Complete!
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1670457600
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.4Z7Ibz
+ umask 022
+ cd /builddir/build/BUILD
+ cd snakemake-7.18.1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(pip) >= 19'
+ echo 'python3dist(packaging)'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(toml) if python3-devel < 3.11)'
+ rm -rfv snakemake-7.18.1.dist-info/
removed 'snakemake-7.18.1.dist-info/AUTHORS.rst'
removed 'snakemake-7.18.1.dist-info/LICENSE.md'
removed 'snakemake-7.18.1.dist-info/METADATA'
removed 'snakemake-7.18.1.dist-info/entry_points.txt'
removed 'snakemake-7.18.1.dist-info/top_level.txt'
removed directory 'snakemake-7.18.1.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 '
+ TMPDIR=/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ RPM_TOXENV=py311
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.18.1/pyproject-wheeldir -x reports,messaging,google-cloud docs/requirements.txt
Handling sphinx >=3 from requirements file docs/requirements.txt
Requirement satisfied: sphinx >=3
(installed: sphinx 5.3.0)
Handling sphinx-argparse from requirements file docs/requirements.txt
Requirement satisfied: sphinx-argparse
(installed: sphinx-argparse 0.4.0)
Handling sphinx_rtd_theme from requirements file docs/requirements.txt
Requirement satisfied: sphinx_rtd_theme
(installed: sphinx_rtd_theme 1.1.1)
Handling docutils from requirements file docs/requirements.txt
Requirement satisfied: docutils
(installed: docutils 0.19)
Handling myst-parser from requirements file docs/requirements.txt
Requirement satisfied: myst-parser
(installed: myst-parser 0.18.1)
Handling configargparse from requirements file docs/requirements.txt
Requirement satisfied: configargparse
(installed: configargparse 1.5.3)
Handling appdirs from requirements file docs/requirements.txt
Requirement satisfied: appdirs
(installed: appdirs 1.4.4)
Handling setuptools>=42 from build-system.requires
Requirement satisfied: setuptools>=42
(installed: setuptools 65.5.1)
HOOK STDOUT: running egg_info
HOOK STDOUT: writing snakemake.egg-info/PKG-INFO
HOOK STDOUT: writing dependency_links to snakemake.egg-info/dependency_links.txt
HOOK STDOUT: writing entry points to snakemake.egg-info/entry_points.txt
HOOK STDOUT: writing requirements to snakemake.egg-info/requires.txt
HOOK STDOUT: writing top-level names to snakemake.egg-info/top_level.txt
HOOK STDOUT: reading manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest template 'MANIFEST.in'
HOOK STDOUT: adding license file 'LICENSE.md'
HOOK STDOUT: adding license file 'AUTHORS.rst'
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
Handling wheel from get_requires_for_build_wheel
Requirement satisfied: wheel
(installed: wheel 0.37.1)
HOOK STDOUT: running dist_info
HOOK STDOUT: writing snakemake.egg-info/PKG-INFO
HOOK STDOUT: writing dependency_links to snakemake.egg-info/dependency_links.txt
HOOK STDOUT: writing entry points to snakemake.egg-info/entry_points.txt
HOOK STDOUT: writing requirements to snakemake.egg-info/requires.txt
HOOK STDOUT: writing top-level names to snakemake.egg-info/top_level.txt
HOOK STDOUT: reading manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: reading manifest template 'MANIFEST.in'
HOOK STDOUT: adding license file 'LICENSE.md'
HOOK STDOUT: adding license file 'AUTHORS.rst'
HOOK STDOUT: writing manifest file 'snakemake.egg-info/SOURCES.txt'
HOOK STDOUT: creating '/builddir/build/BUILD/snakemake-7.18.1/snakemake-7.18.1.dist-info'
HOOK STDOUT: adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*")
HOOK STDOUT: adding license file "AUTHORS.rst" (matched pattern "AUTHORS*")
Handling wrapt from hook generated metadata: Requires-Dist
Requirement satisfied: wrapt
(installed: wrapt 1.14.1)
Handling requests from hook generated metadata: Requires-Dist
Requirement satisfied: requests
(installed: requests 2.28.1)
Handling ratelimiter from hook generated metadata: Requires-Dist
Requirement satisfied: ratelimiter
(installed: ratelimiter 1.2.0.post0)
Handling pyyaml from hook generated metadata: Requires-Dist
Requirement satisfied: pyyaml
(installed: pyyaml 6.0)
Handling configargparse from hook generated metadata: Requires-Dist
Requirement satisfied: configargparse
(installed: configargparse 1.5.3)
Handling appdirs from hook generated metadata: Requires-Dist
Requirement satisfied: appdirs
(installed: appdirs 1.4.4)
Handling datrie from hook generated metadata: Requires-Dist
Requirement satisfied: datrie
(installed: datrie 0.8.2)
Handling jsonschema from hook generated metadata: Requires-Dist
Requirement satisfied: jsonschema
(installed: jsonschema 4.17.0)
Handling docutils from hook generated metadata: Requires-Dist
Requirement satisfied: docutils
(installed: docutils 0.19)
Handling gitpython from hook generated metadata: Requires-Dist
Requirement satisfied: gitpython
(installed: gitpython 3.1.27)
Handling psutil from hook generated metadata: Requires-Dist
Requirement satisfied: psutil
(installed: psutil 5.9.2)
Handling nbformat from hook generated metadata: Requires-Dist
Requirement satisfied: nbformat
(installed: nbformat 5.7.0)
Handling toposort from hook generated metadata: Requires-Dist
Requirement satisfied: toposort
(installed: toposort 1.7)
Handling connection-pool (>=0.0.3) from hook generated metadata: Requires-Dist
Requirement satisfied: connection-pool (>=0.0.3)
(installed: connection-pool 0.0.3)
Handling pulp (>=2.0) from hook generated metadata: Requires-Dist
Requirement satisfied: pulp (>=2.0)
(installed: pulp 2.6.0)
Handling smart-open (>=3.0) from hook generated metadata: Requires-Dist
Requirement satisfied: smart-open (>=3.0)
(installed: smart-open 5.2.1)
Handling stopit from hook generated metadata: Requires-Dist
Requirement satisfied: stopit
(installed: stopit 1.1.2)
Handling tabulate from hook generated metadata: Requires-Dist
Requirement satisfied: tabulate
(installed: tabulate 0.9.0)
Handling yte (<2.0,>=1.0) from hook generated metadata: Requires-Dist
Requirement satisfied: yte (<2.0,>=1.0)
(installed: yte 1.5.1)
Handling jinja2 (<4.0,>=3.0) from hook generated metadata: Requires-Dist
Requirement satisfied: jinja2 (<4.0,>=3.0)
(installed: jinja2 3.0.3)
Handling reretry from hook generated metadata: Requires-Dist
Requirement satisfied: reretry
(installed: reretry 0.11.2)
Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement satisfied: oauth2client ; extra == 'google-cloud'
(installed: oauth2client 4.1.3)
Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement satisfied: google-crc32c ; extra == 'google-cloud'
(installed: google-crc32c 1.1.2)
Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement satisfied: google-api-python-client ; extra == 'google-cloud'
(installed: google-api-python-client 2.68.0)
Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist
Requirement satisfied: google-cloud-storage ; extra == 'google-cloud'
(installed: google-cloud-storage 2.7.0)
Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist
Requirement satisfied: slacker ; extra == 'messaging'
(installed: slacker 0.14.0)
Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist
Ignoring alien requirement: peppy ; extra == 'pep'
Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist
Ignoring alien requirement: eido ; extra == 'pep'
Handling jinja2 ; extra == 'reports' from hook generated metadata: Requires-Dist
Requirement satisfied: jinja2 ; extra == 'reports'
(installed: jinja2 3.0.3)
Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist
Requirement satisfied: pygments ; extra == 'reports'
(installed: pygments 2.13.0)
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.EiSw3a
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd snakemake-7.18.1
+ mkdir -p /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ TMPDIR=/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-7.18.1/pyproject-wheeldir
Processing /builddir/build/BUILD/snakemake-7.18.1
Preparing metadata (pyproject.toml): started
Running command Preparing metadata (pyproject.toml)
running dist_info
creating /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake.egg-info
writing /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake.egg-info/PKG-INFO
writing dependency_links to /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake.egg-info/dependency_links.txt
writing entry points to /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake.egg-info/entry_points.txt
writing requirements to /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake.egg-info/requires.txt
writing top-level names to /builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake.egg-info/top_level.txt
