Warning: Permanently added '54.87.104.44' (ED25519) to the list of known hosts.
You can reproduce this build on your computer by running:
sudo dnf install copr-rpmbuild
/usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6408290-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64
Version: 0.69
PID: 5717
Logging PID: 5718
Task:
{'appstream': False,
'background': True,
'build_id': 6408290,
'buildroot_pkgs': [],
'chroot': 'fedora-rawhide-aarch64',
'enable_net': False,
'fedora_review': False,
'git_hash': 'b43ac973914abe9602e626ce93aee30180d953cc',
'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/R-Rhtslib',
'isolation': 'default',
'memory_reqs': 2048,
'package_name': 'R-Rhtslib',
'package_version': '1.28.0-4%{dist}',
'project_dirname': 'zlib-ng-compat-mpb',
'project_name': 'zlib-ng-compat-mpb',
'project_owner': 'tuliom',
'repo_priority': None,
'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/tuliom/zlib-ng-compat-mpb/fedora-rawhide-aarch64/',
'id': 'copr_base',
'name': 'Copr repository',
'priority': None}],
'sandbox': 'tuliom/zlib-ng-compat-mpb--tuliom',
'source_json': {},
'source_type': None,
'submitter': 'tuliom',
'tags': [],
'task_id': '6408290-fedora-rawhide-aarch64',
'timeout': 115200,
'uses_devel_repo': False,
'with_opts': [],
'without_opts': []}
Running: git clone https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/R-Rhtslib /var/lib/copr-rpmbuild/workspace/workdir-6gzvj33s/R-Rhtslib --depth 500 --no-single-branch --recursive
cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/R-Rhtslib', '/var/lib/copr-rpmbuild/workspace/workdir-6gzvj33s/R-Rhtslib', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout:
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-6gzvj33s/R-Rhtslib'...
Running: git checkout b43ac973914abe9602e626ce93aee30180d953cc --
cmd: ['git', 'checkout', 'b43ac973914abe9602e626ce93aee30180d953cc', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-6gzvj33s/R-Rhtslib
rc: 0
stdout:
stderr: Note: switching to 'b43ac973914abe9602e626ce93aee30180d953cc'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:
git switch -c <new-branch-name>
Or undo this operation with:
git switch -
Turn off this advice by setting config variable advice.detachedHead to false
HEAD is now at b43ac97 automatic import of R-Rhtslib
Running: copr-distgit-client sources
cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-6gzvj33s/R-Rhtslib
rc: 0
stdout:
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading Rhtslib_1.28.0.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o Rhtslib_1.28.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/tuliom/zlib-ng-compat-mpb/R-Rhtslib/Rhtslib_1.28.0.tar.gz/md5/68bbb8477444f2c8e7bbf7720ece120f/Rhtslib_1.28.0.tar.gz
% Total % Received % Xferd Average Speed Time Time Time Current
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
Dload Upload Total Spent Left Speed
100 1436k 100 1436k 0 0 16.1M 0 --:--:-- --:--:-- --:--:-- 16.3M
INFO: Reading stdout from command: md5sum Rhtslib_1.28.0.tar.gz
Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-6gzvj33s/R-Rhtslib/R-Rhtslib.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-6gzvj33s/R-Rhtslib --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1695197320.022112 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.1.1 starting (python version = 3.11.3, NVR = mock-5.1.1-1.fc38)...
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-6gzvj33s/R-Rhtslib/R-Rhtslib.spec) Config(fedora-rawhide-aarch64)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.1.1
INFO: Mock Version: 5.1.1
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1695197320.022112/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide
INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide
INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1695197320.022112/root
INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture
INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount
INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/f07eb8f6c1dcc11461e9e89137af54e5407d8cc570a8af8b25a4c2f598a309cc/merged
INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/f07eb8f6c1dcc11461e9e89137af54e5407d8cc570a8af8b25a4c2f598a309cc/merged) with podman image umount
INFO: Package manager dnf detected and used (fallback)
INFO: Bootstrap image not marked ready
Start(bootstrap): installing dnf tooling
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 43 MB/s | 6.7 MB 00:00
fedora 48 MB/s | 69 MB 00:01
Last metadata expiration check: 0:00:01 ago on Wed Sep 20 08:08:47 2023.
Package python3-dnf-4.16.2-4.fc40.noarch is already installed.
Dependencies resolved.
================================================================================
Package Arch Version Repository Size
================================================================================
Installing:
python3-dnf-plugins-core noarch 4.4.2-1.fc39 fedora 293 k
Installing dependencies:
dbus-libs aarch64 1:1.14.10-1.fc40 fedora 156 k
python3-dateutil noarch 1:2.8.2-10.fc39 fedora 355 k
python3-dbus aarch64 1.3.2-4.fc39 fedora 157 k
python3-distro noarch 1.8.0-6.fc39 fedora 49 k
python3-six noarch 1.16.0-12.fc39 fedora 41 k
python3-systemd aarch64 235-5.fc39 fedora 107 k
Transaction Summary
================================================================================
Install 7 Packages
Total download size: 1.1 M
Installed size: 4.6 M
Downloading Packages:
(1/7): python3-dateutil-2.8.2-10.fc39.noarch.rp 14 MB/s | 355 kB 00:00
(2/7): python3-dbus-1.3.2-4.fc39.aarch64.rpm 6.2 MB/s | 157 kB 00:00
(3/7): python3-dnf-plugins-core-4.4.2-1.fc39.no 26 MB/s | 293 kB 00:00
(4/7): python3-distro-1.8.0-6.fc39.noarch.rpm 4.1 MB/s | 49 kB 00:00
(5/7): python3-six-1.16.0-12.fc39.noarch.rpm 11 MB/s | 41 kB 00:00
(6/7): python3-systemd-235-5.fc39.aarch64.rpm 1.5 MB/s | 107 kB 00:00
(7/7): dbus-libs-1.14.10-1.fc40.aarch64.rpm 1.2 MB/s | 156 kB 00:00
--------------------------------------------------------------------------------
Total 788 kB/s | 1.1 MB 00:01
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Preparing : 1/1
Installing : python3-systemd-235-5.fc39.aarch64 1/7
Installing : python3-six-1.16.0-12.fc39.noarch 2/7
Installing : python3-dateutil-1:2.8.2-10.fc39.noarch 3/7
Installing : python3-distro-1.8.0-6.fc39.noarch 4/7
Installing : dbus-libs-1:1.14.10-1.fc40.aarch64 5/7
Installing : python3-dbus-1.3.2-4.fc39.aarch64 6/7
Installing : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 7/7
Running scriptlet: python3-dnf-plugins-core-4.4.2-1.fc39.noarch 7/7
Verifying : dbus-libs-1:1.14.10-1.fc40.aarch64 1/7
Verifying : python3-dateutil-1:2.8.2-10.fc39.noarch 2/7
Verifying : python3-dbus-1.3.2-4.fc39.aarch64 3/7
Verifying : python3-distro-1.8.0-6.fc39.noarch 4/7
Verifying : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 5/7
Verifying : python3-six-1.16.0-12.fc39.noarch 6/7
Verifying : python3-systemd-235-5.fc39.aarch64 7/7
Installed:
dbus-libs-1:1.14.10-1.fc40.aarch64
python3-dateutil-1:2.8.2-10.fc39.noarch
python3-dbus-1.3.2-4.fc39.aarch64
python3-distro-1.8.0-6.fc39.noarch
python3-dnf-plugins-core-4.4.2-1.fc39.noarch
python3-six-1.16.0-12.fc39.noarch
python3-systemd-235-5.fc39.aarch64
Complete!
Finish(bootstrap): installing dnf tooling
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1695197320.022112/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf detected and used (direct choice)
Start: installing minimal buildroot with dnf
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 119 MB/s | 6.7 MB 00:00
fedora 49 MB/s | 69 MB 00:01
Last metadata expiration check: 0:00:01 ago on Wed Sep 20 08:09:13 2023.
Dependencies resolved.
================================================================================
Package Arch Version Repo Size
================================================================================
Installing group/module packages:
bash aarch64 5.2.15-5.fc39 fedora 1.8 M
bzip2 aarch64 1.0.8-16.fc39 fedora 52 k
coreutils aarch64 9.4-1.fc40 fedora 1.2 M
cpio aarch64 2.14-4.fc39 fedora 277 k
diffutils aarch64 3.10-3.fc39 fedora 396 k
fedora-release-common noarch 40-0.7 fedora 18 k
findutils aarch64 1:4.9.0-6.fc40 fedora 495 k
gawk aarch64 5.2.2-2.fc39 fedora 1.1 M
glibc-minimal-langpack aarch64 2.38.9000-9.fc40 fedora 74 k
grep aarch64 3.11-5.fc40 fedora 296 k
gzip aarch64 1.12-6.fc39 fedora 164 k
info aarch64 7.0.3-3.fc39 fedora 179 k
patch aarch64 2.7.6-22.fc39 fedora 123 k
redhat-rpm-config noarch 270-1.fc40 copr_base 74 k
rpm-build aarch64 4.18.99-1.fc40 copr_base 72 k
sed aarch64 4.8-14.fc39 fedora 304 k
shadow-utils aarch64 2:4.14.0-1.fc40 fedora 1.3 M
tar aarch64 2:1.35-2.fc40 fedora 854 k
unzip aarch64 6.0-62.fc39 fedora 183 k
util-linux aarch64 2.39.2-1.fc40 copr_base 1.1 M
which aarch64 2.21-40.fc39 fedora 42 k
xz aarch64 5.4.4-1.fc39 fedora 556 k
Installing dependencies:
alternatives aarch64 1.25-1.fc39 fedora 38 k
ansible-srpm-macros noarch 1-11.fc39 fedora 21 k
audit-libs aarch64 3.1.2-4.fc40 fedora 118 k
authselect aarch64 1.4.2-3.fc39 fedora 144 k
authselect-libs aarch64 1.4.2-3.fc39 fedora 249 k
basesystem noarch 11-18.fc39 fedora 7.2 k
binutils aarch64 2.41-5.fc40 fedora 6.7 M
binutils-gold aarch64 2.41-5.fc40 fedora 948 k
bzip2-libs aarch64 1.0.8-16.fc39 fedora 43 k
ca-certificates noarch 2023.2.60_v7.0.306-3.fc40 fedora 837 k
coreutils-common aarch64 9.4-1.fc40 fedora 2.1 M
cracklib aarch64 2.9.11-2.fc40 copr_base 84 k
crypto-policies noarch 20230731-1.git5ed06e0.fc39 fedora 99 k
curl aarch64 8.3.0-1.fc40 copr_base 350 k
cyrus-sasl-lib aarch64 2.1.28-11.fc40 copr_base 781 k
debugedit aarch64 5.0-10.fc39 fedora 77 k
dwz aarch64 0.15-3.fc39 fedora 136 k
ed aarch64 1.19-4.fc39 fedora 78 k
efi-srpm-macros noarch 5-9.fc39 fedora 22 k
elfutils aarch64 0.189-6.fc40 fedora 539 k
elfutils-debuginfod-client aarch64 0.189-6.fc40 fedora 38 k
elfutils-default-yama-scope noarch 0.189-6.fc40 fedora 13 k
elfutils-libelf aarch64 0.189-6.fc40 fedora 194 k
elfutils-libs aarch64 0.189-6.fc40 fedora 258 k
fedora-gpg-keys noarch 40-0.1 fedora 130 k
fedora-release noarch 40-0.7 fedora 8.0 k
fedora-release-identity-basic
noarch 40-0.7 fedora 8.8 k
fedora-repos noarch 40-0.1 fedora 9.4 k
fedora-repos-rawhide noarch 40-0.1 fedora 9.0 k
file aarch64 5.45-1.fc40 copr_base 50 k
file-libs aarch64 5.45-1.fc40 copr_base 762 k
filesystem aarch64 3.18-6.fc39 fedora 1.1 M
fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k
forge-srpm-macros noarch 0.1.0-1.fc40 fedora 18 k
fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k
gdb-minimal aarch64 13.2-9.fc40 fedora 3.8 M
gdbm-libs aarch64 1:1.23-4.fc39 fedora 56 k
ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k
glibc aarch64 2.38.9000-9.fc40 fedora 1.7 M
glibc-common aarch64 2.38.9000-9.fc40 fedora 351 k
glibc-gconv-extra aarch64 2.38.9000-9.fc40 fedora 2.0 M
gmp aarch64 1:6.2.1-5.fc39 fedora 266 k
gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k
go-srpm-macros noarch 3.2.0-7.fc40 fedora 27 k
jansson aarch64 2.13.1-7.fc39 fedora 46 k
kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k
keyutils-libs aarch64 1.6.1-7.fc39 fedora 31 k
krb5-libs aarch64 1.21.2-1.fc40 fedora 772 k
libacl aarch64 2.3.1-9.fc40 fedora 23 k
libarchive aarch64 3.7.2-1.fc40 copr_base 403 k
libattr aarch64 2.5.1-9.fc40 fedora 18 k
libblkid aarch64 2.39.2-1.fc40 copr_base 116 k
libbrotli aarch64 1.1.0-1.fc40 fedora 344 k
libcap aarch64 2.48-7.fc39 fedora 68 k
libcap-ng aarch64 0.8.3-8.fc40 fedora 32 k
libcom_err aarch64 1.47.0-2.fc39 fedora 26 k
libcurl aarch64 8.3.0-1.fc40 copr_base 337 k
libdb aarch64 5.3.28-58.fc40 copr_base 735 k
libeconf aarch64 0.5.2-1.fc40 fedora 30 k
libevent aarch64 2.1.12-9.fc39 fedora 254 k
libfdisk aarch64 2.39.2-1.fc40 copr_base 158 k
libffi aarch64 3.4.4-4.fc39 fedora 38 k
libgcc aarch64 13.2.1-1.fc40 copr_base 94 k
libgomp aarch64 13.2.1-1.fc40 copr_base 311 k
libidn2 aarch64 2.3.4-3.fc39 fedora 118 k
libmount aarch64 2.39.2-1.fc40 copr_base 153 k
libnghttp2 aarch64 1.56.0-1.fc40 copr_base 76 k
libnsl2 aarch64 2.0.0-6.fc39 fedora 30 k
libpkgconf aarch64 1.9.5-2.fc39 fedora 38 k
libpsl aarch64 0.21.2-4.fc39 fedora 63 k