writing manifest file '/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake.egg-info/SOURCES.txt'
reading manifest file '/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
adding license file 'AUTHORS.rst'
writing manifest file '/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake.egg-info/SOURCES.txt'
creating '/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-modern-metadata-20c_hvc7/snakemake-7.18.1.dist-info'
adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*")
adding license file "AUTHORS.rst" (matched pattern "AUTHORS*")
Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: snakemake
Building wheel for snakemake (pyproject.toml): started
Running command Building wheel for snakemake (pyproject.toml)
running bdist_wheel
running build
running build_py
creating build
creating build/lib
creating build/lib/snakemake
copying snakemake/wrapper.py -> build/lib/snakemake
copying snakemake/workflow.py -> build/lib/snakemake
copying snakemake/utils.py -> build/lib/snakemake
copying snakemake/target_jobs.py -> build/lib/snakemake
copying snakemake/stats.py -> build/lib/snakemake
copying snakemake/sourcecache.py -> build/lib/snakemake
copying snakemake/shell.py -> build/lib/snakemake
copying snakemake/script.py -> build/lib/snakemake
copying snakemake/scheduler.py -> build/lib/snakemake
copying snakemake/rules.py -> build/lib/snakemake
copying snakemake/ruleinfo.py -> build/lib/snakemake
copying snakemake/resources.py -> build/lib/snakemake
copying snakemake/persistence.py -> build/lib/snakemake
copying snakemake/path_modifier.py -> build/lib/snakemake
copying snakemake/parser.py -> build/lib/snakemake
copying snakemake/output_index.py -> build/lib/snakemake
copying snakemake/notebook.py -> build/lib/snakemake
copying snakemake/modules.py -> build/lib/snakemake
copying snakemake/logging.py -> build/lib/snakemake
copying snakemake/jobs.py -> build/lib/snakemake
copying snakemake/io.py -> build/lib/snakemake
copying snakemake/gui.py -> build/lib/snakemake
copying snakemake/exceptions.py -> build/lib/snakemake
copying snakemake/decorators.py -> build/lib/snakemake
copying snakemake/dag.py -> build/lib/snakemake
copying snakemake/cwl.py -> build/lib/snakemake
copying snakemake/checkpoints.py -> build/lib/snakemake
copying snakemake/benchmark.py -> build/lib/snakemake
copying snakemake/_version.py -> build/lib/snakemake
copying snakemake/__main__.py -> build/lib/snakemake
copying snakemake/__init__.py -> build/lib/snakemake
creating build/lib/snakemake/remote
copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote
copying snakemake/remote/webdav.py -> build/lib/snakemake/remote
copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote
copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote
copying snakemake/remote/gfal.py -> build/lib/snakemake/remote
copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote
copying snakemake/remote/__init__.py -> build/lib/snakemake/remote
copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote
copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote
copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote
copying snakemake/remote/S3.py -> build/lib/snakemake/remote
copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote
copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote
copying snakemake/remote/GS.py -> build/lib/snakemake/remote
copying snakemake/remote/FTP.py -> build/lib/snakemake/remote
copying snakemake/remote/EGA.py -> build/lib/snakemake/remote
copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote
creating build/lib/snakemake/report
copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report
copying snakemake/report/__init__.py -> build/lib/snakemake/report
creating build/lib/snakemake/report/template
copying snakemake/report/template/__init__.py -> build/lib/snakemake/report/template
creating build/lib/snakemake/report/template/components
copying snakemake/report/template/components/__init__.py -> build/lib/snakemake/report/template/components
creating build/lib/snakemake/report/data
copying snakemake/report/data/timeline.py -> build/lib/snakemake/report/data
copying snakemake/report/data/runtimes.py -> build/lib/snakemake/report/data
copying snakemake/report/data/rules.py -> build/lib/snakemake/report/data
copying snakemake/report/data/rulegraph.py -> build/lib/snakemake/report/data
copying snakemake/report/data/results.py -> build/lib/snakemake/report/data
copying snakemake/report/data/packages.py -> build/lib/snakemake/report/data
copying snakemake/report/data/common.py -> build/lib/snakemake/report/data
copying snakemake/report/data/categories.py -> build/lib/snakemake/report/data
copying snakemake/report/data/__init__.py -> build/lib/snakemake/report/data
creating build/lib/snakemake/common
copying snakemake/common/tbdstring.py -> build/lib/snakemake/common
copying snakemake/common/__init__.py -> build/lib/snakemake/common
creating build/lib/snakemake/caching
copying snakemake/caching/remote.py -> build/lib/snakemake/caching
copying snakemake/caching/local.py -> build/lib/snakemake/caching
copying snakemake/caching/hash.py -> build/lib/snakemake/caching
copying snakemake/caching/__init__.py -> build/lib/snakemake/caching
creating build/lib/snakemake/deployment
copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment
copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment
copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment
copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment
copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment
creating build/lib/snakemake/linting
copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting
copying snakemake/linting/rules.py -> build/lib/snakemake/linting
copying snakemake/linting/links.py -> build/lib/snakemake/linting
copying snakemake/linting/__init__.py -> build/lib/snakemake/linting
creating build/lib/snakemake/executors
copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors
copying snakemake/executors/google_lifesciences.py -> build/lib/snakemake/executors
copying snakemake/executors/ga4gh_tes.py -> build/lib/snakemake/executors
copying snakemake/executors/flux.py -> build/lib/snakemake/executors
copying snakemake/executors/common.py -> build/lib/snakemake/executors
copying snakemake/executors/__init__.py -> build/lib/snakemake/executors
creating build/lib/snakemake/unit_tests
copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests
creating build/lib/snakemake/unit_tests/templates
copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates
creating build/lib/snakemake/template_rendering
copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering
copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering
copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering
copying snakemake/report.css -> build/lib/snakemake
copying snakemake/gui.html -> build/lib/snakemake
copying snakemake/report/template/style.css -> build/lib/snakemake/report/template
copying snakemake/report/template/index.html.jinja2 -> build/lib/snakemake/report/template
copying snakemake/report/template/logo.svg -> build/lib/snakemake/report/template
copying snakemake/report/template/components/subcategory.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/stats.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/search_results.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/rule_info.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/rule_graph.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/result_view_button.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/result_info.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/report_info.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/navbar.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/menu.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/list_item.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/list_heading.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/icon.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/content.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/common.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/category.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/button.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/breadcrumbs.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/app.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/abstract_results.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/abstract_menu.js -> build/lib/snakemake/report/template/components
copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors
copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates
copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates
UPDATING build/lib/snakemake/_version.py
set build/lib/snakemake/_version.py to '7.18.1'
installing to build/bdist.linux-x86_64/wheel
running install
running install_lib
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/wheel
creating build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/_version.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/gui.html -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/report.css -> build/bdist.linux-x86_64/wheel/snakemake
creating build/bdist.linux-x86_64/wheel/snakemake/template_rendering
copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering
copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering
copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-x86_64/wheel/snakemake/template_rendering
creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests
creating build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates
copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates
copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates
copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests/templates
copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/unit_tests
creating build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/common.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/flux.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/ga4gh_tes.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/google_lifesciences.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-x86_64/wheel/snakemake/executors
creating build/bdist.linux-x86_64/wheel/snakemake/linting
copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/linting
copying build/lib/snakemake/linting/links.py -> build/bdist.linux-x86_64/wheel/snakemake/linting
copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/linting
copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-x86_64/wheel/snakemake/linting
creating build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-x86_64/wheel/snakemake/deployment
creating build/bdist.linux-x86_64/wheel/snakemake/caching
copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/caching
copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-x86_64/wheel/snakemake/caching
copying build/lib/snakemake/caching/local.py -> build/bdist.linux-x86_64/wheel/snakemake/caching
copying build/lib/snakemake/caching/remote.py -> build/bdist.linux-x86_64/wheel/snakemake/caching
creating build/bdist.linux-x86_64/wheel/snakemake/common
copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/common
copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-x86_64/wheel/snakemake/common
creating build/bdist.linux-x86_64/wheel/snakemake/report
creating build/bdist.linux-x86_64/wheel/snakemake/report/data
copying build/lib/snakemake/report/data/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data
copying build/lib/snakemake/report/data/categories.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data
copying build/lib/snakemake/report/data/common.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data
copying build/lib/snakemake/report/data/packages.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data
copying build/lib/snakemake/report/data/results.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data
copying build/lib/snakemake/report/data/rulegraph.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data
copying build/lib/snakemake/report/data/rules.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data
copying build/lib/snakemake/report/data/runtimes.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data
copying build/lib/snakemake/report/data/timeline.py -> build/bdist.linux-x86_64/wheel/snakemake/report/data
creating build/bdist.linux-x86_64/wheel/snakemake/report/template
copying build/lib/snakemake/report/template/logo.svg -> build/bdist.linux-x86_64/wheel/snakemake/report/template
copying build/lib/snakemake/report/template/index.html.jinja2 -> build/bdist.linux-x86_64/wheel/snakemake/report/template
copying build/lib/snakemake/report/template/style.css -> build/bdist.linux-x86_64/wheel/snakemake/report/template
creating build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/abstract_menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/abstract_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/app.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/breadcrumbs.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/category.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/common.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/content.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/icon.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/list_heading.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/list_item.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/menu.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/navbar.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/report_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/result_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/result_view_button.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/rule_graph.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/rule_info.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/search_results.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/stats.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/subcategory.js -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/components/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/template/components
copying build/lib/snakemake/report/template/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report/template
copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/report
copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-x86_64/wheel/snakemake/report
creating build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-x86_64/wheel/snakemake/remote
copying build/lib/snakemake/__init__.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/__main__.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/benchmark.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/cwl.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/dag.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/decorators.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/exceptions.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/gui.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/io.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/jobs.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/logging.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/modules.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/notebook.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/output_index.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/parser.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/persistence.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/resources.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/rules.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/scheduler.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/script.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/shell.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/stats.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/utils.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/workflow.py -> build/bdist.linux-x86_64/wheel/snakemake
copying build/lib/snakemake/wrapper.py -> build/bdist.linux-x86_64/wheel/snakemake
running install_egg_info
running egg_info
writing snakemake.egg-info/PKG-INFO
writing dependency_links to snakemake.egg-info/dependency_links.txt
writing entry points to snakemake.egg-info/entry_points.txt
writing requirements to snakemake.egg-info/requires.txt
writing top-level names to snakemake.egg-info/top_level.txt
reading manifest file 'snakemake.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
adding license file 'AUTHORS.rst'
writing manifest file 'snakemake.egg-info/SOURCES.txt'
Copying snakemake.egg-info to build/bdist.linux-x86_64/wheel/snakemake-7.18.1-py3.11.egg-info
running install_scripts
adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*")
adding license file "AUTHORS.rst" (matched pattern "AUTHORS*")
creating build/bdist.linux-x86_64/wheel/snakemake-7.18.1.dist-info/WHEEL
creating '/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir/pip-wheel-sz6n4a9_/tmpga9w27ul/snakemake-7.18.1-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