libpwquality aarch64 1.4.5-6.fc39 fedora 120 k
libselinux aarch64 3.5-5.fc39 fedora 86 k
libsemanage aarch64 3.5-4.fc39 fedora 117 k
libsepol aarch64 3.5-2.fc39 fedora 311 k
libsigsegv aarch64 2.14-5.fc39 fedora 27 k
libsmartcols aarch64 2.39.2-1.fc40 copr_base 66 k
libssh aarch64 0.10.5-2.fc40 copr_base 212 k
libssh-config noarch 0.10.5-2.fc40 copr_base 9.7 k
libstdc++ aarch64 13.2.1-1.fc40 copr_base 810 k
libtasn1 aarch64 4.19.0-3.fc39 fedora 73 k
libtirpc aarch64 1.3.3-1.rc2.fc39 fedora 95 k
libunistring aarch64 1.1-5.fc40 fedora 540 k
libutempter aarch64 1.2.1-10.fc39 fedora 27 k
libuuid aarch64 2.39.2-1.fc40 copr_base 28 k
libverto aarch64 0.3.2-6.fc39 fedora 21 k
libxcrypt aarch64 4.4.36-2.fc39 fedora 123 k
libxml2 aarch64 2.11.5-1.fc40 copr_base 687 k
libzstd aarch64 1.5.5-4.fc40 copr_base 281 k
lua-libs aarch64 5.4.6-3.fc39 fedora 131 k
lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k
lz4-libs aarch64 1.9.4-4.fc39 fedora 68 k
mpfr aarch64 4.2.0-3.fc39 fedora 319 k
ncurses-base noarch 6.4-7.20230520.fc40 fedora 88 k
ncurses-libs aarch64 6.4-7.20230520.fc40 fedora 326 k
ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k
openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k
openldap aarch64 2.6.6-1.fc39 fedora 251 k
openssl-libs aarch64 1:3.1.1-4.fc40 copr_base 2.0 M
p11-kit aarch64 0.25.0-2.fc39 fedora 481 k
p11-kit-trust aarch64 0.25.0-2.fc39 fedora 140 k
package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k
pam aarch64 1.5.3-2.fc39 fedora 558 k
pam-libs aarch64 1.5.3-2.fc39 fedora 58 k
pcre2 aarch64 10.42-1.fc39.2 fedora 219 k
pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k
perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k
pkgconf aarch64 1.9.5-2.fc39 fedora 42 k
pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k
pkgconf-pkg-config aarch64 1.9.5-2.fc39 fedora 9.6 k
popt aarch64 1.19-3.fc39 fedora 66 k
publicsuffix-list-dafsa noarch 20230812-1.fc40 fedora 57 k
pyproject-srpm-macros noarch 1.9.0-2.fc39 fedora 14 k
python-srpm-macros noarch 3.12-4.fc40 fedora 25 k
qt5-srpm-macros noarch 5.15.10-2.fc39 fedora 8.3 k
qt6-srpm-macros noarch 6.5.2-2.fc39 fedora 9.2 k
readline aarch64 8.2-4.fc39 fedora 211 k
rpm aarch64 4.18.99-1.fc40 copr_base 509 k
rpm-build-libs aarch64 4.18.99-1.fc40 copr_base 92 k
rpm-libs aarch64 4.18.99-1.fc40 copr_base 306 k
rpm-sequoia aarch64 1.5.0-1.fc40 fedora 842 k
rust-srpm-macros noarch 24-5.fc40 fedora 12 k
setup noarch 2.14.4-1.fc39 fedora 154 k
sqlite-libs aarch64 3.43.1-1.fc40 fedora 679 k
systemd-libs aarch64 254.2-7.fc40 fedora 668 k
tzdata noarch 2023c-3.fc40 fedora 718 k
util-linux-core aarch64 2.39.2-1.fc40 copr_base 477 k
xxhash-libs aarch64 0.8.2-1.fc39 fedora 35 k
xz-libs aarch64 5.4.4-1.fc39 fedora 106 k
zip aarch64 3.0-39.fc40 fedora 262 k
zlib-ng-compat aarch64 2.1.3-4.fc40 copr_base 66 k
zstd aarch64 1.5.5-4.fc40 copr_base 446 k
Installing Groups:
Buildsystem building group
Transaction Summary
================================================================================
Install 153 Packages
Total download size: 53 M
Installed size: 304 M
Downloading Packages:
(1/153): cracklib-2.9.11-2.fc40.aarch64.rpm 4.8 MB/s | 84 kB 00:00
(2/153): curl-8.3.0-1.fc40.aarch64.rpm 18 MB/s | 350 kB 00:00
(3/153): file-5.45-1.fc40.aarch64.rpm 20 MB/s | 50 kB 00:00
(4/153): file-libs-5.45-1.fc40.aarch64.rpm 149 MB/s | 762 kB 00:00
(5/153): libarchive-3.7.2-1.fc40.aarch64.rpm 78 MB/s | 403 kB 00:00
(6/153): cyrus-sasl-lib-2.1.28-11.fc40.aarch64. 29 MB/s | 781 kB 00:00
(7/153): libblkid-2.39.2-1.fc40.aarch64.rpm 50 MB/s | 116 kB 00:00
(8/153): libcurl-8.3.0-1.fc40.aarch64.rpm 98 MB/s | 337 kB 00:00
(9/153): libdb-5.3.28-58.fc40.aarch64.rpm 159 MB/s | 735 kB 00:00
(10/153): libfdisk-2.39.2-1.fc40.aarch64.rpm 43 MB/s | 158 kB 00:00
(11/153): libgcc-13.2.1-1.fc40.aarch64.rpm 49 MB/s | 94 kB 00:00
(12/153): libgomp-13.2.1-1.fc40.aarch64.rpm 129 MB/s | 311 kB 00:00
(13/153): libmount-2.39.2-1.fc40.aarch64.rpm 43 MB/s | 153 kB 00:00
(14/153): libnghttp2-1.56.0-1.fc40.aarch64.rpm 23 MB/s | 76 kB 00:00
(15/153): libsmartcols-2.39.2-1.fc40.aarch64.rp 26 MB/s | 66 kB 00:00
(16/153): libssh-0.10.5-2.fc40.aarch64.rpm 92 MB/s | 212 kB 00:00
(17/153): libssh-config-0.10.5-2.fc40.noarch.rp 4.1 MB/s | 9.7 kB 00:00
(18/153): libstdc++-13.2.1-1.fc40.aarch64.rpm 168 MB/s | 810 kB 00:00
(19/153): libuuid-2.39.2-1.fc40.aarch64.rpm 7.9 MB/s | 28 kB 00:00
(20/153): libxml2-2.11.5-1.fc40.aarch64.rpm 124 MB/s | 687 kB 00:00
(21/153): libzstd-1.5.5-4.fc40.aarch64.rpm 79 MB/s | 281 kB 00:00
(22/153): redhat-rpm-config-270-1.fc40.noarch.r 16 MB/s | 74 kB 00:00
(23/153): openssl-libs-3.1.1-4.fc40.aarch64.rpm 183 MB/s | 2.0 MB 00:00
(24/153): rpm-4.18.99-1.fc40.aarch64.rpm 61 MB/s | 509 kB 00:00
(25/153): rpm-build-4.18.99-1.fc40.aarch64.rpm 21 MB/s | 72 kB 00:00
(26/153): rpm-build-libs-4.18.99-1.fc40.aarch64 58 MB/s | 92 kB 00:00
(27/153): rpm-libs-4.18.99-1.fc40.aarch64.rpm 89 MB/s | 306 kB 00:00
(28/153): util-linux-2.39.2-1.fc40.aarch64.rpm 156 MB/s | 1.1 MB 00:00
(29/153): util-linux-core-2.39.2-1.fc40.aarch64 84 MB/s | 477 kB 00:00
(30/153): zlib-ng-compat-2.1.3-4.fc40.aarch64.r 26 MB/s | 66 kB 00:00
(31/153): zstd-1.5.5-4.fc40.aarch64.rpm 155 MB/s | 446 kB 00:00
(32/153): ansible-srpm-macros-1-11.fc39.noarch. 1.8 MB/s | 21 kB 00:00
(33/153): alternatives-1.25-1.fc39.aarch64.rpm 3.0 MB/s | 38 kB 00:00
(34/153): audit-libs-3.1.2-4.fc40.aarch64.rpm 9.3 MB/s | 118 kB 00:00
(35/153): authselect-1.4.2-3.fc39.aarch64.rpm 18 MB/s | 144 kB 00:00
(36/153): basesystem-11-18.fc39.noarch.rpm 1.6 MB/s | 7.2 kB 00:00
(37/153): authselect-libs-1.4.2-3.fc39.aarch64. 26 MB/s | 249 kB 00:00
(38/153): binutils-gold-2.41-5.fc40.aarch64.rpm 22 MB/s | 948 kB 00:00
(39/153): bzip2-1.0.8-16.fc39.aarch64.rpm 6.9 MB/s | 52 kB 00:00
(40/153): bzip2-libs-1.0.8-16.fc39.aarch64.rpm 12 MB/s | 43 kB 00:00
(41/153): bash-5.2.15-5.fc39.aarch64.rpm 29 MB/s | 1.8 MB 00:00
(42/153): coreutils-9.4-1.fc40.aarch64.rpm 129 MB/s | 1.2 MB 00:00
(43/153): ca-certificates-2023.2.60_v7.0.306-3. 44 MB/s | 837 kB 00:00
(44/153): cpio-2.14-4.fc39.aarch64.rpm 35 MB/s | 277 kB 00:00
(45/153): binutils-2.41-5.fc40.aarch64.rpm 76 MB/s | 6.7 MB 00:00
(46/153): crypto-policies-20230731-1.git5ed06e0 13 MB/s | 99 kB 00:00
(47/153): debugedit-5.0-10.fc39.aarch64.rpm 13 MB/s | 77 kB 00:00
(48/153): diffutils-3.10-3.fc39.aarch64.rpm 29 MB/s | 396 kB 00:00
(49/153): dwz-0.15-3.fc39.aarch64.rpm 16 MB/s | 136 kB 00:00
(50/153): efi-srpm-macros-5-9.fc39.noarch.rpm 8.5 MB/s | 22 kB 00:00
(51/153): elfutils-0.189-6.fc40.aarch64.rpm 21 MB/s | 539 kB 00:00
(52/153): elfutils-debuginfod-client-0.189-6.fc 13 MB/s | 38 kB 00:00
(53/153): coreutils-common-9.4-1.fc40.aarch64.r 33 MB/s | 2.1 MB 00:00
(54/153): elfutils-default-yama-scope-0.189-6.f 3.6 MB/s | 13 kB 00:00
(55/153): elfutils-libs-0.189-6.fc40.aarch64.rp 67 MB/s | 258 kB 00:00
(56/153): elfutils-libelf-0.189-6.fc40.aarch64. 29 MB/s | 194 kB 00:00
(57/153): fedora-release-40-0.7.noarch.rpm 2.7 MB/s | 8.0 kB 00:00
(58/153): fedora-release-common-40-0.7.noarch.r 6.3 MB/s | 18 kB 00:00
(59/153): fedora-release-identity-basic-40-0.7. 3.7 MB/s | 8.8 kB 00:00
(60/153): fedora-repos-40-0.1.noarch.rpm 4.4 MB/s | 9.4 kB 00:00
(61/153): fedora-repos-rawhide-40-0.1.noarch.rp 3.6 MB/s | 9.0 kB 00:00
(62/153): filesystem-3.18-6.fc39.aarch64.rpm 123 MB/s | 1.1 MB 00:00
(63/153): findutils-4.9.0-6.fc40.aarch64.rpm 44 MB/s | 495 kB 00:00
(64/153): fonts-srpm-macros-2.0.5-12.fc39.noarc 9.7 MB/s | 26 kB 00:00
(65/153): forge-srpm-macros-0.1.0-1.fc40.noarch 6.9 MB/s | 18 kB 00:00
(66/153): fpc-srpm-macros-1.3-8.fc39.noarch.rpm 3.5 MB/s | 7.4 kB 00:00
(67/153): gawk-5.2.2-2.fc39.aarch64.rpm 54 MB/s | 1.1 MB 00:00
(68/153): ed-1.19-4.fc39.aarch64.rpm 487 kB/s | 78 kB 00:00
(69/153): fedora-gpg-keys-40-0.1.noarch.rpm 1.0 MB/s | 130 kB 00:00
(70/153): gdbm-libs-1.23-4.fc39.aarch64.rpm 17 MB/s | 56 kB 00:00
(71/153): ghc-srpm-macros-1.6.1-2.fc39.noarch.r 2.6 MB/s | 7.8 kB 00:00
(72/153): gdb-minimal-13.2-9.fc40.aarch64.rpm 56 MB/s | 3.8 MB 00:00
(73/153): glibc-common-2.38.9000-9.fc40.aarch64 18 MB/s | 351 kB 00:00
(74/153): glibc-minimal-langpack-2.38.9000-9.fc 15 MB/s | 74 kB 00:00
(75/153): gmp-6.2.1-5.fc39.aarch64.rpm 34 MB/s | 266 kB 00:00
(76/153): gnat-srpm-macros-6-3.fc39.noarch.rpm 4.1 MB/s | 8.8 kB 00:00
(77/153): glibc-2.38.9000-9.fc40.aarch64.rpm 46 MB/s | 1.7 MB 00:00
(78/153): go-srpm-macros-3.2.0-7.fc40.noarch.rp 8.4 MB/s | 27 kB 00:00
(79/153): glibc-gconv-extra-2.38.9000-9.fc40.aa 49 MB/s | 2.0 MB 00:00
(80/153): grep-3.11-5.fc40.aarch64.rpm 31 MB/s | 296 kB 00:00
(81/153): jansson-2.13.1-7.fc39.aarch64.rpm 10 MB/s | 46 kB 00:00
(82/153): info-7.0.3-3.fc39.aarch64.rpm 31 MB/s | 179 kB 00:00
(83/153): kernel-srpm-macros-1.0-20.fc39.noarch 4.1 MB/s | 10 kB 00:00
(84/153): keyutils-libs-1.6.1-7.fc39.aarch64.rp 9.2 MB/s | 31 kB 00:00
(85/153): libacl-2.3.1-9.fc40.aarch64.rpm 7.8 MB/s | 23 kB 00:00
(86/153): libattr-2.5.1-9.fc40.aarch64.rpm 5.8 MB/s | 18 kB 00:00
(87/153): gzip-1.12-6.fc39.aarch64.rpm 6.4 MB/s | 164 kB 00:00
(88/153): libcap-2.48-7.fc39.aarch64.rpm 16 MB/s | 68 kB 00:00
(89/153): libcap-ng-0.8.3-8.fc40.aarch64.rpm 9.6 MB/s | 32 kB 00:00
(90/153): krb5-libs-1.21.2-1.fc40.aarch64.rpm 40 MB/s | 772 kB 00:00
(91/153): libcom_err-1.47.0-2.fc39.aarch64.rpm 7.0 MB/s | 26 kB 00:00
(92/153): libeconf-0.5.2-1.fc40.aarch64.rpm 8.7 MB/s | 30 kB 00:00
(93/153): libbrotli-1.1.0-1.fc40.aarch64.rpm 19 MB/s | 344 kB 00:00
(94/153): libffi-3.4.4-4.fc39.aarch64.rpm 11 MB/s | 38 kB 00:00
(95/153): libevent-2.1.12-9.fc39.aarch64.rpm 34 MB/s | 254 kB 00:00
(96/153): libnsl2-2.0.0-6.fc39.aarch64.rpm 7.2 MB/s | 30 kB 00:00
(97/153): libidn2-2.3.4-3.fc39.aarch64.rpm 21 MB/s | 118 kB 00:00
(98/153): libpkgconf-1.9.5-2.fc39.aarch64.rpm 11 MB/s | 38 kB 00:00
(99/153): libpsl-0.21.2-4.fc39.aarch64.rpm 16 MB/s | 63 kB 00:00
(100/153): libselinux-3.5-5.fc39.aarch64.rpm 19 MB/s | 86 kB 00:00
(101/153): libsemanage-3.5-4.fc39.aarch64.rpm 19 MB/s | 117 kB 00:00
(102/153): libpwquality-1.4.5-6.fc39.aarch64.rp 7.4 MB/s | 120 kB 00:00
(103/153): libsigsegv-2.14-5.fc39.aarch64.rpm 3.8 MB/s | 27 kB 00:00
(104/153): libtirpc-1.3.3-1.rc2.fc39.aarch64.rp 28 MB/s | 95 kB 00:00
(105/153): libsepol-3.5-2.fc39.aarch64.rpm 16 MB/s | 311 kB 00:00
(106/153): libtasn1-4.19.0-3.fc39.aarch64.rpm 7.9 MB/s | 73 kB 00:00
(107/153): libutempter-1.2.1-10.fc39.aarch64.rp 8.2 MB/s | 27 kB 00:00
(108/153): libverto-0.3.2-6.fc39.aarch64.rpm 7.3 MB/s | 21 kB 00:00
(109/153): libxcrypt-4.4.36-2.fc39.aarch64.rpm 28 MB/s | 123 kB 00:00
(110/153): lua-libs-5.4.6-3.fc39.aarch64.rpm 27 MB/s | 131 kB 00:00
(111/153): libunistring-1.1-5.fc40.aarch64.rpm 37 MB/s | 540 kB 00:00
(112/153): lua-srpm-macros-1-9.fc39.noarch.rpm 4.4 MB/s | 8.6 kB 00:00
(113/153): lz4-libs-1.9.4-4.fc39.aarch64.rpm 17 MB/s | 68 kB 00:00
(114/153): mpfr-4.2.0-3.fc39.aarch64.rpm 68 MB/s | 319 kB 00:00
(115/153): ocaml-srpm-macros-8-2.fc39.noarch.rp 5.4 MB/s | 14 kB 00:00
(116/153): ncurses-base-6.4-7.20230520.fc40.noa 11 MB/s | 88 kB 00:00
(117/153): openblas-srpm-macros-2-14.fc39.noarc 2.8 MB/s | 7.5 kB 00:00
(118/153): ncurses-libs-6.4-7.20230520.fc40.aar 41 MB/s | 326 kB 00:00
(119/153): p11-kit-trust-0.25.0-2.fc39.aarch64. 27 MB/s | 140 kB 00:00
(120/153): openldap-2.6.6-1.fc39.aarch64.rpm 24 MB/s | 251 kB 00:00
(121/153): package-notes-srpm-macros-0.5-9.fc39 3.5 MB/s | 11 kB 00:00
(122/153): p11-kit-0.25.0-2.fc39.aarch64.rpm 34 MB/s | 481 kB 00:00
(123/153): pam-libs-1.5.3-2.fc39.aarch64.rpm 12 MB/s | 58 kB 00:00
(124/153): patch-2.7.6-22.fc39.aarch64.rpm 26 MB/s | 123 kB 00:00
(125/153): pcre2-syntax-10.42-1.fc39.2.noarch.r 37 MB/s | 143 kB 00:00
(126/153): perl-srpm-macros-1-51.fc39.noarch.rp 3.7 MB/s | 8.0 kB 00:00
(127/153): pcre2-10.42-1.fc39.2.aarch64.rpm 18 MB/s | 219 kB 00:00
(128/153): pam-1.5.3-2.fc39.aarch64.rpm 26 MB/s | 558 kB 00:00
(129/153): pkgconf-1.9.5-2.fc39.aarch64.rpm 7.9 MB/s | 42 kB 00:00
(130/153): pkgconf-m4-1.9.5-2.fc39.noarch.rpm 4.2 MB/s | 14 kB 00:00
(131/153): pkgconf-pkg-config-1.9.5-2.fc39.aarc 4.3 MB/s | 9.6 kB 00:00
(132/153): publicsuffix-list-dafsa-20230812-1.f 14 MB/s | 57 kB 00:00
(133/153): popt-1.19-3.fc39.aarch64.rpm 13 MB/s | 66 kB 00:00
(134/153): pyproject-srpm-macros-1.9.0-2.fc39.n 3.9 MB/s | 14 kB 00:00
(135/153): qt6-srpm-macros-6.5.2-2.fc39.noarch. 3.3 MB/s | 9.2 kB 00:00
(136/153): python-srpm-macros-3.12-4.fc40.noarc 5.6 MB/s | 25 kB 00:00
(137/153): qt5-srpm-macros-5.15.10-2.fc39.noarc 1.3 MB/s | 8.3 kB 00:00
(138/153): rust-srpm-macros-24-5.fc40.noarch.rp 3.8 MB/s | 12 kB 00:00
(139/153): readline-8.2-4.fc39.aarch64.rpm 28 MB/s | 211 kB 00:00
(140/153): sed-4.8-14.fc39.aarch64.rpm 72 MB/s | 304 kB 00:00
(141/153): rpm-sequoia-1.5.0-1.fc40.aarch64.rpm 46 MB/s | 842 kB 00:00
(142/153): shadow-utils-4.14.0-1.fc40.aarch64.r 142 MB/s | 1.3 MB 00:00
(143/153): setup-2.14.4-1.fc39.noarch.rpm 10 MB/s | 154 kB 00:00
(144/153): sqlite-libs-3.43.1-1.fc40.aarch64.rp 44 MB/s | 679 kB 00:00
(145/153): systemd-libs-254.2-7.fc40.aarch64.rp 43 MB/s | 668 kB 00:00
(146/153): tar-1.35-2.fc40.aarch64.rpm 49 MB/s | 854 kB 00:00
(147/153): unzip-6.0-62.fc39.aarch64.rpm 30 MB/s | 183 kB 00:00
(148/153): which-2.21-40.fc39.aarch64.rpm 9.8 MB/s | 42 kB 00:00
(149/153): xxhash-libs-0.8.2-1.fc39.aarch64.rpm 9.4 MB/s | 35 kB 00:00
(150/153): tzdata-2023c-3.fc40.noarch.rpm 49 MB/s | 718 kB 00:00
(151/153): xz-libs-5.4.4-1.fc39.aarch64.rpm 14 MB/s | 106 kB 00:00
(152/153): zip-3.0-39.fc40.aarch64.rpm 21 MB/s | 262 kB 00:00
(153/153): xz-5.4.4-1.fc39.aarch64.rpm 25 MB/s | 556 kB 00:00
--------------------------------------------------------------------------------
Total 84 MB/s | 53 MB 00:00
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0xA15B79CC:
Userid : "Fedora (40) <fedora-40-primary@fedoraproject.org>"
Fingerprint: 115D F9AE F857 853E E844 5D0A 0727 707E A15B 79CC
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary
Key imported successfully
fedora 1.6 MB/s | 1.6 kB 00:00
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0x18B8E74C:
Userid : "Fedora (39) <fedora-39-primary@fedoraproject.org>"
Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Running scriptlet: filesystem-3.18-6.fc39.aarch64 1/1
Preparing : 1/1
Installing : libgcc-13.2.1-1.fc40.aarch64 1/153
Running scriptlet: libgcc-13.2.1-1.fc40.aarch64 1/153
Installing : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 2/153
Running scriptlet: crypto-policies-20230731-1.git5ed06e0.fc39.noarc 2/153
Installing : tzdata-2023c-3.fc40.noarch 3/153
Installing : fedora-release-identity-basic-40-0.7.noarch 4/153
Installing : fedora-repos-rawhide-40-0.1.noarch 5/153
Installing : fedora-gpg-keys-40-0.1.noarch 6/153
Installing : fedora-repos-40-0.1.noarch 7/153
Installing : fedora-release-common-40-0.7.noarch 8/153
Installing : fedora-release-40-0.7.noarch 9/153
Installing : setup-2.14.4-1.fc39.noarch 10/153
warning: /etc/hosts created as /etc/hosts.rpmnew
Running scriptlet: setup-2.14.4-1.fc39.noarch 10/153
Installing : filesystem-3.18-6.fc39.aarch64 11/153
Installing : basesystem-11-18.fc39.noarch 12/153
Installing : rust-srpm-macros-24-5.fc40.noarch 13/153
Installing : qt6-srpm-macros-6.5.2-2.fc39.noarch 14/153
Installing : qt5-srpm-macros-5.15.10-2.fc39.noarch 15/153
Installing : pyproject-srpm-macros-1.9.0-2.fc39.noarch 16/153
Installing : publicsuffix-list-dafsa-20230812-1.fc40.noarch 17/153
Installing : pkgconf-m4-1.9.5-2.fc39.noarch 18/153
Installing : perl-srpm-macros-1-51.fc39.noarch 19/153
Installing : pcre2-syntax-10.42-1.fc39.2.noarch 20/153
Installing : package-notes-srpm-macros-0.5-9.fc39.noarch 21/153
Installing : openblas-srpm-macros-2-14.fc39.noarch 22/153
Installing : ocaml-srpm-macros-8-2.fc39.noarch 23/153
Installing : ncurses-base-6.4-7.20230520.fc40.noarch 24/153
Installing : glibc-gconv-extra-2.38.9000-9.fc40.aarch64 25/153
Running scriptlet: glibc-gconv-extra-2.38.9000-9.fc40.aarch64 25/153
Installing : glibc-minimal-langpack-2.38.9000-9.fc40.aarch64 26/153
Installing : glibc-common-2.38.9000-9.fc40.aarch64 27/153
Running scriptlet: glibc-2.38.9000-9.fc40.aarch64 28/153
Installing : glibc-2.38.9000-9.fc40.aarch64 28/153
Running scriptlet: glibc-2.38.9000-9.fc40.aarch64 28/153
Installing : ncurses-libs-6.4-7.20230520.fc40.aarch64 29/153
Installing : bash-5.2.15-5.fc39.aarch64 30/153
Running scriptlet: bash-5.2.15-5.fc39.aarch64 30/153
Installing : zlib-ng-compat-2.1.3-4.fc40.aarch64 31/153
Installing : xz-libs-5.4.4-1.fc39.aarch64 32/153
Installing : bzip2-libs-1.0.8-16.fc39.aarch64 33/153
Installing : libstdc++-13.2.1-1.fc40.aarch64 34/153
Installing : libuuid-2.39.2-1.fc40.aarch64 35/153
Installing : libzstd-1.5.5-4.fc40.aarch64 36/153
Installing : elfutils-libelf-0.189-6.fc40.aarch64 37/153
Installing : popt-1.19-3.fc39.aarch64 38/153
Installing : libblkid-2.39.2-1.fc40.aarch64 39/153
Installing : readline-8.2-4.fc39.aarch64 40/153
Installing : gmp-1:6.2.1-5.fc39.aarch64 41/153
Installing : libattr-2.5.1-9.fc40.aarch64 42/153
Installing : libacl-2.3.1-9.fc40.aarch64 43/153
Installing : libcap-2.48-7.fc39.aarch64 44/153
Installing : libxcrypt-4.4.36-2.fc39.aarch64 45/153
Installing : lz4-libs-1.9.4-4.fc39.aarch64 46/153
Installing : systemd-libs-254.2-7.fc40.aarch64 47/153
Installing : mpfr-4.2.0-3.fc39.aarch64 48/153
Installing : dwz-0.15-3.fc39.aarch64 49/153
Installing : unzip-6.0-62.fc39.aarch64 50/153
Installing : file-libs-5.45-1.fc40.aarch64 51/153
Installing : file-5.45-1.fc40.aarch64 52/153
Installing : libsmartcols-2.39.2-1.fc40.aarch64 53/153
Installing : alternatives-1.25-1.fc39.aarch64 54/153
Installing : jansson-2.13.1-7.fc39.aarch64 55/153
Installing : libcap-ng-0.8.3-8.fc40.aarch64 56/153
Installing : audit-libs-3.1.2-4.fc40.aarch64 57/153
Installing : pam-libs-1.5.3-2.fc39.aarch64 58/153
Installing : libcom_err-1.47.0-2.fc39.aarch64 59/153
Installing : libsepol-3.5-2.fc39.aarch64 60/153
Installing : libunistring-1.1-5.fc40.aarch64 61/153
Installing : libidn2-2.3.4-3.fc39.aarch64 62/153
Installing : lua-libs-5.4.6-3.fc39.aarch64 63/153
Installing : pcre2-10.42-1.fc39.2.aarch64 64/153
Installing : libselinux-3.5-5.fc39.aarch64 65/153
Installing : sed-4.8-14.fc39.aarch64 66/153
Installing : grep-3.11-5.fc40.aarch64 67/153
Installing : findutils-1:4.9.0-6.fc40.aarch64 68/153
Installing : xz-5.4.4-1.fc39.aarch64 69/153
Installing : libmount-2.39.2-1.fc40.aarch64 70/153
Installing : util-linux-core-2.39.2-1.fc40.aarch64 71/153
Installing : libsemanage-3.5-4.fc39.aarch64 72/153
Installing : tar-2:1.35-2.fc40.aarch64 73/153
Installing : libpsl-0.21.2-4.fc39.aarch64 74/153
Installing : zip-3.0-39.fc40.aarch64 75/153
Installing : zstd-1.5.5-4.fc40.aarch64 76/153
Installing : libfdisk-2.39.2-1.fc40.aarch64 77/153
Installing : bzip2-1.0.8-16.fc39.aarch64 78/153
Installing : libxml2-2.11.5-1.fc40.aarch64 79/153
Installing : sqlite-libs-3.43.1-1.fc40.aarch64 80/153
Installing : ed-1.19-4.fc39.aarch64 81/153
Installing : patch-2.7.6-22.fc39.aarch64 82/153
Installing : elfutils-default-yama-scope-0.189-6.fc40.noarch 83/153
Running scriptlet: elfutils-default-yama-scope-0.189-6.fc40.noarch 83/153
Installing : libdb-5.3.28-58.fc40.aarch64 84/153
Installing : libgomp-13.2.1-1.fc40.aarch64 85/153
Installing : libnghttp2-1.56.0-1.fc40.aarch64 86/153
Installing : cpio-2.14-4.fc39.aarch64 87/153
Installing : diffutils-3.10-3.fc39.aarch64 88/153
Installing : gdbm-libs-1:1.23-4.fc39.aarch64 89/153
Installing : cyrus-sasl-lib-2.1.28-11.fc40.aarch64 90/153
Installing : keyutils-libs-1.6.1-7.fc39.aarch64 91/153
Installing : libbrotli-1.1.0-1.fc40.aarch64 92/153
Installing : libeconf-0.5.2-1.fc40.aarch64 93/153
Installing : shadow-utils-2:4.14.0-1.fc40.aarch64 94/153
Running scriptlet: libutempter-1.2.1-10.fc39.aarch64 95/153
Installing : libutempter-1.2.1-10.fc39.aarch64 95/153
Installing : libffi-3.4.4-4.fc39.aarch64 96/153
Installing : p11-kit-0.25.0-2.fc39.aarch64 97/153
Installing : libpkgconf-1.9.5-2.fc39.aarch64 98/153
Installing : pkgconf-1.9.5-2.fc39.aarch64 99/153
Installing : pkgconf-pkg-config-1.9.5-2.fc39.aarch64 100/153
Installing : libsigsegv-2.14-5.fc39.aarch64 101/153
Installing : gawk-5.2.2-2.fc39.aarch64 102/153
Installing : libtasn1-4.19.0-3.fc39.aarch64 103/153
Installing : p11-kit-trust-0.25.0-2.fc39.aarch64 104/153
Running scriptlet: p11-kit-trust-0.25.0-2.fc39.aarch64 104/153
Installing : libverto-0.3.2-6.fc39.aarch64 105/153
Installing : xxhash-libs-0.8.2-1.fc39.aarch64 106/153
Installing : kernel-srpm-macros-1.0-20.fc39.noarch 107/153
Installing : gnat-srpm-macros-6-3.fc39.noarch 108/153
Installing : ghc-srpm-macros-1.6.1-2.fc39.noarch 109/153
Installing : fpc-srpm-macros-1.3-8.fc39.noarch 110/153
Installing : coreutils-common-9.4-1.fc40.aarch64 111/153
Installing : openssl-libs-1:3.1.1-4.fc40.aarch64 112/153
Installing : coreutils-9.4-1.fc40.aarch64 113/153
Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 114/153
Installing : ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 114/153
Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 114/153
Installing : krb5-libs-1.21.2-1.fc40.aarch64 115/153
Installing : libtirpc-1.3.3-1.rc2.fc39.aarch64 116/153
Running scriptlet: authselect-libs-1.4.2-3.fc39.aarch64 117/153
Installing : authselect-libs-1.4.2-3.fc39.aarch64 117/153
Installing : gzip-1.12-6.fc39.aarch64 118/153
Installing : cracklib-2.9.11-2.fc40.aarch64 119/153
Installing : libpwquality-1.4.5-6.fc39.aarch64 120/153
Installing : authselect-1.4.2-3.fc39.aarch64 121/153
Installing : libnsl2-2.0.0-6.fc39.aarch64 122/153
Installing : pam-1.5.3-2.fc39.aarch64 123/153
Installing : libarchive-3.7.2-1.fc40.aarch64 124/153
Installing : libevent-2.1.12-9.fc39.aarch64 125/153
Installing : openldap-2.6.6-1.fc39.aarch64 126/153
Installing : rpm-sequoia-1.5.0-1.fc40.aarch64 127/153
Installing : rpm-libs-4.18.99-1.fc40.aarch64 128/153
Installing : ansible-srpm-macros-1-11.fc39.noarch 129/153
Installing : libssh-config-0.10.5-2.fc40.noarch 130/153
Installing : libssh-0.10.5-2.fc40.aarch64 131/153
Installing : libcurl-8.3.0-1.fc40.aarch64 132/153
Installing : elfutils-libs-0.189-6.fc40.aarch64 133/153
Installing : elfutils-debuginfod-client-0.189-6.fc40.aarch64 134/153
Installing : binutils-gold-2.41-5.fc40.aarch64 135/153
Running scriptlet: binutils-gold-2.41-5.fc40.aarch64 135/153
Installing : binutils-2.41-5.fc40.aarch64 136/153
Running scriptlet: binutils-2.41-5.fc40.aarch64 136/153
Installing : elfutils-0.189-6.fc40.aarch64 137/153
Installing : gdb-minimal-13.2-9.fc40.aarch64 138/153
Installing : debugedit-5.0-10.fc39.aarch64 139/153
Installing : rpm-build-libs-4.18.99-1.fc40.aarch64 140/153
Installing : curl-8.3.0-1.fc40.aarch64 141/153
Running scriptlet: rpm-4.18.99-1.fc40.aarch64 142/153
Installing : rpm-4.18.99-1.fc40.aarch64 142/153
Installing : efi-srpm-macros-5-9.fc39.noarch 143/153
Installing : lua-srpm-macros-1-9.fc39.noarch 144/153
Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 145/153
Installing : forge-srpm-macros-0.1.0-1.fc40.noarch 146/153
Installing : go-srpm-macros-3.2.0-7.fc40.noarch 147/153
Installing : python-srpm-macros-3.12-4.fc40.noarch 148/153
Installing : redhat-rpm-config-270-1.fc40.noarch 149/153
Installing : rpm-build-4.18.99-1.fc40.aarch64 150/153
Installing : util-linux-2.39.2-1.fc40.aarch64 151/153
Installing : which-2.21-40.fc39.aarch64 152/153
Installing : info-7.0.3-3.fc39.aarch64 153/153
Running scriptlet: filesystem-3.18-6.fc39.aarch64 153/153
Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 153/153
Running scriptlet: authselect-libs-1.4.2-3.fc39.aarch64 153/153
Running scriptlet: rpm-4.18.99-1.fc40.aarch64 153/153
Running scriptlet: info-7.0.3-3.fc39.aarch64 153/153
Verifying : cracklib-2.9.11-2.fc40.aarch64 1/153
Verifying : curl-8.3.0-1.fc40.aarch64 2/153
Verifying : cyrus-sasl-lib-2.1.28-11.fc40.aarch64 3/153
Verifying : file-5.45-1.fc40.aarch64 4/153
Verifying : file-libs-5.45-1.fc40.aarch64 5/153
Verifying : libarchive-3.7.2-1.fc40.aarch64 6/153
Verifying : libblkid-2.39.2-1.fc40.aarch64 7/153
Verifying : libcurl-8.3.0-1.fc40.aarch64 8/153
Verifying : libdb-5.3.28-58.fc40.aarch64 9/153
Verifying : libfdisk-2.39.2-1.fc40.aarch64 10/153
Verifying : libgcc-13.2.1-1.fc40.aarch64 11/153
Verifying : libgomp-13.2.1-1.fc40.aarch64 12/153
Verifying : libmount-2.39.2-1.fc40.aarch64 13/153
Verifying : libnghttp2-1.56.0-1.fc40.aarch64 14/153