adding 'snakemake/__init__.py'
adding 'snakemake/__main__.py'
adding 'snakemake/_version.py'
adding 'snakemake/benchmark.py'
adding 'snakemake/checkpoints.py'
adding 'snakemake/cwl.py'
adding 'snakemake/dag.py'
adding 'snakemake/decorators.py'
adding 'snakemake/exceptions.py'
adding 'snakemake/gui.html'
adding 'snakemake/gui.py'
adding 'snakemake/io.py'
adding 'snakemake/jobs.py'
adding 'snakemake/logging.py'
adding 'snakemake/modules.py'
adding 'snakemake/notebook.py'
adding 'snakemake/output_index.py'
adding 'snakemake/parser.py'
adding 'snakemake/path_modifier.py'
adding 'snakemake/persistence.py'
adding 'snakemake/report.css'
adding 'snakemake/resources.py'
adding 'snakemake/ruleinfo.py'
adding 'snakemake/rules.py'
adding 'snakemake/scheduler.py'
adding 'snakemake/script.py'
adding 'snakemake/shell.py'
adding 'snakemake/sourcecache.py'
adding 'snakemake/stats.py'
adding 'snakemake/target_jobs.py'
adding 'snakemake/utils.py'
adding 'snakemake/workflow.py'
adding 'snakemake/wrapper.py'
adding 'snakemake/caching/__init__.py'
adding 'snakemake/caching/hash.py'
adding 'snakemake/caching/local.py'
adding 'snakemake/caching/remote.py'
adding 'snakemake/common/__init__.py'
adding 'snakemake/common/tbdstring.py'
adding 'snakemake/deployment/__init__.py'
adding 'snakemake/deployment/conda.py'
adding 'snakemake/deployment/containerize.py'
adding 'snakemake/deployment/env_modules.py'
adding 'snakemake/deployment/singularity.py'
adding 'snakemake/executors/__init__.py'
adding 'snakemake/executors/common.py'
adding 'snakemake/executors/flux.py'
adding 'snakemake/executors/ga4gh_tes.py'
adding 'snakemake/executors/google_lifesciences.py'
adding 'snakemake/executors/google_lifesciences_helper.py'
adding 'snakemake/executors/jobscript.sh'
adding 'snakemake/linting/__init__.py'
adding 'snakemake/linting/links.py'
adding 'snakemake/linting/rules.py'
adding 'snakemake/linting/snakefiles.py'
adding 'snakemake/remote/AzBlob.py'
adding 'snakemake/remote/EGA.py'
adding 'snakemake/remote/FTP.py'
adding 'snakemake/remote/GS.py'
adding 'snakemake/remote/HTTP.py'
adding 'snakemake/remote/NCBI.py'
adding 'snakemake/remote/S3.py'
adding 'snakemake/remote/S3Mocked.py'
adding 'snakemake/remote/SFTP.py'
adding 'snakemake/remote/XRootD.py'
adding 'snakemake/remote/__init__.py'
adding 'snakemake/remote/dropbox.py'
adding 'snakemake/remote/gfal.py'
adding 'snakemake/remote/gridftp.py'
adding 'snakemake/remote/iRODS.py'
adding 'snakemake/remote/webdav.py'
adding 'snakemake/remote/zenodo.py'
adding 'snakemake/report/__init__.py'
adding 'snakemake/report/rulegraph_spec.py'
adding 'snakemake/report/data/__init__.py'
adding 'snakemake/report/data/categories.py'
adding 'snakemake/report/data/common.py'
adding 'snakemake/report/data/packages.py'
adding 'snakemake/report/data/results.py'
adding 'snakemake/report/data/rulegraph.py'
adding 'snakemake/report/data/rules.py'
adding 'snakemake/report/data/runtimes.py'
adding 'snakemake/report/data/timeline.py'
adding 'snakemake/report/template/__init__.py'
adding 'snakemake/report/template/index.html.jinja2'
adding 'snakemake/report/template/logo.svg'
adding 'snakemake/report/template/style.css'
adding 'snakemake/report/template/components/__init__.py'
adding 'snakemake/report/template/components/abstract_menu.js'
adding 'snakemake/report/template/components/abstract_results.js'
adding 'snakemake/report/template/components/app.js'
adding 'snakemake/report/template/components/breadcrumbs.js'
adding 'snakemake/report/template/components/button.js'
adding 'snakemake/report/template/components/category.js'
adding 'snakemake/report/template/components/common.js'
adding 'snakemake/report/template/components/content.js'
adding 'snakemake/report/template/components/icon.js'
adding 'snakemake/report/template/components/list_heading.js'
adding 'snakemake/report/template/components/list_item.js'
adding 'snakemake/report/template/components/menu.js'
adding 'snakemake/report/template/components/navbar.js'
adding 'snakemake/report/template/components/report_info.js'
adding 'snakemake/report/template/components/result_info.js'
adding 'snakemake/report/template/components/result_view_button.js'
adding 'snakemake/report/template/components/rule_graph.js'
adding 'snakemake/report/template/components/rule_info.js'
adding 'snakemake/report/template/components/search_results.js'
adding 'snakemake/report/template/components/stats.js'
adding 'snakemake/report/template/components/subcategory.js'
adding 'snakemake/template_rendering/__init__.py'
adding 'snakemake/template_rendering/jinja2.py'
adding 'snakemake/template_rendering/yte.py'
adding 'snakemake/unit_tests/__init__.py'
adding 'snakemake/unit_tests/templates/__init__.py'
adding 'snakemake/unit_tests/templates/common.py.jinja2'
adding 'snakemake/unit_tests/templates/ruletest.py.jinja2'
adding 'snakemake-7.18.1.dist-info/AUTHORS.rst'
adding 'snakemake-7.18.1.dist-info/LICENSE.md'
adding 'snakemake-7.18.1.dist-info/METADATA'
adding 'snakemake-7.18.1.dist-info/WHEEL'
adding 'snakemake-7.18.1.dist-info/entry_points.txt'
adding 'snakemake-7.18.1.dist-info/top_level.txt'
adding 'snakemake-7.18.1.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Building wheel for snakemake (pyproject.toml): finished with status 'done'
Created wheel for snakemake: filename=snakemake-7.18.1-py3-none-any.whl size=350662 sha256=3287873b07e2a9b6977766eaab643738fa18983ce77c28938673194346ff71d0
Stored in directory: /builddir/.cache/pip/wheels/16/0f/ee/b8b4cbf58676596565ef290a3f7ff8307dddeead5a91a198a3
Successfully built snakemake
+ find docs -type f -name '*.svg'
+ read -r fn
++ dirname docs/executor_tutorial/workflow/quals.svg
++ basename docs/executor_tutorial/workflow/quals.svg .svg
+ rsvg-convert --format=pdf --output=docs/executor_tutorial/workflow/quals.pdf docs/executor_tutorial/workflow/quals.svg
+ read -r fn
+ xargs -r -t sed -r -i 's/(image::.*)\.svg/\1\.pdf/'
+ find docs/executor_tutorial -type f -exec gawk '/\.svg/ { print FILENAME; nextfile }' '{}' +
sed -r -i 's/(image::.*)\.svg/\1\.pdf/' docs/executor_tutorial/google_lifesciences.rst
+ PYTHONPATH=/builddir/build/BUILD/snakemake-7.18.1
+ /usr/bin/make -O -j2 V=1 VERBOSE=1 -C docs latexpdf SPHINXOPTS=-j2
make: Entering directory '/builddir/build/BUILD/snakemake-7.18.1/docs'
sphinx-build -b latex -d _build/doctrees -j2 . _build/latex
Running Sphinx v5.3.0
making output directory... done
myst v0.18.1: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=[], disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, highlight_code_blocks=True, number_code_blocks=[], title_to_header=False, heading_anchors=None, heading_slug_func=None, footnote_transition=True, words_per_minute=200, sub_delimiters=('{', '}'), linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area')
building [mo]: targets for 0 po files that are out of date
building [latex]: all documents
updating environment: [new config] 37 added, 0 changed, 0 removed
reading sources... [ 33%] executing/caching .. index
reading sources... [ 66%] project_info/authors .. snakefiles/remote_files
reading sources... [100%] snakefiles/reporting .. tutorial/tutorial
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
processing Snakemake.tex... index getting_started/installation tutorial/tutorial tutorial/setup tutorial/basics tutorial/advanced tutorial/additional_features tutorial/short executor_tutorial/tutorial executor_tutorial/google_lifesciences executor_tutorial/azure_aks executor_tutorial/flux snakefiles/best_practices executing/cli executing/cluster executing/cloud executing/grouping executing/caching executing/interoperability executing/monitoring snakefiles/writing_snakefiles snakefiles/rules snakefiles/configuration snakefiles/modularization snakefiles/remote_files snakefiles/utils snakefiles/deployment snakefiles/reporting snakefiles/testing snakefiles/foreign_wms project_info/citations project_info/more_resources project_info/faq project_info/contributing project_info/authors project_info/history project_info/license
resolving references...
done
writing... done
copying images... [ 16%] tutorial/workflow/dag_index.png
copying images... [ 33%] tutorial/workflow/dag_call.png
copying images... [ 50%] executor_tutorial/workflow/upload-google-storage.png
copying images... [ 66%] executor_tutorial/workflow/quals.pdf
copying images... [ 83%] executor_tutorial/workflow/results-google-storage.png
copying images... [100%] project_info/img/idea.png
copying TeX support files... copying TeX support files...
done
build succeeded, 423 warnings.