Verifying : libsmartcols-2.39.2-1.fc40.aarch64 15/153
Verifying : libssh-0.10.5-2.fc40.aarch64 16/153
Verifying : libssh-config-0.10.5-2.fc40.noarch 17/153
Verifying : libstdc++-13.2.1-1.fc40.aarch64 18/153
Verifying : libuuid-2.39.2-1.fc40.aarch64 19/153
Verifying : libxml2-2.11.5-1.fc40.aarch64 20/153
Verifying : libzstd-1.5.5-4.fc40.aarch64 21/153
Verifying : openssl-libs-1:3.1.1-4.fc40.aarch64 22/153
Verifying : redhat-rpm-config-270-1.fc40.noarch 23/153
Verifying : rpm-4.18.99-1.fc40.aarch64 24/153
Verifying : rpm-build-4.18.99-1.fc40.aarch64 25/153
Verifying : rpm-build-libs-4.18.99-1.fc40.aarch64 26/153
Verifying : rpm-libs-4.18.99-1.fc40.aarch64 27/153
Verifying : util-linux-2.39.2-1.fc40.aarch64 28/153
Verifying : util-linux-core-2.39.2-1.fc40.aarch64 29/153
Verifying : zlib-ng-compat-2.1.3-4.fc40.aarch64 30/153
Verifying : zstd-1.5.5-4.fc40.aarch64 31/153
Verifying : alternatives-1.25-1.fc39.aarch64 32/153
Verifying : ansible-srpm-macros-1-11.fc39.noarch 33/153
Verifying : audit-libs-3.1.2-4.fc40.aarch64 34/153
Verifying : authselect-1.4.2-3.fc39.aarch64 35/153
Verifying : authselect-libs-1.4.2-3.fc39.aarch64 36/153
Verifying : basesystem-11-18.fc39.noarch 37/153
Verifying : bash-5.2.15-5.fc39.aarch64 38/153
Verifying : binutils-2.41-5.fc40.aarch64 39/153
Verifying : binutils-gold-2.41-5.fc40.aarch64 40/153
Verifying : bzip2-1.0.8-16.fc39.aarch64 41/153
Verifying : bzip2-libs-1.0.8-16.fc39.aarch64 42/153
Verifying : ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 43/153
Verifying : coreutils-9.4-1.fc40.aarch64 44/153
Verifying : coreutils-common-9.4-1.fc40.aarch64 45/153
Verifying : cpio-2.14-4.fc39.aarch64 46/153
Verifying : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 47/153
Verifying : debugedit-5.0-10.fc39.aarch64 48/153
Verifying : diffutils-3.10-3.fc39.aarch64 49/153
Verifying : dwz-0.15-3.fc39.aarch64 50/153
Verifying : ed-1.19-4.fc39.aarch64 51/153
Verifying : efi-srpm-macros-5-9.fc39.noarch 52/153
Verifying : elfutils-0.189-6.fc40.aarch64 53/153
Verifying : elfutils-debuginfod-client-0.189-6.fc40.aarch64 54/153
Verifying : elfutils-default-yama-scope-0.189-6.fc40.noarch 55/153
Verifying : elfutils-libelf-0.189-6.fc40.aarch64 56/153
Verifying : elfutils-libs-0.189-6.fc40.aarch64 57/153
Verifying : fedora-gpg-keys-40-0.1.noarch 58/153
Verifying : fedora-release-40-0.7.noarch 59/153
Verifying : fedora-release-common-40-0.7.noarch 60/153
Verifying : fedora-release-identity-basic-40-0.7.noarch 61/153
Verifying : fedora-repos-40-0.1.noarch 62/153
Verifying : fedora-repos-rawhide-40-0.1.noarch 63/153
Verifying : filesystem-3.18-6.fc39.aarch64 64/153
Verifying : findutils-1:4.9.0-6.fc40.aarch64 65/153
Verifying : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 66/153
Verifying : forge-srpm-macros-0.1.0-1.fc40.noarch 67/153
Verifying : fpc-srpm-macros-1.3-8.fc39.noarch 68/153
Verifying : gawk-5.2.2-2.fc39.aarch64 69/153
Verifying : gdb-minimal-13.2-9.fc40.aarch64 70/153
Verifying : gdbm-libs-1:1.23-4.fc39.aarch64 71/153
Verifying : ghc-srpm-macros-1.6.1-2.fc39.noarch 72/153
Verifying : glibc-2.38.9000-9.fc40.aarch64 73/153
Verifying : glibc-common-2.38.9000-9.fc40.aarch64 74/153
Verifying : glibc-gconv-extra-2.38.9000-9.fc40.aarch64 75/153
Verifying : glibc-minimal-langpack-2.38.9000-9.fc40.aarch64 76/153
Verifying : gmp-1:6.2.1-5.fc39.aarch64 77/153
Verifying : gnat-srpm-macros-6-3.fc39.noarch 78/153
Verifying : go-srpm-macros-3.2.0-7.fc40.noarch 79/153
Verifying : grep-3.11-5.fc40.aarch64 80/153
Verifying : gzip-1.12-6.fc39.aarch64 81/153
Verifying : info-7.0.3-3.fc39.aarch64 82/153
Verifying : jansson-2.13.1-7.fc39.aarch64 83/153
Verifying : kernel-srpm-macros-1.0-20.fc39.noarch 84/153
Verifying : keyutils-libs-1.6.1-7.fc39.aarch64 85/153
Verifying : krb5-libs-1.21.2-1.fc40.aarch64 86/153
Verifying : libacl-2.3.1-9.fc40.aarch64 87/153
Verifying : libattr-2.5.1-9.fc40.aarch64 88/153
Verifying : libbrotli-1.1.0-1.fc40.aarch64 89/153
Verifying : libcap-2.48-7.fc39.aarch64 90/153
Verifying : libcap-ng-0.8.3-8.fc40.aarch64 91/153
Verifying : libcom_err-1.47.0-2.fc39.aarch64 92/153
Verifying : libeconf-0.5.2-1.fc40.aarch64 93/153
Verifying : libevent-2.1.12-9.fc39.aarch64 94/153
Verifying : libffi-3.4.4-4.fc39.aarch64 95/153
Verifying : libidn2-2.3.4-3.fc39.aarch64 96/153
Verifying : libnsl2-2.0.0-6.fc39.aarch64 97/153
Verifying : libpkgconf-1.9.5-2.fc39.aarch64 98/153
Verifying : libpsl-0.21.2-4.fc39.aarch64 99/153
Verifying : libpwquality-1.4.5-6.fc39.aarch64 100/153
Verifying : libselinux-3.5-5.fc39.aarch64 101/153
Verifying : libsemanage-3.5-4.fc39.aarch64 102/153
Verifying : libsepol-3.5-2.fc39.aarch64 103/153
Verifying : libsigsegv-2.14-5.fc39.aarch64 104/153
Verifying : libtasn1-4.19.0-3.fc39.aarch64 105/153
Verifying : libtirpc-1.3.3-1.rc2.fc39.aarch64 106/153
Verifying : libunistring-1.1-5.fc40.aarch64 107/153
Verifying : libutempter-1.2.1-10.fc39.aarch64 108/153
Verifying : libverto-0.3.2-6.fc39.aarch64 109/153
Verifying : libxcrypt-4.4.36-2.fc39.aarch64 110/153
Verifying : lua-libs-5.4.6-3.fc39.aarch64 111/153
Verifying : lua-srpm-macros-1-9.fc39.noarch 112/153
Verifying : lz4-libs-1.9.4-4.fc39.aarch64 113/153
Verifying : mpfr-4.2.0-3.fc39.aarch64 114/153
Verifying : ncurses-base-6.4-7.20230520.fc40.noarch 115/153
Verifying : ncurses-libs-6.4-7.20230520.fc40.aarch64 116/153
Verifying : ocaml-srpm-macros-8-2.fc39.noarch 117/153
Verifying : openblas-srpm-macros-2-14.fc39.noarch 118/153
Verifying : openldap-2.6.6-1.fc39.aarch64 119/153
Verifying : p11-kit-0.25.0-2.fc39.aarch64 120/153
Verifying : p11-kit-trust-0.25.0-2.fc39.aarch64 121/153
Verifying : package-notes-srpm-macros-0.5-9.fc39.noarch 122/153
Verifying : pam-1.5.3-2.fc39.aarch64 123/153
Verifying : pam-libs-1.5.3-2.fc39.aarch64 124/153
Verifying : patch-2.7.6-22.fc39.aarch64 125/153
Verifying : pcre2-10.42-1.fc39.2.aarch64 126/153
Verifying : pcre2-syntax-10.42-1.fc39.2.noarch 127/153
Verifying : perl-srpm-macros-1-51.fc39.noarch 128/153
Verifying : pkgconf-1.9.5-2.fc39.aarch64 129/153
Verifying : pkgconf-m4-1.9.5-2.fc39.noarch 130/153
Verifying : pkgconf-pkg-config-1.9.5-2.fc39.aarch64 131/153
Verifying : popt-1.19-3.fc39.aarch64 132/153
Verifying : publicsuffix-list-dafsa-20230812-1.fc40.noarch 133/153
Verifying : pyproject-srpm-macros-1.9.0-2.fc39.noarch 134/153
Verifying : python-srpm-macros-3.12-4.fc40.noarch 135/153
Verifying : qt5-srpm-macros-5.15.10-2.fc39.noarch 136/153
Verifying : qt6-srpm-macros-6.5.2-2.fc39.noarch 137/153
Verifying : readline-8.2-4.fc39.aarch64 138/153
Verifying : rpm-sequoia-1.5.0-1.fc40.aarch64 139/153
Verifying : rust-srpm-macros-24-5.fc40.noarch 140/153
Verifying : sed-4.8-14.fc39.aarch64 141/153
Verifying : setup-2.14.4-1.fc39.noarch 142/153
Verifying : shadow-utils-2:4.14.0-1.fc40.aarch64 143/153
Verifying : sqlite-libs-3.43.1-1.fc40.aarch64 144/153
Verifying : systemd-libs-254.2-7.fc40.aarch64 145/153
Verifying : tar-2:1.35-2.fc40.aarch64 146/153
Verifying : tzdata-2023c-3.fc40.noarch 147/153
Verifying : unzip-6.0-62.fc39.aarch64 148/153
Verifying : which-2.21-40.fc39.aarch64 149/153
Verifying : xxhash-libs-0.8.2-1.fc39.aarch64 150/153
Verifying : xz-5.4.4-1.fc39.aarch64 151/153
Verifying : xz-libs-5.4.4-1.fc39.aarch64 152/153
Verifying : zip-3.0-39.fc40.aarch64 153/153
Installed:
alternatives-1.25-1.fc39.aarch64
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-4.fc40.aarch64
authselect-1.4.2-3.fc39.aarch64
authselect-libs-1.4.2-3.fc39.aarch64
basesystem-11-18.fc39.noarch
bash-5.2.15-5.fc39.aarch64
binutils-2.41-5.fc40.aarch64
binutils-gold-2.41-5.fc40.aarch64
bzip2-1.0.8-16.fc39.aarch64
bzip2-libs-1.0.8-16.fc39.aarch64
ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch
coreutils-9.4-1.fc40.aarch64
coreutils-common-9.4-1.fc40.aarch64
cpio-2.14-4.fc39.aarch64
cracklib-2.9.11-2.fc40.aarch64
crypto-policies-20230731-1.git5ed06e0.fc39.noarch
curl-8.3.0-1.fc40.aarch64
cyrus-sasl-lib-2.1.28-11.fc40.aarch64
debugedit-5.0-10.fc39.aarch64
diffutils-3.10-3.fc39.aarch64
dwz-0.15-3.fc39.aarch64
ed-1.19-4.fc39.aarch64
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.189-6.fc40.aarch64
elfutils-debuginfod-client-0.189-6.fc40.aarch64
elfutils-default-yama-scope-0.189-6.fc40.noarch
elfutils-libelf-0.189-6.fc40.aarch64
elfutils-libs-0.189-6.fc40.aarch64
fedora-gpg-keys-40-0.1.noarch
fedora-release-40-0.7.noarch
fedora-release-common-40-0.7.noarch
fedora-release-identity-basic-40-0.7.noarch
fedora-repos-40-0.1.noarch
fedora-repos-rawhide-40-0.1.noarch
file-5.45-1.fc40.aarch64
file-libs-5.45-1.fc40.aarch64
filesystem-3.18-6.fc39.aarch64
findutils-1:4.9.0-6.fc40.aarch64
fonts-srpm-macros-1:2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.aarch64
gdb-minimal-13.2-9.fc40.aarch64
gdbm-libs-1:1.23-4.fc39.aarch64
ghc-srpm-macros-1.6.1-2.fc39.noarch
glibc-2.38.9000-9.fc40.aarch64
glibc-common-2.38.9000-9.fc40.aarch64
glibc-gconv-extra-2.38.9000-9.fc40.aarch64
glibc-minimal-langpack-2.38.9000-9.fc40.aarch64
gmp-1:6.2.1-5.fc39.aarch64
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.2.0-7.fc40.noarch
grep-3.11-5.fc40.aarch64
gzip-1.12-6.fc39.aarch64
info-7.0.3-3.fc39.aarch64
jansson-2.13.1-7.fc39.aarch64
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.aarch64
krb5-libs-1.21.2-1.fc40.aarch64
libacl-2.3.1-9.fc40.aarch64
libarchive-3.7.2-1.fc40.aarch64
libattr-2.5.1-9.fc40.aarch64
libblkid-2.39.2-1.fc40.aarch64
libbrotli-1.1.0-1.fc40.aarch64
libcap-2.48-7.fc39.aarch64
libcap-ng-0.8.3-8.fc40.aarch64
libcom_err-1.47.0-2.fc39.aarch64
libcurl-8.3.0-1.fc40.aarch64
libdb-5.3.28-58.fc40.aarch64
libeconf-0.5.2-1.fc40.aarch64
libevent-2.1.12-9.fc39.aarch64
libfdisk-2.39.2-1.fc40.aarch64
libffi-3.4.4-4.fc39.aarch64
libgcc-13.2.1-1.fc40.aarch64
libgomp-13.2.1-1.fc40.aarch64
libidn2-2.3.4-3.fc39.aarch64
libmount-2.39.2-1.fc40.aarch64
libnghttp2-1.56.0-1.fc40.aarch64
libnsl2-2.0.0-6.fc39.aarch64
libpkgconf-1.9.5-2.fc39.aarch64
libpsl-0.21.2-4.fc39.aarch64
libpwquality-1.4.5-6.fc39.aarch64
libselinux-3.5-5.fc39.aarch64
libsemanage-3.5-4.fc39.aarch64
libsepol-3.5-2.fc39.aarch64
libsigsegv-2.14-5.fc39.aarch64
libsmartcols-2.39.2-1.fc40.aarch64
libssh-0.10.5-2.fc40.aarch64
libssh-config-0.10.5-2.fc40.noarch
libstdc++-13.2.1-1.fc40.aarch64
libtasn1-4.19.0-3.fc39.aarch64
libtirpc-1.3.3-1.rc2.fc39.aarch64
libunistring-1.1-5.fc40.aarch64
libutempter-1.2.1-10.fc39.aarch64
libuuid-2.39.2-1.fc40.aarch64
libverto-0.3.2-6.fc39.aarch64
libxcrypt-4.4.36-2.fc39.aarch64
libxml2-2.11.5-1.fc40.aarch64
libzstd-1.5.5-4.fc40.aarch64
lua-libs-5.4.6-3.fc39.aarch64
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.aarch64
mpfr-4.2.0-3.fc39.aarch64
ncurses-base-6.4-7.20230520.fc40.noarch
ncurses-libs-6.4-7.20230520.fc40.aarch64
ocaml-srpm-macros-8-2.fc39.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.aarch64
openssl-libs-1:3.1.1-4.fc40.aarch64
p11-kit-0.25.0-2.fc39.aarch64
p11-kit-trust-0.25.0-2.fc39.aarch64
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-2.fc39.aarch64
pam-libs-1.5.3-2.fc39.aarch64
patch-2.7.6-22.fc39.aarch64
pcre2-10.42-1.fc39.2.aarch64
pcre2-syntax-10.42-1.fc39.2.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.aarch64
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.aarch64
popt-1.19-3.fc39.aarch64
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.9.0-2.fc39.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.10-2.fc39.noarch
qt6-srpm-macros-6.5.2-2.fc39.noarch
readline-8.2-4.fc39.aarch64
redhat-rpm-config-270-1.fc40.noarch
rpm-4.18.99-1.fc40.aarch64
rpm-build-4.18.99-1.fc40.aarch64
rpm-build-libs-4.18.99-1.fc40.aarch64
rpm-libs-4.18.99-1.fc40.aarch64
rpm-sequoia-1.5.0-1.fc40.aarch64
rust-srpm-macros-24-5.fc40.noarch
sed-4.8-14.fc39.aarch64
setup-2.14.4-1.fc39.noarch
shadow-utils-2:4.14.0-1.fc40.aarch64
sqlite-libs-3.43.1-1.fc40.aarch64
systemd-libs-254.2-7.fc40.aarch64
tar-2:1.35-2.fc40.aarch64
tzdata-2023c-3.fc40.noarch
unzip-6.0-62.fc39.aarch64
util-linux-2.39.2-1.fc40.aarch64
util-linux-core-2.39.2-1.fc40.aarch64
which-2.21-40.fc39.aarch64
xxhash-libs-0.8.2-1.fc39.aarch64
xz-5.4.4-1.fc39.aarch64
xz-libs-5.4.4-1.fc39.aarch64
zip-3.0-39.fc40.aarch64
zlib-ng-compat-2.1.3-4.fc40.aarch64
zstd-1.5.5-4.fc40.aarch64
Complete!