The LaTeX files are in _build/latex.
Run 'make' in that directory to run these through (pdf)latex
(use `make latexpdf' here to do that automatically).
Running LaTeX files through pdflatex...
/builddir/build/BUILD/snakemake-7.18.1/docs/executing/cli.rst:101: WARNING: duplicate label profiles, other instance in /builddir/build/BUILD/snakemake-7.18.1/docs/executing/cli.rst
/builddir/build/BUILD/snakemake-7.18.1/docs/executing/cloud.rst:72: WARNING: duplicate label kubernetes, other instance in /builddir/build/BUILD/snakemake-7.18.1/docs/executing/cli.rst
/builddir/build/BUILD/snakemake-7.18.1/docs/executing/cloud.rst:233: WARNING: duplicate label machine types, other instance in /builddir/build/BUILD/snakemake-7.18.1/docs/executing/cloud.rst
/builddir/build/BUILD/snakemake-7.18.1/docs/executing/cloud.rst:405: WARNING: duplicate label execution, other instance in /builddir/build/BUILD/snakemake-7.18.1/docs/executing/cli.rst
/builddir/build/BUILD/snakemake-7.18.1/docs/executing/cluster.rst:5: WARNING: duplicate label cluster, other instance in /builddir/build/BUILD/snakemake-7.18.1/docs/executing/cli.rst
/builddir/build/BUILD/snakemake-7.18.1/docs/executing/monitoring.rst:5: WARNING: duplicate label monitoring, other instance in /builddir/build/BUILD/snakemake-7.18.1/docs/executing/monitoring.rst
/builddir/build/BUILD/snakemake-7.18.1/docs/executor_tutorial/azure_aks.rst:184: ERROR: Unexpected indentation.
/builddir/build/BUILD/snakemake-7.18.1/docs/executor_tutorial/flux.rst:13: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.18.1/docs/executor_tutorial/azure_aks.rst
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How can I avoid system /tmp to be used when combining singularity and conda?
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How can I avoid system /tmp to be used when combining singularity and conda?
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Chapter 1.
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Chapter 2.
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Chapter 3.
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Chapter 4.
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\TU/FreeSerif(0)/m/n/10 Using the Google Life Sciences executor with Snakemake
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[]\TU/FreeSerif(0)/m/n/10 There is a lot going on here, so let’s unpack it: thi
s creates an [][]auto-scaling Kubernetes cluster[][]
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[]\TU/FreeSerif(0)/m/n/10 Target particular jobs by RULE:WILDCARD1=VALUE,WILDCA
RD2=VALUE,…
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[]\TU/FreeSerif(0)/m/n/10 Additional tibanna config e.g. –tibanna-config spot_i
nstance=true sub-
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\TU/FreeSerif(0)/m/n/10 Snakemake tracks the code that was used to create your
files. In combination with [][]\TU/FreeMono(0)/m/n/10 summary \TU/FreeSerif(0)/
m/n/10 or
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[]\TU/FreeSerif(0)/m/n/10 When used in conjunction with \TU/FreeMono(0)/m/n/10
NCBI.RemoteProvider().search()\TU/FreeSerif(0)/m/n/10 , Snakemake and \TU/FreeM
ono(0)/m/n/10 NCBI.
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[]\TU/FreeSerif(0)/m/n/10 The default location for the configuration file is \T
U/FreeMono(0)/m/n/10 ~/.irods/irods_environment.json\TU/FreeSerif(0)/m/n/10 . T
he \TU/FreeMono(0)/m/n/10 Re-
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an alternative path to the
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[]\TU/FreeSerif(0)/m/n/10 First, we load a local configuration file. Next, we d
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oaded from
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11560.
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ry-wildcard-what-can-i-do' on page 179 undefined on input line 11576.
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clic-dependency-or-a-periodicwildcarderror-what-can-i-do' on page 179 undefined
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e-values-to-the-workflow-via-the-command-line' on page 179 undefined on input l
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l-command-are-braces-unsupported' on page 179 undefined on input line 11588.
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t-do-not-follow-a-consistent-naming-scheme' on page 179 undefined on input line
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tted' on page 179 undefined on input line 11600.
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hting-in-vim-for-snakefiles' on page 179 undefined on input line 11604.
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unctions-from-another-python-file-is-that-possible' on page 179 undefined on in
put line 11608.
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luster-where-its-main-process-is-not-allowed-to-run-on-the-head-node' on page 1
79 undefined on input line 11612.
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ymlink' on page 179 undefined on input line 11620.
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an-output-file-is-empty' on page 179 undefined on input line 11648.
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rking-directory' on page 179 undefined on input line 11652.
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ules-with-updated-code-or-parameters' on page 179 undefined on input line 11656
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put-or-output-by-a-variable-index' on page 179 undefined on input line 11684.
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-installing-snakemake-with-pip-or-easy-install-what-shall-i-do' on page 179 und
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or-the-zsh-shell' on page 179 undefined on input line 11692.
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iles' on page 186 undefined on input line 12079.
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[]\TU/FreeSerif(0)/m/n/10 Provide hyperlink targets, at least for the first two
section levels. For this, use the format
[197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208]
[209] [210] [211] [212] [213] [214] [215] [216] [217]
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[]\TU/FreeSerif(0)/m/n/10 provide temporary IPYTHONDIR for notebook execution i
n order to avoid race conditions in
[218] [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229]
[230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241]
[242]
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[]\TU/FreeSerif(0)/m/n/10 Allow URL to local git repo with wrapper directive (\
TU/FreeMono(0)/m/n/10 git+file:///path/to/your/repo/
[243] [244] [245] [246] [247] [248] [249] [250] [251] [252]
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[]\TU/FreeSerif(0)/m/n/10 When submitting cluster jobs (either through [][]\TU/
FreeMono(0)/m/n/10 cluster \TU/FreeSerif(0)/m/n/10 or [][]\TU/FreeMono(0)/m/n/1
0 drmaa\TU/FreeSerif(0)/m/n/10 ), you can now use
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No file Snakemake.ind.
[256] (./Snakemake.aux)
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(rerunfilecheck) or use package `bookmark'.
)
(see the transcript file for additional information)
Output written on Snakemake.pdf (260 pages).
Transcript written on Snakemake.log.
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(./Snakemake.toc) [1] [2] [1] [2]
Chapter 1.
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Chapter 2.
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Chapter 3.
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Chapter 4.
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\TU/FreeSerif(0)/m/n/10 Using the Google Life Sciences executor with Snakemake
requires the environment variable
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[]\TU/FreeSerif(0)/m/n/10 There is a lot going on here, so let’s unpack it: thi
s creates an [][]auto-scaling Kubernetes cluster[][]
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[]\TU/FreeSerif(0)/m/n/10 Target particular jobs by RULE:WILDCARD1=VALUE,WILDCA
RD2=VALUE,…
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[]\TU/FreeSerif(0)/m/n/10 Additional tibanna config e.g. –tibanna-config spot_i
nstance=true sub-
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[]|\TU/FreeSerif(0)/m/n/10 Snakemake gets the status of panoptes.
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\TU/FreeSerif(0)/m/n/10 Snakemake continues to run if the status
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[]|\TU/FreeMono(0)/m/n/10 /
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\TU/FreeMono(0)/m/n/10 update_workflow_status|
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\TU/FreeSerif(0)/m/n/10 Snakemake tracks the code that was used to create your
files. In combination with [][]\TU/FreeMono(0)/m/n/10 summary \TU/FreeSerif(0)/
m/n/10 or
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[]\TU/FreeSerif(0)/m/n/10 When used in conjunction with \TU/FreeMono(0)/m/n/10
NCBI.RemoteProvider().search()\TU/FreeSerif(0)/m/n/10 , Snakemake and \TU/FreeM
ono(0)/m/n/10 NCBI.
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[]\TU/FreeSerif(0)/m/n/10 The default location for the configuration file is \T
U/FreeMono(0)/m/n/10 ~/.irods/irods_environment.json\TU/FreeSerif(0)/m/n/10 . T
he \TU/FreeMono(0)/m/n/10 Re-
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\TU/FreeMono(0)/m/n/10 moteProvider() \TU/FreeSerif(0)/m/n/10 class accepts the
parameter \TU/FreeMono(0)/m/n/10 irods_env_file \TU/FreeSerif(0)/m/n/10 where
an alternative path to the
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\TU/FreeSerif(0)/m/n/10 If you need to access a deposition with restricted acce
ss, you have to additionally provide a \TU/FreeMono(0)/m/n/10 re-
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[]\TU/FreeSerif(0)/m/n/10 First, we load a local configuration file. Next, we d
efine the module \TU/FreeMono(0)/m/n/10 dna_seq \TU/FreeSerif(0)/m/n/10 to be l
oaded from
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[]\TU/FreeSerif(0)/m/n/10 Provide hyperlink targets, at least for the first two
section levels. For this, use the format
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[]\TU/FreeSerif(0)/m/n/10 provide temporary IPYTHONDIR for notebook execution i
n order to avoid race conditions in
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[]\TU/FreeSerif(0)/m/n/10 Allow URL to local git repo with wrapper directive (\
TU/FreeMono(0)/m/n/10 git+file:///path/to/your/repo/
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[]\TU/FreeSerif(0)/m/n/10 When submitting cluster jobs (either through [][]\TU/
FreeMono(0)/m/n/10 cluster \TU/FreeSerif(0)/m/n/10 or [][]\TU/FreeMono(0)/m/n/1
0 drmaa\TU/FreeSerif(0)/m/n/10 ), you can now use
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(see the transcript file for additional information)
Output written on Snakemake.pdf (260 pages).
Transcript written on Snakemake.log.
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(./sphinxmessages.sty)
Writing index file Snakemake.idx
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(./Snakemake.out) (./Snakemake.out)
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(./Snakemake.toc) [1] [2] [1] [2]
Chapter 1.
[3] [4]
Chapter 2.
[5] [6]
Chapter 3.
[7] [8]
Chapter 4.
[9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23]
[24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38]
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\TU/FreeSerif(0)/m/n/10 Using the Google Life Sciences executor with Snakemake
requires the environment variable
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[]\TU/FreeSerif(0)/m/n/10 There is a lot going on here, so let’s unpack it: thi
s creates an [][]auto-scaling Kubernetes cluster[][]
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[]\TU/FreeSerif(0)/m/n/10 Target particular jobs by RULE:WILDCARD1=VALUE,WILDCA
RD2=VALUE,…
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[]\TU/FreeSerif(0)/m/n/10 Additional tibanna config e.g. –tibanna-config spot_i
nstance=true sub-
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[]|\TU/FreeSerif(0)/m/n/10 Snakemake gets the status of panoptes.
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\TU/FreeSerif(0)/m/n/10 Snakemake continues to run if the status
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[]|\TU/FreeMono(0)/m/n/10 /
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\TU/FreeMono(0)/m/n/10 update_workflow_status|
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[121]
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\TU/FreeSerif(0)/m/n/10 Snakemake tracks the code that was used to create your
files. In combination with [][]\TU/FreeMono(0)/m/n/10 summary \TU/FreeSerif(0)/
m/n/10 or
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[]\TU/FreeSerif(0)/m/n/10 When used in conjunction with \TU/FreeMono(0)/m/n/10
NCBI.RemoteProvider().search()\TU/FreeSerif(0)/m/n/10 , Snakemake and \TU/FreeM
ono(0)/m/n/10 NCBI.
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[]\TU/FreeSerif(0)/m/n/10 The default location for the configuration file is \T
U/FreeMono(0)/m/n/10 ~/.irods/irods_environment.json\TU/FreeSerif(0)/m/n/10 . T
he \TU/FreeMono(0)/m/n/10 Re-
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\TU/FreeMono(0)/m/n/10 moteProvider() \TU/FreeSerif(0)/m/n/10 class accepts the
parameter \TU/FreeMono(0)/m/n/10 irods_env_file \TU/FreeSerif(0)/m/n/10 where
an alternative path to the
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\TU/FreeSerif(0)/m/n/10 If you need to access a deposition with restricted acce
ss, you have to additionally provide a \TU/FreeMono(0)/m/n/10 re-
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[]\TU/FreeSerif(0)/m/n/10 First, we load a local configuration file. Next, we d
efine the module \TU/FreeMono(0)/m/n/10 dna_seq \TU/FreeSerif(0)/m/n/10 to be l
oaded from
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[]\TU/FreeSerif(0)/m/n/10 Provide hyperlink targets, at least for the first two
section levels. For this, use the format
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[209] [210] [211] [212] [213] [214] [215] [216] [217]
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[]\TU/FreeSerif(0)/m/n/10 provide temporary IPYTHONDIR for notebook execution i
n order to avoid race conditions in
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[242]
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[]\TU/FreeSerif(0)/m/n/10 Allow URL to local git repo with wrapper directive (\
TU/FreeMono(0)/m/n/10 git+file:///path/to/your/repo/
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[]\TU/FreeSerif(0)/m/n/10 When submitting cluster jobs (either through [][]\TU/
FreeMono(0)/m/n/10 cluster \TU/FreeSerif(0)/m/n/10 or [][]\TU/FreeMono(0)/m/n/1
0 drmaa\TU/FreeSerif(0)/m/n/10 ), you can now use
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(see the transcript file for additional information)
Output written on Snakemake.pdf (260 pages).