Finish: installing minimal buildroot with dnf
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: alternatives-1.25-1.fc39.aarch64
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-4.fc40.aarch64
authselect-1.4.2-3.fc39.aarch64
authselect-libs-1.4.2-3.fc39.aarch64
basesystem-11-18.fc39.noarch
bash-5.2.15-5.fc39.aarch64
binutils-2.41-5.fc40.aarch64
binutils-gold-2.41-5.fc40.aarch64
bzip2-1.0.8-16.fc39.aarch64
bzip2-libs-1.0.8-16.fc39.aarch64
ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch
coreutils-9.4-1.fc40.aarch64
coreutils-common-9.4-1.fc40.aarch64
cpio-2.14-4.fc39.aarch64
cracklib-2.9.11-2.fc40.aarch64
crypto-policies-20230731-1.git5ed06e0.fc39.noarch
curl-8.3.0-1.fc40.aarch64
cyrus-sasl-lib-2.1.28-11.fc40.aarch64
debugedit-5.0-10.fc39.aarch64
diffutils-3.10-3.fc39.aarch64
dwz-0.15-3.fc39.aarch64
ed-1.19-4.fc39.aarch64
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.189-6.fc40.aarch64
elfutils-debuginfod-client-0.189-6.fc40.aarch64
elfutils-default-yama-scope-0.189-6.fc40.noarch
elfutils-libelf-0.189-6.fc40.aarch64
elfutils-libs-0.189-6.fc40.aarch64
fedora-gpg-keys-40-0.1.noarch
fedora-release-40-0.7.noarch
fedora-release-common-40-0.7.noarch
fedora-release-identity-basic-40-0.7.noarch
fedora-repos-40-0.1.noarch
fedora-repos-rawhide-40-0.1.noarch
file-5.45-1.fc40.aarch64
file-libs-5.45-1.fc40.aarch64
filesystem-3.18-6.fc39.aarch64
findutils-4.9.0-6.fc40.aarch64
fonts-srpm-macros-2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.aarch64
gdb-minimal-13.2-9.fc40.aarch64
gdbm-libs-1.23-4.fc39.aarch64
ghc-srpm-macros-1.6.1-2.fc39.noarch
glibc-2.38.9000-9.fc40.aarch64
glibc-common-2.38.9000-9.fc40.aarch64
glibc-gconv-extra-2.38.9000-9.fc40.aarch64
glibc-minimal-langpack-2.38.9000-9.fc40.aarch64
gmp-6.2.1-5.fc39.aarch64
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.2.0-7.fc40.noarch
gpg-pubkey-18b8e74c-62f2920f
gpg-pubkey-a15b79cc-63d04c2c
grep-3.11-5.fc40.aarch64
gzip-1.12-6.fc39.aarch64
info-7.0.3-3.fc39.aarch64
jansson-2.13.1-7.fc39.aarch64
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.aarch64
krb5-libs-1.21.2-1.fc40.aarch64
libacl-2.3.1-9.fc40.aarch64
libarchive-3.7.2-1.fc40.aarch64
libattr-2.5.1-9.fc40.aarch64
libblkid-2.39.2-1.fc40.aarch64
libbrotli-1.1.0-1.fc40.aarch64
libcap-2.48-7.fc39.aarch64
libcap-ng-0.8.3-8.fc40.aarch64
libcom_err-1.47.0-2.fc39.aarch64
libcurl-8.3.0-1.fc40.aarch64
libdb-5.3.28-58.fc40.aarch64
libeconf-0.5.2-1.fc40.aarch64
libevent-2.1.12-9.fc39.aarch64
libfdisk-2.39.2-1.fc40.aarch64
libffi-3.4.4-4.fc39.aarch64
libgcc-13.2.1-1.fc40.aarch64
libgomp-13.2.1-1.fc40.aarch64
libidn2-2.3.4-3.fc39.aarch64
libmount-2.39.2-1.fc40.aarch64
libnghttp2-1.56.0-1.fc40.aarch64
libnsl2-2.0.0-6.fc39.aarch64
libpkgconf-1.9.5-2.fc39.aarch64
libpsl-0.21.2-4.fc39.aarch64
libpwquality-1.4.5-6.fc39.aarch64
libselinux-3.5-5.fc39.aarch64
libsemanage-3.5-4.fc39.aarch64
libsepol-3.5-2.fc39.aarch64
libsigsegv-2.14-5.fc39.aarch64
libsmartcols-2.39.2-1.fc40.aarch64
libssh-0.10.5-2.fc40.aarch64
libssh-config-0.10.5-2.fc40.noarch
libstdc++-13.2.1-1.fc40.aarch64
libtasn1-4.19.0-3.fc39.aarch64
libtirpc-1.3.3-1.rc2.fc39.aarch64
libunistring-1.1-5.fc40.aarch64
libutempter-1.2.1-10.fc39.aarch64
libuuid-2.39.2-1.fc40.aarch64
libverto-0.3.2-6.fc39.aarch64
libxcrypt-4.4.36-2.fc39.aarch64
libxml2-2.11.5-1.fc40.aarch64
libzstd-1.5.5-4.fc40.aarch64
lua-libs-5.4.6-3.fc39.aarch64
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.aarch64
mpfr-4.2.0-3.fc39.aarch64
ncurses-base-6.4-7.20230520.fc40.noarch
ncurses-libs-6.4-7.20230520.fc40.aarch64
ocaml-srpm-macros-8-2.fc39.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.aarch64
openssl-libs-3.1.1-4.fc40.aarch64
p11-kit-0.25.0-2.fc39.aarch64
p11-kit-trust-0.25.0-2.fc39.aarch64
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-2.fc39.aarch64
pam-libs-1.5.3-2.fc39.aarch64
patch-2.7.6-22.fc39.aarch64
pcre2-10.42-1.fc39.2.aarch64
pcre2-syntax-10.42-1.fc39.2.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.aarch64
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.aarch64
popt-1.19-3.fc39.aarch64
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.9.0-2.fc39.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.10-2.fc39.noarch
qt6-srpm-macros-6.5.2-2.fc39.noarch
readline-8.2-4.fc39.aarch64
redhat-rpm-config-270-1.fc40.noarch
rpm-4.18.99-1.fc40.aarch64
rpm-build-4.18.99-1.fc40.aarch64
rpm-build-libs-4.18.99-1.fc40.aarch64
rpm-libs-4.18.99-1.fc40.aarch64
rpm-sequoia-1.5.0-1.fc40.aarch64
rust-srpm-macros-24-5.fc40.noarch
sed-4.8-14.fc39.aarch64
setup-2.14.4-1.fc39.noarch
shadow-utils-4.14.0-1.fc40.aarch64
sqlite-libs-3.43.1-1.fc40.aarch64
systemd-libs-254.2-7.fc40.aarch64
tar-1.35-2.fc40.aarch64
tzdata-2023c-3.fc40.noarch
unzip-6.0-62.fc39.aarch64
util-linux-2.39.2-1.fc40.aarch64
util-linux-core-2.39.2-1.fc40.aarch64
which-2.21-40.fc39.aarch64
xxhash-libs-0.8.2-1.fc39.aarch64
xz-5.4.4-1.fc39.aarch64
xz-libs-5.4.4-1.fc39.aarch64
zip-3.0-39.fc40.aarch64
zlib-ng-compat-2.1.3-4.fc40.aarch64
zstd-1.5.5-4.fc40.aarch64
Start: buildsrpm
Start: rpmbuild -bs
warning: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1689724800
Wrote: /builddir/build/SRPMS/R-Rhtslib-1.28.0-4.fc40.src.rpm
RPM build warnings:
%patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-aarch64-1695197320.022112/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-aarch64-1695197320.022112/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-aarch64-1695197320.022112/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-6gzvj33s/R-Rhtslib/R-Rhtslib.spec) Config(child) 1 minutes 3 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/R-Rhtslib-1.28.0-4.fc40.src.rpm) Config(fedora-rawhide-aarch64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1695197320.022112/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1695197320.022112/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1695197320.022112/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Finish: chroot init
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
rpm-4.18.99-1.fc40.aarch64
rpm-sequoia-1.5.0-1.fc40.aarch64
python3-dnf-4.16.2-4.fc40.noarch
python3-dnf-plugins-core-4.4.2-1.fc39.noarch
yum-4.16.2-4.fc40.noarch
Start: build phase for R-Rhtslib-1.28.0-4.fc40.src.rpm
Start: build setup for R-Rhtslib-1.28.0-4.fc40.src.rpm
warning: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1689724800
Wrote: /builddir/build/SRPMS/R-Rhtslib-1.28.0-4.fc40.src.rpm
RPM build warnings:
%patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 73 kB/s | 1.5 kB 00:00
fedora 85 kB/s | 11 kB 00:00
Dependencies resolved.
=========================================================================================
Package Arch Version Repo Size
=========================================================================================
Installing:
R-devel aarch64 4.3.1-3.fc40 copr_base 11 k
bzip2-devel aarch64 1.0.8-16.fc39 fedora 214 k
libcurl-devel aarch64 8.3.0-1.fc40 copr_base 901 k
xz-devel aarch64 5.4.4-1.fc39 fedora 66 k
zlib-ng-compat-devel aarch64 2.1.3-4.fc40 copr_base 34 k
Installing dependencies:
R-core aarch64 4.3.1-3.fc40 copr_base 61 M
R-core-devel aarch64 4.3.1-3.fc40 copr_base 86 k
R-java aarch64 4.3.1-3.fc40 copr_base 11 k
R-java-devel aarch64 4.3.1-3.fc40 copr_base 11 k
R-rpm-macros noarch 1.2.1-7.fc39 fedora 11 k
abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k
alsa-lib aarch64 1.2.10-3.fc40 fedora 511 k
annobin-docs noarch 12.26-1.fc40 fedora 94 k
annobin-plugin-gcc aarch64 12.26-1.fc40 fedora 958 k
avahi-libs aarch64 0.8-24.fc39 fedora 67 k
brotli aarch64 1.1.0-1.fc40 fedora 19 k
brotli-devel aarch64 1.1.0-1.fc40 fedora 34 k
cairo aarch64 1.17.8-5.fc40 copr_base 689 k
cmake-filesystem aarch64 3.27.4-8.fc40 fedora 19 k
copy-jdk-configs noarch 4.1-3.fc39 fedora 28 k
cpp aarch64 13.2.1-1.fc40 copr_base 9.7 M
crypto-policies-scripts noarch 20230731-1.git5ed06e0.fc39 fedora 115 k
cups-libs aarch64 1:2.4.6-6.fc40 copr_base 267 k
dbus-libs aarch64 1:1.14.10-1.fc40 fedora 156 k
default-fonts-core-sans noarch 4.0-9.fc40 fedora 32 k
desktop-file-utils aarch64 0.26-9.fc39 fedora 71 k
emacs-filesystem noarch 1:29.1-1.fc40 copr_base 8.9 k
expat aarch64 2.5.0-3.fc39 fedora 108 k
flexiblas aarch64 3.3.1-5.fc39 fedora 33 k
flexiblas-devel aarch64 3.3.1-5.fc39 fedora 116 k
flexiblas-netlib aarch64 3.3.1-5.fc39 fedora 2.6 M
flexiblas-netlib64 aarch64 3.3.1-5.fc39 fedora 2.5 M
flexiblas-openblas-openmp aarch64 3.3.1-5.fc39 fedora 16 k
flexiblas-openblas-openmp64 aarch64 3.3.1-5.fc39 fedora 16 k
fontconfig aarch64 2.14.2-5.fc40 fedora 301 k
fontconfig-devel aarch64 2.14.2-5.fc40 fedora 165 k
fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k
freetype aarch64 2.13.1-2.fc40 copr_base 406 k
freetype-devel aarch64 2.13.1-2.fc40 copr_base 913 k
fribidi aarch64 1.0.13-2.fc39 fedora 91 k
gc aarch64 8.2.2-4.fc39 fedora 110 k
gcc aarch64 13.2.1-1.fc40 copr_base 31 M
gcc-c++ aarch64 13.2.1-1.fc40 copr_base 12 M
gcc-gfortran aarch64 13.2.1-1.fc40 copr_base 11 M
gcc-plugin-annobin aarch64 13.2.1-1.fc40 copr_base 47 k
gettext aarch64 0.22-2.fc39 fedora 1.1 M
gettext-envsubst aarch64 0.22-2.fc39 fedora 36 k
gettext-libs aarch64 0.22-2.fc39 fedora 310 k
gettext-runtime aarch64 0.22-2.fc39 fedora 119 k
glib2 aarch64 2.78.0-2.fc40 fedora 2.8 M
glib2-devel aarch64 2.78.0-2.fc40 fedora 597 k
glibc-devel aarch64 2.38.9000-9.fc40 fedora 582 k
gnutls aarch64 3.8.1-1.fc40 fedora 1.0 M
google-noto-fonts-common noarch 20230801-3.fc40 fedora 17 k
google-noto-sans-vf-fonts noarch 20230801-3.fc40 fedora 583 k
graphite2 aarch64 1.3.14-12.fc39 fedora 93 k
graphite2-devel aarch64 1.3.14-12.fc39 fedora 20 k
guile22 aarch64 2.2.7-9.fc39 fedora 6.5 M
harfbuzz aarch64 8.2.0-1.fc40 fedora 933 k
harfbuzz-devel aarch64 8.2.0-1.fc40 fedora 450 k
harfbuzz-icu aarch64 8.2.0-1.fc40 fedora 17 k
java-17-openjdk aarch64 1:17.0.8.0.7-1.fc39 fedora 402 k
java-17-openjdk-devel aarch64 1:17.0.8.0.7-1.fc39 fedora 4.7 M
java-17-openjdk-headless aarch64 1:17.0.8.0.7-1.fc39 fedora 44 M
javapackages-filesystem noarch 6.2.0-3.fc40 fedora 12 k
jbigkit-libs aarch64 2.1-26.fc39 fedora 53 k
kernel-headers aarch64 6.6.0-0.rc2.git0.1.fc40 fedora 1.5 M
libICE aarch64 1.0.10-12.fc40 fedora 69 k
libRmath aarch64 4.3.1-3.fc40 copr_base 114 k
libRmath-devel aarch64 4.3.1-3.fc40 copr_base 16 k
libSM aarch64 1.2.3-14.fc40 fedora 41 k
libX11 aarch64 1.8.6-3.fc40 fedora 643 k
libX11-common noarch 1.8.6-3.fc40 fedora 175 k
libX11-devel aarch64 1.8.6-3.fc40 fedora 1.0 M
libX11-xcb aarch64 1.8.6-3.fc40 fedora 12 k
libXau aarch64 1.0.11-4.fc40 fedora 32 k
libXau-devel aarch64 1.0.11-4.fc40 fedora 14 k
libXcomposite aarch64 0.4.5-11.fc40 fedora 23 k
libXext aarch64 1.3.5-3.fc39 fedora 39 k
libXft aarch64 2.3.8-4.fc40 fedora 71 k
libXft-devel aarch64 2.3.8-4.fc40 fedora 50 k
libXi aarch64 1.8.1-3.fc40 fedora 39 k
libXmu aarch64 1.1.4-4.fc40 fedora 76 k
libXrender aarch64 0.9.11-4.fc40 fedora 27 k
libXrender-devel aarch64 0.9.11-4.fc40 fedora 19 k
libXt aarch64 1.2.1-6.fc40 fedora 176 k
libXtst aarch64 1.2.4-3.fc39 fedora 21 k
libasan aarch64 13.2.1-1.fc40 copr_base 455 k
libatomic aarch64 13.2.1-1.fc40 copr_base 36 k
libb2 aarch64 0.98.1-9.fc39 fedora 24 k
libblkid-devel aarch64 2.39.2-1.fc40 copr_base 18 k
libdatrie aarch64 0.2.13-7.fc39 fedora 32 k
libffi-devel aarch64 3.4.4-4.fc39 fedora 28 k
libfontenc aarch64 1.1.6-3.fc40 copr_base 33 k
libgfortran aarch64 13.2.1-1.fc40 copr_base 438 k
libicu aarch64 73.2-2.fc39 fedora 10 M
libicu-devel aarch64 73.2-2.fc39 fedora 925 k
libjpeg-turbo aarch64 2.1.4-3.fc39 fedora 196 k