Transcript written on Snakemake.log.
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make[1]: Leaving directory '/builddir/build/BUILD/snakemake-7.18.1/docs/_build/latex'
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make: Leaving directory '/builddir/build/BUILD/snakemake-7.18.1/docs'
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====================================
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contents, floats, footnotes, index, bibliography, output,
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load-unicode-data.tex v1.14 (2020-10-24)
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# UnicodeData-13.0.0.txt
# Modified 2020-03-12 11:00:00 GMT [JAW]
)
===========================================
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+ RPM_EC=0
++ jobs -p
+ exit 0
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64
++ dirname /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd snakemake-7.18.1
++ xargs basename --multiple
++ ls /builddir/build/BUILD/snakemake-7.18.1/pyproject-wheeldir/snakemake-7.18.1-py3-none-any.whl
++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/'
+ specifier=snakemake==7.18.1
+ TMPDIR=/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir
+ /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64 --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-7.18.1/pyproject-wheeldir snakemake==7.18.1
Using pip 22.3.1 from /usr/lib/python3.11/site-packages/pip (python 3.11)
Looking in links: /builddir/build/BUILD/snakemake-7.18.1/pyproject-wheeldir
Processing ./pyproject-wheeldir/snakemake-7.18.1-py3-none-any.whl
Installing collected packages: snakemake
Creating /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin
changing mode of /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin/snakemake to 755
changing mode of /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin/snakemake-bash-completion to 755
Successfully installed snakemake-7.18.1
+ '[' -d /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin ']'
+ '[' -z sP ']'
+ shebang_flags=-kasP
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin/snakemake /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin/snakemake-bash-completion
/builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin/snakemake: updating
/builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin/snakemake-bash-completion: updating
+ rm -rfv /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin/__pycache__
+ rm -f /builddir/build/BUILD/snakemake-7.18.1-1.fc38.x86_64-pyproject-ghost-distinfo
+ site_dirs=()
+ '[' -d /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11/site-packages ']'
+ site_dirs+=("/usr/lib/python3.11/site-packages")
+ '[' /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages '!=' /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11/site-packages ']'
+ '[' -d /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages ']'
+ for site_dir in ${site_dirs[@]}
+ for distinfo in /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64$site_dir/*.dist-info
+ echo '%ghost /usr/lib/python3.11/site-packages/snakemake-7.18.1.dist-info'
+ sed -i s/pip/rpm/ /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11/site-packages/snakemake-7.18.1.dist-info/INSTALLER
+ PYTHONPATH=/usr/lib/rpm/redhat
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64 --record /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11/site-packages/snakemake-7.18.1.dist-info/RECORD --output /builddir/build/BUILD/snakemake-7.18.1-1.fc38.x86_64-pyproject-record
+ rm -fv /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11/site-packages/snakemake-7.18.1.dist-info/RECORD
removed '/builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11/site-packages/snakemake-7.18.1.dist-info/RECORD'
+ rm -fv /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11/site-packages/snakemake-7.18.1.dist-info/REQUESTED
removed '/builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11/site-packages/snakemake-7.18.1.dist-info/REQUESTED'
++ wc -l /builddir/build/BUILD/snakemake-7.18.1-1.fc38.x86_64-pyproject-ghost-distinfo
++ cut -f1 '-d '
+ lines=1
+ '[' 1 -ne 1 ']'
+ /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-7.18.1-1.fc38.x86_64-pyproject-files --output-modules /builddir/build/BUILD/snakemake-7.18.1-1.fc38.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64 --sitelib /usr/lib/python3.11/site-packages --sitearch /usr/lib64/python3.11/site-packages --python-version 3.11 --pyproject-record /builddir/build/BUILD/snakemake-7.18.1-1.fc38.x86_64-pyproject-record --prefix /usr snakemake
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 7.18.1-1.fc38 --unique-debug-suffix -7.18.1-1.fc38.x86_64 --unique-debug-src-base snakemake-7.18.1-1.fc38.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/snakemake-7.18.1
find: 'debug': No such file or directory
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0
Bytecompiling .py files below /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11 using python3.11
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.orxg4m
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd snakemake-7.18.1
+ k='not test_lint[long_run-positive]'
+ k='not test_lint[long_run-positive] and not test_tibanna'
+ k='not test_lint[long_run-positive] and not test_tibanna and not test_tes'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes'
+ PATH=/builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
+ PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/lib/python3.11/site-packages
+ PYTHONDONTWRITEBYTECODE=1
+ PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-7.18.1/.pyproject-builddir'
+ /usr/bin/pytest -v -k 'not test_lint[long_run-positive] and not test_tibanna and not test_tes' --ignore tests/test_google_lifesciences.py
============================= test session starts ==============================
platform linux -- Python 3.11.0, pytest-7.2.0, pluggy-1.0.0 -- /usr/bin/python3
cachedir: .pytest_cache
rootdir: /builddir/build/BUILD/snakemake-7.18.1
plugins: requests-mock-1.9.3
collecting ... collected 59 items / 3 deselected / 56 selected
tests/test_expand.py::test_simple_expand PASSED [ 1%]
tests/test_expand.py::test_allow_missing PASSED [ 3%]
tests/test_io.py::test_wildcard_regex PASSED [ 5%]
tests/test_io.py::test_expand PASSED [ 7%]
tests/test_kubernetes.py::test_kubernetes_plain SKIPPED (Skipping GC...) [ 8%]
tests/test_kubernetes.py::test_kubernetes_conda SKIPPED (Skipping GC...) [ 10%]
tests/test_kubernetes.py::test_kubernetes_singularity SKIPPED (Skipp...) [ 12%]
tests/test_kubernetes.py::test_kubernetes_conda_singularity SKIPPED [ 14%]
tests/test_kubernetes.py::test_issue1041 SKIPPED (Skipping GCLOUD te...) [ 16%]
tests/test_linting.py::test_lint[version-positive] PASSED [ 17%]
tests/test_linting.py::test_lint[version-negative] PASSED [ 19%]
tests/test_linting.py::test_lint[tab_usage-positive] PASSED [ 21%]
tests/test_linting.py::test_lint[tab_usage-negative] PASSED [ 23%]
tests/test_linting.py::test_lint[singularity-positive] PASSED [ 25%]
tests/test_linting.py::test_lint[singularity-negative] PASSED [ 26%]
tests/test_linting.py::test_lint[path_add-positive] PASSED [ 28%]
tests/test_linting.py::test_lint[path_add-negative] PASSED [ 30%]
tests/test_linting.py::test_lint[params_prefix-positive] PASSED [ 32%]
tests/test_linting.py::test_lint[params_prefix-negative] PASSED [ 33%]
tests/test_linting.py::test_lint[not_used_params-positive] PASSED [ 35%]
tests/test_linting.py::test_lint[not_used_params-negative] PASSED [ 37%]
tests/test_linting.py::test_lint[mixed_func_and_rules-positive] PASSED [ 39%]