liblerc aarch64 4.0.0-4.fc39 fedora 179 k
libmount-devel aarch64 2.39.2-1.fc40 copr_base 19 k
libmpc aarch64 1.3.1-3.fc39 fedora 72 k
libpng aarch64 2:1.6.37-15.fc39 fedora 115 k
libpng-devel aarch64 2:1.6.37-15.fc39 fedora 291 k
libselinux-devel aarch64 3.5-5.fc39 fedora 151 k
libsepol-devel aarch64 3.5-2.fc39 fedora 49 k
libstdc++-devel aarch64 13.2.1-1.fc40 copr_base 2.5 M
libthai aarch64 0.1.29-6.fc39 fedora 213 k
libtiff aarch64 4.4.0-8.fc40 copr_base 196 k
libtirpc-devel aarch64 1.3.3-1.rc2.fc39 fedora 125 k
libtool-ltdl aarch64 2.4.7-8.fc40 fedora 36 k
libubsan aarch64 13.2.1-1.fc40 copr_base 204 k
libwebp aarch64 1.3.2-1.fc40 fedora 243 k
libxcb aarch64 1.13.1-12.fc39 fedora 238 k
libxcb-devel aarch64 1.13.1-12.fc39 fedora 1.4 M
libxcrypt-devel aarch64 4.4.36-2.fc39 fedora 30 k
libxml2-devel aarch64 2.11.5-1.fc40 copr_base 498 k
lksctp-tools aarch64 1.0.19-4.fc39 fedora 93 k
lua aarch64 5.4.6-3.fc39 fedora 189 k
lua-posix aarch64 36.2.1-3.fc39 fedora 147 k
make aarch64 1:4.4.1-2.fc39 fedora 585 k
mkfontscale aarch64 1.2.2-4.fc40 copr_base 32 k
mpdecimal aarch64 2.5.1-7.fc39 fedora 90 k
nettle aarch64 3.9.1-2.fc39 fedora 434 k
nspr aarch64 4.35.0-13.fc40 copr_base 136 k
nss aarch64 3.93.0-2.fc40 copr_base 692 k
nss-softokn aarch64 3.93.0-2.fc40 copr_base 1.0 M
nss-softokn-freebl aarch64 3.93.0-2.fc40 copr_base 309 k
nss-sysinit aarch64 3.93.0-2.fc40 copr_base 19 k
nss-util aarch64 3.93.0-2.fc40 copr_base 86 k
openblas aarch64 0.3.21-6.fc39 fedora 35 k
openblas-openmp aarch64 0.3.21-6.fc39 fedora 3.7 M
openblas-openmp64 aarch64 0.3.21-6.fc39 fedora 3.7 M
pango aarch64 1.51.0-1.fc40 fedora 339 k
pcre2-devel aarch64 10.42-1.fc39.2 fedora 505 k
pcre2-utf16 aarch64 10.42-1.fc39.2 fedora 199 k
pcre2-utf32 aarch64 10.42-1.fc39.2 fedora 187 k
pixman aarch64 0.42.2-2.fc39 fedora 216 k
python-pip-wheel noarch 23.2.1-1.fc39 fedora 1.5 M
python3 aarch64 3.12.0~rc2-1.fc40 fedora 26 k
python3-libs aarch64 3.12.0~rc2-1.fc40 fedora 9.1 M
python3-setuptools noarch 67.7.2-7.fc40 fedora 1.5 M
sysprof-capture-devel aarch64 3.48.0-2.fc39 fedora 54 k
tcl aarch64 1:8.6.13-1.fc40 copr_base 1.1 M
tcl-devel aarch64 1:8.6.13-1.fc40 copr_base 164 k
tk aarch64 1:8.6.13-1.fc40 fedora 1.6 M
tk-devel aarch64 1:8.6.13-1.fc40 fedora 541 k
tre aarch64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 40 k
tre-common noarch 0.8.0-41.20140228gitc2f5d13.fc39 fedora 31 k
tre-devel aarch64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 12 k
ttmkfdir aarch64 3.0.9-69.fc40 copr_base 52 k
tzdata-java noarch 2023c-3.fc40 fedora 48 k
xdg-utils noarch 1.1.3-15.fc40 fedora 77 k
xml-common noarch 0.6.3-61.fc39 fedora 31 k
xorg-x11-fonts-Type1 noarch 7.5-36.fc39 fedora 504 k
xorg-x11-proto-devel noarch 2023.2-3.fc40 fedora 298 k
Transaction Summary
=========================================================================================
Install 155 Packages
Total download size: 253 M
Installed size: 856 M
Downloading Packages:
(1/155): R-devel-4.3.1-3.fc40.aarch64.rpm 332 kB/s | 11 kB 00:00
(2/155): R-core-devel-4.3.1-3.fc40.aarch64.rpm 2.5 MB/s | 86 kB 00:00
(3/155): R-java-4.3.1-3.fc40.aarch64.rpm 1.9 MB/s | 11 kB 00:00
(4/155): cairo-1.17.8-5.fc40.aarch64.rpm 150 MB/s | 689 kB 00:00
(5/155): R-java-devel-4.3.1-3.fc40.aarch64.rpm 981 kB/s | 11 kB 00:00
(6/155): cups-libs-2.4.6-6.fc40.aarch64.rpm 65 MB/s | 267 kB 00:00
(7/155): emacs-filesystem-29.1-1.fc40.noarch.rp 3.9 MB/s | 8.9 kB 00:00
(8/155): freetype-2.13.1-2.fc40.aarch64.rpm 125 MB/s | 406 kB 00:00
(9/155): cpp-13.2.1-1.fc40.aarch64.rpm 208 MB/s | 9.7 MB 00:00
(10/155): freetype-devel-2.13.1-2.fc40.aarch64. 64 MB/s | 913 kB 00:00
(11/155): gcc-13.2.1-1.fc40.aarch64.rpm 209 MB/s | 31 MB 00:00
(12/155): gcc-c++-13.2.1-1.fc40.aarch64.rpm 66 MB/s | 12 MB 00:00
(13/155): gcc-plugin-annobin-13.2.1-1.fc40.aarc 2.7 MB/s | 47 kB 00:00
(14/155): gcc-gfortran-13.2.1-1.fc40.aarch64.rp 168 MB/s | 11 MB 00:00
(15/155): libRmath-4.3.1-3.fc40.aarch64.rpm 5.3 MB/s | 114 kB 00:00
(16/155): libasan-13.2.1-1.fc40.aarch64.rpm 80 MB/s | 455 kB 00:00
(17/155): libatomic-13.2.1-1.fc40.aarch64.rpm 18 MB/s | 36 kB 00:00
(18/155): libRmath-devel-4.3.1-3.fc40.aarch64.r 1.4 MB/s | 16 kB 00:00
(19/155): libblkid-devel-2.39.2-1.fc40.aarch64. 4.4 MB/s | 18 kB 00:00
(20/155): libcurl-devel-8.3.0-1.fc40.aarch64.rp 199 MB/s | 901 kB 00:00
(21/155): libfontenc-1.1.6-3.fc40.aarch64.rpm 15 MB/s | 33 kB 00:00
(22/155): libgfortran-13.2.1-1.fc40.aarch64.rpm 157 MB/s | 438 kB 00:00
(23/155): libmount-devel-2.39.2-1.fc40.aarch64. 2.9 MB/s | 19 kB 00:00
(24/155): libtiff-4.4.0-8.fc40.aarch64.rpm 45 MB/s | 196 kB 00:00
(25/155): libstdc++-devel-13.2.1-1.fc40.aarch64 166 MB/s | 2.5 MB 00:00
(26/155): libubsan-13.2.1-1.fc40.aarch64.rpm 28 MB/s | 204 kB 00:00
(27/155): mkfontscale-1.2.2-4.fc40.aarch64.rpm 14 MB/s | 32 kB 00:00
(28/155): libxml2-devel-2.11.5-1.fc40.aarch64.r 113 MB/s | 498 kB 00:00
(29/155): nspr-4.35.0-13.fc40.aarch64.rpm 73 MB/s | 136 kB 00:00
(30/155): nss-softokn-3.93.0-2.fc40.aarch64.rpm 190 MB/s | 1.0 MB 00:00
(31/155): nss-softokn-freebl-3.93.0-2.fc40.aarc 134 MB/s | 309 kB 00:00
(32/155): nss-3.93.0-2.fc40.aarch64.rpm 65 MB/s | 692 kB 00:00
(33/155): nss-sysinit-3.93.0-2.fc40.aarch64.rpm 5.3 MB/s | 19 kB 00:00
(34/155): nss-util-3.93.0-2.fc40.aarch64.rpm 29 MB/s | 86 kB 00:00
(35/155): tcl-8.6.13-1.fc40.aarch64.rpm 143 MB/s | 1.1 MB 00:00
(36/155): tcl-devel-8.6.13-1.fc40.aarch64.rpm 19 MB/s | 164 kB 00:00
(37/155): ttmkfdir-3.0.9-69.fc40.aarch64.rpm 30 MB/s | 52 kB 00:00
(38/155): zlib-ng-compat-devel-2.1.3-4.fc40.aar 20 MB/s | 34 kB 00:00
(39/155): abattis-cantarell-vf-fonts-0.301-10.f 8.1 MB/s | 121 kB 00:00
(40/155): R-rpm-macros-1.2.1-7.fc39.noarch.rpm 380 kB/s | 11 kB 00:00
(41/155): alsa-lib-1.2.10-3.fc40.aarch64.rpm 36 MB/s | 511 kB 00:00
(42/155): annobin-docs-12.26-1.fc40.noarch.rpm 18 MB/s | 94 kB 00:00
(43/155): avahi-libs-0.8-24.fc39.aarch64.rpm 12 MB/s | 67 kB 00:00
(44/155): R-core-4.3.1-3.fc40.aarch64.rpm 127 MB/s | 61 MB 00:00
(45/155): annobin-plugin-gcc-12.26-1.fc40.aarch 14 MB/s | 958 kB 00:00
(46/155): brotli-1.1.0-1.fc40.aarch64.rpm 335 kB/s | 19 kB 00:00
(47/155): brotli-devel-1.1.0-1.fc40.aarch64.rpm 13 MB/s | 34 kB 00:00
(48/155): copy-jdk-configs-4.1-3.fc39.noarch.rp 11 MB/s | 28 kB 00:00
(49/155): cmake-filesystem-3.27.4-8.fc40.aarch6 4.4 MB/s | 19 kB 00:00
(50/155): bzip2-devel-1.0.8-16.fc39.aarch64.rpm 35 MB/s | 214 kB 00:00
(51/155): crypto-policies-scripts-20230731-1.gi 29 MB/s | 115 kB 00:00
(52/155): desktop-file-utils-0.26-9.fc39.aarch6 24 MB/s | 71 kB 00:00
(53/155): dbus-libs-1.14.10-1.fc40.aarch64.rpm 12 MB/s | 156 kB 00:00
(54/155): expat-2.5.0-3.fc39.aarch64.rpm 16 MB/s | 108 kB 00:00
(55/155): default-fonts-core-sans-4.0-9.fc40.no 2.6 MB/s | 32 kB 00:00
(56/155): flexiblas-3.3.1-5.fc39.aarch64.rpm 14 MB/s | 33 kB 00:00
(57/155): flexiblas-devel-3.3.1-5.fc39.aarch64. 16 MB/s | 116 kB 00:00
(58/155): flexiblas-openblas-openmp-3.3.1-5.fc3 5.4 MB/s | 16 kB 00:00
(59/155): flexiblas-openblas-openmp64-3.3.1-5.f 6.3 MB/s | 16 kB 00:00
(60/155): fontconfig-2.14.2-5.fc40.aarch64.rpm 29 MB/s | 301 kB 00:00
(61/155): fontconfig-devel-2.14.2-5.fc40.aarch6 50 MB/s | 165 kB 00:00
(62/155): fonts-filesystem-2.0.5-12.fc39.noarch 1.2 MB/s | 8.2 kB 00:00
(63/155): fribidi-1.0.13-2.fc39.aarch64.rpm 14 MB/s | 91 kB 00:00
(64/155): flexiblas-netlib-3.3.1-5.fc39.aarch64 54 MB/s | 2.6 MB 00:00
(65/155): flexiblas-netlib64-3.3.1-5.fc39.aarch 51 MB/s | 2.5 MB 00:00
(66/155): gc-8.2.2-4.fc39.aarch64.rpm 11 MB/s | 110 kB 00:00
(67/155): gettext-envsubst-0.22-2.fc39.aarch64. 9.1 MB/s | 36 kB 00:00
(68/155): gettext-libs-0.22-2.fc39.aarch64.rpm 55 MB/s | 310 kB 00:00
(69/155): gettext-runtime-0.22-2.fc39.aarch64.r 20 MB/s | 119 kB 00:00
(70/155): gettext-0.22-2.fc39.aarch64.rpm 36 MB/s | 1.1 MB 00:00
(71/155): glib2-devel-2.78.0-2.fc40.aarch64.rpm 28 MB/s | 597 kB 00:00
(72/155): gnutls-3.8.1-1.fc40.aarch64.rpm 78 MB/s | 1.0 MB 00:00
(73/155): google-noto-fonts-common-20230801-3.f 5.3 MB/s | 17 kB 00:00
(74/155): glibc-devel-2.38.9000-9.fc40.aarch64. 26 MB/s | 582 kB 00:00
(75/155): google-noto-sans-vf-fonts-20230801-3. 45 MB/s | 583 kB 00:00
(76/155): glib2-2.78.0-2.fc40.aarch64.rpm 46 MB/s | 2.8 MB 00:00
(77/155): graphite2-devel-1.3.14-12.fc39.aarch6 3.7 MB/s | 20 kB 00:00
(78/155): harfbuzz-8.2.0-1.fc40.aarch64.rpm 117 MB/s | 933 kB 00:00
(79/155): harfbuzz-devel-8.2.0-1.fc40.aarch64.r 86 MB/s | 450 kB 00:00
(80/155): harfbuzz-icu-8.2.0-1.fc40.aarch64.rpm 7.4 MB/s | 17 kB 00:00
(81/155): java-17-openjdk-17.0.8.0.7-1.fc39.aar 81 MB/s | 402 kB 00:00
(82/155): graphite2-1.3.14-12.fc39.aarch64.rpm 1.8 MB/s | 93 kB 00:00
(83/155): java-17-openjdk-headless-17.0.8.0.7-1 291 MB/s | 44 MB 00:00
(84/155): java-17-openjdk-devel-17.0.8.0.7-1.fc 27 MB/s | 4.7 MB 00:00
(85/155): javapackages-filesystem-6.2.0-3.fc40. 2.2 MB/s | 12 kB 00:00
(86/155): jbigkit-libs-2.1-26.fc39.aarch64.rpm 9.4 MB/s | 53 kB 00:00
(87/155): libICE-1.0.10-12.fc40.aarch64.rpm 21 MB/s | 69 kB 00:00
(88/155): libSM-1.2.3-14.fc40.aarch64.rpm 9.5 MB/s | 41 kB 00:00
(89/155): guile22-2.2.7-9.fc39.aarch64.rpm 29 MB/s | 6.5 MB 00:00
(90/155): kernel-headers-6.6.0-0.rc2.git0.1.fc4 46 MB/s | 1.5 MB 00:00
(91/155): libX11-devel-1.8.6-3.fc40.aarch64.rpm 187 MB/s | 1.0 MB 00:00
(92/155): libX11-xcb-1.8.6-3.fc40.aarch64.rpm 4.9 MB/s | 12 kB 00:00
(93/155): libXau-1.0.11-4.fc40.aarch64.rpm 10 MB/s | 32 kB 00:00
(94/155): libXau-devel-1.0.11-4.fc40.aarch64.rp 5.2 MB/s | 14 kB 00:00
(95/155): libXcomposite-0.4.5-11.fc40.aarch64.r 8.7 MB/s | 23 kB 00:00
(96/155): libXext-1.3.5-3.fc39.aarch64.rpm 8.2 MB/s | 39 kB 00:00
(97/155): libXft-2.3.8-4.fc40.aarch64.rpm 15 MB/s | 71 kB 00:00
(98/155): libXft-devel-2.3.8-4.fc40.aarch64.rpm 21 MB/s | 50 kB 00:00
(99/155): libXi-1.8.1-3.fc40.aarch64.rpm 16 MB/s | 39 kB 00:00
(100/155): libXmu-1.1.4-4.fc40.aarch64.rpm 30 MB/s | 76 kB 00:00
(101/155): libXrender-0.9.11-4.fc40.aarch64.rpm 8.5 MB/s | 27 kB 00:00
(102/155): libXrender-devel-0.9.11-4.fc40.aarch 8.2 MB/s | 19 kB 00:00
(103/155): libXt-1.2.1-6.fc40.aarch64.rpm 35 MB/s | 176 kB 00:00
(104/155): libXtst-1.2.4-3.fc39.aarch64.rpm 8.1 MB/s | 21 kB 00:00
(105/155): libb2-0.98.1-9.fc39.aarch64.rpm 8.0 MB/s | 24 kB 00:00
(106/155): libX11-common-1.8.6-3.fc40.noarch.rp 2.7 MB/s | 175 kB 00:00
(107/155): libffi-devel-3.4.4-4.fc39.aarch64.rp 7.3 MB/s | 28 kB 00:00
(108/155): libdatrie-0.2.13-7.fc39.aarch64.rpm 1.3 MB/s | 32 kB 00:00
(109/155): libicu-73.2-2.fc39.aarch64.rpm 285 MB/s | 10 MB 00:00
(110/155): libicu-devel-73.2-2.fc39.aarch64.rpm 34 MB/s | 925 kB 00:00
(111/155): liblerc-4.0.0-4.fc39.aarch64.rpm 19 MB/s | 179 kB 00:00
(112/155): libjpeg-turbo-2.1.4-3.fc39.aarch64.r 13 MB/s | 196 kB 00:00
(113/155): libmpc-1.3.1-3.fc39.aarch64.rpm 18 MB/s | 72 kB 00:00
(114/155): libpng-devel-1.6.37-15.fc39.aarch64. 92 MB/s | 291 kB 00:00
(115/155): libpng-1.6.37-15.fc39.aarch64.rpm 17 MB/s | 115 kB 00:00
(116/155): libselinux-devel-3.5-5.fc39.aarch64. 25 MB/s | 151 kB 00:00
(117/155): libsepol-devel-3.5-2.fc39.aarch64.rp 5.5 MB/s | 49 kB 00:00
(118/155): libthai-0.1.29-6.fc39.aarch64.rpm 28 MB/s | 213 kB 00:00
(119/155): libtool-ltdl-2.4.7-8.fc40.aarch64.rp 11 MB/s | 36 kB 00:00
(120/155): libwebp-1.3.2-1.fc40.aarch64.rpm 21 MB/s | 243 kB 00:00
(121/155): libtirpc-devel-1.3.3-1.rc2.fc39.aarc 7.0 MB/s | 125 kB 00:00
(122/155): libxcb-devel-1.13.1-12.fc39.aarch64. 221 MB/s | 1.4 MB 00:00
(123/155): libxcb-1.13.1-12.fc39.aarch64.rpm 28 MB/s | 238 kB 00:00
(124/155): lksctp-tools-1.0.19-4.fc39.aarch64.r 37 MB/s | 93 kB 00:00
(125/155): libxcrypt-devel-4.4.36-2.fc39.aarch6 8.3 MB/s | 30 kB 00:00
(126/155): lua-5.4.6-3.fc39.aarch64.rpm 55 MB/s | 189 kB 00:00
(127/155): lua-posix-36.2.1-3.fc39.aarch64.rpm 38 MB/s | 147 kB 00:00
(128/155): mpdecimal-2.5.1-7.fc39.aarch64.rpm 13 MB/s | 90 kB 00:00
(129/155): nettle-3.9.1-2.fc39.aarch64.rpm 82 MB/s | 434 kB 00:00
(130/155): openblas-0.3.21-6.fc39.aarch64.rpm 15 MB/s | 35 kB 00:00
(131/155): make-4.4.1-2.fc39.aarch64.rpm 28 MB/s | 585 kB 00:00
(132/155): openblas-openmp-0.3.21-6.fc39.aarch6 210 MB/s | 3.7 MB 00:00
(133/155): openblas-openmp64-0.3.21-6.fc39.aarc 167 MB/s | 3.7 MB 00:00
(134/155): pango-1.51.0-1.fc40.aarch64.rpm 37 MB/s | 339 kB 00:00
(135/155): pcre2-devel-10.42-1.fc39.2.aarch64.r 58 MB/s | 505 kB 00:00
(136/155): pcre2-utf16-10.42-1.fc39.2.aarch64.r 27 MB/s | 199 kB 00:00
(137/155): pixman-0.42.2-2.fc39.aarch64.rpm 32 MB/s | 216 kB 00:00
(138/155): pcre2-utf32-10.42-1.fc39.2.aarch64.r 23 MB/s | 187 kB 00:00
(139/155): python3-3.12.0~rc2-1.fc40.aarch64.rp 8.9 MB/s | 26 kB 00:00
(140/155): python-pip-wheel-23.2.1-1.fc39.noarc 50 MB/s | 1.5 MB 00:00
(141/155): libX11-1.8.6-3.fc40.aarch64.rpm 2.1 MB/s | 643 kB 00:00
(142/155): sysprof-capture-devel-3.48.0-2.fc39. 13 MB/s | 54 kB 00:00
(143/155): python3-setuptools-67.7.2-7.fc40.noa 42 MB/s | 1.5 MB 00:00
(144/155): tk-8.6.13-1.fc40.aarch64.rpm 155 MB/s | 1.6 MB 00:00
(145/155): tre-0.8.0-41.20140228gitc2f5d13.fc39 2.5 MB/s | 40 kB 00:00
(146/155): tk-devel-8.6.13-1.fc40.aarch64.rpm 20 MB/s | 541 kB 00:00
(147/155): tre-common-0.8.0-41.20140228gitc2f5d 2.2 MB/s | 31 kB 00:00
(148/155): tzdata-java-2023c-3.fc40.noarch.rpm 19 MB/s | 48 kB 00:00
(149/155): tre-devel-0.8.0-41.20140228gitc2f5d1 963 kB/s | 12 kB 00:00
(150/155): xml-common-0.6.3-61.fc39.noarch.rpm 8.4 MB/s | 31 kB 00:00
(151/155): xdg-utils-1.1.3-15.fc40.noarch.rpm 6.1 MB/s | 77 kB 00:00
(152/155): xorg-x11-fonts-Type1-7.5-36.fc39.noa 72 MB/s | 504 kB 00:00
(153/155): xorg-x11-proto-devel-2023.2-3.fc40.n 65 MB/s | 298 kB 00:00
(154/155): xz-devel-5.4.4-1.fc39.aarch64.rpm 11 MB/s | 66 kB 00:00
(155/155): python3-libs-3.12.0~rc2-1.fc40.aarch 1.9 MB/s | 9.1 MB 00:04
--------------------------------------------------------------------------------
Total 41 MB/s | 253 MB 00:06
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Running scriptlet: copy-jdk-configs-4.1-3.fc39.noarch 1/1
Running scriptlet: java-17-openjdk-headless-1:17.0.8.0.7-1.fc39.aarch64 1/1
Preparing : 1/1
Installing : zlib-ng-compat-devel-2.1.3-4.fc40.aarch64 1/155
Installing : nspr-4.35.0-13.fc40.aarch64 2/155
Installing : libgfortran-13.2.1-1.fc40.aarch64 3/155
Installing : nss-util-3.93.0-2.fc40.aarch64 4/155
Installing : xorg-x11-proto-devel-2023.2-3.fc40.noarch 5/155
Installing : libpng-2:1.6.37-15.fc39.aarch64 6/155
Installing : libmpc-1.3.1-3.fc39.aarch64 7/155
Installing : libicu-73.2-2.fc39.aarch64 8/155
Installing : fonts-filesystem-1:2.0.5-12.fc39.noarch 9/155
Installing : tcl-1:8.6.13-1.fc40.aarch64 10/155
Installing : tcl-devel-1:8.6.13-1.fc40.aarch64 11/155
Installing : libicu-devel-73.2-2.fc39.aarch64 12/155
Installing : xz-devel-5.4.4-1.fc39.aarch64 13/155
Installing : openblas-0.3.21-6.fc39.aarch64 14/155
Installing : libjpeg-turbo-2.1.4-3.fc39.aarch64 15/155
Installing : libXau-1.0.11-4.fc40.aarch64 16/155
Installing : libxcb-1.13.1-12.fc39.aarch64 17/155
Installing : libICE-1.0.10-12.fc40.aarch64 18/155
Installing : graphite2-1.3.14-12.fc39.aarch64 19/155
Installing : gettext-libs-0.22-2.fc39.aarch64 20/155
Installing : bzip2-devel-1.0.8-16.fc39.aarch64 21/155
Installing : libRmath-4.3.1-3.fc40.aarch64 22/155
Installing : libRmath-devel-4.3.1-3.fc40.aarch64 23/155
Installing : graphite2-devel-1.3.14-12.fc39.aarch64 24/155
Installing : libSM-1.2.3-14.fc40.aarch64 25/155
Installing : libXau-devel-1.0.11-4.fc40.aarch64 26/155
Installing : libxcb-devel-1.13.1-12.fc39.aarch64 27/155
Installing : openblas-openmp-0.3.21-6.fc39.aarch64 28/155
Installing : openblas-openmp64-0.3.21-6.fc39.aarch64 29/155
Installing : flexiblas-netlib64-3.3.1-5.fc39.aarch64 30/155
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Installing : flexiblas-openblas-openmp-3.3.1-5.fc39.aarch64 32/155
Installing : flexiblas-3.3.1-5.fc39.aarch64 33/155
Installing : flexiblas-openblas-openmp64-3.3.1-5.fc39.aarch64 34/155
Installing : flexiblas-devel-3.3.1-5.fc39.aarch64 35/155
Installing : abattis-cantarell-vf-fonts-0.301-10.fc39.noarch 36/155
Installing : cpp-13.2.1-1.fc40.aarch64 37/155
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R-core-4.3.1-3.fc40.aarch64
R-core-devel-4.3.1-3.fc40.aarch64
R-devel-4.3.1-3.fc40.aarch64
R-java-4.3.1-3.fc40.aarch64
R-java-devel-4.3.1-3.fc40.aarch64
R-rpm-macros-1.2.1-7.fc39.noarch
abattis-cantarell-vf-fonts-0.301-10.fc39.noarch
alsa-lib-1.2.10-3.fc40.aarch64
annobin-docs-12.26-1.fc40.noarch
annobin-plugin-gcc-12.26-1.fc40.aarch64
avahi-libs-0.8-24.fc39.aarch64
brotli-1.1.0-1.fc40.aarch64
brotli-devel-1.1.0-1.fc40.aarch64
bzip2-devel-1.0.8-16.fc39.aarch64
cairo-1.17.8-5.fc40.aarch64
cmake-filesystem-3.27.4-8.fc40.aarch64
copy-jdk-configs-4.1-3.fc39.noarch
cpp-13.2.1-1.fc40.aarch64
crypto-policies-scripts-20230731-1.git5ed06e0.fc39.noarch
cups-libs-1:2.4.6-6.fc40.aarch64
dbus-libs-1:1.14.10-1.fc40.aarch64
default-fonts-core-sans-4.0-9.fc40.noarch
desktop-file-utils-0.26-9.fc39.aarch64
emacs-filesystem-1:29.1-1.fc40.noarch
expat-2.5.0-3.fc39.aarch64
flexiblas-3.3.1-5.fc39.aarch64
flexiblas-devel-3.3.1-5.fc39.aarch64
flexiblas-netlib-3.3.1-5.fc39.aarch64
flexiblas-netlib64-3.3.1-5.fc39.aarch64
flexiblas-openblas-openmp-3.3.1-5.fc39.aarch64
flexiblas-openblas-openmp64-3.3.1-5.fc39.aarch64
fontconfig-2.14.2-5.fc40.aarch64
fontconfig-devel-2.14.2-5.fc40.aarch64
fonts-filesystem-1:2.0.5-12.fc39.noarch
freetype-2.13.1-2.fc40.aarch64
freetype-devel-2.13.1-2.fc40.aarch64
fribidi-1.0.13-2.fc39.aarch64
gc-8.2.2-4.fc39.aarch64
gcc-13.2.1-1.fc40.aarch64
gcc-c++-13.2.1-1.fc40.aarch64
gcc-gfortran-13.2.1-1.fc40.aarch64
gcc-plugin-annobin-13.2.1-1.fc40.aarch64
gettext-0.22-2.fc39.aarch64
gettext-envsubst-0.22-2.fc39.aarch64
gettext-libs-0.22-2.fc39.aarch64
gettext-runtime-0.22-2.fc39.aarch64
glib2-2.78.0-2.fc40.aarch64
glib2-devel-2.78.0-2.fc40.aarch64
glibc-devel-2.38.9000-9.fc40.aarch64
gnutls-3.8.1-1.fc40.aarch64
google-noto-fonts-common-20230801-3.fc40.noarch
google-noto-sans-vf-fonts-20230801-3.fc40.noarch
graphite2-1.3.14-12.fc39.aarch64
graphite2-devel-1.3.14-12.fc39.aarch64
guile22-2.2.7-9.fc39.aarch64
harfbuzz-8.2.0-1.fc40.aarch64
harfbuzz-devel-8.2.0-1.fc40.aarch64
harfbuzz-icu-8.2.0-1.fc40.aarch64
java-17-openjdk-1:17.0.8.0.7-1.fc39.aarch64
java-17-openjdk-devel-1:17.0.8.0.7-1.fc39.aarch64
java-17-openjdk-headless-1:17.0.8.0.7-1.fc39.aarch64
javapackages-filesystem-6.2.0-3.fc40.noarch
jbigkit-libs-2.1-26.fc39.aarch64
kernel-headers-6.6.0-0.rc2.git0.1.fc40.aarch64
libICE-1.0.10-12.fc40.aarch64
libRmath-4.3.1-3.fc40.aarch64
libRmath-devel-4.3.1-3.fc40.aarch64
libSM-1.2.3-14.fc40.aarch64
libX11-1.8.6-3.fc40.aarch64
libX11-common-1.8.6-3.fc40.noarch
libX11-devel-1.8.6-3.fc40.aarch64
libX11-xcb-1.8.6-3.fc40.aarch64
libXau-1.0.11-4.fc40.aarch64
libXau-devel-1.0.11-4.fc40.aarch64
libXcomposite-0.4.5-11.fc40.aarch64
libXext-1.3.5-3.fc39.aarch64
libXft-2.3.8-4.fc40.aarch64
libXft-devel-2.3.8-4.fc40.aarch64
libXi-1.8.1-3.fc40.aarch64
libXmu-1.1.4-4.fc40.aarch64
libXrender-0.9.11-4.fc40.aarch64
libXrender-devel-0.9.11-4.fc40.aarch64
libXt-1.2.1-6.fc40.aarch64
libXtst-1.2.4-3.fc39.aarch64
libasan-13.2.1-1.fc40.aarch64
libatomic-13.2.1-1.fc40.aarch64
libb2-0.98.1-9.fc39.aarch64
libblkid-devel-2.39.2-1.fc40.aarch64
libcurl-devel-8.3.0-1.fc40.aarch64
libdatrie-0.2.13-7.fc39.aarch64
libffi-devel-3.4.4-4.fc39.aarch64
libfontenc-1.1.6-3.fc40.aarch64
libgfortran-13.2.1-1.fc40.aarch64
libicu-73.2-2.fc39.aarch64
libicu-devel-73.2-2.fc39.aarch64
libjpeg-turbo-2.1.4-3.fc39.aarch64
liblerc-4.0.0-4.fc39.aarch64
libmount-devel-2.39.2-1.fc40.aarch64
libmpc-1.3.1-3.fc39.aarch64
libpng-2:1.6.37-15.fc39.aarch64
libpng-devel-2:1.6.37-15.fc39.aarch64
libselinux-devel-3.5-5.fc39.aarch64
libsepol-devel-3.5-2.fc39.aarch64
libstdc++-devel-13.2.1-1.fc40.aarch64
libthai-0.1.29-6.fc39.aarch64
libtiff-4.4.0-8.fc40.aarch64
libtirpc-devel-1.3.3-1.rc2.fc39.aarch64
libtool-ltdl-2.4.7-8.fc40.aarch64
libubsan-13.2.1-1.fc40.aarch64
libwebp-1.3.2-1.fc40.aarch64
libxcb-1.13.1-12.fc39.aarch64
libxcb-devel-1.13.1-12.fc39.aarch64
libxcrypt-devel-4.4.36-2.fc39.aarch64
libxml2-devel-2.11.5-1.fc40.aarch64
lksctp-tools-1.0.19-4.fc39.aarch64
lua-5.4.6-3.fc39.aarch64
lua-posix-36.2.1-3.fc39.aarch64
make-1:4.4.1-2.fc39.aarch64
mkfontscale-1.2.2-4.fc40.aarch64
mpdecimal-2.5.1-7.fc39.aarch64
nettle-3.9.1-2.fc39.aarch64
nspr-4.35.0-13.fc40.aarch64
nss-3.93.0-2.fc40.aarch64
nss-softokn-3.93.0-2.fc40.aarch64
nss-softokn-freebl-3.93.0-2.fc40.aarch64
nss-sysinit-3.93.0-2.fc40.aarch64
nss-util-3.93.0-2.fc40.aarch64
openblas-0.3.21-6.fc39.aarch64
openblas-openmp-0.3.21-6.fc39.aarch64
openblas-openmp64-0.3.21-6.fc39.aarch64
pango-1.51.0-1.fc40.aarch64
pcre2-devel-10.42-1.fc39.2.aarch64
pcre2-utf16-10.42-1.fc39.2.aarch64
pcre2-utf32-10.42-1.fc39.2.aarch64
pixman-0.42.2-2.fc39.aarch64
python-pip-wheel-23.2.1-1.fc39.noarch
python3-3.12.0~rc2-1.fc40.aarch64
python3-libs-3.12.0~rc2-1.fc40.aarch64
python3-setuptools-67.7.2-7.fc40.noarch
sysprof-capture-devel-3.48.0-2.fc39.aarch64
tcl-1:8.6.13-1.fc40.aarch64
tcl-devel-1:8.6.13-1.fc40.aarch64
tk-1:8.6.13-1.fc40.aarch64
tk-devel-1:8.6.13-1.fc40.aarch64
tre-0.8.0-41.20140228gitc2f5d13.fc39.aarch64
tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noarch
tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.aarch64
ttmkfdir-3.0.9-69.fc40.aarch64
tzdata-java-2023c-3.fc40.noarch
xdg-utils-1.1.3-15.fc40.noarch
xml-common-0.6.3-61.fc39.noarch
xorg-x11-fonts-Type1-7.5-36.fc39.noarch
xorg-x11-proto-devel-2023.2-3.fc40.noarch
xz-devel-5.4.4-1.fc39.aarch64
zlib-ng-compat-devel-2.1.3-4.fc40.aarch64
Complete!
Finish: build setup for R-Rhtslib-1.28.0-4.fc40.src.rpm
Start: rpmbuild R-Rhtslib-1.28.0-4.fc40.src.rpm
warning: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1689724800
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.o8vFLP
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf Rhtslib
+ /usr/bin/mkdir -p Rhtslib
+ cd Rhtslib
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/Rhtslib_1.28.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ rm -rf /builddir/build/BUILD/Rhtslib-SPECPARTS
+ /usr/bin/mkdir -p /builddir/build/BUILD/Rhtslib-SPECPARTS
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ echo 'Patch #0 (R-Rhtslib-zlibbioc.patch):'
Patch #0 (R-Rhtslib-zlibbioc.patch):
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .zlibbioc --fuzz=0
patching file Rhtslib/DESCRIPTION
patching file Rhtslib/NAMESPACE
Patch #1 (R-Rhtslib-buildroot-fix.patch):
+ echo 'Patch #1 (R-Rhtslib-buildroot-fix.patch):'
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fix --fuzz=0
patching file Rhtslib/src/Makevars.common
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.g2KLWU
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Rhtslib
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.BwP5ZR
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64
++ dirname /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Rhtslib
+ mkdir -p /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library
+ R CMD INSTALL -l /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library Rhtslib
* installing *source* package ‘Rhtslib’ ...
** using non-staged installation via StagedInstall field
** libs
using C compiler: ‘gcc (GCC) 13.2.1 20230728 (Red Hat 13.2.1-1)’
cd "htslib-1.7" && make -f "/usr/lib64/R/etc/Makeconf" -f "Makefile.Rhtslib"
make[1]: Entering directory '/builddir/build/BUILD/Rhtslib/Rhtslib/src/htslib-1.7'
Makefile.Rhtslib:131: warning: overriding recipe for target '.c.o'
/usr/lib64/R/etc/Makeconf:191: warning: ignoring old recipe for target '.c.o'
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kfunc.o kfunc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o knetfile.o knetfile.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kstring.o kstring.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bcf_sr_sort.o bcf_sr_sort.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bgzf.o bgzf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o errmod.o errmod.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o faidx.o faidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile.o hfile.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_net.o hfile_net.c
echo '#define HTS_VERSION "1.7"' > version.h
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts.o hts.c
hts.c: In function ‘hts_idx_init’:
hts.c:1366:59: warning: overflow in conversion from ‘uint32_t’ {aka ‘unsigned int’} to ‘int’ changes value from ‘idx->z.last_bin = 4294967295’ to ‘-1’ [-Woverflow]
1366 | idx->z.save_bin = idx->z.save_tid = idx->z.last_tid = idx->z.last_bin = 0xffffffffu;
| ^~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts_os.o hts_os.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o md5.o md5.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o multipart.o multipart.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o probaln.o probaln.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o realn.o realn.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o regidx.o regidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o sam.o sam.c
sam.c: In function ‘bam_hdr_write’:
sam.c:233:5: warning: ‘strncpy’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation]
233 | strncpy(buf, "BAM\1", 4);
| ^
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o synced_bcf_reader.o synced_bcf_reader.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf_sweep.o vcf_sweep.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o tbx.o tbx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o textutils.o textutils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o thread_pool.o thread_pool.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf.o vcf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcfutils.o vcfutils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_codecs.o cram/cram_codecs.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_decode.o cram/cram_decode.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_encode.o cram/cram_encode.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_external.o cram/cram_external.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_index.o cram/cram_index.c
In file included from ./textutils_internal.h:32,
from ./hts_internal.h:31,
from cram/cram_index.c:65:
In function ‘kputsn’,
inlined from ‘kputs’ at ./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
./htslib/kstring.h:150:20: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
150 | s->s[s->l] = 0;
| ~~~~~~~~~~~^~~
In file included from /usr/include/string.h:548,
from cram/cram_index.c:57:
In function ‘memcpy’,
inlined from ‘kputsn’ at ./htslib/kstring.h:148:2,
inlined from ‘kputs’ at ./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
/usr/include/bits/string_fortified.h:29:10: warning: ‘memcpy’ specified bound 18446744073709551614 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
30 | __glibc_objsize0 (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_io.o cram/cram_io.c
cram/cram_io.c: In function ‘cram_populate_ref’:
cram/cram_io.c:2071:9: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
2071 | strncpy(path, path2, PATH_MAX);
| ^
cram/cram_io.c:2178:34: warning: ‘.tmp_’ directive writing 5 bytes into a region of size between 1 and 4096 [-Wformat-overflow=]
2178 | sprintf(path_tmp, "%s.tmp_%d_%u_%u", path, pid, thrid, t);
| ^~~~~
In file included from /usr/include/stdio.h:964,
from cram/cram_io.c:49:
In function ‘sprintf’,
inlined from ‘cram_populate_ref’ at cram/cram_io.c:2178:6:
/usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 11 and 4134 bytes into a destination of size 4096
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
cram/cram_io.c: In function ‘cram_write_SAM_hdr’:
cram/cram_io.c:3677:13: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
3677 | strncpy(out, in, PATH_MAX);
| ^
cram/cram_io.c: In function ‘cram_dopen’:
cram/cram_io.c:4055:9: warning: ‘strncpy’ specified bound 20 equals destination size [-Wstringop-truncation]
4055 | strncpy(def->file_id, filename, 20);
| ^
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_samtools.o cram/cram_samtools.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_stats.o cram/cram_stats.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/files.o cram/files.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/mFILE.o cram/mFILE.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/open_trace_file.o cram/open_trace_file.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/pooled_alloc.o cram/pooled_alloc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/rANS_static.o cram/rANS_static.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/sam_header.o cram/sam_header.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/string_alloc.o cram/string_alloc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_libcurl.o hfile_libcurl.c
hfile_libcurl.c: In function ‘libcurl_open’:
hfile_libcurl.c:1187:9: warning: ‘CURLINFO_CONTENT_LENGTH_DOWNLOAD’ is deprecated: since 7.55.0. Use CURLINFO_CONTENT_LENGTH_DOWNLOAD_T [-Wdeprecated-declarations]
1187 | if (curl_easy_getinfo(fp->easy, CURLINFO_CONTENT_LENGTH_DOWNLOAD,
| ^~
In file included from hfile_libcurl.c:45:
/usr/include/curl/curl.h:2883:3: note: declared here
2883 | CURLINFO_CONTENT_LENGTH_DOWNLOAD
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ar -rc libhts.a kfunc.o knetfile.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o hfile.o hfile_net.o hts.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o sam.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_samtools.o cram/cram_stats.o cram/files.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/rANS_static.o cram/sam_header.o cram/string_alloc.o hfile_libcurl.o
ranlib libhts.a
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kfunc.pico kfunc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o knetfile.pico knetfile.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kstring.pico kstring.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bcf_sr_sort.pico bcf_sr_sort.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bgzf.pico bgzf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o errmod.pico errmod.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o faidx.pico faidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile.pico hfile.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_net.pico hfile_net.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts.pico hts.c
hts.c: In function ‘hts_idx_init’:
hts.c:1366:59: warning: overflow in conversion from ‘uint32_t’ {aka ‘unsigned int’} to ‘int’ changes value from ‘idx->z.last_bin = 4294967295’ to ‘-1’ [-Woverflow]
1366 | idx->z.save_bin = idx->z.save_tid = idx->z.last_tid = idx->z.last_bin = 0xffffffffu;
| ^~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts_os.pico hts_os.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o md5.pico md5.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o multipart.pico multipart.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o probaln.pico probaln.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o realn.pico realn.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o regidx.pico regidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o sam.pico sam.c
sam.c: In function ‘bam_hdr_write’:
sam.c:233:5: warning: ‘strncpy’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation]
233 | strncpy(buf, "BAM\1", 4);
| ^
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o synced_bcf_reader.pico synced_bcf_reader.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf_sweep.pico vcf_sweep.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o tbx.pico tbx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o textutils.pico textutils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o thread_pool.pico thread_pool.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf.pico vcf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcfutils.pico vcfutils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_codecs.pico cram/cram_codecs.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_decode.pico cram/cram_decode.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_encode.pico cram/cram_encode.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_external.pico cram/cram_external.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_index.pico cram/cram_index.c
In file included from ./textutils_internal.h:32,
from ./hts_internal.h:31,
from cram/cram_index.c:65:
In function ‘kputsn’,
inlined from ‘kputs’ at ./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
./htslib/kstring.h:150:20: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
150 | s->s[s->l] = 0;
| ~~~~~~~~~~~^~~
In file included from /usr/include/string.h:548,
from cram/cram_index.c:57:
In function ‘memcpy’,
inlined from ‘kputsn’ at ./htslib/kstring.h:148:2,
inlined from ‘kputs’ at ./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
/usr/include/bits/string_fortified.h:29:10: warning: ‘memcpy’ specified bound 18446744073709551614 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
30 | __glibc_objsize0 (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_io.pico cram/cram_io.c
cram/cram_io.c: In function ‘cram_populate_ref’:
cram/cram_io.c:2071:9: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
2071 | strncpy(path, path2, PATH_MAX);
| ^
cram/cram_io.c:2178:34: warning: ‘.tmp_’ directive writing 5 bytes into a region of size between 1 and 4096 [-Wformat-overflow=]
2178 | sprintf(path_tmp, "%s.tmp_%d_%u_%u", path, pid, thrid, t);
| ^~~~~
In file included from /usr/include/stdio.h:964,
from cram/cram_io.c:49:
In function ‘sprintf’,
inlined from ‘cram_populate_ref’ at cram/cram_io.c:2178:6:
/usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 11 and 4134 bytes into a destination of size 4096
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
cram/cram_io.c: In function ‘cram_write_SAM_hdr’:
cram/cram_io.c:3677:13: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
3677 | strncpy(out, in, PATH_MAX);
| ^
cram/cram_io.c: In function ‘cram_dopen’:
cram/cram_io.c:4055:9: warning: ‘strncpy’ specified bound 20 equals destination size [-Wstringop-truncation]
4055 | strncpy(def->file_id, filename, 20);
| ^
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_samtools.pico cram/cram_samtools.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_stats.pico cram/cram_stats.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/files.pico cram/files.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/mFILE.pico cram/mFILE.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/open_trace_file.pico cram/open_trace_file.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/pooled_alloc.pico cram/pooled_alloc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/rANS_static.pico cram/rANS_static.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/sam_header.pico cram/sam_header.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/string_alloc.pico cram/string_alloc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_libcurl.pico hfile_libcurl.c
hfile_libcurl.c: In function ‘libcurl_open’:
hfile_libcurl.c:1187:9: warning: ‘CURLINFO_CONTENT_LENGTH_DOWNLOAD’ is deprecated: since 7.55.0. Use CURLINFO_CONTENT_LENGTH_DOWNLOAD_T [-Wdeprecated-declarations]
1187 | if (curl_easy_getinfo(fp->easy, CURLINFO_CONTENT_LENGTH_DOWNLOAD,
| ^~
In file included from hfile_libcurl.c:45:
/usr/include/curl/curl.h:2883:3: note: declared here
2883 | CURLINFO_CONTENT_LENGTH_DOWNLOAD
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -shared -Wl,-soname,libhts.so.2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libhts.so kfunc.pico knetfile.pico kstring.pico bcf_sr_sort.pico bgzf.pico errmod.pico faidx.pico hfile.pico hfile_net.pico hts.pico hts_os.pico md5.pico multipart.pico probaln.pico realn.pico regidx.pico sam.pico synced_bcf_reader.pico vcf_sweep.pico tbx.pico textutils.pico thread_pool.pico vcf.pico vcfutils.pico cram/cram_codecs.pico cram/cram_decode.pico cram/cram_encode.pico cram/cram_external.pico cram/cram_index.pico cram/cram_io.pico cram/cram_samtools.pico cram/cram_stats.pico cram/files.pico cram/mFILE.pico cram/open_trace_file.pico cram/pooled_alloc.pico cram/rANS_static.pico cram/sam_header.pico cram/string_alloc.pico hfile_libcurl.pico -lz -lm -lbz2 -llzma -lcurl -lpthread
In function ‘kputsn’,
inlined from ‘kputs’ at htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
htslib/kstring.h:150:20: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
150 | s->s[s->l] = 0;
| ^
In function ‘memcpy’,
inlined from ‘kputsn’ at htslib/kstring.h:148:2,
inlined from ‘kputs’ at htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
/usr/include/bits/string_fortified.h:29:10: warning: ‘__builtin_memcpy’ specified bound 18446744073709551614 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^
ln -sf libhts.so libhts.so.2
make[1]: Leaving directory '/builddir/build/BUILD/Rhtslib/Rhtslib/src/htslib-1.7'
mkdir -p "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/include/htslib"
cd "htslib-1.7/htslib" && cp * "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/include/htslib" && cd .. && cp textutils_internal.h hts_internal.h "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/include"
gcc -I"/usr/include/R" -DNDEBUG -D_FILE_OFFSET_BITS=64 -Ihtslib-1.7 -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_init_Rhtslib.c -o R_init_Rhtslib.o
mkdir -p "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/usrlib"
cd "htslib-1.7" && cp libhts.so libhts.a "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/usrlib"
cd "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/usrlib" && ln -s libhts.so libhts.so.2
gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o Rhtslib.so R_init_Rhtslib.o /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/usrlib/libhts.a -lcurl -L/usr/lib64/R/lib -lR
In function ‘kputsn’,
inlined from ‘kputs’ at htslib-1.7/./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at htslib-1.7/cram/cram_index.c:571:9:
htslib-1.7/./htslib/kstring.h:150:20: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
150 | s->s[s->l] = 0;
| ^
In function ‘memcpy’,
inlined from ‘kputsn’ at htslib-1.7/./htslib/kstring.h:148:2,
inlined from ‘kputs’ at htslib-1.7/./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at htslib-1.7/cram/cram_index.c:571:9:
/usr/include/bits/string_fortified.h:29:10: warning: ‘__builtin_memcpy’ specified bound 18446744073709551614 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^
mkdir -p "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/testdata/tabix"
cd "htslib-1.7/test" && (cp *.sam *.bam *.vcf *.bcf *.cram *.fa *.fa.fai *.gff *.bed "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/testdata" 2>/dev/null || true) && cd tabix && (cp *.sam *.bam *.vcf *.bcf *.cram *.fa *.fa.fai *.gff *.bed "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/testdata/tabix" 2>/dev/null || true)
installing to /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/Rhtslib/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘Rhtslib’
finding HTML links ... done
Rhtslib-package html
pkgconfig html
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (Rhtslib)
+ test -d Rhtslib/src
+ cd Rhtslib/src
+ rm -f R_init_Rhtslib.o Rhtslib.so
+ rm -f /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64/usr/lib64/R/library/R.css
+ /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.28.0-4.fc40 --unique-debug-suffix -1.28.0-4.fc40.aarch64 --unique-debug-src-base R-Rhtslib-1.28.0-4.fc40.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/Rhtslib
find-debuginfo: starting
Extracting debug info from 2 files
DWARF-compressing 2 files
sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/R-Rhtslib-1.28.0-4.fc40.aarch64
3112 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.rrRE47
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Rhtslib
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: R-Rhtslib-1.28.0-4.fc40.aarch64
Provides: R(Rhtslib) = 1.28.0 R-Rhtslib = 1.28.0-4.fc40 R-Rhtslib(aarch-64) = 1.28.0-4.fc40 libhts.so.2()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: R(ABI) = 4.3 R-core ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libR.so()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libcurl.so.4()(64bit) liblzma.so.5()(64bit) liblzma.so.5(XZ_5.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) libz.so.1()(64bit) libz.so.1(ZLIB_1.2.0)(64bit) rtld(GNU_HASH)
Suggests: R(BiocStyle) R(knitr) R(rmarkdown)
Processing files: R-Rhtslib-devel-1.28.0-4.fc40.aarch64
Provides: R-Rhtslib-devel = 1.28.0-4.fc40 R-Rhtslib-devel(aarch-64) = 1.28.0-4.fc40 R-Rhtslib-static = 1.28.0-4.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-Rhtslib-debugsource-1.28.0-4.fc40.aarch64
Provides: R-Rhtslib-debugsource = 1.28.0-4.fc40 R-Rhtslib-debugsource(aarch-64) = 1.28.0-4.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-Rhtslib-debuginfo-1.28.0-4.fc40.aarch64
Provides: R-Rhtslib-debuginfo = 1.28.0-4.fc40 R-Rhtslib-debuginfo(aarch-64) = 1.28.0-4.fc40 debuginfo(build-id) = 3df07b3a326099fdc15a485eef751686dbd277f9 debuginfo(build-id) = e3e627e16e79516194c38cc44b09220acf4b3319 libhts.so-1.28.0-4.fc40.aarch64.debug()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: R-Rhtslib-debugsource(aarch-64) = 1.28.0-4.fc40
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64
Wrote: /builddir/build/RPMS/R-Rhtslib-devel-1.28.0-4.fc40.aarch64.rpm
Wrote: /builddir/build/RPMS/R-Rhtslib-debugsource-1.28.0-4.fc40.aarch64.rpm
Wrote: /builddir/build/RPMS/R-Rhtslib-debuginfo-1.28.0-4.fc40.aarch64.rpm
Wrote: /builddir/build/RPMS/R-Rhtslib-1.28.0-4.fc40.aarch64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.3bWNRM
+ umask 022
+ cd /builddir/build/BUILD
+ cd Rhtslib
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.aarch64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.rfGPvl
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf /builddir/build/BUILD/Rhtslib-SPECPARTS
+ rm -rf Rhtslib Rhtslib.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
RPM build warnings:
%patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Finish: rpmbuild R-Rhtslib-1.28.0-4.fc40.src.rpm
Finish: build phase for R-Rhtslib-1.28.0-4.fc40.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-aarch64-1695197320.022112/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-aarch64-1695197320.022112/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-aarch64-1695197320.022112/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/R-Rhtslib-1.28.0-4.fc40.src.rpm) Config(child) 1 minutes 19 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
"packages": [
{
"name": "R-Rhtslib",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "src"
},
{
"name": "R-Rhtslib-debugsource",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "aarch64"
},
{
"name": "R-Rhtslib",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "aarch64"
},
{
"name": "R-Rhtslib-devel",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "aarch64"
},
{
"name": "R-Rhtslib-debuginfo",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "aarch64"
}
]
}
RPMResults finished