tests/test_linting.py::test_lint[mixed_func_and_rules-negative] PASSED [ 41%]
tests/test_linting.py::test_lint[missing_software_definition-positive] PASSED [ 42%]
tests/test_linting.py::test_lint[missing_software_definition-negative] PASSED [ 44%]
tests/test_linting.py::test_lint[long_run-negative] PASSED [ 46%]
tests/test_linting.py::test_lint[log_directive-positive] PASSED [ 48%]
tests/test_linting.py::test_lint[log_directive-negative] PASSED [ 50%]
tests/test_linting.py::test_lint[iofile_by_index-positive] PASSED [ 51%]
tests/test_linting.py::test_lint[iofile_by_index-negative] PASSED [ 53%]
tests/test_linting.py::test_lint[envvars-positive] PASSED [ 55%]
tests/test_linting.py::test_lint[envvars-negative] PASSED [ 57%]
tests/test_linting.py::test_lint[dynamic-positive] PASSED [ 58%]
tests/test_linting.py::test_lint[dynamic-negative] PASSED [ 60%]
tests/test_linting.py::test_lint[absolute_paths-positive] PASSED [ 62%]
tests/test_linting.py::test_lint[absolute_paths-negative] PASSED [ 64%]
tests/test_schema.py::test_config PASSED [ 66%]
tests/test_schema.py::test_config_ref PASSED [ 67%]
tests/test_schema.py::test_dataframe PASSED [ 69%]
tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_shebang_and_second_manifest PASSED [ 71%]
tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_with_shebang PASSED [ 73%]
tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_without_shebang PASSED [ 75%]
tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_empty_line_without_shebang PASSED [ 76%]
tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_is_case_insensitive PASSED [ 78%]
tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spacing_has_no_impact PASSED [ 80%]
tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_formatting_not_touched_even_if_wrong PASSED [ 82%]
tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spelt_wrong PASSED [ 83%]
tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_shebang PASSED [ 85%]
tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_without_shebang PASSED [ 87%]
tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_spacing_around_language PASSED [ 89%]
tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_has_non_cargo_block PASSED [ 91%]
tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_missing_closing_fence PASSED [ 92%]
tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_not_in_first_comment_block PASSED [ 94%]
tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_outer_line_doc_comment PASSED [ 96%]
tests/test_script.py::TestBashEncoder::test_named_list_one_named_one_str PASSED [ 98%]
tests/test_script.py::TestBashEncoder::test_named_list_named_is_list PASSED [100%]
=============================== warnings summary ===============================
snakemake/rules.py:13
/builddir/build/BUILD/snakemake-7.18.1/snakemake/rules.py:13: DeprecationWarning: module 'sre_constants' is deprecated
import sre_constants
tests/test_schema.py::test_config
/usr/lib/python3.11/site-packages/google/cloud/storage/blob.py:21: DeprecationWarning: 'cgi' is deprecated and slated for removal in Python 3.13
import cgi
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========== 51 passed, 5 skipped, 3 deselected, 2 warnings in 16.54s ===========
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: snakemake-7.18.1-1.fc38.noarch
Provides: python3.11dist(snakemake) = 7.18.1 python3dist(snakemake) = 7.18.1 snakemake = 7.18.1-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: (python3.11dist(jinja2) < 4~~ with python3.11dist(jinja2) >= 3) (python3.11dist(yte) < 2~~ with python3.11dist(yte) >= 1) /usr/bin/python3 python(abi) = 3.11 python3.11dist(appdirs) python3.11dist(configargparse) python3.11dist(connection-pool) >= 0.0.3 python3.11dist(datrie) python3.11dist(docutils) python3.11dist(gitpython) python3.11dist(jsonschema) python3.11dist(nbformat) python3.11dist(psutil) python3.11dist(pulp) >= 2 python3.11dist(pyyaml) python3.11dist(ratelimiter) python3.11dist(requests) python3.11dist(reretry) python3.11dist(smart-open) >= 3 python3.11dist(stopit) python3.11dist(tabulate) python3.11dist(toposort) python3.11dist(wrapt)
Processing files: snakemake-doc-7.18.1-1.fc38.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.kS635z
+ umask 022
+ cd /builddir/build/BUILD
+ cd snakemake-7.18.1
+ DOCDIR=/builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/share/doc/snakemake-doc
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/share/doc/snakemake-doc
+ cp -pr CHANGELOG.md /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/share/doc/snakemake-doc
+ cp -pr CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/share/doc/snakemake-doc
+ cp -pr README.md /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/share/doc/snakemake-doc
+ cp -pr docs/_build/latex/Snakemake.pdf /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/share/doc/snakemake-doc
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.2WnyO6
+ umask 022
+ cd /builddir/build/BUILD
+ cd snakemake-7.18.1
+ LICENSEDIR=/builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/share/licenses/snakemake-doc
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/share/licenses/snakemake-doc
+ cp -pr LICENSE.md /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64/usr/share/licenses/snakemake-doc
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: snakemake-doc = 7.18.1-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: snakemake+reports-7.18.1-1.fc38.noarch
Provides: python3.11dist(snakemake[reports]) = 7.18.1 python3dist(snakemake[reports]) = 7.18.1 snakemake+reports = 7.18.1-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.11 python3.11dist(jinja2) python3.11dist(pygments)
Processing files: snakemake+messaging-7.18.1-1.fc38.noarch
Provides: python3.11dist(snakemake[messaging]) = 7.18.1 python3dist(snakemake[messaging]) = 7.18.1 snakemake+messaging = 7.18.1-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.11 python3.11dist(slacker)
Processing files: snakemake+google-cloud-7.18.1-1.fc38.noarch
Provides: python3.11dist(snakemake[google-cloud]) = 7.18.1 python3dist(snakemake[google-cloud]) = 7.18.1 snakemake+google-cloud = 7.18.1-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.11 python3.11dist(google-api-python-client) python3.11dist(google-cloud-storage) python3.11dist(google-crc32c) python3.11dist(oauth2client)
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64
Wrote: /builddir/build/SRPMS/snakemake-7.18.1-1.fc38.src.rpm
Wrote: /builddir/build/RPMS/snakemake-doc-7.18.1-1.fc38.noarch.rpm
Wrote: /builddir/build/RPMS/snakemake+reports-7.18.1-1.fc38.noarch.rpm
Wrote: /builddir/build/RPMS/snakemake+messaging-7.18.1-1.fc38.noarch.rpm
Wrote: /builddir/build/RPMS/snakemake+google-cloud-7.18.1-1.fc38.noarch.rpm
Wrote: /builddir/build/RPMS/snakemake-7.18.1-1.fc38.noarch.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.wyH2U1
+ umask 022
+ cd /builddir/build/BUILD
+ cd snakemake-7.18.1
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/snakemake-7.18.1-1.fc38.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.YShlv9
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf snakemake-7.18.1 snakemake-7.18.1.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild snakemake-7.18.1-1.fc38.src.rpm
Finish: build phase for snakemake-7.18.1-1.fc38.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1670526512.550555/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1670526512.550555/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1670526512.550555/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/snakemake-7.18.1-1.fc38.src.rpm) Config(child) 1 minutes 36 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool